AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0044940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044940 MtrunA17_Chr1g0211691 88.013 951 88 5 1 926 1 950 0.0 1590
Msa0044940 MtrunA17_Chr1g0211711 71.040 1067 193 14 42 1014 7 1051 0.0 1456
Msa0044940 MtrunA17_Chr1g0183311 69.059 850 184 7 234 1014 43 882 0.0 1145
Msa0044940 MtrunA17_Chr5g0426961 67.750 769 205 8 270 1013 84 834 0.0 1030
Msa0044940 MtrunA17_Chr1g0211661 71.535 671 159 7 304 954 207 865 0.0 973
Msa0044940 MtrunA17_Chr1g0211661 80.833 120 23 0 1 120 1 120 5.79e-49 188
Msa0044940 MtrunA17_Chr5g0420361 63.314 676 204 11 385 1023 138 806 0.0 841
Msa0044940 MtrunA17_Chr6g0472441 60.231 694 194 15 385 1037 80 732 0.0 800
Msa0044940 MtrunA17_Chr5g0448301 60.329 547 181 6 379 920 93 608 0.0 627
Msa0044940 MtrunA17_Chr5g0448301 38.857 175 58 8 26 189 7 143 5.74e-12 70.1
Msa0044940 MtrunA17_Chr7g0275771 40.741 945 413 25 184 1019 24 930 0.0 618
Msa0044940 MtrunA17_Chr4g0075261 43.158 760 321 17 311 1011 157 864 0.0 573
Msa0044940 MtrunA17_Chr2g0289121 44.799 721 322 13 316 1011 150 819 0.0 560
Msa0044940 MtrunA17_Chr1g0192011 35.040 742 390 16 322 1015 267 964 2.39e-136 437
Msa0044940 MtrunA17_Chr1g0147021 44.673 535 259 10 316 845 864 1366 2.44e-130 434
Msa0044940 MtrunA17_Chr1g0147021 52.542 177 61 3 886 1039 1551 1727 2.30e-44 176
Msa0044940 MtrunA17_Chr2g0289031 49.877 405 162 5 628 1011 9 393 1.09e-119 373
Msa0044940 MtrunA17_Chr2g0281051 32.943 768 401 18 322 1003 207 946 1.67e-116 383
Msa0044940 MtrunA17_Chr8g0364421 50.000 256 96 4 432 686 5 229 7.73e-70 233
Msa0044940 MtrunA17_Chr7g0231061 59.574 188 69 2 681 868 8 188 3.48e-63 213
Msa0044940 MtrunA17_Chr4g0048531 41.806 299 159 6 543 835 727 1016 4.63e-62 231
Msa0044940 MtrunA17_Chr4g0048531 45.890 146 61 2 885 1012 1132 1277 9.94e-33 137
Msa0044940 MtrunA17_Chr4g0048531 36.585 164 97 3 322 479 260 422 2.53e-26 117
Msa0044940 MtrunA17_Chr8g0361381 55.080 187 80 2 623 809 26 208 6.03e-60 204
Msa0044940 MtrunA17_Chr1g0211701 84.746 118 17 1 926 1042 30 147 2.56e-59 200
Msa0044940 MtrunA17_Chr6g0469821 70.748 147 36 2 1 147 1 140 4.28e-56 190
Msa0044940 MtrunA17_Chr8g0340381 65.476 168 39 3 722 889 36 184 2.98e-55 190
Msa0044940 MtrunA17_Chr2g0289091 59.441 143 57 1 700 842 22 163 1.93e-47 176
Msa0044940 MtrunA17_Chr2g0289091 57.658 111 28 2 885 976 310 420 2.91e-31 128
Msa0044940 MtrunA17_Chr2g0289041 39.070 215 113 7 344 552 2 204 7.87e-39 144
Msa0044940 MtrunA17_Chr8g0364411 57.143 112 48 0 322 433 33 144 3.78e-36 134
Msa0044940 MtrunA17_Chr1g0211681 72.043 93 25 1 55 147 1 92 6.01e-33 122
Msa0044940 MtrunA17_Chr1g0211671 76.190 63 15 0 953 1015 15 77 1.07e-27 109
Msa0044940 MtrunA17_Chr3g0119761 66.234 77 26 0 795 871 55 131 4.78e-25 101
Msa0044940 MtrunA17_Chr8g0361391 48.624 109 38 2 864 954 29 137 3.26e-24 100
Msa0044940 MtrunA17_Chr2g0289101 37.879 132 67 6 454 579 8 130 5.58e-15 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044940 AT3G07610.1 45.711 781 331 11 292 1003 127 883 0.0 670
Msa0044940 AT3G07610.3 44.250 800 337 12 292 1003 127 905 0.0 648
Msa0044940 AT1G11950.1 47.376 724 315 13 318 1015 189 872 0.0 635
Msa0044940 AT1G11950.3 47.376 724 315 13 318 1015 189 872 0.0 635
Msa0044940 AT1G62310.1 46.950 705 320 15 321 1000 208 883 0.0 619
Msa0044940 AT4G00990.1 41.268 773 348 16 322 1011 80 829 1.19e-179 546
Msa0044940 AT1G11950.2 45.942 653 287 14 318 944 189 801 5.67e-177 538
Msa0044940 AT4G00990.3 40.167 717 323 16 322 955 80 773 7.66e-154 476
Msa0044940 AT4G00990.2 40.476 714 319 16 322 952 80 770 8.59e-154 476
Msa0044940 AT3G07610.2 44.077 574 261 6 292 815 127 690 1.40e-152 473
Msa0044940 AT1G09060.4 32.577 749 428 17 315 1026 211 919 2.57e-112 371
Msa0044940 AT1G09060.3 32.577 749 428 17 315 1026 211 919 2.57e-112 371
Msa0044940 AT1G09060.2 32.577 749 428 17 315 1026 197 905 2.73e-112 371
Msa0044940 AT1G09060.1 32.577 749 428 17 315 1026 197 905 2.73e-112 371
Msa0044940 AT4G21430.1 31.791 497 280 8 561 1010 427 911 6.02e-72 258
Msa0044940 AT4G21430.1 29.747 158 108 3 316 471 221 377 1.37e-12 72.8

Find 243 sgRNAs with CRISPR-Local

Find 776 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATAAAGGTTATTCTTTA+AGG 0.076090 1_1:+76588642 Msa0044940:CDS
GGCCTCCTTCTAATTTATTT+AGG 0.135585 1_1:+76591859 Msa0044940:CDS
TGTCTTGCTCAAGGTGCTTT+TGG 0.146606 1_1:-76592588 None:intergenic
AATTTCTGAATGCATGATTA+TGG 0.168826 1_1:+76597657 Msa0044940:three_prime_UTR
TTGCTCGTCTGAAGCATTTA+TGG 0.202791 1_1:-76592680 None:intergenic
ATTGATCAGTGAAAAGAATT+TGG 0.212830 1_1:+76588598 Msa0044940:CDS
GCAAAATAGTGTTCGAGTTT+TGG 0.215510 1_1:+76592699 Msa0044940:CDS
TCATCCAATCGTCTTAAATA+TGG 0.224411 1_1:-76589548 None:intergenic
GTCGCCCAGATTGGCTTAAT+TGG 0.224414 1_1:+76591811 Msa0044940:CDS
TTTAAATATTCCTCCAATTC+AGG 0.228132 1_1:-76592781 None:intergenic
GCCTCCTTCTAATTTATTTA+GGG 0.243943 1_1:+76591860 Msa0044940:CDS
CTTCGTTGTGGGAAGCTTCT+AGG 0.247218 1_1:+76590094 Msa0044940:CDS
TCATGCTCACATCAAATTCT+TGG 0.261241 1_1:+76597604 Msa0044940:three_prime_UTR
GCTTGATGTGGTTAACAAAT+TGG 0.261966 1_1:+76597140 Msa0044940:CDS
AATGTGCACCAATTCTTTAC+TGG 0.265399 1_1:+76591777 Msa0044940:CDS
GGTTCCATATTGTATTTATC+TGG 0.268433 1_1:+76597486 Msa0044940:three_prime_UTR
CCACAATCATCATCGGCTTT+TGG 0.278197 1_1:-76590286 None:intergenic
CTGACATTGATGGCACATTA+AGG 0.293064 1_1:-76588877 None:intergenic
AGTACATTGCTGATAATTAC+AGG 0.293307 1_1:-76590598 None:intergenic
GGATCTGTATATTCTTTATA+CGG 0.299317 1_1:-76591924 None:intergenic
TACCAAGCACAAAACACTTT+TGG 0.300838 1_1:+76590687 Msa0044940:CDS
ATTCTTTAGATGGTGCTCTC+TGG 0.323154 1_1:+76592734 Msa0044940:CDS
GCATACCTTGTTTAAACAAT+TGG 0.324245 1_1:+76588955 Msa0044940:CDS
AGAAGCATTTCAGAGAGTTT+AGG 0.334304 1_1:+76592803 Msa0044940:CDS
TGTCATTTCTCTGACATTGA+TGG 0.335478 1_1:-76588887 None:intergenic
ATTTCTGAATGCATGATTAT+GGG 0.336048 1_1:+76597658 Msa0044940:three_prime_UTR
GGAAGATTACGTGTCAGATT+TGG 0.338618 1_1:+76588358 Msa0044940:CDS
TTGGTGGACCTGTGGTTTAT+CGG 0.340425 1_1:-76595612 None:intergenic
TTGGTTTGATTCAAGTTTAT+CGG 0.341383 1_1:+76597623 Msa0044940:three_prime_UTR
CAAGGCCGTGATTATCTTCA+TGG 0.341964 1_1:+76590151 Msa0044940:CDS
TTATCTGGCGCAACTTGATT+AGG 0.344626 1_1:+76597501 Msa0044940:three_prime_UTR
AGAAGAAACCTGGTAGAAAA+AGG 0.348376 1_1:+76588492 Msa0044940:CDS
AATAGGGGTGATTCTTTAGA+TGG 0.356154 1_1:+76592724 Msa0044940:CDS
ATATCAGTTGCATTCCTAAC+AGG 0.357202 1_1:-76590448 None:intergenic
ACTAACTCAGAGATGCAATT+TGG 0.359225 1_1:-76590343 None:intergenic
GCAGTGTAGCATAGATAGTT+AGG 0.362275 1_1:+76587749 Msa0044940:five_prime_UTR
CTCGAACTCATGGTTGTTGT+TGG 0.375822 1_1:-76589495 None:intergenic
TTTGTGAGTGGTCAAGATTC+GGG 0.378563 1_1:+76590230 Msa0044940:CDS
TGACAGTCACCATTGCTTGT+AGG 0.380366 1_1:+76595024 Msa0044940:intron
TGCGCCAGATAAATACAATA+TGG 0.384916 1_1:-76597490 None:intergenic
CTTTCCCTAAATAAATTAGA+AGG 0.387657 1_1:-76591864 None:intergenic
ATGACGTAAATTTAAAGCTC+TGG 0.387898 1_1:-76590533 None:intergenic
CGCGGAAACGGTACCGTTGA+AGG 0.390300 1_1:+76587926 Msa0044940:CDS
TGATCAGGAATGGATTCATC+TGG 0.392651 1_1:-76587867 None:intergenic
AAGAGGGTGAGGAAAAGAAT+TGG 0.395670 1_1:+76588252 Msa0044940:CDS
TGAGGCCAATTAAGCCAATC+TGG 0.400800 1_1:-76591816 None:intergenic
GTTCTTGTTTGAAGCCTGTT+AGG 0.405975 1_1:+76590434 Msa0044940:CDS
TCTGACTTGGTGAGGACAAC+CGG 0.410174 1_1:-76595100 None:intergenic
AAGATAAACTCAAACTCAAT+TGG 0.413084 1_1:-76590127 None:intergenic
TTCAATGGCACTGGAGCAAA+GGG 0.413215 1_1:+76590572 Msa0044940:CDS
CTTCCGGTTGTGTGAGAAAG+AGG 0.414317 1_1:+76588306 Msa0044940:CDS
TTCTTTAGATGGTGCTCTCT+GGG 0.419089 1_1:+76592735 Msa0044940:CDS
GAGAGAGGATGTACCTGAAT+TGG 0.421371 1_1:+76592768 Msa0044940:CDS
TATGGATTTGCTCAGGAGCT+TGG 0.422137 1_1:+76592029 Msa0044940:CDS
TTCTTTACTGGGTACACAAA+TGG 0.422160 1_1:+76591789 Msa0044940:CDS
AATGTACTTGAATGTACAAC+TGG 0.424187 1_1:+76590613 Msa0044940:CDS
ATTTGTGAGTGGTCAAGATT+CGG 0.429286 1_1:+76590229 Msa0044940:CDS
TCTTCCATATTTAAGACGAT+TGG 0.429788 1_1:+76589544 Msa0044940:CDS
TTGTGTACCCAGTAAAGAAT+TGG 0.434568 1_1:-76591785 None:intergenic
ACCTGCATTTGAAATTTCAA+TGG 0.434734 1_1:+76587776 Msa0044940:exon
AGAGGGTGAGGAAAAGAATT+GGG 0.444632 1_1:+76588253 Msa0044940:CDS
CAAAGTCACACTCACCGTTC+CGG 0.446960 1_1:+76587842 Msa0044940:CDS
AAGTTCTTTCAGCATATACT+TGG 0.448229 1_1:-76589522 None:intergenic
AATGTACAACTGGTTTAAGC+TGG 0.448278 1_1:+76590623 Msa0044940:CDS
GCCATTGAAATTTCAAATGC+AGG 0.448443 1_1:-76587777 None:intergenic
TGCCAATGTTGGCGCGGAAA+CGG 0.450167 1_1:+76587914 Msa0044940:CDS
ATATATTTACACTGGATCCT+TGG 0.451059 1_1:-76597379 None:intergenic
TTAAGTCAGTTGATTAGGTT+CGG 0.453057 1_1:+76597430 Msa0044940:exon
AGCTGATGACATGGCAGCTA+AGG 0.454453 1_1:+76588127 Msa0044940:CDS
TTGCCTCTTTCTCACACAAC+CGG 0.456045 1_1:-76588309 None:intergenic
GAAGAAGAAGGTCATAATTG+AGG 0.456146 1_1:+76588415 Msa0044940:CDS
AAGAACTCGAAGAAACAATT+AGG 0.456155 1_1:+76590377 Msa0044940:CDS
CTGCTTTAAAGGAGAGCAAT+GGG 0.464779 1_1:-76592830 None:intergenic
TGAGAAAGAGGCAAAGGCCT+AGG 0.465093 1_1:+76588318 Msa0044940:CDS
AGATTGGCTTAATTGGCCTC+AGG 0.465478 1_1:+76591818 Msa0044940:CDS
GAGATAGAAGCAAAGAGAAA+AGG 0.470722 1_1:+76589590 Msa0044940:CDS
CATGAAGATAATCACGGCCT+TGG 0.473194 1_1:-76590150 None:intergenic
TGCTTGTAGGAATCGAGCCT+TGG 0.475187 1_1:+76595037 Msa0044940:CDS
ACACAAATGGTCGCCCAGAT+TGG 0.475261 1_1:+76591802 Msa0044940:CDS
ATTGCAAACTTCCTCTCCCT+TGG 0.476735 1_1:+76597180 Msa0044940:CDS
GACAGTTTATAGTTCGGAAG+AGG 0.480891 1_1:+76588235 Msa0044940:CDS
TGACGTAAATTTAAAGCTCT+GGG 0.482957 1_1:-76590532 None:intergenic
GTCAGAGAAATGACAAGGGC+AGG 0.483009 1_1:+76588895 Msa0044940:CDS
ACCACTCACAAATCTCAGGC+TGG 0.483334 1_1:-76590219 None:intergenic
TATTGCTTATGGATTTGCTC+AGG 0.486399 1_1:+76592022 Msa0044940:CDS
AGGCAATTGATTGCTTAGAT+TGG 0.486412 1_1:+76590716 Msa0044940:CDS
TGTGGTTTATCGGAAGCTTA+CGG 0.487799 1_1:-76595602 None:intergenic
GTTTCTCGACGATCATGATC+AGG 0.488002 1_1:-76587882 None:intergenic
ACGATTGGATGAAGAACAAA+TGG 0.491089 1_1:+76589559 Msa0044940:CDS
ATGTGCACCAATTCTTTACT+GGG 0.492244 1_1:+76591778 Msa0044940:CDS
AGCTTTAAATTTACGTCATG+AGG 0.498076 1_1:+76590537 Msa0044940:CDS
TAGGAAGATTAAATCGTTGA+AGG 0.499461 1_1:+76588337 Msa0044940:CDS
TTACCTTTAGATTTCTGACT+TGG 0.503046 1_1:-76595113 None:intergenic
GACCTCCAACCTGTCCTTGG+TGG 0.508939 1_1:-76595628 None:intergenic
TTCAACGATTTAATCTTCCT+AGG 0.509264 1_1:-76588335 None:intergenic
GCTTGGTATTTCTTATCTGA+CGG 0.510840 1_1:-76590672 None:intergenic
ACCTGTCCTTGGTGGACCTG+TGG 0.512572 1_1:-76595620 None:intergenic
CTTGACCACTCACAAATCTC+AGG 0.514084 1_1:-76590223 None:intergenic
ACAGACCTCCAACCTGTCCT+TGG 0.514908 1_1:-76595631 None:intergenic
TTTCAATGGCACTGGAGCAA+AGG 0.515097 1_1:+76590571 Msa0044940:CDS
AGATTACGTGTCAGATTTGG+AGG 0.516385 1_1:+76588361 Msa0044940:CDS
GTTGTTGTGAGCTTCGTTGT+GGG 0.519321 1_1:+76590083 Msa0044940:CDS
GCTCCCTCTTGTCTTGCTCA+AGG 0.519343 1_1:-76592597 None:intergenic
TCGACGATCATGATCAGGAA+TGG 0.519620 1_1:-76587877 None:intergenic
ATATACTACTTTGCTCTCAA+AGG 0.522037 1_1:+76597231 Msa0044940:CDS
TTTCTCACATATATTTACAC+TGG 0.523098 1_1:-76597387 None:intergenic
TACCGTTTCCGCGCCAACAT+TGG 0.523494 1_1:-76587916 None:intergenic
TACGGAATTCCTCAGTCAAA+CGG 0.525984 1_1:-76595584 None:intergenic
GAGTTTGAGTTTATCTTCCA+AGG 0.526474 1_1:+76590133 Msa0044940:CDS
AAGACAGAGCAGAAGAAACC+TGG 0.528230 1_1:+76588482 Msa0044940:CDS
TTATAGTTCGGAAGAGGGTG+AGG 0.529955 1_1:+76588241 Msa0044940:CDS
CAGTGTAGCATAGATAGTTA+GGG 0.529972 1_1:+76587750 Msa0044940:five_prime_UTR
TTGTAGTCATGCATCAAGGT+TGG 0.532619 1_1:+76595522 Msa0044940:intron
GAAGTATGCTTCTCAGTTCG+AGG 0.532683 1_1:-76590318 None:intergenic
TATCGGTGTTAGAGCTGAAA+CGG 0.532983 1_1:+76587968 Msa0044940:CDS
GGAATGGATTCATCTGGGTC+CGG 0.533236 1_1:-76587861 None:intergenic
GAAGGTGCTGACGTGGAAGA+AGG 0.533445 1_1:+76588275 Msa0044940:CDS
TGTATATTCTTTATACGGCA+AGG 0.541667 1_1:-76591919 None:intergenic
AATATATGTGAGAAATCCAA+TGG 0.542887 1_1:+76597395 Msa0044940:CDS
TGCCATGTCATCAGCTTCAA+CGG 0.544773 1_1:-76588120 None:intergenic
CCATTGCTCTCCTTTAAAGC+AGG 0.546741 1_1:+76592831 Msa0044940:CDS
AACTCAGAGATGCAATTTGG+TGG 0.548310 1_1:-76590340 None:intergenic
GGCTCGATTCCTACAAGCAA+TGG 0.551570 1_1:-76595033 None:intergenic
TGAGATGCACAAAATGCAAA+CGG 0.552047 1_1:+76588922 Msa0044940:CDS
GCGTTGTTGAACAACGATGA+AGG 0.552811 1_1:+76587990 Msa0044940:CDS
CCTGCTTTAAAGGAGAGCAA+TGG 0.552913 1_1:-76592831 None:intergenic
GCCGATGATGATTGTGGTCA+TGG 0.553086 1_1:+76590292 Msa0044940:CDS
TTGTTGTCGACGGACGATGA+AGG 0.553268 1_1:+76588095 Msa0044940:CDS
ACTTGGAGAGCTCGAACTCA+TGG 0.555503 1_1:-76589505 None:intergenic
TCACCAAGTCAGAAATCTAA+AGG 0.555814 1_1:+76595110 Msa0044940:CDS
AGAGGATGTACCTGAATTGG+AGG 0.558183 1_1:+76592771 Msa0044940:CDS
TGCATTTGAAATTTCAATGG+CGG 0.561423 1_1:+76587779 Msa0044940:exon
AGGTTAAGAATGCCTTTGAA+AGG 0.562396 1_1:-76591945 None:intergenic
CAAATTCATAACCAAGGGAG+AGG 0.563528 1_1:-76597191 None:intergenic
ACCACAGGTCCACCAAGGAC+AGG 0.565099 1_1:+76595619 Msa0044940:CDS
ATTAAAGAGAAGAAGAGAGC+TGG 0.566428 1_1:+76588197 Msa0044940:CDS
GGAATACAAGAAGTTGTCAC+TGG 0.567927 1_1:-76590509 None:intergenic
TCAGGCTGGGCAGCAGAATG+AGG 0.568737 1_1:-76590205 None:intergenic
GAATGATGAAGCTGAACAAG+AGG 0.569424 1_1:+76588448 Msa0044940:CDS
TGTTGTTGTGAGCTTCGTTG+TGG 0.569590 1_1:+76590082 Msa0044940:CDS
GCACCTTGAGCAAGACAAGA+GGG 0.570458 1_1:+76592594 Msa0044940:CDS
ATGTACAACTGGTTTAAGCT+GGG 0.570533 1_1:+76590624 Msa0044940:CDS
TGAAGCTGAACAAGAGGAGG+AGG 0.572752 1_1:+76588454 Msa0044940:CDS
GTTGTCACTGGAATCTTCAC+GGG 0.575662 1_1:-76590497 None:intergenic
GAATATACAGATCCTTTCAA+AGG 0.575964 1_1:+76591933 Msa0044940:CDS
GTGTCACTAACTCGTATACC+TGG 0.576276 1_1:+76597573 Msa0044940:three_prime_UTR
GCGGAAACGGTACCGTTGAA+GGG 0.579178 1_1:+76587927 Msa0044940:CDS
AGTTGTCACTGGAATCTTCA+CGG 0.579890 1_1:-76590498 None:intergenic
TTGTACCAATTGTTTAAACA+AGG 0.581322 1_1:-76588960 None:intergenic
ACAGTTTATAGTTCGGAAGA+GGG 0.583088 1_1:+76588236 Msa0044940:CDS
AAGGTATCCTCACTTGAAAG+AGG 0.584254 1_1:+76589289 Msa0044940:intron
GATGACGTGGCACAAGCTAT+CGG 0.585670 1_1:+76587951 Msa0044940:CDS
TCTTTCAATTTCAAAACCTG+AGG 0.586296 1_1:-76591834 None:intergenic
CTACATGGTGATAATCGAGA+TGG 0.586913 1_1:+76592619 Msa0044940:CDS
ATTTGAAATTTCAATGGCGG+AGG 0.588198 1_1:+76587782 Msa0044940:exon
ACTTGGTGAGGACAACCGGC+AGG 0.588247 1_1:-76595096 None:intergenic
CCACTCACAAATCTCAGGCT+GGG 0.588333 1_1:-76590218 None:intergenic
TTTAGATTTCTGACTTGGTG+AGG 0.588372 1_1:-76595108 None:intergenic
ATATATGTGAGAAATCCAAT+GGG 0.588930 1_1:+76597396 Msa0044940:CDS
GAGGCCAATTAAGCCAATCT+GGG 0.589315 1_1:-76591815 None:intergenic
TTTGTCTCACCTGAAAATGT+TGG 0.589435 1_1:+76595552 Msa0044940:CDS
CAAGACAAGAGGGAGCTACA+TGG 0.591607 1_1:+76592604 Msa0044940:CDS
TCCCTAAATAAATTAGAAGG+AGG 0.592028 1_1:-76591861 None:intergenic
CAATTAACAGTGGATTGAAG+AGG 0.593067 1_1:+76588851 Msa0044940:intron
AGCTTCTGAATAAAAGTCCA+AGG 0.593398 1_1:-76595054 None:intergenic
GCTGGGAACCGCTTGTCATG+TGG 0.594440 1_1:+76590641 Msa0044940:CDS
GTGAGCATGAATTAGCATCC+AGG 0.595212 1_1:-76597591 None:intergenic
TTTGCTCAGGAGCTTGGACG+TGG 0.595460 1_1:+76592035 Msa0044940:CDS
GTCCACCAAGGACAGGTTGG+AGG 0.596001 1_1:+76595626 Msa0044940:CDS
AAATGTTCTAAAGCCAGACA+TGG 0.598652 1_1:+76591986 Msa0044940:CDS
ACACAACCTACTGCCAATGT+TGG 0.598702 1_1:+76587903 Msa0044940:CDS
TGAAGAACAAATGGTCGAGA+AGG 0.598904 1_1:+76589568 Msa0044940:CDS
TCCGCGCCAACATTGGCAGT+AGG 0.599431 1_1:-76587909 None:intergenic
AACGGTGGTGTTGTTGTCGA+CGG 0.600381 1_1:+76588085 Msa0044940:CDS
GAATTGGGAAGGTGCTGACG+TGG 0.602384 1_1:+76588268 Msa0044940:CDS
ACCTACTGCCAATGTTGGCG+CGG 0.602878 1_1:+76587908 Msa0044940:CDS
TTACAGGTTTGGAGAAACCA+AGG 0.603320 1_1:+76597362 Msa0044940:intron
TATATCAAATTCATAACCAA+GGG 0.603345 1_1:-76597196 None:intergenic
CAGGTCCACCAAGGACAGGT+TGG 0.604718 1_1:+76595623 Msa0044940:CDS
CAATGCTGAACAAGAGTGTG+AGG 0.604968 1_1:+76588163 Msa0044940:CDS
GAAACGTGGTAGGAAGAAGA+AGG 0.606573 1_1:+76588403 Msa0044940:CDS
GGTGAGGAAAAGAATTGGGA+AGG 0.609015 1_1:+76588257 Msa0044940:CDS
GGTGCTGACGTGGAAGAAGG+AGG 0.610124 1_1:+76588278 Msa0044940:CDS
ACCATGACCACAATCATCAT+CGG 0.612092 1_1:-76590293 None:intergenic
ACGTAAATTTAAAGCTCTGG+GGG 0.612630 1_1:-76590530 None:intergenic
TTACGTGTCAGATTTGGAGG+AGG 0.613999 1_1:+76588364 Msa0044940:CDS
AAATGACGAAGATGAACAAG+AGG 0.614355 1_1:+76588538 Msa0044940:CDS
GATCAGGAATGGATTCATCT+GGG 0.615316 1_1:-76587866 None:intergenic
ACTTCCTCCTCTTTCAAGTG+AGG 0.615486 1_1:-76589296 None:intergenic
CTACTTTGCTCTCAAAGGCA+TGG 0.616622 1_1:+76597236 Msa0044940:CDS
AGCACCTTGAGCAAGACAAG+AGG 0.618569 1_1:+76592593 Msa0044940:CDS
GGATTCATCTGGGTCCGGAA+CGG 0.621269 1_1:-76587856 None:intergenic
TGATGAAGCTGAACAAGAGG+AGG 0.621390 1_1:+76588451 Msa0044940:CDS
TTCCGTTGAAGCTGATGACA+TGG 0.621539 1_1:+76588118 Msa0044940:CDS
TTCATGGTGGAAAAGAAGAG+AGG 0.621997 1_1:+76590167 Msa0044940:CDS
AATTAGGCTTCAAGATGCAG+AGG 0.623081 1_1:+76590393 Msa0044940:CDS
TTGCAATTACCACAGCACAC+TGG 0.624403 1_1:-76589332 None:intergenic
TCAGAGAAATGACAAGGGCA+GGG 0.624776 1_1:+76588896 Msa0044940:CDS
TTTCAGGCAACTTCACAGCA+AGG 0.625295 1_1:-76591965 None:intergenic
TCATGGTGGAAAAGAAGAGA+GGG 0.625856 1_1:+76590168 Msa0044940:CDS
GTTGTGTGAGAAAGAGGCAA+AGG 0.627339 1_1:+76588312 Msa0044940:CDS
TGAAGTGAAATTGAAATCTG+AGG 0.628039 1_1:+76592540 Msa0044940:CDS
AATAAACAAACGGAATCCAA+AGG 0.628262 1_1:+76588712 Msa0044940:CDS
GAAGTGAAATTGAAATCTGA+GGG 0.629648 1_1:+76592541 Msa0044940:CDS
GTATATCAAATTCATAACCA+AGG 0.630485 1_1:-76597197 None:intergenic
TTCCACCATGAAGATAATCA+CGG 0.630533 1_1:-76590156 None:intergenic
TTAACAAATTGGAGAAAACA+AGG 0.631124 1_1:+76597151 Msa0044940:CDS
GCCACGTCATCACCCTTCAA+CGG 0.632095 1_1:-76587939 None:intergenic
GTAAGCTTCCGATAAACCAC+AGG 0.632121 1_1:+76595604 Msa0044940:CDS
CCAAAAGCCGATGATGATTG+TGG 0.633999 1_1:+76590286 Msa0044940:CDS
GTGCTGACGTGGAAGAAGGA+GGG 0.635869 1_1:+76588279 Msa0044940:CDS
TATACACAATAACACAAGGA+AGG 0.636388 1_1:+76590468 Msa0044940:CDS
TATATATGCTATGCTTGATG+TGG 0.638461 1_1:+76597128 Msa0044940:CDS
GAAAGAGGAGGAAGTTGCTG+AGG 0.638538 1_1:+76589304 Msa0044940:CDS
GGGTGGCATGCAGATAGTGA+TGG 0.640615 1_1:+76590250 Msa0044940:CDS
GTATCCTCACTTGAAAGAGG+AGG 0.641340 1_1:+76589292 Msa0044940:CDS
ACCGTTGAAGGGTGATGACG+TGG 0.641508 1_1:+76587938 Msa0044940:CDS
TGACGAAGATGAACAAGAGG+GGG 0.641516 1_1:+76588541 Msa0044940:CDS
CTGATATACACAATAACACA+AGG 0.643123 1_1:+76590464 Msa0044940:CDS
TCACTGTATATGTGACTGTG+TGG 0.644617 1_1:-76587815 None:intergenic
GAGGCATGTCCAGTGTGCTG+TGG 0.646992 1_1:+76589323 Msa0044940:CDS
GACGTAAATTTAAAGCTCTG+GGG 0.647211 1_1:-76590531 None:intergenic
CCACTGTAATATGTCTGATG+CGG 0.649776 1_1:+76592076 Msa0044940:CDS
CACAACAGTACAAAACAAGT+CGG 0.652441 1_1:-76597543 None:intergenic
CGTTGTGGGAAGCTTCTAGG+TGG 0.657294 1_1:+76590097 Msa0044940:CDS
ATTATCAAACATGTCAACGT+TGG 0.657373 1_1:-76592647 None:intergenic
AATGTTCTAAAGCCAGACAT+GGG 0.657555 1_1:+76591987 Msa0044940:CDS
TCAATGTCAGAGAAATGACA+AGG 0.658738 1_1:+76588890 Msa0044940:CDS
AATGACGAAGATGAACAAGA+GGG 0.659397 1_1:+76588539 Msa0044940:CDS
GTGAGTGGTCAAGATTCGGG+TGG 0.671679 1_1:+76590233 Msa0044940:CDS
GGCCGTGATTATCTTCATGG+TGG 0.676321 1_1:+76590154 Msa0044940:CDS
CCCAGCCTGAGATTTGTGAG+TGG 0.676512 1_1:+76590218 Msa0044940:CDS
AATGCACGCCACATGACAAG+CGG 0.682465 1_1:-76590649 None:intergenic
TGAGTGCTTCCGTTTGACTG+AGG 0.694932 1_1:+76595575 Msa0044940:CDS
ATGACGAAGATGAACAAGAG+GGG 0.700639 1_1:+76588540 Msa0044940:CDS
TGATTGCTTAGATTGGTGTG+AGG 0.703268 1_1:+76590723 Msa0044940:CDS
ATGAACTCAGCACAATGACG+AGG 0.704061 1_1:-76591891 None:intergenic
CAACGATGAAGGTGATGACG+TGG 0.706445 1_1:+76588001 Msa0044940:CDS
GATAAACCACAGGTCCACCA+AGG 0.718071 1_1:+76595614 Msa0044940:CDS
CAATGTCAGAGAAATGACAA+GGG 0.723230 1_1:+76588891 Msa0044940:CDS
CCGCATCAGACATATTACAG+TGG 0.743850 1_1:-76592076 None:intergenic
CGATGAAGGTGATGACGTGG+TGG 0.749030 1_1:+76588004 Msa0044940:CDS
TCAATGGCACTGGAGCAAAG+GGG 0.769506 1_1:+76590573 Msa0044940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATATTATTATTGGTT+TGG + chr1_1:76589083-76589102 Msa0044940:intron 10.0%
!!! TTATACTGTTATTTTTTAAT+TGG + chr1_1:76592171-76592190 Msa0044940:intron 10.0%
!! TTTAATACAAATTTATTAAG+TGG + chr1_1:76593177-76593196 Msa0044940:intron 10.0%
!!! ATTGTTTAAATTTTTTGAAT+TGG + chr1_1:76595894-76595913 Msa0044940:intron 10.0%
!! ATGTTAAATTACAATTTATA+GGG - chr1_1:76595975-76595994 None:intergenic 10.0%
!! TATGTTAAATTACAATTTAT+AGG - chr1_1:76595976-76595995 None:intergenic 10.0%
!! ATAATAAAGGTTATTCTTTA+AGG + chr1_1:76588642-76588661 Msa0044940:CDS 15.0%
!! TGTCGAAAAAATATTATTAT+CGG + chr1_1:76589211-76589230 Msa0044940:intron 15.0%
!!! AAAAAATATTATTATCGGTT+TGG + chr1_1:76589216-76589235 Msa0044940:intron 15.0%
!!! TTTTTAATTGGATATCATAT+TGG + chr1_1:76592183-76592202 Msa0044940:intron 15.0%
!!! AATGTGTTTCTTTTATAATT+TGG + chr1_1:76592486-76592505 Msa0044940:intron 15.0%
!!! CTTTTATAATTTGGAATTTT+AGG + chr1_1:76592495-76592514 Msa0044940:intron 15.0%
!! GCTTATTTATTCTTATAATT+TGG - chr1_1:76594143-76594162 None:intergenic 15.0%
!!! TATTATTTTCGTATGTTTTT+TGG + chr1_1:76594941-76594960 Msa0044940:intron 15.0%
!!! ATTATTTTCGTATGTTTTTT+GGG + chr1_1:76594942-76594961 Msa0044940:intron 15.0%
!! CAAATATTGTACTAAAATTT+AGG - chr1_1:76595221-76595240 None:intergenic 15.0%
!! TAAAAAAAATTATTCAATGC+GGG - chr1_1:76596257-76596276 None:intergenic 15.0%
!! CTAAAAAAAATTATTCAATG+CGG - chr1_1:76596258-76596277 None:intergenic 15.0%
!!! ATAAAATAGTTTTATGCATT+CGG + chr1_1:76596447-76596466 Msa0044940:intron 15.0%
!! CATCAATCATAATTATATAA+TGG - chr1_1:76596909-76596928 None:intergenic 15.0%
!! AAAAAAGACAGTTTATAGTT+CGG + chr1_1:76588229-76588248 Msa0044940:CDS 20.0%
!!! GTTTTATCAGATGATAATAA+AGG + chr1_1:76588629-76588648 Msa0044940:CDS 20.0%
!! CATGTATATATGTTTGAATT+TGG + chr1_1:76588792-76588811 Msa0044940:intron 20.0%
!!! GTTTTTGCTTTATTTTATGA+AGG + chr1_1:76589270-76589289 Msa0044940:intron 20.0%
!!! TTTTTTCTTCTTCTTTCTTT+TGG + chr1_1:76589716-76589735 Msa0044940:intron 20.0%
!! GAAAAAACAAGTACTTTAAA+TGG - chr1_1:76589772-76589791 None:intergenic 20.0%
!!! TCCAATTTTTAATTTGCTTT+TGG + chr1_1:76589819-76589838 Msa0044940:intron 20.0%
!!! CCAATTTTTAATTTGCTTTT+GGG + chr1_1:76589820-76589839 Msa0044940:intron 20.0%
!! ATAAAAATTGCAGAAATTAC+AGG - chr1_1:76591726-76591745 None:intergenic 20.0%
!!! CATAAGCAATATATGTTTTT+GGG - chr1_1:76592013-76592032 None:intergenic 20.0%
!! GACTAGATCTTAATTAATTA+GGG - chr1_1:76592948-76592967 None:intergenic 20.0%
!! AGACTAGATCTTAATTAATT+AGG - chr1_1:76592949-76592968 None:intergenic 20.0%
!! AGTCTATTTATCCTATAAAT+AGG + chr1_1:76592964-76592983 Msa0044940:intron 20.0%
!! ATGATAAATATGGAATAACA+TGG - chr1_1:76593977-76593996 None:intergenic 20.0%
!! TTATTCTTATAATTTGGTCT+AGG - chr1_1:76594137-76594156 None:intergenic 20.0%
!! TATAAGAATAAATAAGCATG+AGG + chr1_1:76594146-76594165 Msa0044940:intron 20.0%
!! TCTATTCTTATCATAATGTA+AGG - chr1_1:76594638-76594657 None:intergenic 20.0%
!! AGAATAGTTAGAACTTTATT+TGG + chr1_1:76594735-76594754 Msa0044940:intron 20.0%
!! ATTATGTATGTATATCTTGA+TGG + chr1_1:76594811-76594830 Msa0044940:intron 20.0%
!! ATTTCAAAAAAAACTGACAT+GGG - chr1_1:76595332-76595351 None:intergenic 20.0%
!! TATTTCAAAAAAAACTGACA+TGG - chr1_1:76595333-76595352 None:intergenic 20.0%
!! TTTGTGTTAATGTCAATATA+TGG + chr1_1:76595490-76595509 Msa0044940:intron 20.0%
!! AAACTACGATTGATATTTAA+AGG - chr1_1:76596383-76596402 None:intergenic 20.0%
!!! TAAAATAGTTTTATGCATTC+GGG + chr1_1:76596448-76596467 Msa0044940:intron 20.0%
!! TATATCAAATTCATAACCAA+GGG - chr1_1:76597199-76597218 None:intergenic 20.0%
! ATTGATCAGTGAAAAGAATT+TGG + chr1_1:76588598-76588617 Msa0044940:CDS 25.0%
!!! CGTTTGTTTATTTTTTGCTT+CGG - chr1_1:76588704-76588723 None:intergenic 25.0%
! CGAAGCAAAAAATAAACAAA+CGG + chr1_1:76588702-76588721 Msa0044940:CDS 25.0%
! TTGTACCAATTGTTTAAACA+AGG - chr1_1:76588963-76588982 None:intergenic 25.0%
! TTTGTATAGTTGAGGATATT+TGG + chr1_1:76589040-76589059 Msa0044940:intron 25.0%
!!! ATTATTATTGGTTTGGATTG+TGG + chr1_1:76589090-76589109 Msa0044940:intron 25.0%
! ATTTAAGCAAAAACATACAC+CGG - chr1_1:76589131-76589150 None:intergenic 25.0%
! TTTGTATAGTTGAGGATATT+TGG + chr1_1:76589040-76589059 Msa0044940:intron 25.0%
! AATAAAGCAAAAACATACAC+CGG - chr1_1:76589264-76589283 None:intergenic 25.0%
! ACATGAATAGTTAATCTAAG+GGG - chr1_1:76589405-76589424 None:intergenic 25.0%
! CACATGAATAGTTAATCTAA+GGG - chr1_1:76589406-76589425 None:intergenic 25.0%
! TCACATGAATAGTTAATCTA+AGG - chr1_1:76589407-76589426 None:intergenic 25.0%
! CACACATTAATAAAAGGATA+GGG - chr1_1:76589670-76589689 None:intergenic 25.0%
! ACACACATTAATAAAAGGAT+AGG - chr1_1:76589671-76589690 None:intergenic 25.0%
! AAGCAACACACATTAATAAA+AGG - chr1_1:76589676-76589695 None:intergenic 25.0%
! CCCAAAAGCAAATTAAAAAT+TGG - chr1_1:76589823-76589842 None:intergenic 25.0%
! AAGATAAACTCAAACTCAAT+TGG - chr1_1:76590130-76590149 None:intergenic 25.0%
!!! AGGATTTAAGACATTTTCAA+TGG + chr1_1:76590557-76590576 Msa0044940:CDS 25.0%
!!! GAGAGTACTTATTTCTTTTT+GGG + chr1_1:76590946-76590965 Msa0044940:intron 25.0%
!!! ACTTATTTCTTTTTGGGATT+AGG + chr1_1:76590952-76590971 Msa0044940:intron 25.0%
! ATTACATATGAATTGAGTGA+TGG - chr1_1:76591005-76591024 None:intergenic 25.0%
!!! AAAATCTTTTGAAGAGATTC+AGG - chr1_1:76591034-76591053 None:intergenic 25.0%
!! TGAATCTCTTCAAAAGATTT+TGG + chr1_1:76591033-76591052 Msa0044940:intron 25.0%
! GATATACCTAATTACTAATC+AGG + chr1_1:76591182-76591201 Msa0044940:intron 25.0%
! TACAATCCTGATTAGTAATT+AGG - chr1_1:76591191-76591210 None:intergenic 25.0%
! AATAGAAAAATAGAAACCAG+AGG - chr1_1:76591405-76591424 None:intergenic 25.0%
!!! AGGTTTTGAAATTGAAAGAT+TGG + chr1_1:76591838-76591857 Msa0044940:CDS 25.0%
! CTTTCCCTAAATAAATTAGA+AGG - chr1_1:76591867-76591886 None:intergenic 25.0%
! GGATCTGTATATTCTTTATA+CGG - chr1_1:76591927-76591946 None:intergenic 25.0%
!! CCATAAGCAATATATGTTTT+TGG - chr1_1:76592014-76592033 None:intergenic 25.0%
! CCAAAAACATATATTGCTTA+TGG + chr1_1:76592011-76592030 Msa0044940:CDS 25.0%
! TAATTGGATATCATATTGGA+AGG + chr1_1:76592187-76592206 Msa0044940:intron 25.0%
! TATTAGTAACAAACACACAA+AGG - chr1_1:76592380-76592399 None:intergenic 25.0%
! TTTAAATATTCCTCCAATTC+AGG - chr1_1:76592784-76592803 None:intergenic 25.0%
!!! AATAGTTTTACCTGCTTTAA+AGG - chr1_1:76592844-76592863 None:intergenic 25.0%
! TATTGTGGATACCTATTTAT+AGG - chr1_1:76592978-76592997 None:intergenic 25.0%
! AATGATATAGAGTTATCAGT+GGG - chr1_1:76593134-76593153 None:intergenic 25.0%
! TAATGATATAGAGTTATCAG+TGG - chr1_1:76593135-76593154 None:intergenic 25.0%
!! AGATGGTATCAATTTTATCA+TGG - chr1_1:76593209-76593228 None:intergenic 25.0%
! CTGATACCATACTAAAATTT+GGG - chr1_1:76593851-76593870 None:intergenic 25.0%
! TCTGATACCATACTAAAATT+TGG - chr1_1:76593852-76593871 None:intergenic 25.0%
! TTTGTCTTAGATCTCTTATT+GGG + chr1_1:76593873-76593892 Msa0044940:intron 25.0%
!! TAAGCTTTATAAGACTACAT+GGG - chr1_1:76594070-76594089 None:intergenic 25.0%
!! TTTTACAAAATCAGCTTGTA+AGG - chr1_1:76594104-76594123 None:intergenic 25.0%
! AAAGAAAGAAACACAATTCT+GGG + chr1_1:76594327-76594346 Msa0044940:intron 25.0%
! ACTTAATCCAAAATGTAAGT+TGG + chr1_1:76594446-76594465 Msa0044940:intron 25.0%
! CTTAATCCAAAATGTAAGTT+GGG + chr1_1:76594447-76594466 Msa0044940:intron 25.0%
! TATCCAACAGATATGATTAT+CGG + chr1_1:76594565-76594584 Msa0044940:intron 25.0%
! CATATTATATATTGTTCGAC+TGG + chr1_1:76594596-76594615 Msa0044940:intron 25.0%
!!! TCGACTGGTTTATTAATTTA+TGG + chr1_1:76594611-76594630 Msa0044940:intron 25.0%
! TAATGAATTTCCTTTCTTTC+TGG - chr1_1:76594677-76594696 None:intergenic 25.0%
! GTAAAATCTTCATACATGTA+TGG + chr1_1:76595132-76595151 Msa0044940:intron 25.0%
!! AATAAACTTCTAGGAAAACA+AGG - chr1_1:76595167-76595186 None:intergenic 25.0%
!! TGTAGTCTTAATAAACTTCT+AGG - chr1_1:76595176-76595195 None:intergenic 25.0%
!! TAAGACTACAAATTTTCTCT+AGG + chr1_1:76595186-76595205 Msa0044940:intron 25.0%
!!! ATACTGATTCAAGCTTATAT+GGG - chr1_1:76595287-76595306 None:intergenic 25.0%
! TTTATACAATATCAGCATGA+TGG + chr1_1:76595371-76595390 Msa0044940:intron 25.0%
! TTATACAATATCAGCATGAT+GGG + chr1_1:76595372-76595391 Msa0044940:intron 25.0%
!! TTATTTCTTGCAAATTGTTG+AGG + chr1_1:76595404-76595423 Msa0044940:intron 25.0%
! AAAAGTGAGTAAGTGATAAA+TGG - chr1_1:76595430-76595449 None:intergenic 25.0%
! AAAGAAGCTAATGACAAAAT+AGG - chr1_1:76595713-76595732 None:intergenic 25.0%
! TTATAATAGTGCCAAACATT+TGG - chr1_1:76595827-76595846 None:intergenic 25.0%
! TGCATTACAATATTTCTCTA+GGG - chr1_1:76596306-76596325 None:intergenic 25.0%
! ATGCATTACAATATTTCTCT+AGG - chr1_1:76596307-76596326 None:intergenic 25.0%
! TACTGCTTATGTTAAAGTTA+TGG + chr1_1:76596850-76596869 Msa0044940:intron 25.0%
! ACTGCTTATGTTAAAGTTAT+GGG + chr1_1:76596851-76596870 Msa0044940:intron 25.0%
!!! TATGGGTTTTAGATAAAGAA+CGG + chr1_1:76596868-76596887 Msa0044940:intron 25.0%
!! ATTTGTTTCTCTATTCTCTT+AGG - chr1_1:76596992-76597011 None:intergenic 25.0%
! TTAACAAATTGGAGAAAACA+AGG + chr1_1:76597151-76597170 Msa0044940:CDS 25.0%
! GTATATCAAATTCATAACCA+AGG - chr1_1:76597200-76597219 None:intergenic 25.0%
! ATGTATTCAATTTACAGGTT+TGG + chr1_1:76597351-76597370 Msa0044940:intron 25.0%
! TTTCTCACATATATTTACAC+TGG - chr1_1:76597390-76597409 None:intergenic 25.0%
! AATATATGTGAGAAATCCAA+TGG + chr1_1:76597395-76597414 Msa0044940:CDS 25.0%
! ATATATGTGAGAAATCCAAT+GGG + chr1_1:76597396-76597415 Msa0044940:CDS 25.0%
! TTAAAAATGTACATTCCCAT+TGG - chr1_1:76597414-76597433 None:intergenic 25.0%
!!! CATTTTTAAGTCAGTTGATT+AGG + chr1_1:76597425-76597444 Msa0044940:exon 25.0%
!! TTGGTTTGATTCAAGTTTAT+CGG + chr1_1:76597623-76597642 Msa0044940:three_prime_UTR 25.0%
! AATTTCTGAATGCATGATTA+TGG + chr1_1:76597657-76597676 Msa0044940:three_prime_UTR 25.0%
! ATTTCTGAATGCATGATTAT+GGG + chr1_1:76597658-76597677 Msa0044940:three_prime_UTR 25.0%
!! CACATTTTGCAAAACATTAA+GGG - chr1_1:76597695-76597714 None:intergenic 25.0%
!! CTTAATGTTTTGCAAAATGT+GGG + chr1_1:76597694-76597713 Msa0044940:three_prime_UTR 25.0%
! ACCTGCATTTGAAATTTCAA+TGG + chr1_1:76587776-76587795 Msa0044940:exon 30.0%
! TGCATTTGAAATTTCAATGG+CGG + chr1_1:76587779-76587798 Msa0044940:exon 30.0%
!!! ATATCTTGTTTTTCTCGATC+AGG - chr1_1:76588050-76588069 None:intergenic 30.0%
TGATCGAGAAAAACAAGATA+TGG + chr1_1:76588049-76588068 Msa0044940:CDS 30.0%
GAAAAACAAGATATGGATGT+TGG + chr1_1:76588056-76588075 Msa0044940:CDS 30.0%
TTCAACGATTTAATCTTCCT+AGG - chr1_1:76588338-76588357 None:intergenic 30.0%
TAGGAAGATTAAATCGTTGA+AGG + chr1_1:76588337-76588356 Msa0044940:CDS 30.0%
AGAAAAAGGAAAGTAGGTTA+TGG + chr1_1:76588506-76588525 Msa0044940:CDS 30.0%
AATAAACAAACGGAATCCAA+AGG + chr1_1:76588712-76588731 Msa0044940:CDS 30.0%
! TTCTGTTTCTCAATTAACAG+TGG + chr1_1:76588841-76588860 Msa0044940:intron 30.0%
! GCATACCTTGTTTAAACAAT+TGG + chr1_1:76588955-76588974 Msa0044940:CDS 30.0%
! TGTTTTACCTTCTCATTTGT+TGG + chr1_1:76588996-76589015 Msa0044940:intron 30.0%
AAGATAACCAACAAATGAGA+AGG - chr1_1:76589006-76589025 None:intergenic 30.0%
AATGAGACTTTGTATAGTTG+AGG + chr1_1:76589032-76589051 Msa0044940:intron 30.0%
AATGAGACTTTGTATAGTTG+AGG + chr1_1:76589032-76589051 Msa0044940:intron 30.0%
!! ATTATTATCGGTTTGGATTG+TGG + chr1_1:76589223-76589242 Msa0044940:intron 30.0%
CATGAATAGTTAATCTAAGG+GGG - chr1_1:76589404-76589423 None:intergenic 30.0%
! ACATTTGAAATGTGATCATC+TGG + chr1_1:76589440-76589459 Msa0044940:intron 30.0%
AAGTTCTTTCAGCATATACT+TGG - chr1_1:76589525-76589544 None:intergenic 30.0%
! TCTTCCATATTTAAGACGAT+TGG + chr1_1:76589544-76589563 Msa0044940:CDS 30.0%
TCATCCAATCGTCTTAAATA+TGG - chr1_1:76589551-76589570 None:intergenic 30.0%
! ACAACAAAAAGTGAGACTTT+TGG - chr1_1:76589627-76589646 None:intergenic 30.0%
!!! CTTATTTTTAGGGTAATCTG+CGG - chr1_1:76589889-76589908 None:intergenic 30.0%
!!! AGTACACACGCTTATTTTTA+GGG - chr1_1:76589899-76589918 None:intergenic 30.0%
AAGAACTCGAAGAAACAATT+AGG + chr1_1:76590377-76590396 Msa0044940:CDS 30.0%
CTGATATACACAATAACACA+AGG + chr1_1:76590464-76590483 Msa0044940:CDS 30.0%
TATACACAATAACACAAGGA+AGG + chr1_1:76590468-76590487 Msa0044940:CDS 30.0%
! TGACGTAAATTTAAAGCTCT+GGG - chr1_1:76590535-76590554 None:intergenic 30.0%
! ATGACGTAAATTTAAAGCTC+TGG - chr1_1:76590536-76590555 None:intergenic 30.0%
!! AGCTTTAAATTTACGTCATG+AGG + chr1_1:76590537-76590556 Msa0044940:CDS 30.0%
AGTACATTGCTGATAATTAC+AGG - chr1_1:76590601-76590620 None:intergenic 30.0%
AATGTACTTGAATGTACAAC+TGG + chr1_1:76590613-76590632 Msa0044940:CDS 30.0%
! TTCATCACGTTTTCTGAATT+TGG + chr1_1:76590924-76590943 Msa0044940:intron 30.0%
!!! GGAGAGTACTTATTTCTTTT+TGG + chr1_1:76590945-76590964 Msa0044940:intron 30.0%
AAACTGTTGGAACAGTAATT+TGG - chr1_1:76591065-76591084 None:intergenic 30.0%
!!! TTACTGTTCCAACAGTTTTT+TGG + chr1_1:76591067-76591086 Msa0044940:intron 30.0%
! CAGTAAGAAACATTTCTAGA+TGG + chr1_1:76591102-76591121 Msa0044940:intron 30.0%
TTATAAGAGATACCAGAACA+TGG + chr1_1:76591138-76591157 Msa0044940:intron 30.0%
CTCATCATCTTATCTTTCAT+AGG + chr1_1:76591303-76591322 Msa0044940:intron 30.0%
AGATCATCTAGTTGAAGTTA+GGG + chr1_1:76591455-76591474 Msa0044940:intron 30.0%
! GAGAACAATATAGTTTTCTC+TGG - chr1_1:76591593-76591612 None:intergenic 30.0%
! TAAGCAAATAGAGTTTTCTC+TGG - chr1_1:76591657-76591676 None:intergenic 30.0%
TCTTTCAATTTCAAAACCTG+AGG - chr1_1:76591837-76591856 None:intergenic 30.0%
GCCTCCTTCTAATTTATTTA+GGG + chr1_1:76591860-76591879 Msa0044940:CDS 30.0%
TCCCTAAATAAATTAGAAGG+AGG - chr1_1:76591864-76591883 None:intergenic 30.0%
TGTATATTCTTTATACGGCA+AGG - chr1_1:76591922-76591941 None:intergenic 30.0%
GAATATACAGATCCTTTCAA+AGG + chr1_1:76591933-76591952 Msa0044940:CDS 30.0%
! CAAGACATTCTAGAAAAAAC+AGG - chr1_1:76592129-76592148 None:intergenic 30.0%
TGAAGTGAAATTGAAATCTG+AGG + chr1_1:76592540-76592559 Msa0044940:CDS 30.0%
GAAGTGAAATTGAAATCTGA+GGG + chr1_1:76592541-76592560 Msa0044940:CDS 30.0%
ATTATCAAACATGTCAACGT+TGG - chr1_1:76592650-76592669 None:intergenic 30.0%
!!! TGTTCGAGTTTTGGAAAATA+GGG + chr1_1:76592708-76592727 Msa0044940:CDS 30.0%
TAAATAGGTATCCACAATAG+TGG + chr1_1:76592979-76592998 Msa0044940:intron 30.0%
AATGAGCGATGTATAATAGA+AGG - chr1_1:76593032-76593051 None:intergenic 30.0%
CCATTGAGTAATTTATTTCG+AGG - chr1_1:76593109-76593128 None:intergenic 30.0%
CCTCGAAATAAATTACTCAA+TGG + chr1_1:76593106-76593125 Msa0044940:intron 30.0%
ATGATATAGAGTTATCAGTG+GGG - chr1_1:76593133-76593152 None:intergenic 30.0%
ACTCAGAAGAAAATGAAAGA+TGG - chr1_1:76593226-76593245 None:intergenic 30.0%
ATCAAATATACACGTCACAA+AGG + chr1_1:76593261-76593280 Msa0044940:intron 30.0%
! GTACTTCCTGTTCTAATTTT+TGG - chr1_1:76593382-76593401 None:intergenic 30.0%
ACATGCACAAACTGAAAATA+CGG + chr1_1:76593466-76593485 Msa0044940:intron 30.0%
TACTAATATGGAGTTTGGTT+AGG - chr1_1:76593601-76593620 None:intergenic 30.0%
TAACCAAACTCCATATTAGT+AGG + chr1_1:76593600-76593619 Msa0044940:intron 30.0%
AACCAAACTCCATATTAGTA+GGG + chr1_1:76593601-76593620 Msa0044940:intron 30.0%
! ACCATACTAAAATTTGGGTT+AGG - chr1_1:76593846-76593865 None:intergenic 30.0%
GTTTGTCTTAGATCTCTTAT+TGG + chr1_1:76593872-76593891 Msa0044940:intron 30.0%
! CTAAGCTTTATAAGACTACA+TGG - chr1_1:76594071-76594090 None:intergenic 30.0%
!! CATGTAGTCTTATAAAGCTT+AGG + chr1_1:76594069-76594088 Msa0044940:intron 30.0%
CACATAAGACAAAAATCCTT+AGG + chr1_1:76594202-76594221 Msa0044940:intron 30.0%
GAAAGAAAGAAACACAATTC+TGG + chr1_1:76594326-76594345 Msa0044940:intron 30.0%
ATACCGATAATCATATCTGT+TGG - chr1_1:76594571-76594590 None:intergenic 30.0%
TTACCTTTAGATTTCTGACT+TGG - chr1_1:76595116-76595135 None:intergenic 30.0%
!! CATACTGATTCAAGCTTATA+TGG - chr1_1:76595288-76595307 None:intergenic 30.0%
CATATAAGCTTGAATCAGTA+TGG + chr1_1:76595286-76595305 Msa0044940:intron 30.0%
GATTAAGAGAAAAGAAATCC+GGG - chr1_1:76595457-76595476 None:intergenic 30.0%
CGATTAAGAGAAAAGAAATC+CGG - chr1_1:76595458-76595477 None:intergenic 30.0%
! TGTCATTAGCTTCTTTCAAA+TGG + chr1_1:76595717-76595736 Msa0044940:intron 30.0%
CAGATATCAGTGTTTCAATT+CGG - chr1_1:76595857-76595876 None:intergenic 30.0%
TTTATAATCTACGGTCTCAA+CGG - chr1_1:76595930-76595949 None:intergenic 30.0%
ACCTCGTAGTTTATAATCTA+CGG - chr1_1:76595939-76595958 None:intergenic 30.0%
! AAGAAAGTACAGATTGTCTA+CGG - chr1_1:76596053-76596072 None:intergenic 30.0%
ACAATCTGTACTTTCTTAGT+GGG + chr1_1:76596056-76596075 Msa0044940:intron 30.0%
AGTATATGAGAATCGAGTAT+GGG - chr1_1:76596144-76596163 None:intergenic 30.0%
AAGTATATGAGAATCGAGTA+TGG - chr1_1:76596145-76596164 None:intergenic 30.0%
AAAAATTATTCAATGCGGGA+CGG - chr1_1:76596253-76596272 None:intergenic 30.0%
GCATTACAATATTTCTCTAG+GGG - chr1_1:76596305-76596324 None:intergenic 30.0%
TGTTAAAGTGGACATATTGT+TGG - chr1_1:76596333-76596352 None:intergenic 30.0%
AAAGGAGCAACTAAATCAAT+CGG - chr1_1:76596365-76596384 None:intergenic 30.0%
ATTGTCTACAACAACCAAAT+AGG - chr1_1:76596650-76596669 None:intergenic 30.0%
!! ATAAAGGTTTCGTGTTGATT+TGG + chr1_1:76596725-76596744 Msa0044940:intron 30.0%
TTAAGATTGCAATCATGTGT+TGG + chr1_1:76596807-76596826 Msa0044940:intron 30.0%
TATATATGCTATGCTTGATG+TGG + chr1_1:76597128-76597147 Msa0044940:CDS 30.0%
ATATACTACTTTGCTCTCAA+AGG + chr1_1:76597231-76597250 Msa0044940:CDS 30.0%
! ATTCTTTTGTCAGATTCTCT+AGG + chr1_1:76597280-76597299 Msa0044940:intron 30.0%
TGTGTGTTTCATGAAATTGA+TGG + chr1_1:76597328-76597347 Msa0044940:intron 30.0%
GATGGATGTATTCAATTTAC+AGG + chr1_1:76597346-76597365 Msa0044940:intron 30.0%
ATATATTTACACTGGATCCT+TGG - chr1_1:76597382-76597401 None:intergenic 30.0%
TTAAGTCAGTTGATTAGGTT+CGG + chr1_1:76597430-76597449 Msa0044940:exon 30.0%
!! ATGTTCTTTTTAGCAACTGT+AGG + chr1_1:76597460-76597479 Msa0044940:three_prime_UTR 30.0%
GGTTCCATATTGTATTTATC+TGG + chr1_1:76597486-76597505 Msa0044940:three_prime_UTR 30.0%
! CCACATTTTGCAAAACATTA+AGG - chr1_1:76597696-76597715 None:intergenic 30.0%
! CCTTAATGTTTTGCAAAATG+TGG + chr1_1:76597693-76597712 Msa0044940:three_prime_UTR 30.0%
CAGTGTAGCATAGATAGTTA+GGG + chr1_1:76587750-76587769 Msa0044940:five_prime_UTR 35.0%
GCCATTGAAATTTCAAATGC+AGG - chr1_1:76587780-76587799 None:intergenic 35.0%
! ATTTGAAATTTCAATGGCGG+AGG + chr1_1:76587782-76587801 Msa0044940:exon 35.0%
ATTAAAGAGAAGAAGAGAGC+TGG + chr1_1:76588197-76588216 Msa0044940:CDS 35.0%
ACAGTTTATAGTTCGGAAGA+GGG + chr1_1:76588236-76588255 Msa0044940:CDS 35.0%
AGGAGGATATGAAGAAAAAG+TGG + chr1_1:76588381-76588400 Msa0044940:CDS 35.0%
ATGAAGAAAAAGTGGAAACG+TGG + chr1_1:76588389-76588408 Msa0044940:CDS 35.0%
GAAGAAGAAGGTCATAATTG+AGG + chr1_1:76588415-76588434 Msa0044940:CDS 35.0%
AGAAGAAACCTGGTAGAAAA+AGG + chr1_1:76588492-76588511 Msa0044940:CDS 35.0%
AAATGACGAAGATGAACAAG+AGG + chr1_1:76588538-76588557 Msa0044940:CDS 35.0%
AATGACGAAGATGAACAAGA+GGG + chr1_1:76588539-76588558 Msa0044940:CDS 35.0%
AGATCATGTTATGTCACCTT+TGG - chr1_1:76588731-76588750 None:intergenic 35.0%
CAATTATGCAAACACGTGTA+AGG - chr1_1:76588818-76588837 None:intergenic 35.0%
TACACGTGTTTGCATAATTG+TGG + chr1_1:76588818-76588837 Msa0044940:intron 35.0%
!! CAATTAACAGTGGATTGAAG+AGG + chr1_1:76588851-76588870 Msa0044940:intron 35.0%
! TGTCATTTCTCTGACATTGA+TGG - chr1_1:76588890-76588909 None:intergenic 35.0%
TCAATGTCAGAGAAATGACA+AGG + chr1_1:76588890-76588909 Msa0044940:CDS 35.0%
CAATGTCAGAGAAATGACAA+GGG + chr1_1:76588891-76588910 Msa0044940:CDS 35.0%
TGAGATGCACAAAATGCAAA+CGG + chr1_1:76588922-76588941 Msa0044940:CDS 35.0%
AGAAGGTAAAACAGAAGTGA+TGG - chr1_1:76588989-76589008 None:intergenic 35.0%
!! TTATTGGTTTGGATTGTGGA+TGG + chr1_1:76589094-76589113 Msa0044940:intron 35.0%
ACGATTGGATGAAGAACAAA+TGG + chr1_1:76589559-76589578 Msa0044940:CDS 35.0%
GAGATAGAAGCAAAGAGAAA+AGG + chr1_1:76589590-76589609 Msa0044940:CDS 35.0%
GGGAAAAAAGCAAGAAGAAA+TGG - chr1_1:76589650-76589669 None:intergenic 35.0%
AAAAAAGAGCCATGAAGCAT+GGG - chr1_1:76589701-76589720 None:intergenic 35.0%
AAAAAAAGAGCCATGAAGCA+TGG - chr1_1:76589702-76589721 None:intergenic 35.0%
!! CAGTACACACGCTTATTTTT+AGG - chr1_1:76589900-76589919 None:intergenic 35.0%
CTAAAAATAAGCGTGTGTAC+TGG + chr1_1:76589898-76589917 Msa0044940:CDS 35.0%
! GAGTTTGAGTTTATCTTCCA+AGG + chr1_1:76590133-76590152 Msa0044940:CDS 35.0%
TTCCACCATGAAGATAATCA+CGG - chr1_1:76590159-76590178 None:intergenic 35.0%
ATTTGTGAGTGGTCAAGATT+CGG + chr1_1:76590229-76590248 Msa0044940:CDS 35.0%
ACTAACTCAGAGATGCAATT+TGG - chr1_1:76590346-76590365 None:intergenic 35.0%
ATATCAGTTGCATTCCTAAC+AGG - chr1_1:76590451-76590470 None:intergenic 35.0%
! ACGTAAATTTAAAGCTCTGG+GGG - chr1_1:76590533-76590552 None:intergenic 35.0%
! GACGTAAATTTAAAGCTCTG+GGG - chr1_1:76590534-76590553 None:intergenic 35.0%
! TAAGACATTTTCAATGGCAC+TGG + chr1_1:76590563-76590582 Msa0044940:CDS 35.0%
! AATGTACAACTGGTTTAAGC+TGG + chr1_1:76590623-76590642 Msa0044940:CDS 35.0%
! ATGTACAACTGGTTTAAGCT+GGG + chr1_1:76590624-76590643 Msa0044940:CDS 35.0%
GCTTGGTATTTCTTATCTGA+CGG - chr1_1:76590675-76590694 None:intergenic 35.0%
! TACCAAGCACAAAACACTTT+TGG + chr1_1:76590687-76590706 Msa0044940:CDS 35.0%
!!! ATCCAAAAGTGTTTTGTGCT+TGG - chr1_1:76590692-76590711 None:intergenic 35.0%
AGGCAATTGATTGCTTAGAT+TGG + chr1_1:76590716-76590735 Msa0044940:CDS 35.0%
TCTGAGTATGCACAAGAAAA+AGG - chr1_1:76591438-76591457 None:intergenic 35.0%
CAGATCATCTAGTTGAAGTT+AGG + chr1_1:76591454-76591473 Msa0044940:intron 35.0%
TGGTCTGTTCAACTATAGAA+AGG - chr1_1:76591573-76591592 None:intergenic 35.0%
TGGTCTGTTCAACTATAGAA+AGG - chr1_1:76591573-76591592 None:intergenic 35.0%
!! TAGATGGACGTGTCATTTAA+AGG - chr1_1:76591700-76591719 None:intergenic 35.0%
CAGAAATTACAGGCAATAGA+TGG - chr1_1:76591716-76591735 None:intergenic 35.0%
AATGTGCACCAATTCTTTAC+TGG + chr1_1:76591777-76591796 Msa0044940:CDS 35.0%
ATGTGCACCAATTCTTTACT+GGG + chr1_1:76591778-76591797 Msa0044940:CDS 35.0%
TTGTGTACCCAGTAAAGAAT+TGG - chr1_1:76591788-76591807 None:intergenic 35.0%
TTCTTTACTGGGTACACAAA+TGG + chr1_1:76591789-76591808 Msa0044940:CDS 35.0%
GGCCTCCTTCTAATTTATTT+AGG + chr1_1:76591859-76591878 Msa0044940:CDS 35.0%
AGGTTAAGAATGCCTTTGAA+AGG - chr1_1:76591948-76591967 None:intergenic 35.0%
!!! TCTGGCTTTAGAACATTTTC+AGG - chr1_1:76591984-76592003 None:intergenic 35.0%
!! AAATGTTCTAAAGCCAGACA+TGG + chr1_1:76591986-76592005 Msa0044940:CDS 35.0%
!! AATGTTCTAAAGCCAGACAT+GGG + chr1_1:76591987-76592006 Msa0044940:CDS 35.0%
! TATTGCTTATGGATTTGCTC+AGG + chr1_1:76592022-76592041 Msa0044940:CDS 35.0%
ATTCAATTCTCTGTCTTTCC+TGG + chr1_1:76592103-76592122 Msa0044940:intron 35.0%
!! CATAATGCATTGGCTTACAA+AGG - chr1_1:76592240-76592259 None:intergenic 35.0%
!! CTTTTGGGTCAGTTTCTTAA+TGG - chr1_1:76592575-76592594 None:intergenic 35.0%
!! GCAAAATAGTGTTCGAGTTT+TGG + chr1_1:76592699-76592718 Msa0044940:CDS 35.0%
!!! GTGTTCGAGTTTTGGAAAAT+AGG + chr1_1:76592707-76592726 Msa0044940:CDS 35.0%
!!! GTTCGAGTTTTGGAAAATAG+GGG + chr1_1:76592709-76592728 Msa0044940:CDS 35.0%
AATAGGGGTGATTCTTTAGA+TGG + chr1_1:76592724-76592743 Msa0044940:CDS 35.0%
!! AGAAGCATTTCAGAGAGTTT+AGG + chr1_1:76592803-76592822 Msa0044940:CDS 35.0%
! GTAATTTATTTCGAGGTGCT+GGG - chr1_1:76593102-76593121 None:intergenic 35.0%
AGTAATTTATTTCGAGGTGC+TGG - chr1_1:76593103-76593122 None:intergenic 35.0%
AAACCAGTAATCAGCTAAAG+AGG + chr1_1:76593354-76593373 Msa0044940:intron 35.0%
! ACAATTCAACCTCTGAAGAA+AGG + chr1_1:76593421-76593440 Msa0044940:intron 35.0%
TTTCAGTTTGTGCATGTTGT+GGG - chr1_1:76593463-76593482 None:intergenic 35.0%
! TTTTCAGTTTGTGCATGTTG+TGG - chr1_1:76593464-76593483 None:intergenic 35.0%
CATGCACAAACTGAAAATAC+GGG + chr1_1:76593467-76593486 Msa0044940:intron 35.0%
TAATATGGAGTTTGGTTAGG+AGG - chr1_1:76593598-76593617 None:intergenic 35.0%
ACCAAACTCCATATTAGTAG+GGG + chr1_1:76593602-76593621 Msa0044940:intron 35.0%
! CAATTTTTGTGTTAACCCTC+AGG - chr1_1:76593644-76593663 None:intergenic 35.0%
ATAATGCAGGTGGTATAACA+TGG - chr1_1:76593686-76593705 None:intergenic 35.0%
TGTCTTATGTAGTGCTTATC+TGG + chr1_1:76593773-76593792 Msa0044940:intron 35.0%
GCAATCTTTACCTTATGAGT+CGG + chr1_1:76593800-76593819 Msa0044940:intron 35.0%
!! GCCTAACCCAAATTTTAGTA+TGG + chr1_1:76593842-76593861 Msa0044940:intron 35.0%
TGAAGAGCGGATGATAAATA+TGG - chr1_1:76593987-76594006 None:intergenic 35.0%
ATATTTATCATCCGCTCTTC+AGG + chr1_1:76593986-76594005 Msa0044940:intron 35.0%
! TAATTTGGTCTAGGACTAAC+TGG - chr1_1:76594128-76594147 None:intergenic 35.0%
CTCATGAAAAGACGAAAAAG+AGG + chr1_1:76594393-76594412 Msa0044940:intron 35.0%
! AATCCAAAATGTAAGTTGGG+TGG + chr1_1:76594450-76594469 Msa0044940:intron 35.0%
! ATCCAAAATGTAAGTTGGGT+GGG + chr1_1:76594451-76594470 Msa0044940:intron 35.0%
TAAGTACCACAATGGTTAGT+GGG - chr1_1:76594511-76594530 None:intergenic 35.0%
TTGAAGACTAAGTACCACAA+TGG - chr1_1:76594519-76594538 None:intergenic 35.0%
AGTTCAATGACCAGAAAGAA+AGG + chr1_1:76594664-76594683 Msa0044940:intron 35.0%
ATACCAGTCCAAAAAGTCAT+TGG + chr1_1:76594706-76594725 Msa0044940:intron 35.0%
! CTTACCAACCAATGACTTTT+TGG - chr1_1:76594717-76594736 None:intergenic 35.0%
TGAATAACCTACATTACCAC+AGG - chr1_1:76594844-76594863 None:intergenic 35.0%
AGAGCATAAGAGGAAACTTA+AGG + chr1_1:76594897-76594916 Msa0044940:intron 35.0%
!!! TTCGTATGTTTTTTGGGAAG+TGG + chr1_1:76594948-76594967 Msa0044940:intron 35.0%
!!! TCGTATGTTTTTTGGGAAGT+GGG + chr1_1:76594949-76594968 Msa0044940:intron 35.0%
TGGTGACTGTTTATATGTGT+TGG - chr1_1:76594991-76595010 None:intergenic 35.0%
ACTGTCAAGTGTCAACAAAA+TGG - chr1_1:76595011-76595030 None:intergenic 35.0%
AGCTTCTGAATAAAAGTCCA+AGG - chr1_1:76595057-76595076 None:intergenic 35.0%
! TGGACTTTTATTCAGAAGCT+AGG + chr1_1:76595057-76595076 Msa0044940:CDS 35.0%
!! TTTAGATTTCTGACTTGGTG+AGG - chr1_1:76595111-76595130 None:intergenic 35.0%
TCACCAAGTCAGAAATCTAA+AGG + chr1_1:76595110-76595129 Msa0044940:CDS 35.0%
TTCAAGCTTATATGGGTATG+AGG - chr1_1:76595280-76595299 None:intergenic 35.0%
!!! ACTTACTCACTTTTTATGCC+CGG + chr1_1:76595436-76595455 Msa0044940:intron 35.0%
GATGCATGACTACAAAAAGA+CGG - chr1_1:76595517-76595536 None:intergenic 35.0%
! CTTTTTGTAGTCATGCATCA+AGG + chr1_1:76595518-76595537 Msa0044940:intron 35.0%
TTTGTCTCACCTGAAAATGT+TGG + chr1_1:76595552-76595571 Msa0044940:CDS 35.0%
! ATCCTGCTGTTTATATGTGT+TGG + chr1_1:76595675-76595694 Msa0044940:intron 35.0%
TACCAACACATATAAACAGC+AGG - chr1_1:76595680-76595699 None:intergenic 35.0%
TAGAACAAGTCGTCTTGATT+GGG + chr1_1:76595787-76595806 Msa0044940:intron 35.0%
TTTAGGTCACTCCAAATGTT+TGG + chr1_1:76595813-76595832 Msa0044940:intron 35.0%
ACCGTAGATTATAAACTACG+AGG + chr1_1:76595935-76595954 Msa0044940:intron 35.0%
GACAATCTGTACTTTCTTAG+TGG + chr1_1:76596055-76596074 Msa0044940:intron 35.0%
TGTACTTTCTTAGTGGGATA+AGG + chr1_1:76596062-76596081 Msa0044940:intron 35.0%
TTTCTTAGTGGGATAAGGTT+TGG + chr1_1:76596067-76596086 Msa0044940:intron 35.0%
GTATATGAGAATCGAGTATG+GGG - chr1_1:76596143-76596162 None:intergenic 35.0%
AAAATTATTCAATGCGGGAC+GGG - chr1_1:76596252-76596271 None:intergenic 35.0%
CGGTCTAACAAATGTTAAAG+TGG - chr1_1:76596345-76596364 None:intergenic 35.0%
!!! ATAGTTTTATGCATTCGGGA+CGG + chr1_1:76596452-76596471 Msa0044940:intron 35.0%
! TTTTCCCCGATTTCAAAACA+CGG - chr1_1:76596531-76596550 None:intergenic 35.0%
! GAGCTCTTAGTGATTTTCAA+AGG - chr1_1:76596695-76596714 None:intergenic 35.0%
! GAGCTCTAGTAAAGACATAA+AGG + chr1_1:76596709-76596728 Msa0044940:intron 35.0%
GCTTGATGTGGTTAACAAAT+TGG + chr1_1:76597140-76597159 Msa0044940:CDS 35.0%
!! CTTTTTAGCAACTGTAGGAA+TGG + chr1_1:76597465-76597484 Msa0044940:three_prime_UTR 35.0%
TGCGCCAGATAAATACAATA+TGG - chr1_1:76597493-76597512 None:intergenic 35.0%
CACAACAGTACAAAACAAGT+CGG - chr1_1:76597546-76597565 None:intergenic 35.0%
TCATGCTCACATCAAATTCT+TGG + chr1_1:76597604-76597623 Msa0044940:three_prime_UTR 35.0%
GCAGTGTAGCATAGATAGTT+AGG + chr1_1:76587749-76587768 Msa0044940:five_prime_UTR 40.0%
TCACTGTATATGTGACTGTG+TGG - chr1_1:76587818-76587837 None:intergenic 40.0%
! GATCAGGAATGGATTCATCT+GGG - chr1_1:76587869-76587888 None:intergenic 40.0%
! TGATCAGGAATGGATTCATC+TGG - chr1_1:76587870-76587889 None:intergenic 40.0%
!! TATCGGTGTTAGAGCTGAAA+CGG + chr1_1:76587968-76587987 Msa0044940:CDS 40.0%
TATGGATGTTGGCGCAAAAA+CGG + chr1_1:76588067-76588086 Msa0044940:CDS 40.0%
GACAGTTTATAGTTCGGAAG+AGG + chr1_1:76588235-76588254 Msa0044940:CDS 40.0%
AAGAGGGTGAGGAAAAGAAT+TGG + chr1_1:76588252-76588271 Msa0044940:CDS 40.0%
AGAGGGTGAGGAAAAGAATT+GGG + chr1_1:76588253-76588272 Msa0044940:CDS 40.0%
GGAAGATTACGTGTCAGATT+TGG + chr1_1:76588358-76588377 Msa0044940:CDS 40.0%
AGATTACGTGTCAGATTTGG+AGG + chr1_1:76588361-76588380 Msa0044940:CDS 40.0%
AGAAAAAGTGGAAACGTGGT+AGG + chr1_1:76588393-76588412 Msa0044940:CDS 40.0%
GAATGATGAAGCTGAACAAG+AGG + chr1_1:76588448-76588467 Msa0044940:CDS 40.0%
! CCTACTTTCCTTTTTCTACC+AGG - chr1_1:76588503-76588522 None:intergenic 40.0%
CCTGGTAGAAAAAGGAAAGT+AGG + chr1_1:76588500-76588519 Msa0044940:CDS 40.0%
ATGACGAAGATGAACAAGAG+GGG + chr1_1:76588540-76588559 Msa0044940:CDS 40.0%
! CTGACATTGATGGCACATTA+AGG - chr1_1:76588880-76588899 None:intergenic 40.0%
!!! GTGGATGGTGATATTTTGAC+CGG + chr1_1:76589109-76589128 Msa0044940:intron 40.0%
!! TTATCGGTTTGGATTGTGGA+TGG + chr1_1:76589227-76589246 Msa0044940:intron 40.0%
!!! GTGGATGGTGATATTTTGAC+CGG + chr1_1:76589109-76589128 Msa0044940:intron 40.0%
! AAGGTATCCTCACTTGAAAG+AGG + chr1_1:76589289-76589308 Msa0044940:intron 40.0%
TGAAGAACAAATGGTCGAGA+AGG + chr1_1:76589568-76589587 Msa0044940:CDS 40.0%
! AAATAAGCGTGTGTACTGGT+AGG + chr1_1:76589902-76589921 Msa0044940:intron 40.0%
! AATAAGCGTGTGTACTGGTA+GGG + chr1_1:76589903-76589922 Msa0044940:intron 40.0%
! AGCATTTTGTACAGCTTCTG+TGG - chr1_1:76590042-76590061 None:intergenic 40.0%
! TTCATGGTGGAAAAGAAGAG+AGG + chr1_1:76590167-76590186 Msa0044940:CDS 40.0%
! TCATGGTGGAAAAGAAGAGA+GGG + chr1_1:76590168-76590187 Msa0044940:CDS 40.0%
TTTGTGAGTGGTCAAGATTC+GGG + chr1_1:76590230-76590249 Msa0044940:CDS 40.0%
ACCATGACCACAATCATCAT+CGG - chr1_1:76590296-76590315 None:intergenic 40.0%
AACTCAGAGATGCAATTTGG+TGG - chr1_1:76590343-76590362 None:intergenic 40.0%
AATTAGGCTTCAAGATGCAG+AGG + chr1_1:76590393-76590412 Msa0044940:CDS 40.0%
! GTTCTTGTTTGAAGCCTGTT+AGG + chr1_1:76590434-76590453 Msa0044940:CDS 40.0%
AGTTGTCACTGGAATCTTCA+CGG - chr1_1:76590501-76590520 None:intergenic 40.0%
GGAATACAAGAAGTTGTCAC+TGG - chr1_1:76590512-76590531 None:intergenic 40.0%
! GCACAAAACACTTTTGGATG+TGG + chr1_1:76590693-76590712 Msa0044940:CDS 40.0%
! CAAAACACTTTTGGATGTGG+AGG + chr1_1:76590696-76590715 Msa0044940:CDS 40.0%
TGATTGCTTAGATTGGTGTG+AGG + chr1_1:76590723-76590742 Msa0044940:CDS 40.0%
!!! CTGTTCCAACAGTTTTTTGG+CGG + chr1_1:76591070-76591089 Msa0044940:intron 40.0%
ATATGACGTTAGCCATGTTC+TGG - chr1_1:76591153-76591172 None:intergenic 40.0%
GACGAGCGAAGTTATAACTA+AGG - chr1_1:76591253-76591272 None:intergenic 40.0%
GGTAGATCAAGCGAAAAAAC+AGG - chr1_1:76591356-76591375 None:intergenic 40.0%
!! AGGGCAAGAAGAAAGTATCT+GGG - chr1_1:76591377-76591396 None:intergenic 40.0%
!! AAGGGCAAGAAGAAAGTATC+TGG - chr1_1:76591378-76591397 None:intergenic 40.0%
ATAGAAACCAGAGGATGCAA+GGG - chr1_1:76591396-76591415 None:intergenic 40.0%
AATAGAAACCAGAGGATGCA+AGG - chr1_1:76591397-76591416 None:intergenic 40.0%
TTGCGTTGTTGAATGAATGC+AGG + chr1_1:76591746-76591765 Msa0044940:intron 40.0%
CCACTGTAATATGTCTGATG+CGG + chr1_1:76592076-76592095 Msa0044940:CDS 40.0%
! CATTCTAGAAAAAACAGGCC+AGG - chr1_1:76592124-76592143 None:intergenic 40.0%
CCAAACAGCTCATAATGCAT+TGG - chr1_1:76592250-76592269 None:intergenic 40.0%
CCAATGCATTATGAGCTGTT+TGG + chr1_1:76592247-76592266 Msa0044940:intron 40.0%
CTACATGGTGATAATCGAGA+TGG + chr1_1:76592619-76592638 Msa0044940:CDS 40.0%
! TTGCTCGTCTGAAGCATTTA+TGG - chr1_1:76592683-76592702 None:intergenic 40.0%
ATTCTTTAGATGGTGCTCTC+TGG + chr1_1:76592734-76592753 Msa0044940:CDS 40.0%
TTCTTTAGATGGTGCTCTCT+GGG + chr1_1:76592735-76592754 Msa0044940:CDS 40.0%
!!! GTGCTCTCTGGGATATTTTT+CGG + chr1_1:76592746-76592765 Msa0044940:CDS 40.0%
!! CTGCTTTAAAGGAGAGCAAT+GGG - chr1_1:76592833-76592852 None:intergenic 40.0%
AAATGGGGAAACCACTATTG+TGG - chr1_1:76592993-76593012 None:intergenic 40.0%
ACAATAGTGGTTTCCCCATT+TGG + chr1_1:76592992-76593011 Msa0044940:intron 40.0%
CAATAGTGGTTTCCCCATTT+GGG + chr1_1:76592993-76593012 Msa0044940:intron 40.0%
ACCCACTTAAGAACCCAAAT+GGG - chr1_1:76593009-76593028 None:intergenic 40.0%
! GAGGTGCCAAAAATTAGAAC+AGG + chr1_1:76593373-76593392 Msa0044940:intron 40.0%
GAGACTATTCCTTTCTTCAG+AGG - chr1_1:76593433-76593452 None:intergenic 40.0%
TGTTTAATGAGCTCCACCAA+AGG + chr1_1:76593506-76593525 Msa0044940:intron 40.0%
TTGAACAATTCGTCCTTTGG+TGG - chr1_1:76593522-76593541 None:intergenic 40.0%
CTCTTGAACAATTCGTCCTT+TGG - chr1_1:76593525-76593544 None:intergenic 40.0%
CCAAACTCCATATTAGTAGG+GGG + chr1_1:76593603-76593622 Msa0044940:intron 40.0%
! ATCTGAAGCATGGATAATGC+AGG - chr1_1:76593699-76593718 None:intergenic 40.0%
!! ACCTTATGAGTCGGTTTTGT+AGG + chr1_1:76593809-76593828 Msa0044940:intron 40.0%
!! CCTTATGAGTCGGTTTTGTA+GGG + chr1_1:76593810-76593829 Msa0044940:intron 40.0%
ATGTGCATTCATGTTCGTGA+GGG + chr1_1:76593938-76593957 Msa0044940:intron 40.0%
AATGAAGACACACATCCTCA+AGG + chr1_1:76594170-76594189 Msa0044940:intron 40.0%
TATGTGCGAACAAATCCTTG+AGG - chr1_1:76594188-76594207 None:intergenic 40.0%
CTCATGAAAAGACGAAGAAG+AGG + chr1_1:76594288-76594307 Msa0044940:intron 40.0%
!! GAAGAGGAAGCTTTGTTTGT+AGG + chr1_1:76594304-76594323 Msa0044940:intron 40.0%
! TCCAAAATGTAAGTTGGGTG+GGG + chr1_1:76594452-76594471 Msa0044940:intron 40.0%
ATATTCCCCACTAACCATTG+TGG + chr1_1:76594502-76594521 Msa0044940:intron 40.0%
AAGTACCACAATGGTTAGTG+GGG - chr1_1:76594510-76594529 None:intergenic 40.0%
CTAAGTACCACAATGGTTAG+TGG - chr1_1:76594512-76594531 None:intergenic 40.0%
! CAACCAATGACTTTTTGGAC+TGG - chr1_1:76594712-76594731 None:intergenic 40.0%
CAGTCCAAAAAGTCATTGGT+TGG + chr1_1:76594710-76594729 Msa0044940:intron 40.0%
CCTTTGTATACAGCAGCAAT+CGG - chr1_1:76594764-76594783 None:intergenic 40.0%
! ACATTAGCCTGTGGTAATGT+AGG + chr1_1:76594834-76594853 Msa0044940:intron 40.0%
ATGCTCTCGAGTCAGATAAA+AGG - chr1_1:76594884-76594903 None:intergenic 40.0%
GCATAAGAGGAAACTTAAGG+AGG + chr1_1:76594900-76594919 Msa0044940:intron 40.0%
AGGAAACTTAAGGAGGAGTA+TGG + chr1_1:76594907-76594926 Msa0044940:intron 40.0%
TTGTAGTCATGCATCAAGGT+TGG + chr1_1:76595522-76595541 Msa0044940:intron 40.0%
! AAGCACTCACCAACATTTTC+AGG - chr1_1:76595564-76595583 None:intergenic 40.0%
TACGGAATTCCTCAGTCAAA+CGG - chr1_1:76595587-76595606 None:intergenic 40.0%
TGTGGTTTATCGGAAGCTTA+CGG - chr1_1:76595605-76595624 None:intergenic 40.0%
! CGACTTGTTCTAGTAGGTTT+AGG - chr1_1:76595779-76595798 None:intergenic 40.0%
! TCAAGACGACTTGTTCTAGT+AGG - chr1_1:76595785-76595804 None:intergenic 40.0%
CTAGAACAAGTCGTCTTGAT+TGG + chr1_1:76595786-76595805 Msa0044940:intron 40.0%
! ATAAGGTTTGGTTGTAGGCA+TGG + chr1_1:76596079-76596098 Msa0044940:intron 40.0%
AAATTATTCAATGCGGGACG+GGG - chr1_1:76596251-76596270 None:intergenic 40.0%
!!! TAGTTTTATGCATTCGGGAC+GGG + chr1_1:76596453-76596472 Msa0044940:intron 40.0%
CGATTTCAAAACACGGGTAT+GGG - chr1_1:76596524-76596543 None:intergenic 40.0%
!!! CCATACCCGTGTTTTGAAAT+CGG + chr1_1:76596522-76596541 Msa0044940:intron 40.0%
!!! CATACCCGTGTTTTGAAATC+GGG + chr1_1:76596523-76596542 Msa0044940:intron 40.0%
!!! ATACCCGTGTTTTGAAATCG+GGG + chr1_1:76596524-76596543 Msa0044940:intron 40.0%
TTTCCCCGATTTCAAAACAC+GGG - chr1_1:76596530-76596549 None:intergenic 40.0%
!! TTTTGACTGGGTTTGGGTAT+GGG - chr1_1:76596560-76596579 None:intergenic 40.0%
ATACCCAAACCCAGTCAAAA+CGG + chr1_1:76596560-76596579 Msa0044940:intron 40.0%
AAAACCCGTCAAATTGGGTT+TGG + chr1_1:76596585-76596604 Msa0044940:intron 40.0%
!! GTTTTGTTGCCATGCCTATT+TGG + chr1_1:76596633-76596652 Msa0044940:intron 40.0%
CTACAACAACCAAATAGGCA+TGG - chr1_1:76596645-76596664 None:intergenic 40.0%
ACCAGCGACTGGTATTTATA+AGG + chr1_1:76596950-76596969 Msa0044940:intron 40.0%
TCCTTATAAATACCAGTCGC+TGG - chr1_1:76596954-76596973 None:intergenic 40.0%
CCAAAGAAACAGCAACAATC+AGG - chr1_1:76597088-76597107 None:intergenic 40.0%
!! CCTGATTGTTGCTGTTTCTT+TGG + chr1_1:76597085-76597104 Msa0044940:intron 40.0%
!! GTTGCTGTTTCTTTGGTAAC+AGG + chr1_1:76597092-76597111 Msa0044940:intron 40.0%
CAAATTCATAACCAAGGGAG+AGG - chr1_1:76597194-76597213 None:intergenic 40.0%
TTACAGGTTTGGAGAAACCA+AGG + chr1_1:76597362-76597381 Msa0044940:intron 40.0%
TTATCTGGCGCAACTTGATT+AGG + chr1_1:76597501-76597520 Msa0044940:three_prime_UTR 40.0%
TCGACGATCATGATCAGGAA+TGG - chr1_1:76587880-76587899 None:intergenic 45.0%
GTTTCTCGACGATCATGATC+AGG - chr1_1:76587885-76587904 None:intergenic 45.0%
ACACAACCTACTGCCAATGT+TGG + chr1_1:76587903-76587922 Msa0044940:CDS 45.0%
GCGTTGTTGAACAACGATGA+AGG + chr1_1:76587990-76588009 Msa0044940:CDS 45.0%
TTCCGTTGAAGCTGATGACA+TGG + chr1_1:76588118-76588137 Msa0044940:CDS 45.0%
TGCCATGTCATCAGCTTCAA+CGG - chr1_1:76588123-76588142 None:intergenic 45.0%
! CAATGCTGAACAAGAGTGTG+AGG + chr1_1:76588163-76588182 Msa0044940:CDS 45.0%
TTATAGTTCGGAAGAGGGTG+AGG + chr1_1:76588241-76588260 Msa0044940:CDS 45.0%
GGTGAGGAAAAGAATTGGGA+AGG + chr1_1:76588257-76588276 Msa0044940:CDS 45.0%
! GAAGAAGGAGGGTTTTCTTC+CGG + chr1_1:76588290-76588309 Msa0044940:CDS 45.0%
TTGCCTCTTTCTCACACAAC+CGG - chr1_1:76588312-76588331 None:intergenic 45.0%
GTTGTGTGAGAAAGAGGCAA+AGG + chr1_1:76588312-76588331 Msa0044940:CDS 45.0%
TTACGTGTCAGATTTGGAGG+AGG + chr1_1:76588364-76588383 Msa0044940:CDS 45.0%
GAAACGTGGTAGGAAGAAGA+AGG + chr1_1:76588403-76588422 Msa0044940:CDS 45.0%
TGATGAAGCTGAACAAGAGG+AGG + chr1_1:76588451-76588470 Msa0044940:CDS 45.0%
AAGACAGAGCAGAAGAAACC+TGG + chr1_1:76588482-76588501 Msa0044940:CDS 45.0%
TGACGAAGATGAACAAGAGG+GGG + chr1_1:76588541-76588560 Msa0044940:CDS 45.0%
GATGAACAAGAGGGGGAAAA+TGG + chr1_1:76588548-76588567 Msa0044940:CDS 45.0%
TCAGAGAAATGACAAGGGCA+GGG + chr1_1:76588896-76588915 Msa0044940:CDS 45.0%
GTATCCTCACTTGAAAGAGG+AGG + chr1_1:76589292-76589311 Msa0044940:CDS 45.0%
! ACTTCCTCCTCTTTCAAGTG+AGG - chr1_1:76589299-76589318 None:intergenic 45.0%
TTGCAATTACCACAGCACAC+TGG - chr1_1:76589335-76589354 None:intergenic 45.0%
! GTGATCATCTGGTTCACTAC+AGG + chr1_1:76589451-76589470 Msa0044940:intron 45.0%
CTCGAACTCATGGTTGTTGT+TGG - chr1_1:76589498-76589517 None:intergenic 45.0%
!!! CTTTTGGGACGAACATTGCA+GGG + chr1_1:76589835-76589854 Msa0044940:intron 45.0%
! ATAAGCGTGTGTACTGGTAG+GGG + chr1_1:76589904-76589923 Msa0044940:intron 45.0%
TGTTGTTGTGAGCTTCGTTG+TGG + chr1_1:76590082-76590101 Msa0044940:CDS 45.0%
GTTGTTGTGAGCTTCGTTGT+GGG + chr1_1:76590083-76590102 Msa0044940:CDS 45.0%
CATGAAGATAATCACGGCCT+TGG - chr1_1:76590153-76590172 None:intergenic 45.0%
CAAGGCCGTGATTATCTTCA+TGG + chr1_1:76590151-76590170 Msa0044940:CDS 45.0%
CTTGACCACTCACAAATCTC+AGG - chr1_1:76590226-76590245 None:intergenic 45.0%
!!! TCATCATCGGCTTTTGGACA+GGG - chr1_1:76590283-76590302 None:intergenic 45.0%
!!! ATCATCATCGGCTTTTGGAC+AGG - chr1_1:76590284-76590303 None:intergenic 45.0%
!!! CCACAATCATCATCGGCTTT+TGG - chr1_1:76590289-76590308 None:intergenic 45.0%
CCAAAAGCCGATGATGATTG+TGG + chr1_1:76590286-76590305 Msa0044940:CDS 45.0%
GAAGTATGCTTCTCAGTTCG+AGG - chr1_1:76590321-76590340 None:intergenic 45.0%
GTTGTCACTGGAATCTTCAC+GGG - chr1_1:76590500-76590519 None:intergenic 45.0%
! TTTCAATGGCACTGGAGCAA+AGG + chr1_1:76590571-76590590 Msa0044940:CDS 45.0%
! TTCAATGGCACTGGAGCAAA+GGG + chr1_1:76590572-76590591 Msa0044940:CDS 45.0%
ACTGTCCGCCAAAAAACTGT+TGG - chr1_1:76591078-76591097 None:intergenic 45.0%
TTTCTAGATGGTCTGCTGTC+TGG + chr1_1:76591114-76591133 Msa0044940:intron 45.0%
TTCTAGATGGTCTGCTGTCT+GGG + chr1_1:76591115-76591134 Msa0044940:intron 45.0%
GAGGCCAATTAAGCCAATCT+GGG - chr1_1:76591818-76591837 None:intergenic 45.0%
TGAGGCCAATTAAGCCAATC+TGG - chr1_1:76591819-76591838 None:intergenic 45.0%
!! AGATTGGCTTAATTGGCCTC+AGG + chr1_1:76591818-76591837 Msa0044940:CDS 45.0%
ATGAACTCAGCACAATGACG+AGG - chr1_1:76591894-76591913 None:intergenic 45.0%
TTTCAGGCAACTTCACAGCA+AGG - chr1_1:76591968-76591987 None:intergenic 45.0%
!!! TATGTTTTTGGGCCCATGTC+TGG - chr1_1:76592002-76592021 None:intergenic 45.0%
! TATGGATTTGCTCAGGAGCT+TGG + chr1_1:76592029-76592048 Msa0044940:CDS 45.0%
CCGCATCAGACATATTACAG+TGG - chr1_1:76592079-76592098 None:intergenic 45.0%
! TTGGAAGGTGCAGAGTTTCT+AGG + chr1_1:76592202-76592221 Msa0044940:intron 45.0%
!! GTCTTGCTCAAGGTGCTTTT+GGG - chr1_1:76592590-76592609 None:intergenic 45.0%
!! TGTCTTGCTCAAGGTGCTTT+TGG - chr1_1:76592591-76592610 None:intergenic 45.0%
!! CTGGGATATTTTTCGGAGAG+AGG + chr1_1:76592753-76592772 Msa0044940:CDS 45.0%
GAGAGAGGATGTACCTGAAT+TGG + chr1_1:76592768-76592787 Msa0044940:CDS 45.0%
AGAGGATGTACCTGAATTGG+AGG + chr1_1:76592771-76592790 Msa0044940:CDS 45.0%
!! CCTGCTTTAAAGGAGAGCAA+TGG - chr1_1:76592834-76592853 None:intergenic 45.0%
!! CCATTGCTCTCCTTTAAAGC+AGG + chr1_1:76592831-76592850 Msa0044940:CDS 45.0%
GTCGGCTACATGGAAAACAA+AGG - chr1_1:76592867-76592886 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr1_1:76592889-76592908 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr1_1:76592890-76592909 None:intergenic 45.0%
! TCCCCATTTGGGTTCTTAAG+TGG + chr1_1:76593004-76593023 Msa0044940:intron 45.0%
CCCACTTAAGAACCCAAATG+GGG - chr1_1:76593008-76593027 None:intergenic 45.0%
! CCCCATTTGGGTTCTTAAGT+GGG + chr1_1:76593005-76593024 Msa0044940:intron 45.0%
GACCCACTTAAGAACCCAAA+TGG - chr1_1:76593010-76593029 None:intergenic 45.0%
!! TTTATTTCGAGGTGCTGGGT+TGG - chr1_1:76593098-76593117 None:intergenic 45.0%
GCACCTCTTTAGCTGATTAC+TGG - chr1_1:76593360-76593379 None:intergenic 45.0%
AGTTTGTGCATGTTGTGGGA+GGG - chr1_1:76593459-76593478 None:intergenic 45.0%
AGAACCTGAGTTCGATTCCT+GGG + chr1_1:76593543-76593562 Msa0044940:intron 45.0%
TTCCTGGGTGGAGTAATTGT+TGG + chr1_1:76593558-76593577 Msa0044940:intron 45.0%
TACCAACAATTACTCCACCC+AGG - chr1_1:76593563-76593582 None:intergenic 45.0%
CCCCCTACTAATATGGAGTT+TGG - chr1_1:76593606-76593625 None:intergenic 45.0%
TGTTAACCCTCAGGTTCCTA+GGG - chr1_1:76593635-76593654 None:intergenic 45.0%
TGAAGCATGGATAATGCAGG+TGG - chr1_1:76593696-76593715 None:intergenic 45.0%
TTATCCATGCTTCAGATGCC+TGG + chr1_1:76593702-76593721 Msa0044940:intron 45.0%
! CCCTACAAAACCGACTCATA+AGG - chr1_1:76593813-76593832 None:intergenic 45.0%
! ACATCTAGAGCGTGGACAAA+TGG - chr1_1:76593922-76593941 None:intergenic 45.0%
! ATGAATGCACATCTAGAGCG+TGG - chr1_1:76593930-76593949 None:intergenic 45.0%
GATGTGCATTCATGTTCGTG+AGG + chr1_1:76593937-76593956 Msa0044940:intron 45.0%
AGGGAAAAACACCTGAAGAG+CGG - chr1_1:76594000-76594019 None:intergenic 45.0%
GAAGGGGCTATTGAATCCTA+AGG - chr1_1:76594221-76594240 None:intergenic 45.0%
TAGGATTCAATAGCCCCTTC+TGG + chr1_1:76594221-76594240 Msa0044940:intron 45.0%
AGGATTCAATAGCCCCTTCT+GGG + chr1_1:76594222-76594241 Msa0044940:intron 45.0%
! ACACAATTCTGGGAATCTCC+AGG + chr1_1:76594337-76594356 Msa0044940:intron 45.0%
! CACAATTCTGGGAATCTCCA+GGG + chr1_1:76594338-76594357 Msa0044940:intron 45.0%
! CCAAAATGTAAGTTGGGTGG+GGG + chr1_1:76594453-76594472 Msa0044940:intron 45.0%
CCGATTGCTGCTGTATACAA+AGG + chr1_1:76594761-76594780 Msa0044940:intron 45.0%
TGCTGCTGTATACAAAGGAC+TGG + chr1_1:76594766-76594785 Msa0044940:intron 45.0%
! TCTTGATGGACATTAGCCTG+TGG + chr1_1:76594825-76594844 Msa0044940:intron 45.0%
TAAAAGGTCTGGTCGTGGAT+GGG - chr1_1:76594868-76594887 None:intergenic 45.0%
ATAAAAGGTCTGGTCGTGGA+TGG - chr1_1:76594869-76594888 None:intergenic 45.0%
TCAGATAAAAGGTCTGGTCG+TGG - chr1_1:76594873-76594892 None:intergenic 45.0%
CTCGAGTCAGATAAAAGGTC+TGG - chr1_1:76594879-76594898 None:intergenic 45.0%
! ATCTGACTCGAGAGCATAAG+AGG + chr1_1:76594887-76594906 Msa0044940:intron 45.0%
!!! ATGTTTTTTGGGAAGTGGGC+TGG + chr1_1:76594953-76594972 Msa0044940:intron 45.0%
TGACAGTCACCATTGCTTGT+AGG + chr1_1:76595024-76595043 Msa0044940:intron 45.0%
!!! GATGCTGTTTTCATTCCTGC+CGG + chr1_1:76595081-76595100 Msa0044940:CDS 45.0%
GTAAGCTTCCGATAAACCAC+AGG + chr1_1:76595604-76595623 Msa0044940:CDS 45.0%
! TTGGTGGACCTGTGGTTTAT+CGG - chr1_1:76595615-76595634 None:intergenic 45.0%
TCGTCTTGATTGGGAGCTTT+AGG + chr1_1:76595796-76595815 Msa0044940:intron 45.0%
! GTGGGATAAGGTTTGGTTGT+AGG + chr1_1:76596074-76596093 Msa0044940:intron 45.0%
TTTGGTTGTAGGCATGGCAA+TGG + chr1_1:76596085-76596104 Msa0044940:intron 45.0%
TTGGTTGTAGGCATGGCAAT+GGG + chr1_1:76596086-76596105 Msa0044940:intron 45.0%
ATGAGAATCGAGTATGGGGA+CGG - chr1_1:76596139-76596158 None:intergenic 45.0%
TTCAATTTCCCATCCCCGTT+GGG - chr1_1:76596187-76596206 None:intergenic 45.0%
TTCAAAACACGGGTATGGGA+CGG - chr1_1:76596520-76596539 None:intergenic 45.0%
CCGATTTCAAAACACGGGTA+TGG - chr1_1:76596525-76596544 None:intergenic 45.0%
!!! GTTTTGACTGGGTTTGGGTA+TGG - chr1_1:76596561-76596580 None:intergenic 45.0%
TACCCAAACCCAGTCAAAAC+GGG + chr1_1:76596561-76596580 Msa0044940:intron 45.0%
!!! TTCCCGTTTTGACTGGGTTT+GGG - chr1_1:76596566-76596585 None:intergenic 45.0%
!!! TTTCCCGTTTTGACTGGGTT+TGG - chr1_1:76596567-76596586 None:intergenic 45.0%
!!! GGGTTTTTCCCGTTTTGACT+GGG - chr1_1:76596572-76596591 None:intergenic 45.0%
ACGGGAAAAACCCGTCAAAT+TGG + chr1_1:76596579-76596598 Msa0044940:intron 45.0%
CGGGAAAAACCCGTCAAATT+GGG + chr1_1:76596580-76596599 Msa0044940:intron 45.0%
CGAACCAAACCCAATTTGAC+GGG - chr1_1:76596592-76596611 None:intergenic 45.0%
CCGAACCAAACCCAATTTGA+CGG - chr1_1:76596593-76596612 None:intergenic 45.0%
! CCGTCAAATTGGGTTTGGTT+CGG + chr1_1:76596590-76596609 Msa0044940:intron 45.0%
! CGTCAAATTGGGTTTGGTTC+GGG + chr1_1:76596591-76596610 Msa0044940:intron 45.0%
!! AAATTGGGTTTGGTTCGGGT+GGG + chr1_1:76596595-76596614 Msa0044940:intron 45.0%
TGCAATCATGTGTTGGAGTC+AGG + chr1_1:76596814-76596833 Msa0044940:intron 45.0%
! CATGTGTTGGAGTCAGGTTT+TGG + chr1_1:76596820-76596839 Msa0044940:intron 45.0%
CCAATAAGCAACTGCTGACA+CGG - chr1_1:76597047-76597066 None:intergenic 45.0%
CGTGTCAGCAGTTGCTTATT+GGG + chr1_1:76597045-76597064 Msa0044940:intron 45.0%
ATTGCAAACTTCCTCTCCCT+TGG + chr1_1:76597180-76597199 Msa0044940:CDS 45.0%
CTACTTTGCTCTCAAAGGCA+TGG + chr1_1:76597236-76597255 Msa0044940:CDS 45.0%
! GTGTCACTAACTCGTATACC+TGG + chr1_1:76597573-76597592 Msa0044940:three_prime_UTR 45.0%
GTGAGCATGAATTAGCATCC+AGG - chr1_1:76597594-76597613 None:intergenic 45.0%
!! TGTTTAAAAAATATTATTAT+TGG + chr1_1:76589078-76589097 Msa0044940:intron 5.0%
!!! ATTTTATTTTAATTCATTTA+CGG + chr1_1:76590863-76590882 Msa0044940:intron 5.0%
!! TTAATTATATAAAAATTGAT+TGG + chr1_1:76595996-76596015 Msa0044940:intron 5.0%
CAAAGTCACACTCACCGTTC+CGG + chr1_1:76587842-76587861 Msa0044940:CDS 50.0%
! GGAATGGATTCATCTGGGTC+CGG - chr1_1:76587864-76587883 None:intergenic 50.0%
GATGACGTGGCACAAGCTAT+CGG + chr1_1:76587951-76587970 Msa0044940:CDS 50.0%
! CAACGATGAAGGTGATGACG+TGG + chr1_1:76588001-76588020 Msa0044940:CDS 50.0%
!! AACGGTGGTGTTGTTGTCGA+CGG + chr1_1:76588085-76588104 Msa0044940:CDS 50.0%
TTGTTGTCGACGGACGATGA+AGG + chr1_1:76588095-76588114 Msa0044940:CDS 50.0%
AGCTGATGACATGGCAGCTA+AGG + chr1_1:76588127-76588146 Msa0044940:CDS 50.0%
CTTCCGGTTGTGTGAGAAAG+AGG + chr1_1:76588306-76588325 Msa0044940:CDS 50.0%
TGAGAAAGAGGCAAAGGCCT+AGG + chr1_1:76588318-76588337 Msa0044940:CDS 50.0%
TGAAGCTGAACAAGAGGAGG+AGG + chr1_1:76588454-76588473 Msa0044940:CDS 50.0%
GTCAGAGAAATGACAAGGGC+AGG + chr1_1:76588895-76588914 Msa0044940:CDS 50.0%
GAAAGAGGAGGAAGTTGCTG+AGG + chr1_1:76589304-76589323 Msa0044940:CDS 50.0%
ACTTGGAGAGCTCGAACTCA+TGG - chr1_1:76589508-76589527 None:intergenic 50.0%
! GTTGCTTTGCCCATGCTTCA+TGG + chr1_1:76589689-76589708 Msa0044940:intron 50.0%
!!! GCTTTTGGGACGAACATTGC+AGG + chr1_1:76589834-76589853 Msa0044940:intron 50.0%
CTTCGTTGTGGGAAGCTTCT+AGG + chr1_1:76590094-76590113 Msa0044940:CDS 50.0%
GGCCGTGATTATCTTCATGG+TGG + chr1_1:76590154-76590173 Msa0044940:CDS 50.0%
CCACTCACAAATCTCAGGCT+GGG - chr1_1:76590221-76590240 None:intergenic 50.0%
ACCACTCACAAATCTCAGGC+TGG - chr1_1:76590222-76590241 None:intergenic 50.0%
GCCGATGATGATTGTGGTCA+TGG + chr1_1:76590292-76590311 Msa0044940:CDS 50.0%
! TCAATGGCACTGGAGCAAAG+GGG + chr1_1:76590573-76590592 Msa0044940:CDS 50.0%
AATGCACGCCACATGACAAG+CGG - chr1_1:76590652-76590671 None:intergenic 50.0%
ACACAAATGGTCGCCCAGAT+TGG + chr1_1:76591802-76591821 Msa0044940:CDS 50.0%
!! GTCGCCCAGATTGGCTTAAT+TGG + chr1_1:76591811-76591830 Msa0044940:CDS 50.0%
AGCACCTTGAGCAAGACAAG+AGG + chr1_1:76592593-76592612 Msa0044940:CDS 50.0%
GCACCTTGAGCAAGACAAGA+GGG + chr1_1:76592594-76592613 Msa0044940:CDS 50.0%
CAAGACAAGAGGGAGCTACA+TGG + chr1_1:76592604-76592623 Msa0044940:CDS 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr1_1:76592885-76592904 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr1_1:76592891-76592910 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr1_1:76592888-76592907 Msa0044940:intron 50.0%
CAGTTTGTGCATGTTGTGGG+AGG - chr1_1:76593460-76593479 None:intergenic 50.0%
GAGAACCTGAGTTCGATTCC+TGG + chr1_1:76593542-76593561 Msa0044940:intron 50.0%
GTTAACCCTCAGGTTCCTAG+GGG - chr1_1:76593634-76593653 None:intergenic 50.0%
GTGTTAACCCTCAGGTTCCT+AGG - chr1_1:76593636-76593655 None:intergenic 50.0%
GACATACCACTAGTCGACGT+GGG - chr1_1:76593757-76593776 None:intergenic 50.0%
AGACATACCACTAGTCGACG+TGG - chr1_1:76593758-76593777 None:intergenic 50.0%
!! CGGTTTTGTAGGGTCGAGTT+AGG + chr1_1:76593820-76593839 Msa0044940:intron 50.0%
AGAGCGTGGACAAATGGAAG+TGG - chr1_1:76593916-76593935 None:intergenic 50.0%
! GTGTTTTTCCCTGAGCGTGA+GGG + chr1_1:76594008-76594027 Msa0044940:intron 50.0%
! TCCCACATCGACTAGAGATC+TGG + chr1_1:76594044-76594063 Msa0044940:intron 50.0%
GCCAGATCTCTAGTCGATGT+GGG - chr1_1:76594048-76594067 None:intergenic 50.0%
! CTCTCATAGTTCTGTTGCCC+TGG - chr1_1:76594358-76594377 None:intergenic 50.0%
! CCCCCACCCAACTTACATTT+TGG - chr1_1:76594456-76594475 None:intergenic 50.0%
GGCTCGATTCCTACAAGCAA+TGG - chr1_1:76595036-76595055 None:intergenic 50.0%
TGCTTGTAGGAATCGAGCCT+TGG + chr1_1:76595037-76595056 Msa0044940:CDS 50.0%
!! TCTGACTTGGTGAGGACAAC+CGG - chr1_1:76595103-76595122 None:intergenic 50.0%
TGAGTGCTTCCGTTTGACTG+AGG + chr1_1:76595575-76595594 Msa0044940:CDS 50.0%
GATAAACCACAGGTCCACCA+AGG + chr1_1:76595614-76595633 Msa0044940:CDS 50.0%
TGGTTGTAGGCATGGCAATG+GGG + chr1_1:76596087-76596106 Msa0044940:intron 50.0%
TGAGAATCGAGTATGGGGAC+GGG - chr1_1:76596138-76596157 None:intergenic 50.0%
TTGGGTATGGGTAGGGTAAC+GGG - chr1_1:76596169-76596188 None:intergenic 50.0%
GTTGGGTATGGGTAGGGTAA+CGG - chr1_1:76596170-76596189 None:intergenic 50.0%
GTTACCCTACCCATACCCAA+CGG + chr1_1:76596169-76596188 Msa0044940:intron 50.0%
TTACCCTACCCATACCCAAC+GGG + chr1_1:76596170-76596189 Msa0044940:intron 50.0%
GTTCAATTTCCCATCCCCGT+TGG - chr1_1:76596188-76596207 None:intergenic 50.0%
! TTATGCATTCGGGACGGGTT+TGG + chr1_1:76596458-76596477 Msa0044940:intron 50.0%
! TATGCATTCGGGACGGGTTT+GGG + chr1_1:76596459-76596478 Msa0044940:intron 50.0%
TCAAAACACGGGTATGGGAC+GGG - chr1_1:76596519-76596538 None:intergenic 50.0%
CTGGGTTTGGGTATGGGTTT+GGG - chr1_1:76596554-76596573 None:intergenic 50.0%
ACTGGGTTTGGGTATGGGTT+TGG - chr1_1:76596555-76596574 None:intergenic 50.0%
!! CGGGTTTTTCCCGTTTTGAC+TGG - chr1_1:76596573-76596592 None:intergenic 50.0%
!! CAAATTGGGTTTGGTTCGGG+TGG + chr1_1:76596594-76596613 Msa0044940:intron 50.0%
!! GTGTTGGAGTCAGGTTTTGG+AGG + chr1_1:76596823-76596842 Msa0044940:intron 50.0%
!!! TGGAGTCAGGTTTTGGAGGA+TGG + chr1_1:76596827-76596846 Msa0044940:intron 50.0%
TTAAGCACTAGACCAGCGAC+TGG + chr1_1:76596939-76596958 Msa0044940:intron 50.0%
CCGTGTCAGCAGTTGCTTAT+TGG + chr1_1:76597044-76597063 Msa0044940:intron 50.0%
GGATTCATCTGGGTCCGGAA+CGG - chr1_1:76587859-76587878 None:intergenic 55.0%
ACCTACTGCCAATGTTGGCG+CGG + chr1_1:76587908-76587927 Msa0044940:CDS 55.0%
TGCCAATGTTGGCGCGGAAA+CGG + chr1_1:76587914-76587933 Msa0044940:CDS 55.0%
TACCGTTTCCGCGCCAACAT+TGG - chr1_1:76587919-76587938 None:intergenic 55.0%
GCGGAAACGGTACCGTTGAA+GGG + chr1_1:76587927-76587946 Msa0044940:CDS 55.0%
! ACCGTTGAAGGGTGATGACG+TGG + chr1_1:76587938-76587957 Msa0044940:CDS 55.0%
GCCACGTCATCACCCTTCAA+CGG - chr1_1:76587942-76587961 None:intergenic 55.0%
! CGATGAAGGTGATGACGTGG+TGG + chr1_1:76588004-76588023 Msa0044940:CDS 55.0%
GGATGTTGGCGCAAAAACGG+TGG + chr1_1:76588070-76588089 Msa0044940:CDS 55.0%
!! GAATTGGGAAGGTGCTGACG+TGG + chr1_1:76588268-76588287 Msa0044940:CDS 55.0%
!! GAAGGTGCTGACGTGGAAGA+AGG + chr1_1:76588275-76588294 Msa0044940:CDS 55.0%
! GTGCTGACGTGGAAGAAGGA+GGG + chr1_1:76588279-76588298 Msa0044940:CDS 55.0%
CGTTGTGGGAAGCTTCTAGG+TGG + chr1_1:76590097-76590116 Msa0044940:CDS 55.0%
CCCAGCCTGAGATTTGTGAG+TGG + chr1_1:76590218-76590237 Msa0044940:CDS 55.0%
GTGAGTGGTCAAGATTCGGG+TGG + chr1_1:76590233-76590252 Msa0044940:CDS 55.0%
GGGTGGCATGCAGATAGTGA+TGG + chr1_1:76590250-76590269 Msa0044940:CDS 55.0%
CTTCTTGCCCTTGCATCCTC+TGG + chr1_1:76591386-76591405 Msa0044940:intron 55.0%
TTTGCTCAGGAGCTTGGACG+TGG + chr1_1:76592035-76592054 Msa0044940:CDS 55.0%
GCTCCCTCTTGTCTTGCTCA+AGG - chr1_1:76592600-76592619 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr1_1:76592877-76592896 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr1_1:76592876-76592895 Msa0044940:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr1_1:76592877-76592896 Msa0044940:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr1_1:76592883-76592902 Msa0044940:intron 55.0%
!! ATTTCGAGGTGCTGGGTTGG+AGG - chr1_1:76593095-76593114 None:intergenic 55.0%
TGTGCATGTTGTGGGAGGGA+GGG - chr1_1:76593455-76593474 None:intergenic 55.0%
TTGTGCATGTTGTGGGAGGG+AGG - chr1_1:76593456-76593475 None:intergenic 55.0%
ACCTGAGTTCGATTCCTGGG+TGG + chr1_1:76593546-76593565 Msa0044940:intron 55.0%
TCCACCCAGGAATCGAACTC+AGG - chr1_1:76593550-76593569 None:intergenic 55.0%
GGAAGGGCCCCCTACTAATA+TGG - chr1_1:76593613-76593632 None:intergenic 55.0%
! AGGACCAGGCATCTGAAGCA+TGG - chr1_1:76593709-76593728 None:intergenic 55.0%
ATGCCTGGTCCTCAGCATGA+TGG + chr1_1:76593717-76593736 Msa0044940:intron 55.0%
TGCCTGGTCCTCAGCATGAT+GGG + chr1_1:76593718-76593737 Msa0044940:intron 55.0%
CAACCAACCCCATCATGCTG+AGG - chr1_1:76593729-76593748 None:intergenic 55.0%
! GGTGTTTTTCCCTGAGCGTG+AGG + chr1_1:76594007-76594026 Msa0044940:intron 55.0%
AACACTCTCCCTCACGCTCA+GGG - chr1_1:76594019-76594038 None:intergenic 55.0%
TAACACTCTCCCTCACGCTC+AGG - chr1_1:76594020-76594039 None:intergenic 55.0%
GGCCAGATCTCTAGTCGATG+TGG - chr1_1:76594049-76594068 None:intergenic 55.0%
! TCGTAGTTCTGTTGCCCTGG+AGG - chr1_1:76594250-76594269 None:intergenic 55.0%
! CTCTCGTAGTTCTGTTGCCC+TGG - chr1_1:76594253-76594272 None:intergenic 55.0%
ACAGACCTCCAACCTGTCCT+TGG - chr1_1:76595634-76595653 None:intergenic 55.0%
TTGTAGGCATGGCAATGGGG+CGG + chr1_1:76596090-76596109 Msa0044940:intron 55.0%
GAGAATCGAGTATGGGGACG+GGG - chr1_1:76596137-76596156 None:intergenic 55.0%
TACCCTACCCATACCCAACG+GGG + chr1_1:76596171-76596190 Msa0044940:intron 55.0%
ATCCCCGTTGGGTATGGGTA+GGG - chr1_1:76596176-76596195 None:intergenic 55.0%
TACCCATACCCAACGGGGAT+GGG + chr1_1:76596176-76596195 Msa0044940:intron 55.0%
TTCCCATCCCCGTTGGGTAT+GGG - chr1_1:76596181-76596200 None:intergenic 55.0%
TTTCCCATCCCCGTTGGGTA+TGG - chr1_1:76596182-76596201 None:intergenic 55.0%
ATACTCGAACCCGTTGGGGA+CGG - chr1_1:76596217-76596236 None:intergenic 55.0%
ATTCAATGCGGGACGGGGAT+GGG - chr1_1:76596246-76596265 None:intergenic 55.0%
TATTCAATGCGGGACGGGGA+TGG - chr1_1:76596247-76596266 None:intergenic 55.0%
! ATTCGGGACGGGTTTGGGTA+TGG + chr1_1:76596464-76596483 Msa0044940:intron 55.0%
! TTCGGGACGGGTTTGGGTAT+GGG + chr1_1:76596465-76596484 Msa0044940:intron 55.0%
! GACGGGTTTGGGTATGGGTT+CGG + chr1_1:76596470-76596489 Msa0044940:intron 55.0%
ACGGGTTTGGGTATGGGTTC+GGG + chr1_1:76596471-76596490 Msa0044940:intron 55.0%
TTTGGGTATGGGTTCGGGGT+GGG + chr1_1:76596476-76596495 Msa0044940:intron 55.0%
!! GGGACGGGTAACGGGTATAT+AGG - chr1_1:76596504-76596523 None:intergenic 55.0%
!! TTGGTTCGGGTGGGTAACCA+CGG + chr1_1:76596604-76596623 Msa0044940:intron 55.0%
GGCAACAAAACCCATACCCG+TGG - chr1_1:76596624-76596643 None:intergenic 55.0%
TCCGCGCCAACATTGGCAGT+AGG - chr1_1:76587912-76587931 None:intergenic 60.0%
CGCGGAAACGGTACCGTTGA+AGG + chr1_1:76587926-76587945 Msa0044940:CDS 60.0%
!! GGTGCTGACGTGGAAGAAGG+AGG + chr1_1:76588278-76588297 Msa0044940:CDS 60.0%
GAGGCATGTCCAGTGTGCTG+TGG + chr1_1:76589323-76589342 Msa0044940:CDS 60.0%
TCAGGCTGGGCAGCAGAATG+AGG - chr1_1:76590208-76590227 None:intergenic 60.0%
GCTGGGAACCGCTTGTCATG+TGG + chr1_1:76590641-76590660 Msa0044940:CDS 60.0%
CCCTCAGGTTCCTAGGGGAA+GGG - chr1_1:76593629-76593648 None:intergenic 60.0%
CCCTTCCCCTAGGAACCTGA+GGG + chr1_1:76593626-76593645 Msa0044940:intron 60.0%
ACCCTCAGGTTCCTAGGGGA+AGG - chr1_1:76593630-76593649 None:intergenic 60.0%
GCCTGGTCCTCAGCATGATG+GGG + chr1_1:76593719-76593738 Msa0044940:intron 60.0%
ACCCCATCATGCTGAGGACC+AGG - chr1_1:76593723-76593742 None:intergenic 60.0%
! GGTCCTCAGCATGATGGGGT+TGG + chr1_1:76593723-76593742 Msa0044940:intron 60.0%
! GAGAGTCCCACGTCGACTAG+TGG + chr1_1:76593748-76593767 Msa0044940:intron 60.0%
TGCCCTGGAGGTTCCCAGAA+GGG - chr1_1:76594238-76594257 None:intergenic 60.0%
TTGCCCTGGAGGTTCCCAGA+AGG - chr1_1:76594239-76594258 None:intergenic 60.0%
! ACTTGGTGAGGACAACCGGC+AGG - chr1_1:76595099-76595118 None:intergenic 60.0%
ACCACAGGTCCACCAAGGAC+AGG + chr1_1:76595619-76595638 Msa0044940:CDS 60.0%
! ACCTGTCCTTGGTGGACCTG+TGG - chr1_1:76595623-76595642 None:intergenic 60.0%
CAGGTCCACCAAGGACAGGT+TGG + chr1_1:76595623-76595642 Msa0044940:CDS 60.0%
! GTCCACCAAGGACAGGTTGG+AGG + chr1_1:76595626-76595645 Msa0044940:CDS 60.0%
GACCTCCAACCTGTCCTTGG+TGG - chr1_1:76595631-76595650 None:intergenic 60.0%
TGTAGGCATGGCAATGGGGC+GGG + chr1_1:76596091-76596110 Msa0044940:intron 60.0%
CATCCCCGTTGGGTATGGGT+AGG - chr1_1:76596177-76596196 None:intergenic 60.0%
CTACCCATACCCAACGGGGA+TGG + chr1_1:76596175-76596194 Msa0044940:intron 60.0%
TACTCGAACCCGTTGGGGAC+GGG - chr1_1:76596216-76596235 None:intergenic 60.0%
GGGGATACTCGAACCCGTTG+GGG - chr1_1:76596221-76596240 None:intergenic 60.0%
CGGGGATACTCGAACCCGTT+GGG - chr1_1:76596222-76596241 None:intergenic 60.0%
TTCAATGCGGGACGGGGATG+GGG - chr1_1:76596245-76596264 None:intergenic 60.0%
CGGGTTTGGGTATGGGTTCG+GGG + chr1_1:76596472-76596491 Msa0044940:intron 60.0%
GTTTGGGTATGGGTTCGGGG+TGG + chr1_1:76596475-76596494 Msa0044940:intron 60.0%
ACGGGTATGGGACGGGTAAC+GGG - chr1_1:76596512-76596531 None:intergenic 60.0%
CACGGGTATGGGACGGGTAA+CGG - chr1_1:76596513-76596532 None:intergenic 60.0%
! TGGTTCGGGTGGGTAACCAC+GGG + chr1_1:76596605-76596624 Msa0044940:intron 60.0%
GGGTGGGTAACCACGGGTAT+GGG + chr1_1:76596611-76596630 Msa0044940:intron 60.0%
TAGTAGGGGGCCCTTCCCCT+AGG + chr1_1:76593616-76593635 Msa0044940:intron 65.0%
GCCCTTCCCCTAGGAACCTG+AGG + chr1_1:76593625-76593644 Msa0044940:intron 65.0%
! AGCCCCTTCTGGGAACCTCC+AGG + chr1_1:76594232-76594251 Msa0044940:intron 65.0%
! GCCCCTTCTGGGAACCTCCA+GGG + chr1_1:76594233-76594252 Msa0044940:intron 65.0%
GCCCTGGAGGTTCCCAGAAG+GGG - chr1_1:76594237-76594256 None:intergenic 65.0%
GTAGGCATGGCAATGGGGCG+GGG + chr1_1:76596092-76596111 Msa0044940:intron 65.0%
GAACCCCATCCCGTCCCCAA+CGG + chr1_1:76596204-76596223 Msa0044940:intron 65.0%
AACCCCATCCCGTCCCCAAC+GGG + chr1_1:76596205-76596224 Msa0044940:intron 65.0%
AACCCGTTGGGGACGGGATG+GGG - chr1_1:76596210-76596229 None:intergenic 65.0%
GAACCCGTTGGGGACGGGAT+GGG - chr1_1:76596211-76596230 None:intergenic 65.0%
GCGGGGATACTCGAACCCGT+TGG - chr1_1:76596223-76596242 None:intergenic 65.0%
CGGGTGGGTAACCACGGGTA+TGG + chr1_1:76596610-76596629 Msa0044940:intron 65.0%
GCATGGCAATGGGGCGGGGT+GGG + chr1_1:76596096-76596115 Msa0044940:intron 70.0%
CATGGCAATGGGGCGGGGTG+GGG + chr1_1:76596097-76596116 Msa0044940:intron 70.0%
CGAACCCGTTGGGGACGGGA+TGG - chr1_1:76596212-76596231 None:intergenic 70.0%
AATGCGGGACGGGGATGGGG+CGG - chr1_1:76596242-76596261 None:intergenic 70.0%
GGCATGGCAATGGGGCGGGG+TGG + chr1_1:76596095-76596114 Msa0044940:intron 75.0%
GCAATGGGGCGGGGTGGGGA+CGG + chr1_1:76596101-76596120 Msa0044940:intron 75.0%
CAATGGGGCGGGGTGGGGAC+GGG + chr1_1:76596102-76596121 Msa0044940:intron 75.0%
ATGCGGGACGGGGATGGGGC+GGG - chr1_1:76596241-76596260 None:intergenic 75.0%
! TGCGGGACGGGGATGGGGCG+GGG - chr1_1:76596240-76596259 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 76587739 76597752 76587739 ID=Msa0044940;Name=Msa0044940
chr1_1 mRNA 76587739 76597752 76587739 ID=Msa0044940-mRNA-1;Parent=Msa0044940;Name=Msa0044940-mRNA-1;_AED=0.26;_eAED=0.27;_QI=56|0.81|0.83|1|1|1|12|319|1063
chr1_1 exon 76587739 76588733 76587739 ID=Msa0044940-mRNA-1:exon:26085;Parent=Msa0044940-mRNA-1
chr1_1 exon 76588861 76588976 76588861 ID=Msa0044940-mRNA-1:exon:26086;Parent=Msa0044940-mRNA-1
chr1_1 exon 76589292 76589391 76589292 ID=Msa0044940-mRNA-1:exon:26087;Parent=Msa0044940-mRNA-1
chr1_1 exon 76589473 76589611 76589473 ID=Msa0044940-mRNA-1:exon:26088;Parent=Msa0044940-mRNA-1
chr1_1 exon 76589856 76589919 76589856 ID=Msa0044940-mRNA-1:exon:26089;Parent=Msa0044940-mRNA-1
chr1_1 exon 76590009 76590744 76590009 ID=Msa0044940-mRNA-1:exon:26090;Parent=Msa0044940-mRNA-1
chr1_1 exon 76591768 76592097 76591768 ID=Msa0044940-mRNA-1:exon:26091;Parent=Msa0044940-mRNA-1
chr1_1 exon 76592517 76592852 76592517 ID=Msa0044940-mRNA-1:exon:26092;Parent=Msa0044940-mRNA-1
chr1_1 exon 76595030 76595131 76595030 ID=Msa0044940-mRNA-1:exon:26093;Parent=Msa0044940-mRNA-1
chr1_1 exon 76595528 76595647 76595528 ID=Msa0044940-mRNA-1:exon:26094;Parent=Msa0044940-mRNA-1
chr1_1 exon 76597114 76597257 76597114 ID=Msa0044940-mRNA-1:exon:26095;Parent=Msa0044940-mRNA-1
chr1_1 exon 76597368 76597752 76597368 ID=Msa0044940-mRNA-1:exon:26096;Parent=Msa0044940-mRNA-1
chr1_1 five_prime_UTR 76587739 76587794 76587739 ID=Msa0044940-mRNA-1:five_prime_utr;Parent=Msa0044940-mRNA-1
chr1_1 CDS 76587795 76588733 76587795 ID=Msa0044940-mRNA-1:cds;Parent=Msa0044940-mRNA-1
chr1_1 CDS 76588861 76588976 76588861 ID=Msa0044940-mRNA-1:cds;Parent=Msa0044940-mRNA-1
chr1_1 CDS 76589292 76589391 76589292 ID=Msa0044940-mRNA-1:cds;Parent=Msa0044940-mRNA-1
chr1_1 CDS 76589473 76589611 76589473 ID=Msa0044940-mRNA-1:cds;Parent=Msa0044940-mRNA-1
chr1_1 CDS 76589856 76589919 76589856 ID=Msa0044940-mRNA-1:cds;Parent=Msa0044940-mRNA-1
chr1_1 CDS 76590009 76590744 76590009 ID=Msa0044940-mRNA-1:cds;Parent=Msa0044940-mRNA-1
chr1_1 CDS 76591768 76592097 76591768 ID=Msa0044940-mRNA-1:cds;Parent=Msa0044940-mRNA-1
chr1_1 CDS 76592517 76592852 76592517 ID=Msa0044940-mRNA-1:cds;Parent=Msa0044940-mRNA-1
chr1_1 CDS 76595030 76595131 76595030 ID=Msa0044940-mRNA-1:cds;Parent=Msa0044940-mRNA-1
chr1_1 CDS 76595528 76595647 76595528 ID=Msa0044940-mRNA-1:cds;Parent=Msa0044940-mRNA-1
chr1_1 CDS 76597114 76597257 76597114 ID=Msa0044940-mRNA-1:cds;Parent=Msa0044940-mRNA-1
chr1_1 CDS 76597368 76597433 76597368 ID=Msa0044940-mRNA-1:cds;Parent=Msa0044940-mRNA-1
chr1_1 three_prime_UTR 76597434 76597752 76597434 ID=Msa0044940-mRNA-1:three_prime_utr;Parent=Msa0044940-mRNA-1
Gene Sequence

>Msa0044940

ATGGCGGAGGAAGAGAACAACCACACAGTCACATATACAGTGAAAATCAAAGTCACACTCACCGTTCCGGACCCAGATGAATCCATTCCTGATCATGATCGTCGAGAAACACAACCTACTGCCAATGTTGGCGCGGAAACGGTACCGTTGAAGGGTGATGACGTGGCACAAGCTATCGGTGTTAGAGCTGAAACGGCGTTGTTGAACAACGATGAAGGTGATGACGTGGTGGAAGCAGCTGAAGAATCTATTCCTGATCGAGAAAAACAAGATATGGATGTTGGCGCAAAAACGGTGGTGTTGTTGTCGACGGACGATGAAGGTTCCGTTGAAGCTGATGACATGGCAGCTAAGGATTCTGATGAAAACAATGCTGAACAAGAGTGTGAGGAAAAAAAAGTCATTAAAGAGAAGAAGAGAGCTGGTAGAAAAAGAAAAAAGACAGTTTATAGTTCGGAAGAGGGTGAGGAAAAGAATTGGGAAGGTGCTGACGTGGAAGAAGGAGGGTTTTCTTCCGGTTGTGTGAGAAAGAGGCAAAGGCCTAGGAAGATTAAATCGTTGAAGGAAGATTACGTGTCAGATTTGGAGGAGGATATGAAGAAAAAGTGGAAACGTGGTAGGAAGAAGAAGGTCATAATTGAGGTTTCTGATGAGAATGATGAAGCTGAACAAGAGGAGGAGGATGTGAAGACAGAGCAGAAGAAACCTGGTAGAAAAAGGAAAGTAGGTTATGGTTCTGAAGAAAATGACGAAGATGAACAAGAGGGGGAAAATGGTAAAAATTTTAAGATTGTTGAGAATGAATTGATCAGTGAAAAGAATTTGGAGAGTGATGTTTTATCAGATGATAATAAAGGTTATTCTTTAAGGACTGATAGAAAAGTGAAAGTTAAAAGCATTGAACAGCCGAAGCAAAAAATAAACAAACGGAATCCAAAGTGGATTGAAGAGGAGTCCTTAATGTGCCATCAATGTCAGAGAAATGACAAGGGCAGGGTTGTGAGATGCACAAAATGCAAACGGAAAAGATTTTGCATACCTTGTTTAAACAATTGGTATCCTCACTTGAAAGAGGAGGAAGTTGCTGAGGCATGTCCAGTGTGCTGTGGTAATTGCAATTGCAAAGCATGCTTGCGATCATGTGCACTTATCAAAGAAATTAAAATGAAGACAGAAACCAACAACAACCATGAGTTCGAGCTCTCCAAGTATATGCTGAAAGAACTTCTTCCATATTTAAGACGATTGGATGAAGAACAAATGGTCGAGAAGGAGATAGAAGCAAAGAGAAAAGGGCTCTCACATTCTAAGCTAAAAGTAAAAGCCGCAGATTACCCTAAAAATAAGCGTGTGTACTGTGACAACTGCAAAACGTCAATATTTGACTACCACAGAAGCTGTACAAAATGCTCTTTTAACATTTGTCTTCTTTGTTGTTGTGAGCTTCGTTGTGGGAAGCTTCTAGGTGGTACAGATCCAATTGAGTTTGAGTTTATCTTCCAAGGCCGTGATTATCTTCATGGTGGAAAAGAAGAGAGGGTAAAAAAAAATAAACCTCATTCTGCTGCCCAGCCTGAGATTTGTGAGTGGTCAAGATTCGGGTGGCATGCAGATAGTGATGGTAGCATTCCCTGTCCAAAAGCCGATGATGATTGTGGTCATGGTTTCCTCGAACTGAGAAGCATACTTCCACCAAATTGCATCTCTGAGTTAGTATGTAAAGCGAAAGAACTCGAAGAAACAATTAGGCTTCAAGATGCAGAGGAGACATTTGATAGTATGTGTTCTTGTTTGAAGCCTGTTAGGAATGCAACTGATATACACAATAACACAAGGAAGGCAGCTTCCCGTGAAGATTCCAGTGACAACTTCTTGTATTCCCCCAGAGCTTTAAATTTACGTCATGAGGATTTAAGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTAATTATCAGCAATGTACTTGAATGTACAACTGGTTTAAGCTGGGAACCGCTTGTCATGTGGCGTGCATTCCGTCAGATAAGAAATACCAAGCACAAAACACTTTTGGATGTGGAGGCAATTGATTGCTTAGATTGGTGTGAGGAAAATATTAATGTGCACCAATTCTTTACTGGGTACACAAATGGTCGCCCAGATTGGCTTAATTGGCCTCAGGTTTTGAAATTGAAAGATTGGCCTCCTTCTAATTTATTTAGGGAAAGTTTGCCTCGTCATTGTGCTGAGTTCATATCTTCCTTGCCGTATAAAGAATATACAGATCCTTTCAAAGGCATTCTTAACCTTGCTGTGAAGTTGCCTGAAAATGTTCTAAAGCCAGACATGGGCCCAAAAACATATATTGCTTATGGATTTGCTCAGGAGCTTGGACGTGGTGATTCTGTGACTAAGCTCCACTGTAATATGTCTGATGCGGTAAATGTGTTGACTCATATTGCTGAAGTGAAATTGAAATCTGAGGGCATTGCTGCCATTAAGAAACTGACCCAAAAGCACCTTGAGCAAGACAAGAGGGAGCTACATGGTGATAATCGAGATGGAGAGACCAACGTTGACATGTTTGATAATTCATCTTCTTCCATAAATGCTTCAGACGAGCAAAATAGTGTTCGAGTTTTGGAAAATAGGGGTGATTCTTTAGATGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCTGAATTGGAGGAATATTTAAAGAAGCATTTCAGAGAGTTTAGGCATGCCCATTGCTCTCCTTTAAAGCAGTCACCATTGCTTGTAGGAATCGAGCCTTGGACTTTTATTCAGAAGCTAGGAGATGCTGTTTTCATTCCTGCCGGTTGTCCTCACCAAGTCAGAAATCTAAAGTCATGCATCAAGGTTGGACTTGATTTTGTCTCACCTGAAAATGTTGGTGAGTGCTTCCGTTTGACTGAGGAATTCCGTAAGCTTCCGATAAACCACAGGTCCACCAAGGACAGGTTGGAGGTGAAGAAAATGACTATATATGCTATGCTTGATGTGGTTAACAAATTGGAGAAAACAAGGTTACTGATTGCAAACTTCCTCTCCCTTGGTTATGAATTTGATATACTGTGTTTCTTGATATACTACTTTGCTCTCAAAGGCATGGTTTGGAGAAACCAAGGATCCAGTGTAAATATATGTGAGAAATCCAATGGGAATGTACATTTTTAA
Protein sequence

>Msa0044940

MAEEENNHTVTYTVKIKVTLTVPDPDESIPDHDRRETQPTANVGAETVPLKGDDVAQAIGVRAETALLNNDEGDDVVEAAEESIPDREKQDMDVGAKTVVLLSTDDEGSVEADDMAAKDSDENNAEQECEEKKVIKEKKRAGRKRKKTVYSSEEGEEKNWEGADVEEGGFSSGCVRKRQRPRKIKSLKEDYVSDLEEDMKKKWKRGRKKKVIIEVSDENDEAEQEEEDVKTEQKKPGRKRKVGYGSEENDEDEQEGENGKNFKIVENELISEKNLESDVLSDDNKGYSLRTDRKVKVKSIEQPKQKINKRNPKWIEEESLMCHQCQRNDKGRVVRCTKCKRKRFCIPCLNNWYPHLKEEEVAEACPVCCGNCNCKACLRSCALIKEIKMKTETNNNHEFELSKYMLKELLPYLRRLDEEQMVEKEIEAKRKGLSHSKLKVKAADYPKNKRVYCDNCKTSIFDYHRSCTKCSFNICLLCCCELRCGKLLGGTDPIEFEFIFQGRDYLHGGKEERVKKNKPHSAAQPEICEWSRFGWHADSDGSIPCPKADDDCGHGFLELRSILPPNCISELVCKAKELEETIRLQDAEETFDSMCSCLKPVRNATDIHNNTRKAASREDSSDNFLYSPRALNLRHEDLRHFQWHWSKGEPVIISNVLECTTGLSWEPLVMWRAFRQIRNTKHKTLLDVEAIDCLDWCEENINVHQFFTGYTNGRPDWLNWPQVLKLKDWPPSNLFRESLPRHCAEFISSLPYKEYTDPFKGILNLAVKLPENVLKPDMGPKTYIAYGFAQELGRGDSVTKLHCNMSDAVNVLTHIAEVKLKSEGIAAIKKLTQKHLEQDKRELHGDNRDGETNVDMFDNSSSSINASDEQNSVRVLENRGDSLDGALWDIFRREDVPELEEYLKKHFREFRHAHCSPLKQSPLLVGIEPWTFIQKLGDAVFIPAGCPHQVRNLKSCIKVGLDFVSPENVGECFRLTEEFRKLPINHRSTKDRLEVKKMTIYAMLDVVNKLEKTRLLIANFLSLGYEFDILCFLIYYFALKGMVWRNQGSSVNICEKSNGNVHF*