AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0230690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0230690 MtrunA17_Chr1g0211691 88.013 951 88 5 1 926 1 950 0.0 1592
Msa0230690 MtrunA17_Chr1g0211711 71.040 1067 193 14 42 1014 7 1051 0.0 1457
Msa0230690 MtrunA17_Chr1g0183311 69.059 850 184 7 234 1014 43 882 0.0 1145
Msa0230690 MtrunA17_Chr5g0426961 67.750 769 205 8 270 1013 84 834 0.0 1030
Msa0230690 MtrunA17_Chr1g0211661 71.535 671 159 7 304 954 207 865 0.0 974
Msa0230690 MtrunA17_Chr1g0211661 80.833 120 23 0 1 120 1 120 5.65e-49 188
Msa0230690 MtrunA17_Chr5g0420361 63.314 676 204 11 385 1023 138 806 0.0 842
Msa0230690 MtrunA17_Chr6g0472441 61.898 664 179 14 385 1007 80 710 0.0 792
Msa0230690 MtrunA17_Chr5g0448301 60.512 547 180 7 379 920 93 608 0.0 627
Msa0230690 MtrunA17_Chr5g0448301 38.857 175 58 8 26 189 7 143 6.66e-12 69.7
Msa0230690 MtrunA17_Chr7g0275771 40.741 945 413 25 184 1019 24 930 0.0 618
Msa0230690 MtrunA17_Chr4g0075261 43.158 760 321 17 311 1011 157 864 0.0 573
Msa0230690 MtrunA17_Chr2g0289121 45.035 715 317 13 322 1011 156 819 0.0 560
Msa0230690 MtrunA17_Chr1g0192011 35.040 742 390 16 322 1015 267 964 9.39e-137 437
Msa0230690 MtrunA17_Chr1g0147021 44.673 535 259 10 316 845 864 1366 6.29e-131 435
Msa0230690 MtrunA17_Chr1g0147021 55.975 159 48 2 886 1022 1551 1709 4.88e-44 174
Msa0230690 MtrunA17_Chr2g0289031 49.877 405 162 5 628 1011 9 393 6.22e-120 373
Msa0230690 MtrunA17_Chr2g0281051 32.943 768 401 18 322 1003 207 946 4.20e-117 383
Msa0230690 MtrunA17_Chr8g0364421 50.000 256 96 4 432 686 5 229 5.38e-70 233
Msa0230690 MtrunA17_Chr7g0231061 59.574 188 69 2 681 868 8 188 2.56e-63 213
Msa0230690 MtrunA17_Chr4g0048531 41.806 299 159 6 543 835 727 1016 2.12e-62 232
Msa0230690 MtrunA17_Chr4g0048531 45.890 146 61 2 885 1012 1132 1277 8.87e-33 137
Msa0230690 MtrunA17_Chr4g0048531 36.585 164 97 3 322 479 260 422 2.25e-26 117
Msa0230690 MtrunA17_Chr8g0361381 55.080 187 80 2 623 809 26 208 5.08e-60 204
Msa0230690 MtrunA17_Chr6g0469821 70.748 147 36 2 1 147 1 140 4.13e-56 190
Msa0230690 MtrunA17_Chr8g0340381 65.476 168 39 3 722 889 36 184 2.34e-55 190
Msa0230690 MtrunA17_Chr1g0211701 96.667 90 3 0 926 1015 30 119 5.18e-54 185
Msa0230690 MtrunA17_Chr2g0289091 59.441 143 57 1 700 842 22 163 1.73e-47 176
Msa0230690 MtrunA17_Chr2g0289091 57.658 111 28 2 885 976 310 420 2.68e-31 128
Msa0230690 MtrunA17_Chr2g0289041 39.070 215 113 7 344 552 2 204 8.07e-39 143
Msa0230690 MtrunA17_Chr8g0364411 57.143 112 48 0 322 433 33 144 4.12e-36 134
Msa0230690 MtrunA17_Chr1g0211681 72.043 93 25 1 55 147 1 92 4.95e-33 122
Msa0230690 MtrunA17_Chr1g0211671 76.190 63 15 0 953 1015 15 77 1.15e-27 108
Msa0230690 MtrunA17_Chr3g0119761 66.234 77 26 0 795 871 55 131 4.83e-25 101
Msa0230690 MtrunA17_Chr8g0361391 48.624 109 38 2 864 954 29 137 3.25e-24 100
Msa0230690 MtrunA17_Chr2g0289101 37.879 132 67 6 454 579 8 130 6.89e-15 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0230690 AT1G11950.1 47.376 724 315 13 318 1015 189 872 0.0 635
Msa0230690 AT1G11950.3 47.376 724 315 13 318 1015 189 872 0.0 635
Msa0230690 AT1G62310.1 46.950 705 320 15 321 1000 208 883 0.0 620
Msa0230690 AT4G00990.1 41.397 773 347 16 322 1011 80 829 4.86e-180 546
Msa0230690 AT1G11950.2 45.942 653 287 14 318 944 189 801 1.74e-177 538
Msa0230690 AT3G07610.1 53.893 488 185 6 535 1003 417 883 3.44e-167 518
Msa0230690 AT3G07610.1 39.556 225 133 2 292 516 127 348 1.90e-46 181
Msa0230690 AT3G07610.3 51.282 507 191 7 535 1003 417 905 1.05e-158 496
Msa0230690 AT3G07610.3 39.556 225 133 2 292 516 127 348 1.86e-46 181
Msa0230690 AT4G00990.3 40.363 716 323 16 322 955 80 773 2.02e-154 477
Msa0230690 AT4G00990.2 40.533 713 320 16 322 952 80 770 3.29e-154 476
Msa0230690 AT1G09060.2 32.656 738 420 17 315 1015 197 894 3.37e-112 370
Msa0230690 AT1G09060.1 32.656 738 420 17 315 1015 197 894 3.37e-112 370
Msa0230690 AT1G09060.4 32.656 738 420 17 315 1015 211 908 6.00e-112 369
Msa0230690 AT1G09060.3 32.656 738 420 17 315 1015 211 908 6.00e-112 369
Msa0230690 AT3G07610.2 56.940 281 114 2 535 815 417 690 1.08e-96 323
Msa0230690 AT3G07610.2 39.556 225 133 2 292 516 127 348 2.63e-46 179
Msa0230690 AT4G21430.1 31.791 497 280 8 561 1010 427 911 2.18e-72 259
Msa0230690 AT4G21430.1 29.747 158 108 3 316 471 221 377 1.44e-12 72.4

Find 225 sgRNAs with CRISPR-Local

Find 629 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATAAAGGTTATTCTTTA+AGG 0.076090 2_2:-2886299 Msa0230690:CDS
GGCCTCCTTCTAATTTATTT+AGG 0.135585 2_2:-2883082 Msa0230690:CDS
TGTCTTGCTCAAGGTGCTTT+TGG 0.146606 2_2:+2882353 None:intergenic
TTGCTCGTCTGAAGCATTTA+TGG 0.202791 2_2:+2882261 None:intergenic
ATTGATCAGTGAAAAGAATT+TGG 0.212830 2_2:-2886343 Msa0230690:CDS
GCAAAATAGTGTTCGAGTTT+TGG 0.215510 2_2:-2882242 Msa0230690:CDS
TCATCCAATCGTCTTAAATA+TGG 0.224411 2_2:+2885393 None:intergenic
GTCGCCCAGATTGGCTTAAT+TGG 0.224414 2_2:-2883130 Msa0230690:CDS
TTTAAATATTCCTCCAATTC+AGG 0.228132 2_2:+2882160 None:intergenic
GCCTCCTTCTAATTTATTTA+GGG 0.243943 2_2:-2883081 Msa0230690:CDS
CTTCGTTGTGGGAAGCTTCT+AGG 0.247218 2_2:-2884847 Msa0230690:CDS
GCTTGATGTGGTTAACAAAT+TGG 0.261966 2_2:-2878362 Msa0230690:CDS
AATGTGCACCAATTCTTTAC+TGG 0.265399 2_2:-2883164 Msa0230690:CDS
CCACAATCATCATCGGCTTT+TGG 0.278197 2_2:+2884655 None:intergenic
CTGACATTGATGGCACATTA+AGG 0.293064 2_2:+2886064 None:intergenic
AGTACATTGCTGATAATTAC+AGG 0.293307 2_2:+2884343 None:intergenic
GGATCTGTATATTCTTTATA+CGG 0.299317 2_2:+2883017 None:intergenic
TACCAAGCACAAAACACTTT+TGG 0.300838 2_2:-2884254 Msa0230690:CDS
ATTCTTTAGATGGTGCTCTC+TGG 0.323154 2_2:-2882207 Msa0230690:CDS
GCATACCTTGTTTAAACAAT+TGG 0.324245 2_2:-2885986 Msa0230690:intron
AGAAGCATTTCAGAGAGTTT+AGG 0.334304 2_2:-2882138 Msa0230690:CDS
TGTCATTTCTCTGACATTGA+TGG 0.335478 2_2:+2886054 None:intergenic
GGAAGATTACGTGTCAGATT+TGG 0.338618 2_2:-2886583 Msa0230690:CDS
TTGGTGGACCTGTGGTTTAT+CGG 0.340425 2_2:+2879324 None:intergenic
CAAGGCCGTGATTATCTTCA+TGG 0.341964 2_2:-2884790 Msa0230690:CDS
AGAAGAAACCTGGTAGAAAA+AGG 0.348376 2_2:-2886449 Msa0230690:CDS
AATAGGGGTGATTCTTTAGA+TGG 0.356154 2_2:-2882217 Msa0230690:CDS
ATATCAGTTGCATTCCTAAC+AGG 0.357202 2_2:+2884493 None:intergenic
ACTAACTCAGAGATGCAATT+TGG 0.359225 2_2:+2884598 None:intergenic
GCAGTGTAGCATAGATAGTT+AGG 0.362275 2_2:-2887192 Msa0230690:five_prime_UTR
CTCGAACTCATGGTTGTTGT+TGG 0.375822 2_2:+2885446 None:intergenic
TTTGTGAGTGGTCAAGATTC+GGG 0.378563 2_2:-2884711 Msa0230690:CDS
TTGCAAACTTCCTCTCCCTT+TGG 0.380018 2_2:-2878321 Msa0230690:CDS
TGACAGTCACCATTGCTTGT+AGG 0.380366 2_2:-2879912 Msa0230690:intron
CTTTCCCTAAATAAATTAGA+AGG 0.387657 2_2:+2883077 None:intergenic
ATGACGTAAATTTAAAGCTC+TGG 0.387898 2_2:+2884408 None:intergenic
CGCGGAAACGGTACCGTTGA+AGG 0.390300 2_2:-2887015 Msa0230690:CDS
TGATCAGGAATGGATTCATC+TGG 0.392651 2_2:+2887074 None:intergenic
AAGAGGGTGAGGAAAAGAAT+TGG 0.395670 2_2:-2886689 Msa0230690:CDS
TGAGGCCAATTAAGCCAATC+TGG 0.400800 2_2:+2883125 None:intergenic
GTTCTTGTTTGAAGCCTGTT+AGG 0.405975 2_2:-2884507 Msa0230690:CDS
TCTGACTTGGTGAGGACAAC+CGG 0.410174 2_2:+2879836 None:intergenic
AAGATAAACTCAAACTCAAT+TGG 0.413084 2_2:+2884814 None:intergenic
TTCAATGGCACTGGAGCAAA+GGG 0.413215 2_2:-2884369 Msa0230690:CDS
CTTCCGGTTGTGTGAGAAAG+AGG 0.414317 2_2:-2886635 Msa0230690:CDS
TTCTTTAGATGGTGCTCTCT+GGG 0.419089 2_2:-2882206 Msa0230690:CDS
GAGAGAGGATGTACCTGAAT+TGG 0.421371 2_2:-2882173 Msa0230690:CDS
TATGGATTTGCTCAGGAGCT+TGG 0.422137 2_2:-2882912 Msa0230690:CDS
TTCTTTACTGGGTACACAAA+TGG 0.422160 2_2:-2883152 Msa0230690:CDS
AATGTACTTGAATGTACAAC+TGG 0.424187 2_2:-2884328 Msa0230690:CDS
ATTTGTGAGTGGTCAAGATT+CGG 0.429286 2_2:-2884712 Msa0230690:CDS
TCTTCCATATTTAAGACGAT+TGG 0.429788 2_2:-2885397 Msa0230690:CDS
TTGTGTACCCAGTAAAGAAT+TGG 0.434568 2_2:+2883156 None:intergenic
ACCTGCATTTGAAATTTCAA+TGG 0.434734 2_2:-2887165 Msa0230690:exon
AGAGGGTGAGGAAAAGAATT+GGG 0.444632 2_2:-2886688 Msa0230690:CDS
CAAAGTCACACTCACCGTTC+CGG 0.446960 2_2:-2887099 Msa0230690:CDS
AAGTTCTTTCAGCATATACT+TGG 0.448229 2_2:+2885419 None:intergenic
AATGTACAACTGGTTTAAGC+TGG 0.448278 2_2:-2884318 Msa0230690:CDS
GCCATTGAAATTTCAAATGC+AGG 0.448443 2_2:+2887164 None:intergenic
TGCCAATGTTGGCGCGGAAA+CGG 0.450167 2_2:-2887027 Msa0230690:CDS
AGCTGATGACATGGCAGCTA+AGG 0.454453 2_2:-2886814 Msa0230690:CDS
TTGCCTCTTTCTCACACAAC+CGG 0.456045 2_2:+2886632 None:intergenic
GAAGAAGAAGGTCATAATTG+AGG 0.456146 2_2:-2886526 Msa0230690:CDS
AAGAACTCGAAGAAACAATT+AGG 0.456155 2_2:-2884564 Msa0230690:CDS
CTGCTTTAAAGGAGAGCAAT+GGG 0.464779 2_2:+2882111 None:intergenic
TGAGAAAGAGGCAAAGGCCT+AGG 0.465093 2_2:-2886623 Msa0230690:CDS
AGATTGGCTTAATTGGCCTC+AGG 0.465478 2_2:-2883123 Msa0230690:CDS
GAGATAGAAGCAAAGAGAAA+AGG 0.470722 2_2:-2885351 Msa0230690:intron
CATGAAGATAATCACGGCCT+TGG 0.473194 2_2:+2884791 None:intergenic
TGCTTGTAGGAATCGAGCCT+TGG 0.475187 2_2:-2879899 Msa0230690:CDS
ACACAAATGGTCGCCCAGAT+TGG 0.475261 2_2:-2883139 Msa0230690:CDS
GACAGTTTATAGTTCGGAAG+AGG 0.480891 2_2:-2886706 Msa0230690:CDS
TGACGTAAATTTAAAGCTCT+GGG 0.482957 2_2:+2884409 None:intergenic
GTCAGAGAAATGACAAGGGC+AGG 0.483009 2_2:-2886046 Msa0230690:CDS
ACCACTCACAAATCTCAGGC+TGG 0.483334 2_2:+2884722 None:intergenic
TATTGCTTATGGATTTGCTC+AGG 0.486399 2_2:-2882919 Msa0230690:CDS
AGGCAATTGATTGCTTAGAT+TGG 0.486412 2_2:-2884225 Msa0230690:CDS
TGTGGTTTATCGGAAGCTTA+CGG 0.487799 2_2:+2879334 None:intergenic
GTTTCTCGACGATCATGATC+AGG 0.488002 2_2:+2887059 None:intergenic
ACGATTGGATGAAGAACAAA+TGG 0.491089 2_2:-2885382 Msa0230690:CDS
ATGTGCACCAATTCTTTACT+GGG 0.492244 2_2:-2883163 Msa0230690:CDS
AGCTTTAAATTTACGTCATG+AGG 0.498076 2_2:-2884404 Msa0230690:CDS
TAGGAAGATTAAATCGTTGA+AGG 0.499461 2_2:-2886604 Msa0230690:CDS
TTACCTTTAGATTTCTGACT+TGG 0.503046 2_2:+2879823 None:intergenic
GACCTCCAACCTGTCCTTGG+TGG 0.508939 2_2:+2879308 None:intergenic
TTCAACGATTTAATCTTCCT+AGG 0.509264 2_2:+2886606 None:intergenic
GCTTGGTATTTCTTATCTGA+CGG 0.510840 2_2:+2884269 None:intergenic
ACCTGTCCTTGGTGGACCTG+TGG 0.512572 2_2:+2879316 None:intergenic
CTTGACCACTCACAAATCTC+AGG 0.514084 2_2:+2884718 None:intergenic
ACAGACCTCCAACCTGTCCT+TGG 0.514908 2_2:+2879305 None:intergenic
TTTCAATGGCACTGGAGCAA+AGG 0.515097 2_2:-2884370 Msa0230690:CDS
AGATTACGTGTCAGATTTGG+AGG 0.516385 2_2:-2886580 Msa0230690:CDS
GTTGTTGTGAGCTTCGTTGT+GGG 0.519321 2_2:-2884858 Msa0230690:CDS
GCTCCCTCTTGTCTTGCTCA+AGG 0.519343 2_2:+2882344 None:intergenic
TCGACGATCATGATCAGGAA+TGG 0.519620 2_2:+2887064 None:intergenic
TACCGTTTCCGCGCCAACAT+TGG 0.523494 2_2:+2887025 None:intergenic
TACGGAATTCCTCAGTCAAA+CGG 0.525984 2_2:+2879352 None:intergenic
GAGTTTGAGTTTATCTTCCA+AGG 0.526474 2_2:-2884808 Msa0230690:CDS
AAGACAGAGCAGAAGAAACC+TGG 0.528230 2_2:-2886459 Msa0230690:CDS
TTATAGTTCGGAAGAGGGTG+AGG 0.529955 2_2:-2886700 Msa0230690:CDS
CAGTGTAGCATAGATAGTTA+GGG 0.529972 2_2:-2887191 Msa0230690:five_prime_UTR
TTGTAGTCATGCATCAAGGT+TGG 0.532619 2_2:-2879414 Msa0230690:intron
GAAGTATGCTTCTCAGTTCG+AGG 0.532683 2_2:+2884623 None:intergenic
TATCGGTGTTAGAGCTGAAA+CGG 0.532983 2_2:-2886973 Msa0230690:CDS
GGAATGGATTCATCTGGGTC+CGG 0.533236 2_2:+2887080 None:intergenic
GAAGGTGCTGACGTGGAAGA+AGG 0.533445 2_2:-2886666 Msa0230690:CDS
TATATCAAATTCATAACCAA+AGG 0.537378 2_2:+2878305 None:intergenic
TGTATATTCTTTATACGGCA+AGG 0.541667 2_2:+2883022 None:intergenic
TGCCATGTCATCAGCTTCAA+CGG 0.544773 2_2:+2886821 None:intergenic
CCATTGCTCTCCTTTAAAGC+AGG 0.546741 2_2:-2882110 Msa0230690:intron
AACTCAGAGATGCAATTTGG+TGG 0.548310 2_2:+2884601 None:intergenic
GGCTCGATTCCTACAAGCAA+TGG 0.551570 2_2:+2879903 None:intergenic
TGAGATGCACAAAATGCAAA+CGG 0.552047 2_2:-2886019 Msa0230690:CDS
GCGTTGTTGAACAACGATGA+AGG 0.552811 2_2:-2886951 Msa0230690:CDS
CCTGCTTTAAAGGAGAGCAA+TGG 0.552913 2_2:+2882110 None:intergenic
GCCGATGATGATTGTGGTCA+TGG 0.553086 2_2:-2884649 Msa0230690:CDS
TTGTTGTCGACGGACGATGA+AGG 0.553268 2_2:-2886846 Msa0230690:CDS
ACTTGGAGAGCTCGAACTCA+TGG 0.555503 2_2:+2885436 None:intergenic
TCACCAAGTCAGAAATCTAA+AGG 0.555814 2_2:-2879826 Msa0230690:intron
AGAGGATGTACCTGAATTGG+AGG 0.558183 2_2:-2882170 Msa0230690:CDS
TGCATTTGAAATTTCAATGG+CGG 0.561423 2_2:-2887162 Msa0230690:exon
AGGTTAAGAATGCCTTTGAA+AGG 0.562396 2_2:+2882996 None:intergenic
ACCACAGGTCCACCAAGGAC+AGG 0.565099 2_2:-2879317 Msa0230690:CDS
ATTAAAGAGAAGAAGAGAGC+TGG 0.566428 2_2:-2886744 Msa0230690:CDS
GGAATACAAGAAGTTGTCAC+TGG 0.567927 2_2:+2884432 None:intergenic
TCAGGCTGGGCAGCAGAATG+AGG 0.568737 2_2:+2884736 None:intergenic
GAATGATGAAGCTGAACAAG+AGG 0.569424 2_2:-2886493 Msa0230690:CDS
TGTTGTTGTGAGCTTCGTTG+TGG 0.569590 2_2:-2884859 Msa0230690:CDS
GCACCTTGAGCAAGACAAGA+GGG 0.570458 2_2:-2882347 Msa0230690:CDS
ATGTACAACTGGTTTAAGCT+GGG 0.570533 2_2:-2884317 Msa0230690:CDS
TGAAGCTGAACAAGAGGAGG+AGG 0.572752 2_2:-2886487 Msa0230690:CDS
GTTGTCACTGGAATCTTCAC+GGG 0.575662 2_2:+2884444 None:intergenic
GAATATACAGATCCTTTCAA+AGG 0.575964 2_2:-2883008 Msa0230690:CDS
ATATCAAATTCATAACCAAA+GGG 0.578315 2_2:+2878306 None:intergenic
GCGGAAACGGTACCGTTGAA+GGG 0.579178 2_2:-2887014 Msa0230690:CDS
AGTTGTCACTGGAATCTTCA+CGG 0.579890 2_2:+2884443 None:intergenic
TTGTACCAATTGTTTAAACA+AGG 0.581322 2_2:+2885981 None:intergenic
ACAGTTTATAGTTCGGAAGA+GGG 0.583088 2_2:-2886705 Msa0230690:CDS
AAGGTATCCTCACTTGAAAG+AGG 0.584254 2_2:-2885652 Msa0230690:CDS
GATGACGTGGCACAAGCTAT+CGG 0.585670 2_2:-2886990 Msa0230690:CDS
TCTTTCAATTTCAAAACCTG+AGG 0.586296 2_2:+2883107 None:intergenic
CTACATGGTGATAATCGAGA+TGG 0.586913 2_2:-2882322 Msa0230690:CDS
ATTTGAAATTTCAATGGCGG+AGG 0.588198 2_2:-2887159 Msa0230690:exon
ACTTGGTGAGGACAACCGGC+AGG 0.588247 2_2:+2879840 None:intergenic
CCACTCACAAATCTCAGGCT+GGG 0.588333 2_2:+2884723 None:intergenic
TTTAGATTTCTGACTTGGTG+AGG 0.588372 2_2:+2879828 None:intergenic
GAGGCCAATTAAGCCAATCT+GGG 0.589315 2_2:+2883126 None:intergenic
TTTGTCTCACCTGAAAATGT+TGG 0.589435 2_2:-2879384 Msa0230690:CDS
CAAGACAAGAGGGAGCTACA+TGG 0.591607 2_2:-2882337 Msa0230690:CDS
TCCCTAAATAAATTAGAAGG+AGG 0.592028 2_2:+2883080 None:intergenic
CAATTAACAGTGGATTGAAG+AGG 0.593067 2_2:-2886090 Msa0230690:intron
AGCTTCTGAATAAAAGTCCA+AGG 0.593398 2_2:+2879882 None:intergenic
GCTGGGAACCGCTTGTCATG+TGG 0.594440 2_2:-2884300 Msa0230690:CDS
TTTGCTCAGGAGCTTGGACG+TGG 0.595460 2_2:-2882906 Msa0230690:CDS
GTCCACCAAGGACAGGTTGG+AGG 0.596001 2_2:-2879310 Msa0230690:intron
AAATGTTCTAAAGCCAGACA+TGG 0.598652 2_2:-2882955 Msa0230690:CDS
ACACAACCTACTGCCAATGT+TGG 0.598702 2_2:-2887038 Msa0230690:CDS
TGAAGAACAAATGGTCGAGA+AGG 0.598904 2_2:-2885373 Msa0230690:CDS
TCCGCGCCAACATTGGCAGT+AGG 0.599431 2_2:+2887032 None:intergenic
AACGGTGGTGTTGTTGTCGA+CGG 0.600381 2_2:-2886856 Msa0230690:CDS
GAATTGGGAAGGTGCTGACG+TGG 0.602384 2_2:-2886673 Msa0230690:CDS
ACCTACTGCCAATGTTGGCG+CGG 0.602878 2_2:-2887033 Msa0230690:CDS
CAGGTCCACCAAGGACAGGT+TGG 0.604718 2_2:-2879313 Msa0230690:CDS
CAATGCTGAACAAGAGTGTG+AGG 0.604968 2_2:-2886778 Msa0230690:CDS
GAAACGTGGTAGGAAGAAGA+AGG 0.606573 2_2:-2886538 Msa0230690:CDS
AAATTCATAACCAAAGGGAG+AGG 0.608230 2_2:+2878311 None:intergenic
GGTGAGGAAAAGAATTGGGA+AGG 0.609015 2_2:-2886684 Msa0230690:CDS
GGTGCTGACGTGGAAGAAGG+AGG 0.610124 2_2:-2886663 Msa0230690:CDS
ACCATGACCACAATCATCAT+CGG 0.612092 2_2:+2884648 None:intergenic
ACGTAAATTTAAAGCTCTGG+GGG 0.612630 2_2:+2884411 None:intergenic
TTACGTGTCAGATTTGGAGG+AGG 0.613999 2_2:-2886577 Msa0230690:CDS
AAATGACGAAGATGAACAAG+AGG 0.614355 2_2:-2886403 Msa0230690:CDS
GATCAGGAATGGATTCATCT+GGG 0.615316 2_2:+2887075 None:intergenic
ACTTCCTCCTCTTTCAAGTG+AGG 0.615486 2_2:+2885645 None:intergenic
AGCACCTTGAGCAAGACAAG+AGG 0.618569 2_2:-2882348 Msa0230690:CDS
GGATTCATCTGGGTCCGGAA+CGG 0.621269 2_2:+2887085 None:intergenic
TGATGAAGCTGAACAAGAGG+AGG 0.621390 2_2:-2886490 Msa0230690:CDS
TTCCGTTGAAGCTGATGACA+TGG 0.621539 2_2:-2886823 Msa0230690:CDS
TTCATGGTGGAAAAGAAGAG+AGG 0.621997 2_2:-2884774 Msa0230690:CDS
AATTAGGCTTCAAGATGCAG+AGG 0.623081 2_2:-2884548 Msa0230690:CDS
TTGCAATTACCACAGCACAC+TGG 0.624403 2_2:+2885609 None:intergenic
TCAGAGAAATGACAAGGGCA+GGG 0.624776 2_2:-2886045 Msa0230690:CDS
TTTCAGGCAACTTCACAGCA+AGG 0.625295 2_2:+2882976 None:intergenic
TCATGGTGGAAAAGAAGAGA+GGG 0.625856 2_2:-2884773 Msa0230690:CDS
GTTGTGTGAGAAAGAGGCAA+AGG 0.627339 2_2:-2886629 Msa0230690:CDS
TGAAGTGAAATTGAAATCTG+AGG 0.628039 2_2:-2882401 Msa0230690:CDS
AATAAACAAACGGAATCCAA+AGG 0.628262 2_2:-2886229 Msa0230690:intron
GAAGTGAAATTGAAATCTGA+GGG 0.629648 2_2:-2882400 Msa0230690:CDS
TTCCACCATGAAGATAATCA+CGG 0.630533 2_2:+2884785 None:intergenic
TTAACAAATTGGAGAAAACA+AGG 0.631124 2_2:-2878351 Msa0230690:CDS
GCCACGTCATCACCCTTCAA+CGG 0.632095 2_2:+2887002 None:intergenic
GTAAGCTTCCGATAAACCAC+AGG 0.632121 2_2:-2879332 Msa0230690:CDS
CCAAAAGCCGATGATGATTG+TGG 0.633999 2_2:-2884655 Msa0230690:CDS
GTGCTGACGTGGAAGAAGGA+GGG 0.635869 2_2:-2886662 Msa0230690:CDS
TATACACAATAACACAAGGA+AGG 0.636388 2_2:-2884473 Msa0230690:CDS
TATATATGCTATGCTTGATG+TGG 0.638461 2_2:-2878374 Msa0230690:CDS
GAAAGAGGAGGAAGTTGCTG+AGG 0.638538 2_2:-2885637 Msa0230690:CDS
GGGTGGCATGCAGATAGTGA+TGG 0.640615 2_2:-2884691 Msa0230690:CDS
GTATCCTCACTTGAAAGAGG+AGG 0.641340 2_2:-2885649 Msa0230690:CDS
ACCGTTGAAGGGTGATGACG+TGG 0.641508 2_2:-2887003 Msa0230690:CDS
TGACGAAGATGAACAAGAGG+GGG 0.641516 2_2:-2886400 Msa0230690:CDS
CTGATATACACAATAACACA+AGG 0.643123 2_2:-2884477 Msa0230690:CDS
TCACTGTATATGTGACTGTG+TGG 0.644617 2_2:+2887126 None:intergenic
GAGGCATGTCCAGTGTGCTG+TGG 0.646992 2_2:-2885618 Msa0230690:CDS
GACGTAAATTTAAAGCTCTG+GGG 0.647211 2_2:+2884410 None:intergenic
CCACTGTAATATGTCTGATG+CGG 0.649776 2_2:-2882865 Msa0230690:intron
CGTTGTGGGAAGCTTCTAGG+TGG 0.657294 2_2:-2884844 Msa0230690:CDS
ATTATCAAACATGTCAACGT+TGG 0.657373 2_2:+2882294 None:intergenic
AATGTTCTAAAGCCAGACAT+GGG 0.657555 2_2:-2882954 Msa0230690:CDS
TCAATGTCAGAGAAATGACA+AGG 0.658738 2_2:-2886051 Msa0230690:CDS
AATGACGAAGATGAACAAGA+GGG 0.659397 2_2:-2886402 Msa0230690:CDS
GTGAGTGGTCAAGATTCGGG+TGG 0.671679 2_2:-2884708 Msa0230690:CDS
GGCCGTGATTATCTTCATGG+TGG 0.676321 2_2:-2884787 Msa0230690:CDS
CCCAGCCTGAGATTTGTGAG+TGG 0.676512 2_2:-2884723 Msa0230690:CDS
AATGCACGCCACATGACAAG+CGG 0.682465 2_2:+2884292 None:intergenic
TGAGTGCTTCCGTTTGACTG+AGG 0.694932 2_2:-2879361 Msa0230690:CDS
ATGACGAAGATGAACAAGAG+GGG 0.700639 2_2:-2886401 Msa0230690:CDS
TGATTGCTTAGATTGGTGTG+AGG 0.703268 2_2:-2884218 Msa0230690:intron
ATGAACTCAGCACAATGACG+AGG 0.704061 2_2:+2883050 None:intergenic
CAACGATGAAGGTGATGACG+TGG 0.706445 2_2:-2886940 Msa0230690:CDS
GATAAACCACAGGTCCACCA+AGG 0.718071 2_2:-2879322 Msa0230690:CDS
CAATGTCAGAGAAATGACAA+GGG 0.723230 2_2:-2886050 Msa0230690:CDS
CCGCATCAGACATATTACAG+TGG 0.743850 2_2:+2882865 None:intergenic
CGATGAAGGTGATGACGTGG+TGG 0.749030 2_2:-2886937 Msa0230690:CDS
TCAATGGCACTGGAGCAAAG+GGG 0.769506 2_2:-2884368 Msa0230690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATATTATTATTGGTT+TGG - chr2_2:2879659-2879678 Msa0230690:intron 10.0%
!!! TTATACTGTTATTTTTTAAT+TGG - chr2_2:2882747-2882766 Msa0230690:intron 10.0%
!! TTTAATACAAATTTATTAAG+TGG - chr2_2:2883758-2883777 Msa0230690:intron 10.0%
!!! ATTGTTTAAATTTTTTGAAT+TGG - chr2_2:2886475-2886494 Msa0230690:CDS 10.0%
!! ATGTTAAATTACAATTTATA+GGG + chr2_2:2886556-2886575 None:intergenic 10.0%
!! TATGTTAAATTACAATTTAT+AGG + chr2_2:2886557-2886576 None:intergenic 10.0%
!! ATAATAAAGGTTATTCTTTA+AGG - chr2_2:2879218-2879237 Msa0230690:intron 15.0%
!! TGTCGAAAAAATATTATTAT+CGG - chr2_2:2879787-2879806 Msa0230690:intron 15.0%
!!! AAAAAATATTATTATCGGTT+TGG - chr2_2:2879792-2879811 Msa0230690:intron 15.0%
!!! TTTTTAATTGGATATCATAT+TGG - chr2_2:2882759-2882778 Msa0230690:intron 15.0%
!!! AATGTGTTTCTTTTATAATT+TGG - chr2_2:2883062-2883081 Msa0230690:CDS 15.0%
!!! CTTTTATAATTTGGAATTTT+AGG - chr2_2:2883071-2883090 Msa0230690:CDS 15.0%
!! GCTTATTTATTCTTATAATT+TGG + chr2_2:2884724-2884743 None:intergenic 15.0%
!!! TATTATTTTCGTATGTTTTT+TGG - chr2_2:2885522-2885541 Msa0230690:intron 15.0%
!!! ATTATTTTCGTATGTTTTTT+GGG - chr2_2:2885523-2885542 Msa0230690:intron 15.0%
!! CAAATATTGTACTAAAATTT+AGG + chr2_2:2885802-2885821 None:intergenic 15.0%
!! CATCAATCATAATTATATAA+TGG + chr2_2:2886924-2886943 None:intergenic 15.0%
!! AAAAAAGACAGTTTATAGTT+CGG - chr2_2:2878805-2878824 Msa0230690:intron 20.0%
!!! GTTTTATCAGATGATAATAA+AGG - chr2_2:2879205-2879224 Msa0230690:intron 20.0%
!! CATGTATATATGTTTGAATT+TGG - chr2_2:2879368-2879387 Msa0230690:CDS 20.0%
!!! GTTTTTGCTTTATTTTATGA+AGG - chr2_2:2879846-2879865 Msa0230690:CDS 20.0%
!!! TTTTTTCTTCTTCTTTCTTT+TGG - chr2_2:2880292-2880311 Msa0230690:intron 20.0%
!! GAAAAAACAAGTACTTTAAA+TGG + chr2_2:2880348-2880367 None:intergenic 20.0%
!!! TCCAATTTTTAATTTGCTTT+TGG - chr2_2:2880395-2880414 Msa0230690:intron 20.0%
!!! CCAATTTTTAATTTGCTTTT+GGG - chr2_2:2880396-2880415 Msa0230690:intron 20.0%
!! ATAAAAATTGCAGAAATTAC+AGG + chr2_2:2882302-2882321 None:intergenic 20.0%
!!! CATAAGCAATATATGTTTTT+GGG + chr2_2:2882589-2882608 None:intergenic 20.0%
!! GACTAGATCTTAATTAATTA+GGG + chr2_2:2883524-2883543 None:intergenic 20.0%
!! AGACTAGATCTTAATTAATT+AGG + chr2_2:2883525-2883544 None:intergenic 20.0%
!! AGTCTATTTATCCTATAAAT+AGG - chr2_2:2883540-2883559 Msa0230690:intron 20.0%
!! ATGATAAATATGGAATAACA+TGG + chr2_2:2884558-2884577 None:intergenic 20.0%
!! TTATTCTTATAATTTGGTCT+AGG + chr2_2:2884718-2884737 None:intergenic 20.0%
!! TATAAGAATAAATAAGCATG+AGG - chr2_2:2884727-2884746 Msa0230690:CDS 20.0%
!! TCTATTCTTATCATAATGTA+AGG + chr2_2:2885219-2885238 None:intergenic 20.0%
!! AGAATAGTTAGAACTTTATT+TGG - chr2_2:2885316-2885335 Msa0230690:intron 20.0%
!! ATTATGTATGTATATCTTGA+TGG - chr2_2:2885392-2885411 Msa0230690:CDS 20.0%
!! ATTTCAAAAAAAACTGACAT+GGG + chr2_2:2885913-2885932 None:intergenic 20.0%
!! TATTTCAAAAAAAACTGACA+TGG + chr2_2:2885914-2885933 None:intergenic 20.0%
!! TTTGTGTTAATGTCAATATA+TGG - chr2_2:2886071-2886090 Msa0230690:CDS 20.0%
! ATTGATCAGTGAAAAGAATT+TGG - chr2_2:2879174-2879193 Msa0230690:intron 25.0%
!!! CGTTTGTTTATTTTTTGCTT+CGG + chr2_2:2879280-2879299 None:intergenic 25.0%
! CGAAGCAAAAAATAAACAAA+CGG - chr2_2:2879278-2879297 Msa0230690:intron 25.0%
! TTGTACCAATTGTTTAAACA+AGG + chr2_2:2879539-2879558 None:intergenic 25.0%
! TTTGTATAGTTGAGGATATT+TGG - chr2_2:2879616-2879635 Msa0230690:intron 25.0%
!!! ATTATTATTGGTTTGGATTG+TGG - chr2_2:2879666-2879685 Msa0230690:intron 25.0%
! ATTTAAGCAAAAACATACAC+CGG + chr2_2:2879707-2879726 None:intergenic 25.0%
! TTTGTATAGTTGAGGATATT+TGG - chr2_2:2879616-2879635 Msa0230690:intron 25.0%
! AATAAAGCAAAAACATACAC+CGG + chr2_2:2879840-2879859 None:intergenic 25.0%
! ACATGAATAGTTAATCTAAG+GGG + chr2_2:2879981-2880000 None:intergenic 25.0%
! CACATGAATAGTTAATCTAA+GGG + chr2_2:2879982-2880001 None:intergenic 25.0%
! TCACATGAATAGTTAATCTA+AGG + chr2_2:2879983-2880002 None:intergenic 25.0%
! CACACATTAATAAAAGGATA+GGG + chr2_2:2880246-2880265 None:intergenic 25.0%
! ACACACATTAATAAAAGGAT+AGG + chr2_2:2880247-2880266 None:intergenic 25.0%
! AAGCAACACACATTAATAAA+AGG + chr2_2:2880252-2880271 None:intergenic 25.0%
! CCCAAAAGCAAATTAAAAAT+TGG + chr2_2:2880399-2880418 None:intergenic 25.0%
! AAGATAAACTCAAACTCAAT+TGG + chr2_2:2880706-2880725 None:intergenic 25.0%
!!! AGGATTTAAGACATTTTCAA+TGG - chr2_2:2881133-2881152 Msa0230690:intron 25.0%
!!! GAGAGTACTTATTTCTTTTT+GGG - chr2_2:2881522-2881541 Msa0230690:intron 25.0%
!!! ACTTATTTCTTTTTGGGATT+AGG - chr2_2:2881528-2881547 Msa0230690:intron 25.0%
! ATTACATATGAATTGAGTGA+TGG + chr2_2:2881581-2881600 None:intergenic 25.0%
!!! AAAATCTTTTGAAGAGATTC+AGG + chr2_2:2881610-2881629 None:intergenic 25.0%
!! TGAATCTCTTCAAAAGATTT+TGG - chr2_2:2881609-2881628 Msa0230690:intron 25.0%
! GATATACCTAATTACTAATC+AGG - chr2_2:2881758-2881777 Msa0230690:intron 25.0%
! TACAATCCTGATTAGTAATT+AGG + chr2_2:2881767-2881786 None:intergenic 25.0%
! AATAGAAAAATAGAAACCAG+AGG + chr2_2:2881981-2882000 None:intergenic 25.0%
!!! AGGTTTTGAAATTGAAAGAT+TGG - chr2_2:2882414-2882433 Msa0230690:CDS 25.0%
! CTTTCCCTAAATAAATTAGA+AGG + chr2_2:2882443-2882462 None:intergenic 25.0%
! GGATCTGTATATTCTTTATA+CGG + chr2_2:2882503-2882522 None:intergenic 25.0%
!! CCATAAGCAATATATGTTTT+TGG + chr2_2:2882590-2882609 None:intergenic 25.0%
! CCAAAAACATATATTGCTTA+TGG - chr2_2:2882587-2882606 Msa0230690:intron 25.0%
! TAATTGGATATCATATTGGA+AGG - chr2_2:2882763-2882782 Msa0230690:intron 25.0%
! TATTAGTAACAAACACACAA+AGG + chr2_2:2882956-2882975 None:intergenic 25.0%
! TTTAAATATTCCTCCAATTC+AGG + chr2_2:2883360-2883379 None:intergenic 25.0%
!!! AATAGTTTTACCTGCTTTAA+AGG + chr2_2:2883420-2883439 None:intergenic 25.0%
! TATTGTGGATACCTATTTAT+AGG + chr2_2:2883554-2883573 None:intergenic 25.0%
! AATGATATAGAGTTATCAGT+GGG + chr2_2:2883715-2883734 None:intergenic 25.0%
! TAATGATATAGAGTTATCAG+TGG + chr2_2:2883716-2883735 None:intergenic 25.0%
!! AGATGGTATCAATTTTATCA+TGG + chr2_2:2883790-2883809 None:intergenic 25.0%
! CTGATACCATACTAAAATTT+GGG + chr2_2:2884432-2884451 None:intergenic 25.0%
! TCTGATACCATACTAAAATT+TGG + chr2_2:2884433-2884452 None:intergenic 25.0%
! TTTGTCTTAGATCTCTTATT+GGG - chr2_2:2884454-2884473 Msa0230690:CDS 25.0%
!! TAAGCTTTATAAGACTACAT+GGG + chr2_2:2884651-2884670 None:intergenic 25.0%
!! TTTTACAAAATCAGCTTGTA+AGG + chr2_2:2884685-2884704 None:intergenic 25.0%
! AAAGAAAGAAACACAATTCT+GGG - chr2_2:2884908-2884927 Msa0230690:CDS 25.0%
! ACTTAATCCAAAATGTAAGT+TGG - chr2_2:2885027-2885046 Msa0230690:intron 25.0%
! CTTAATCCAAAATGTAAGTT+GGG - chr2_2:2885028-2885047 Msa0230690:intron 25.0%
! TATCCAACAGATATGATTAT+CGG - chr2_2:2885146-2885165 Msa0230690:intron 25.0%
! CATATTATATATTGTTCGAC+TGG - chr2_2:2885177-2885196 Msa0230690:intron 25.0%
!!! TCGACTGGTTTATTAATTTA+TGG - chr2_2:2885192-2885211 Msa0230690:intron 25.0%
! TAATGAATTTCCTTTCTTTC+TGG + chr2_2:2885258-2885277 None:intergenic 25.0%
! GTAAAATCTTCATACATGTA+TGG - chr2_2:2885713-2885732 Msa0230690:intron 25.0%
!! AATAAACTTCTAGGAAAACA+AGG + chr2_2:2885748-2885767 None:intergenic 25.0%
!! TGTAGTCTTAATAAACTTCT+AGG + chr2_2:2885757-2885776 None:intergenic 25.0%
!! TAAGACTACAAATTTTCTCT+AGG - chr2_2:2885767-2885786 Msa0230690:intron 25.0%
!!! ATACTGATTCAAGCTTATAT+GGG + chr2_2:2885868-2885887 None:intergenic 25.0%
! TTTATACAATATCAGCATGA+TGG - chr2_2:2885952-2885971 Msa0230690:intron 25.0%
! TTATACAATATCAGCATGAT+GGG - chr2_2:2885953-2885972 Msa0230690:intron 25.0%
!! TTATTTCTTGCAAATTGTTG+AGG - chr2_2:2885985-2886004 Msa0230690:intron 25.0%
! AAAAGTGAGTAAGTGATAAA+TGG + chr2_2:2886011-2886030 None:intergenic 25.0%
! TGATTAAGAGAAAAGAAATC+CGG + chr2_2:2886039-2886058 None:intergenic 25.0%
! AAAGAAGCTAATGACAAAAT+AGG + chr2_2:2886294-2886313 None:intergenic 25.0%
! TTATAATAGTGCCAAACATT+TGG + chr2_2:2886408-2886427 None:intergenic 25.0%
! TACTGCTTATGTTAAAGTTA+TGG - chr2_2:2886865-2886884 Msa0230690:CDS 25.0%
! ACTGCTTATGTTAAAGTTAT+GGG - chr2_2:2886866-2886885 Msa0230690:CDS 25.0%
!!! TATGGGTTTTAGATAAAGAA+CGG - chr2_2:2886883-2886902 Msa0230690:CDS 25.0%
!! ATTTGTTTCTCTATTCTCTT+AGG + chr2_2:2887007-2887026 None:intergenic 25.0%
! TTAACAAATTGGAGAAAACA+AGG - chr2_2:2887166-2887185 Msa0230690:exon 25.0%
! ACCTGCATTTGAAATTTCAA+TGG - chr2_2:2878352-2878371 Msa0230690:CDS 30.0%
! TGCATTTGAAATTTCAATGG+CGG - chr2_2:2878355-2878374 Msa0230690:CDS 30.0%
!!! ATATCTTGTTTTTCTCGATC+AGG + chr2_2:2878626-2878645 None:intergenic 30.0%
TGATCGAGAAAAACAAGATA+TGG - chr2_2:2878625-2878644 Msa0230690:intron 30.0%
GAAAAACAAGATATGGATGT+TGG - chr2_2:2878632-2878651 Msa0230690:intron 30.0%
TTCAACGATTTAATCTTCCT+AGG + chr2_2:2878914-2878933 None:intergenic 30.0%
TAGGAAGATTAAATCGTTGA+AGG - chr2_2:2878913-2878932 Msa0230690:intron 30.0%
AGAAAAAGGAAAGTAGGTTA+TGG - chr2_2:2879082-2879101 Msa0230690:intron 30.0%
AATAAACAAACGGAATCCAA+AGG - chr2_2:2879288-2879307 Msa0230690:intron 30.0%
! TTCTGTTTCTCAATTAACAG+TGG - chr2_2:2879417-2879436 Msa0230690:intron 30.0%
! GCATACCTTGTTTAAACAAT+TGG - chr2_2:2879531-2879550 Msa0230690:intron 30.0%
! TGTTTTACCTTCTCATTTGT+TGG - chr2_2:2879572-2879591 Msa0230690:intron 30.0%
AAGATAACCAACAAATGAGA+AGG + chr2_2:2879582-2879601 None:intergenic 30.0%
AATGAGACTTTGTATAGTTG+AGG - chr2_2:2879608-2879627 Msa0230690:intron 30.0%
AATGAGACTTTGTATAGTTG+AGG - chr2_2:2879608-2879627 Msa0230690:intron 30.0%
!! ATTATTATCGGTTTGGATTG+TGG - chr2_2:2879799-2879818 Msa0230690:intron 30.0%
CATGAATAGTTAATCTAAGG+GGG + chr2_2:2879980-2879999 None:intergenic 30.0%
! ACATTTGAAATGTGATCATC+TGG - chr2_2:2880016-2880035 Msa0230690:intron 30.0%
AAGTTCTTTCAGCATATACT+TGG + chr2_2:2880101-2880120 None:intergenic 30.0%
! TCTTCCATATTTAAGACGAT+TGG - chr2_2:2880120-2880139 Msa0230690:intron 30.0%
TCATCCAATCGTCTTAAATA+TGG + chr2_2:2880127-2880146 None:intergenic 30.0%
! ACAACAAAAAGTGAGACTTT+TGG + chr2_2:2880203-2880222 None:intergenic 30.0%
!!! CTTATTTTTAGGGTAATCTG+CGG + chr2_2:2880465-2880484 None:intergenic 30.0%
!!! AGTACACACGCTTATTTTTA+GGG + chr2_2:2880475-2880494 None:intergenic 30.0%
AAGAACTCGAAGAAACAATT+AGG - chr2_2:2880953-2880972 Msa0230690:intron 30.0%
CTGATATACACAATAACACA+AGG - chr2_2:2881040-2881059 Msa0230690:intron 30.0%
TATACACAATAACACAAGGA+AGG - chr2_2:2881044-2881063 Msa0230690:intron 30.0%
! TGACGTAAATTTAAAGCTCT+GGG + chr2_2:2881111-2881130 None:intergenic 30.0%
! ATGACGTAAATTTAAAGCTC+TGG + chr2_2:2881112-2881131 None:intergenic 30.0%
!! AGCTTTAAATTTACGTCATG+AGG - chr2_2:2881113-2881132 Msa0230690:intron 30.0%
AGTACATTGCTGATAATTAC+AGG + chr2_2:2881177-2881196 None:intergenic 30.0%
AATGTACTTGAATGTACAAC+TGG - chr2_2:2881189-2881208 Msa0230690:intron 30.0%
! TTCATCACGTTTTCTGAATT+TGG - chr2_2:2881500-2881519 Msa0230690:intron 30.0%
!!! GGAGAGTACTTATTTCTTTT+TGG - chr2_2:2881521-2881540 Msa0230690:intron 30.0%
AAACTGTTGGAACAGTAATT+TGG + chr2_2:2881641-2881660 None:intergenic 30.0%
!!! TTACTGTTCCAACAGTTTTT+TGG - chr2_2:2881643-2881662 Msa0230690:intron 30.0%
! CAGTAAGAAACATTTCTAGA+TGG - chr2_2:2881678-2881697 Msa0230690:intron 30.0%
TTATAAGAGATACCAGAACA+TGG - chr2_2:2881714-2881733 Msa0230690:intron 30.0%
CTCATCATCTTATCTTTCAT+AGG - chr2_2:2881879-2881898 Msa0230690:intron 30.0%
AGATCATCTAGTTGAAGTTA+GGG - chr2_2:2882031-2882050 Msa0230690:intron 30.0%
! GAGAACAATATAGTTTTCTC+TGG + chr2_2:2882169-2882188 None:intergenic 30.0%
! TAAGCAAATAGAGTTTTCTC+TGG + chr2_2:2882233-2882252 None:intergenic 30.0%
TCTTTCAATTTCAAAACCTG+AGG + chr2_2:2882413-2882432 None:intergenic 30.0%
GCCTCCTTCTAATTTATTTA+GGG - chr2_2:2882436-2882455 Msa0230690:intron 30.0%
TCCCTAAATAAATTAGAAGG+AGG + chr2_2:2882440-2882459 None:intergenic 30.0%
TGTATATTCTTTATACGGCA+AGG + chr2_2:2882498-2882517 None:intergenic 30.0%
GAATATACAGATCCTTTCAA+AGG - chr2_2:2882509-2882528 Msa0230690:intron 30.0%
! CAAGACATTCTAGAAAAAAC+AGG + chr2_2:2882705-2882724 None:intergenic 30.0%
TGAAGTGAAATTGAAATCTG+AGG - chr2_2:2883116-2883135 Msa0230690:CDS 30.0%
GAAGTGAAATTGAAATCTGA+GGG - chr2_2:2883117-2883136 Msa0230690:CDS 30.0%
ATTATCAAACATGTCAACGT+TGG + chr2_2:2883226-2883245 None:intergenic 30.0%
!!! TGTTCGAGTTTTGGAAAATA+GGG - chr2_2:2883284-2883303 Msa0230690:intron 30.0%
TAAATAGGTATCCACAATAG+TGG - chr2_2:2883555-2883574 Msa0230690:intron 30.0%
AATGAGCGATGTATAATAGA+AGG + chr2_2:2883608-2883627 None:intergenic 30.0%
CCATTGAGTAATTTATTTCG+AGG + chr2_2:2883690-2883709 None:intergenic 30.0%
CCTCGAAATAAATTACTCAA+TGG - chr2_2:2883687-2883706 Msa0230690:intron 30.0%
ATGATATAGAGTTATCAGTG+GGG + chr2_2:2883714-2883733 None:intergenic 30.0%
ATCAAATATACACGTCACAA+AGG - chr2_2:2883842-2883861 Msa0230690:intron 30.0%
! GTACTTCCTGTTCTAATTTT+TGG + chr2_2:2883963-2883982 None:intergenic 30.0%
ACATGCACAAACTGAAAATA+CGG - chr2_2:2884047-2884066 Msa0230690:intron 30.0%
TACTAATATGGAGTTTGGTT+AGG + chr2_2:2884182-2884201 None:intergenic 30.0%
TAACCAAACTCCATATTAGT+AGG - chr2_2:2884181-2884200 Msa0230690:intron 30.0%
AACCAAACTCCATATTAGTA+GGG - chr2_2:2884182-2884201 Msa0230690:intron 30.0%
! ACCATACTAAAATTTGGGTT+AGG + chr2_2:2884427-2884446 None:intergenic 30.0%
GTTTGTCTTAGATCTCTTAT+TGG - chr2_2:2884453-2884472 Msa0230690:CDS 30.0%
! CTAAGCTTTATAAGACTACA+TGG + chr2_2:2884652-2884671 None:intergenic 30.0%
!! CATGTAGTCTTATAAAGCTT+AGG - chr2_2:2884650-2884669 Msa0230690:CDS 30.0%
CACATAAGACAAAAATCCTT+AGG - chr2_2:2884783-2884802 Msa0230690:CDS 30.0%
GAAAGAAAGAAACACAATTC+TGG - chr2_2:2884907-2884926 Msa0230690:CDS 30.0%
ATACCGATAATCATATCTGT+TGG + chr2_2:2885152-2885171 None:intergenic 30.0%
TTACCTTTAGATTTCTGACT+TGG + chr2_2:2885697-2885716 None:intergenic 30.0%
!! CATACTGATTCAAGCTTATA+TGG + chr2_2:2885869-2885888 None:intergenic 30.0%
CATATAAGCTTGAATCAGTA+TGG - chr2_2:2885867-2885886 Msa0230690:intron 30.0%
GATTAAGAGAAAAGAAATCC+GGG + chr2_2:2886038-2886057 None:intergenic 30.0%
! TGTCATTAGCTTCTTTCAAA+TGG - chr2_2:2886298-2886317 Msa0230690:CDS 30.0%
CAGATATCAGTGTTTCAATT+CGG + chr2_2:2886438-2886457 None:intergenic 30.0%
TTTATAATCTACGGTCTCAA+CGG + chr2_2:2886511-2886530 None:intergenic 30.0%
ACCTCGTAGTTTATAATCTA+CGG + chr2_2:2886520-2886539 None:intergenic 30.0%
! AAGAAAGTACAGATTGTCTA+CGG + chr2_2:2886634-2886653 None:intergenic 30.0%
ACAATCTGTACTTTCTTAGT+GGG - chr2_2:2886637-2886656 Msa0230690:CDS 30.0%
! GAGCTTTTAGTGATTTTCAA+AGG + chr2_2:2886710-2886729 None:intergenic 30.0%
! AAGCTCTAGTAAAGACATAA+AGG - chr2_2:2886724-2886743 Msa0230690:CDS 30.0%
!! ATAAAGGTTTCGTGTTGATT+TGG - chr2_2:2886740-2886759 Msa0230690:CDS 30.0%
TTAAGATTGCAATCATGTGT+TGG - chr2_2:2886822-2886841 Msa0230690:CDS 30.0%
TATATATGCTATGCTTGATG+TGG - chr2_2:2887143-2887162 Msa0230690:CDS 30.0%
CAGTGTAGCATAGATAGTTA+GGG - chr2_2:2878326-2878345 Msa0230690:CDS 35.0%
GCCATTGAAATTTCAAATGC+AGG + chr2_2:2878356-2878375 None:intergenic 35.0%
! ATTTGAAATTTCAATGGCGG+AGG - chr2_2:2878358-2878377 Msa0230690:CDS 35.0%
ATTAAAGAGAAGAAGAGAGC+TGG - chr2_2:2878773-2878792 Msa0230690:intron 35.0%
ACAGTTTATAGTTCGGAAGA+GGG - chr2_2:2878812-2878831 Msa0230690:intron 35.0%
AGGAGGATATGAAGAAAAAG+TGG - chr2_2:2878957-2878976 Msa0230690:intron 35.0%
ATGAAGAAAAAGTGGAAACG+TGG - chr2_2:2878965-2878984 Msa0230690:intron 35.0%
GAAGAAGAAGGTCATAATTG+AGG - chr2_2:2878991-2879010 Msa0230690:intron 35.0%
AGAAGAAACCTGGTAGAAAA+AGG - chr2_2:2879068-2879087 Msa0230690:intron 35.0%
AAATGACGAAGATGAACAAG+AGG - chr2_2:2879114-2879133 Msa0230690:intron 35.0%
AATGACGAAGATGAACAAGA+GGG - chr2_2:2879115-2879134 Msa0230690:intron 35.0%
AGATCATGTTATGTCACCTT+TGG + chr2_2:2879307-2879326 None:intergenic 35.0%
TACACGTGTTTGCATAATTG+TGG - chr2_2:2879394-2879413 Msa0230690:CDS 35.0%
!! CAATTAACAGTGGATTGAAG+AGG - chr2_2:2879427-2879446 Msa0230690:intron 35.0%
! TGTCATTTCTCTGACATTGA+TGG + chr2_2:2879466-2879485 None:intergenic 35.0%
TCAATGTCAGAGAAATGACA+AGG - chr2_2:2879466-2879485 Msa0230690:intron 35.0%
CAATGTCAGAGAAATGACAA+GGG - chr2_2:2879467-2879486 Msa0230690:intron 35.0%
TGAGATGCACAAAATGCAAA+CGG - chr2_2:2879498-2879517 Msa0230690:intron 35.0%
AGAAGGTAAAACAGAAGTGA+TGG + chr2_2:2879565-2879584 None:intergenic 35.0%
!! TTATTGGTTTGGATTGTGGA+TGG - chr2_2:2879670-2879689 Msa0230690:intron 35.0%
ACGATTGGATGAAGAACAAA+TGG - chr2_2:2880135-2880154 Msa0230690:intron 35.0%
GAGATAGAAGCAAAGAGAAA+AGG - chr2_2:2880166-2880185 Msa0230690:intron 35.0%
GGGAAAAAAGCAAGAAGAAA+TGG + chr2_2:2880226-2880245 None:intergenic 35.0%
AAAAAAGAGCCATGAAGCAT+GGG + chr2_2:2880277-2880296 None:intergenic 35.0%
AAAAAAAGAGCCATGAAGCA+TGG + chr2_2:2880278-2880297 None:intergenic 35.0%
!! CAGTACACACGCTTATTTTT+AGG + chr2_2:2880476-2880495 None:intergenic 35.0%
CTAAAAATAAGCGTGTGTAC+TGG - chr2_2:2880474-2880493 Msa0230690:intron 35.0%
! GAGTTTGAGTTTATCTTCCA+AGG - chr2_2:2880709-2880728 Msa0230690:intron 35.0%
TTCCACCATGAAGATAATCA+CGG + chr2_2:2880735-2880754 None:intergenic 35.0%
ATTTGTGAGTGGTCAAGATT+CGG - chr2_2:2880805-2880824 Msa0230690:intron 35.0%
ACTAACTCAGAGATGCAATT+TGG + chr2_2:2880922-2880941 None:intergenic 35.0%
ATATCAGTTGCATTCCTAAC+AGG + chr2_2:2881027-2881046 None:intergenic 35.0%
! ACGTAAATTTAAAGCTCTGG+GGG + chr2_2:2881109-2881128 None:intergenic 35.0%
! GACGTAAATTTAAAGCTCTG+GGG + chr2_2:2881110-2881129 None:intergenic 35.0%
! TAAGACATTTTCAATGGCAC+TGG - chr2_2:2881139-2881158 Msa0230690:intron 35.0%
! AATGTACAACTGGTTTAAGC+TGG - chr2_2:2881199-2881218 Msa0230690:intron 35.0%
! ATGTACAACTGGTTTAAGCT+GGG - chr2_2:2881200-2881219 Msa0230690:intron 35.0%
GCTTGGTATTTCTTATCTGA+CGG + chr2_2:2881251-2881270 None:intergenic 35.0%
! TACCAAGCACAAAACACTTT+TGG - chr2_2:2881263-2881282 Msa0230690:intron 35.0%
!!! ATCCAAAAGTGTTTTGTGCT+TGG + chr2_2:2881268-2881287 None:intergenic 35.0%
AGGCAATTGATTGCTTAGAT+TGG - chr2_2:2881292-2881311 Msa0230690:intron 35.0%
TCTGAGTATGCACAAGAAAA+AGG + chr2_2:2882014-2882033 None:intergenic 35.0%
CAGATCATCTAGTTGAAGTT+AGG - chr2_2:2882030-2882049 Msa0230690:intron 35.0%
TGGTCTGTTCAACTATAGAA+AGG + chr2_2:2882149-2882168 None:intergenic 35.0%
TGGTCTGTTCAACTATAGAA+AGG + chr2_2:2882149-2882168 None:intergenic 35.0%
!! TAGATGGACGTGTCATTTAA+AGG + chr2_2:2882276-2882295 None:intergenic 35.0%
CAGAAATTACAGGCAATAGA+TGG + chr2_2:2882292-2882311 None:intergenic 35.0%
AATGTGCACCAATTCTTTAC+TGG - chr2_2:2882353-2882372 Msa0230690:CDS 35.0%
ATGTGCACCAATTCTTTACT+GGG - chr2_2:2882354-2882373 Msa0230690:CDS 35.0%
TTGTGTACCCAGTAAAGAAT+TGG + chr2_2:2882364-2882383 None:intergenic 35.0%
TTCTTTACTGGGTACACAAA+TGG - chr2_2:2882365-2882384 Msa0230690:CDS 35.0%
GGCCTCCTTCTAATTTATTT+AGG - chr2_2:2882435-2882454 Msa0230690:intron 35.0%
AGGTTAAGAATGCCTTTGAA+AGG + chr2_2:2882524-2882543 None:intergenic 35.0%
!!! TCTGGCTTTAGAACATTTTC+AGG + chr2_2:2882560-2882579 None:intergenic 35.0%
!! AAATGTTCTAAAGCCAGACA+TGG - chr2_2:2882562-2882581 Msa0230690:intron 35.0%
!! AATGTTCTAAAGCCAGACAT+GGG - chr2_2:2882563-2882582 Msa0230690:intron 35.0%
! TATTGCTTATGGATTTGCTC+AGG - chr2_2:2882598-2882617 Msa0230690:intron 35.0%
ATTCAATTCTCTGTCTTTCC+TGG - chr2_2:2882679-2882698 Msa0230690:intron 35.0%
!! CATAATGCATTGGCTTACAA+AGG + chr2_2:2882816-2882835 None:intergenic 35.0%
!! CTTTTGGGTCAGTTTCTTAA+TGG + chr2_2:2883151-2883170 None:intergenic 35.0%
!! GCAAAATAGTGTTCGAGTTT+TGG - chr2_2:2883275-2883294 Msa0230690:intron 35.0%
!!! GTGTTCGAGTTTTGGAAAAT+AGG - chr2_2:2883283-2883302 Msa0230690:intron 35.0%
!!! GTTCGAGTTTTGGAAAATAG+GGG - chr2_2:2883285-2883304 Msa0230690:intron 35.0%
AATAGGGGTGATTCTTTAGA+TGG - chr2_2:2883300-2883319 Msa0230690:intron 35.0%
!! AGAAGCATTTCAGAGAGTTT+AGG - chr2_2:2883379-2883398 Msa0230690:intron 35.0%
! GTAATTTATTTCGAGGTGCT+GGG + chr2_2:2883683-2883702 None:intergenic 35.0%
AGTAATTTATTTCGAGGTGC+TGG + chr2_2:2883684-2883703 None:intergenic 35.0%
AAACCAGTAATCAGCTAAAG+AGG - chr2_2:2883935-2883954 Msa0230690:intron 35.0%
! ACAATTCAACCTCTGAAGAA+AGG - chr2_2:2884002-2884021 Msa0230690:intron 35.0%
TTTCAGTTTGTGCATGTTGT+GGG + chr2_2:2884044-2884063 None:intergenic 35.0%
! TTTTCAGTTTGTGCATGTTG+TGG + chr2_2:2884045-2884064 None:intergenic 35.0%
CATGCACAAACTGAAAATAC+GGG - chr2_2:2884048-2884067 Msa0230690:intron 35.0%
TAATATGGAGTTTGGTTAGG+AGG + chr2_2:2884179-2884198 None:intergenic 35.0%
ACCAAACTCCATATTAGTAG+GGG - chr2_2:2884183-2884202 Msa0230690:intron 35.0%
! CAATTTTTGTGTTAACCCTC+AGG + chr2_2:2884225-2884244 None:intergenic 35.0%
ATAATGCAGGTGGTATAACA+TGG + chr2_2:2884267-2884286 None:intergenic 35.0%
TGTCTTATGTAGTGCTTATC+TGG - chr2_2:2884354-2884373 Msa0230690:CDS 35.0%
GCAATCTTTACCTTATGAGT+CGG - chr2_2:2884381-2884400 Msa0230690:CDS 35.0%
!! GCCTAACCCAAATTTTAGTA+TGG - chr2_2:2884423-2884442 Msa0230690:CDS 35.0%
TGAAGAGCGGATGATAAATA+TGG + chr2_2:2884568-2884587 None:intergenic 35.0%
ATATTTATCATCCGCTCTTC+AGG - chr2_2:2884567-2884586 Msa0230690:CDS 35.0%
! TAATTTGGTCTAGGACTAAC+TGG + chr2_2:2884709-2884728 None:intergenic 35.0%
CTCATGAAAAGACGAAAAAG+AGG - chr2_2:2884974-2884993 Msa0230690:intron 35.0%
! AATCCAAAATGTAAGTTGGG+TGG - chr2_2:2885031-2885050 Msa0230690:intron 35.0%
! ATCCAAAATGTAAGTTGGGT+GGG - chr2_2:2885032-2885051 Msa0230690:intron 35.0%
TAAGTACCACAATGGTTAGT+GGG + chr2_2:2885092-2885111 None:intergenic 35.0%
TTGAAGACTAAGTACCACAA+TGG + chr2_2:2885100-2885119 None:intergenic 35.0%
AGTTCAATGACCAGAAAGAA+AGG - chr2_2:2885245-2885264 Msa0230690:intron 35.0%
ATACCAGTCCAAAAAGTCAT+TGG - chr2_2:2885287-2885306 Msa0230690:intron 35.0%
! CTTACCAACCAATGACTTTT+TGG + chr2_2:2885298-2885317 None:intergenic 35.0%
TGAATAACCTACATTACCAC+AGG + chr2_2:2885425-2885444 None:intergenic 35.0%
AGAGCATAAGAGGAAACTTA+AGG - chr2_2:2885478-2885497 Msa0230690:intron 35.0%
!!! TTCGTATGTTTTTTGGGAAG+TGG - chr2_2:2885529-2885548 Msa0230690:intron 35.0%
!!! TCGTATGTTTTTTGGGAAGT+GGG - chr2_2:2885530-2885549 Msa0230690:intron 35.0%
TGGTGACTGTTTATATGTGT+TGG + chr2_2:2885572-2885591 None:intergenic 35.0%
ACTGTCAAGTGTCAACAAAA+TGG + chr2_2:2885592-2885611 None:intergenic 35.0%
AGCTTCTGAATAAAAGTCCA+AGG + chr2_2:2885638-2885657 None:intergenic 35.0%
! TGGACTTTTATTCAGAAGCT+AGG - chr2_2:2885638-2885657 Msa0230690:CDS 35.0%
!! TTTAGATTTCTGACTTGGTG+AGG + chr2_2:2885692-2885711 None:intergenic 35.0%
TCACCAAGTCAGAAATCTAA+AGG - chr2_2:2885691-2885710 Msa0230690:intron 35.0%
TTCAAGCTTATATGGGTATG+AGG + chr2_2:2885861-2885880 None:intergenic 35.0%
!!! ACTTACTCACTTTTTATGCC+CGG - chr2_2:2886017-2886036 Msa0230690:CDS 35.0%
GATGCATGACTACAAAAAGA+CGG + chr2_2:2886098-2886117 None:intergenic 35.0%
! CTTTTTGTAGTCATGCATCA+AGG - chr2_2:2886099-2886118 Msa0230690:intron 35.0%
TTTGTCTCACCTGAAAATGT+TGG - chr2_2:2886133-2886152 Msa0230690:intron 35.0%
! ATCCTGCTGTTTATATGTGT+TGG - chr2_2:2886256-2886275 Msa0230690:CDS 35.0%
TACCAACACATATAAACAGC+AGG + chr2_2:2886261-2886280 None:intergenic 35.0%
TAGAACAAGTCGTCTTGATT+GGG - chr2_2:2886368-2886387 Msa0230690:CDS 35.0%
TTTAGGTCACTCCAAATGTT+TGG - chr2_2:2886394-2886413 Msa0230690:CDS 35.0%
ACCGTAGATTATAAACTACG+AGG - chr2_2:2886516-2886535 Msa0230690:CDS 35.0%
GACAATCTGTACTTTCTTAG+TGG - chr2_2:2886636-2886655 Msa0230690:CDS 35.0%
TGTACTTTCTTAGTGGGATA+AGG - chr2_2:2886643-2886662 Msa0230690:CDS 35.0%
TTTCTTAGTGGGATAAGGTT+TGG - chr2_2:2886648-2886667 Msa0230690:CDS 35.0%
GCTTGATGTGGTTAACAAAT+TGG - chr2_2:2887155-2887174 Msa0230690:exon 35.0%
GCAGTGTAGCATAGATAGTT+AGG - chr2_2:2878325-2878344 Msa0230690:CDS 40.0%
TCACTGTATATGTGACTGTG+TGG + chr2_2:2878394-2878413 None:intergenic 40.0%
! GATCAGGAATGGATTCATCT+GGG + chr2_2:2878445-2878464 None:intergenic 40.0%
! TGATCAGGAATGGATTCATC+TGG + chr2_2:2878446-2878465 None:intergenic 40.0%
!! TATCGGTGTTAGAGCTGAAA+CGG - chr2_2:2878544-2878563 Msa0230690:intron 40.0%
TATGGATGTTGGCGCAAAAA+CGG - chr2_2:2878643-2878662 Msa0230690:intron 40.0%
GACAGTTTATAGTTCGGAAG+AGG - chr2_2:2878811-2878830 Msa0230690:intron 40.0%
AAGAGGGTGAGGAAAAGAAT+TGG - chr2_2:2878828-2878847 Msa0230690:intron 40.0%
AGAGGGTGAGGAAAAGAATT+GGG - chr2_2:2878829-2878848 Msa0230690:intron 40.0%
GGAAGATTACGTGTCAGATT+TGG - chr2_2:2878934-2878953 Msa0230690:intron 40.0%
AGATTACGTGTCAGATTTGG+AGG - chr2_2:2878937-2878956 Msa0230690:intron 40.0%
AGAAAAAGTGGAAACGTGGT+AGG - chr2_2:2878969-2878988 Msa0230690:intron 40.0%
GAATGATGAAGCTGAACAAG+AGG - chr2_2:2879024-2879043 Msa0230690:intron 40.0%
! CCTACTTTCCTTTTTCTACC+AGG + chr2_2:2879079-2879098 None:intergenic 40.0%
CCTGGTAGAAAAAGGAAAGT+AGG - chr2_2:2879076-2879095 Msa0230690:intron 40.0%
ATGACGAAGATGAACAAGAG+GGG - chr2_2:2879116-2879135 Msa0230690:intron 40.0%
! CTGACATTGATGGCACATTA+AGG + chr2_2:2879456-2879475 None:intergenic 40.0%
!!! GTGGATGGTGATATTTTGAC+CGG - chr2_2:2879685-2879704 Msa0230690:intron 40.0%
!! TTATCGGTTTGGATTGTGGA+TGG - chr2_2:2879803-2879822 Msa0230690:intron 40.0%
!!! GTGGATGGTGATATTTTGAC+CGG - chr2_2:2879685-2879704 Msa0230690:intron 40.0%
! AAGGTATCCTCACTTGAAAG+AGG - chr2_2:2879865-2879884 Msa0230690:CDS 40.0%
TGAAGAACAAATGGTCGAGA+AGG - chr2_2:2880144-2880163 Msa0230690:intron 40.0%
! AAATAAGCGTGTGTACTGGT+AGG - chr2_2:2880478-2880497 Msa0230690:intron 40.0%
! AATAAGCGTGTGTACTGGTA+GGG - chr2_2:2880479-2880498 Msa0230690:intron 40.0%
! AGCATTTTGTACAGCTTCTG+TGG + chr2_2:2880618-2880637 None:intergenic 40.0%
! TTCATGGTGGAAAAGAAGAG+AGG - chr2_2:2880743-2880762 Msa0230690:intron 40.0%
! TCATGGTGGAAAAGAAGAGA+GGG - chr2_2:2880744-2880763 Msa0230690:intron 40.0%
TTTGTGAGTGGTCAAGATTC+GGG - chr2_2:2880806-2880825 Msa0230690:intron 40.0%
ACCATGACCACAATCATCAT+CGG + chr2_2:2880872-2880891 None:intergenic 40.0%
AACTCAGAGATGCAATTTGG+TGG + chr2_2:2880919-2880938 None:intergenic 40.0%
AATTAGGCTTCAAGATGCAG+AGG - chr2_2:2880969-2880988 Msa0230690:intron 40.0%
! GTTCTTGTTTGAAGCCTGTT+AGG - chr2_2:2881010-2881029 Msa0230690:intron 40.0%
AGTTGTCACTGGAATCTTCA+CGG + chr2_2:2881077-2881096 None:intergenic 40.0%
GGAATACAAGAAGTTGTCAC+TGG + chr2_2:2881088-2881107 None:intergenic 40.0%
! GCACAAAACACTTTTGGATG+TGG - chr2_2:2881269-2881288 Msa0230690:intron 40.0%
! CAAAACACTTTTGGATGTGG+AGG - chr2_2:2881272-2881291 Msa0230690:intron 40.0%
TGATTGCTTAGATTGGTGTG+AGG - chr2_2:2881299-2881318 Msa0230690:intron 40.0%
!!! CTGTTCCAACAGTTTTTTGG+CGG - chr2_2:2881646-2881665 Msa0230690:intron 40.0%
ATATGACGTTAGCCATGTTC+TGG + chr2_2:2881729-2881748 None:intergenic 40.0%
GACGAGCGAAGTTATAACTA+AGG + chr2_2:2881829-2881848 None:intergenic 40.0%
GGTAGATCAAGCGAAAAAAC+AGG + chr2_2:2881932-2881951 None:intergenic 40.0%
!! AGGGCAAGAAGAAAGTATCT+GGG + chr2_2:2881953-2881972 None:intergenic 40.0%
!! AAGGGCAAGAAGAAAGTATC+TGG + chr2_2:2881954-2881973 None:intergenic 40.0%
ATAGAAACCAGAGGATGCAA+GGG + chr2_2:2881972-2881991 None:intergenic 40.0%
AATAGAAACCAGAGGATGCA+AGG + chr2_2:2881973-2881992 None:intergenic 40.0%
TTGCGTTGTTGAATGAATGC+AGG - chr2_2:2882322-2882341 Msa0230690:CDS 40.0%
CCACTGTAATATGTCTGATG+CGG - chr2_2:2882652-2882671 Msa0230690:intron 40.0%
! CATTCTAGAAAAAACAGGCC+AGG + chr2_2:2882700-2882719 None:intergenic 40.0%
CCAAACAGCTCATAATGCAT+TGG + chr2_2:2882826-2882845 None:intergenic 40.0%
CCAATGCATTATGAGCTGTT+TGG - chr2_2:2882823-2882842 Msa0230690:intron 40.0%
CTACATGGTGATAATCGAGA+TGG - chr2_2:2883195-2883214 Msa0230690:intron 40.0%
! TTGCTCGTCTGAAGCATTTA+TGG + chr2_2:2883259-2883278 None:intergenic 40.0%
ATTCTTTAGATGGTGCTCTC+TGG - chr2_2:2883310-2883329 Msa0230690:intron 40.0%
TTCTTTAGATGGTGCTCTCT+GGG - chr2_2:2883311-2883330 Msa0230690:intron 40.0%
!!! GTGCTCTCTGGGATATTTTT+CGG - chr2_2:2883322-2883341 Msa0230690:intron 40.0%
!! CTGCTTTAAAGGAGAGCAAT+GGG + chr2_2:2883409-2883428 None:intergenic 40.0%
AAATGGGGAAACCACTATTG+TGG + chr2_2:2883569-2883588 None:intergenic 40.0%
ACAATAGTGGTTTCCCCATT+TGG - chr2_2:2883568-2883587 Msa0230690:intron 40.0%
CAATAGTGGTTTCCCCATTT+GGG - chr2_2:2883569-2883588 Msa0230690:intron 40.0%
ACCCACTTAAGAACCCAAAT+GGG + chr2_2:2883585-2883604 None:intergenic 40.0%
! GAGGTGCCAAAAATTAGAAC+AGG - chr2_2:2883954-2883973 Msa0230690:intron 40.0%
GAGACTATTCCTTTCTTCAG+AGG + chr2_2:2884014-2884033 None:intergenic 40.0%
TGTTTAATGAGCTCCACCAA+AGG - chr2_2:2884087-2884106 Msa0230690:intron 40.0%
TTGAACAATTCGTCCTTTGG+TGG + chr2_2:2884103-2884122 None:intergenic 40.0%
CTCTTGAACAATTCGTCCTT+TGG + chr2_2:2884106-2884125 None:intergenic 40.0%
CCAAACTCCATATTAGTAGG+GGG - chr2_2:2884184-2884203 Msa0230690:intron 40.0%
! ATCTGAAGCATGGATAATGC+AGG + chr2_2:2884280-2884299 None:intergenic 40.0%
!! ACCTTATGAGTCGGTTTTGT+AGG - chr2_2:2884390-2884409 Msa0230690:CDS 40.0%
!! CCTTATGAGTCGGTTTTGTA+GGG - chr2_2:2884391-2884410 Msa0230690:CDS 40.0%
ATGTGCATTCATGTTCGTGA+GGG - chr2_2:2884519-2884538 Msa0230690:CDS 40.0%
AATGAAGACACACATCCTCA+AGG - chr2_2:2884751-2884770 Msa0230690:CDS 40.0%
TATGTGCGAACAAATCCTTG+AGG + chr2_2:2884769-2884788 None:intergenic 40.0%
CTCATGAAAAGACGAAGAAG+AGG - chr2_2:2884869-2884888 Msa0230690:CDS 40.0%
!! GAAGAGGAAGCTTTGTTTGT+AGG - chr2_2:2884885-2884904 Msa0230690:CDS 40.0%
! TCCAAAATGTAAGTTGGGTG+GGG - chr2_2:2885033-2885052 Msa0230690:intron 40.0%
ATATTCCCCACTAACCATTG+TGG - chr2_2:2885083-2885102 Msa0230690:CDS 40.0%
AAGTACCACAATGGTTAGTG+GGG + chr2_2:2885091-2885110 None:intergenic 40.0%
CTAAGTACCACAATGGTTAG+TGG + chr2_2:2885093-2885112 None:intergenic 40.0%
! CAACCAATGACTTTTTGGAC+TGG + chr2_2:2885293-2885312 None:intergenic 40.0%
CAGTCCAAAAAGTCATTGGT+TGG - chr2_2:2885291-2885310 Msa0230690:intron 40.0%
CCTTTGTATACAGCAGCAAT+CGG + chr2_2:2885345-2885364 None:intergenic 40.0%
! ACATTAGCCTGTGGTAATGT+AGG - chr2_2:2885415-2885434 Msa0230690:CDS 40.0%
ATGCTCTCGAGTCAGATAAA+AGG + chr2_2:2885465-2885484 None:intergenic 40.0%
GCATAAGAGGAAACTTAAGG+AGG - chr2_2:2885481-2885500 Msa0230690:intron 40.0%
AGGAAACTTAAGGAGGAGTA+TGG - chr2_2:2885488-2885507 Msa0230690:intron 40.0%
TTGTAGTCATGCATCAAGGT+TGG - chr2_2:2886103-2886122 Msa0230690:intron 40.0%
! AAGCACTCACCAACATTTTC+AGG + chr2_2:2886145-2886164 None:intergenic 40.0%
TACGGAATTCCTCAGTCAAA+CGG + chr2_2:2886168-2886187 None:intergenic 40.0%
TGTGGTTTATCGGAAGCTTA+CGG + chr2_2:2886186-2886205 None:intergenic 40.0%
! CGACTTGTTCTAGTAGGTTT+AGG + chr2_2:2886360-2886379 None:intergenic 40.0%
! TCAAGACGACTTGTTCTAGT+AGG + chr2_2:2886366-2886385 None:intergenic 40.0%
CTAGAACAAGTCGTCTTGAT+TGG - chr2_2:2886367-2886386 Msa0230690:CDS 40.0%
ACCAGCGACTGGTATTTATA+AGG - chr2_2:2886965-2886984 Msa0230690:CDS 40.0%
TCCTTATAAATACCAGTCGC+TGG + chr2_2:2886969-2886988 None:intergenic 40.0%
CCAAAGAAACAGCAACAATC+AGG + chr2_2:2887103-2887122 None:intergenic 40.0%
!! CCTGATTGTTGCTGTTTCTT+TGG - chr2_2:2887100-2887119 Msa0230690:CDS 40.0%
!! GTTGCTGTTTCTTTGGTAAC+AGG - chr2_2:2887107-2887126 Msa0230690:CDS 40.0%
TCGACGATCATGATCAGGAA+TGG + chr2_2:2878456-2878475 None:intergenic 45.0%
GTTTCTCGACGATCATGATC+AGG + chr2_2:2878461-2878480 None:intergenic 45.0%
ACACAACCTACTGCCAATGT+TGG - chr2_2:2878479-2878498 Msa0230690:intron 45.0%
GCGTTGTTGAACAACGATGA+AGG - chr2_2:2878566-2878585 Msa0230690:intron 45.0%
TTCCGTTGAAGCTGATGACA+TGG - chr2_2:2878694-2878713 Msa0230690:intron 45.0%
TGCCATGTCATCAGCTTCAA+CGG + chr2_2:2878699-2878718 None:intergenic 45.0%
! CAATGCTGAACAAGAGTGTG+AGG - chr2_2:2878739-2878758 Msa0230690:intron 45.0%
TTATAGTTCGGAAGAGGGTG+AGG - chr2_2:2878817-2878836 Msa0230690:intron 45.0%
GGTGAGGAAAAGAATTGGGA+AGG - chr2_2:2878833-2878852 Msa0230690:intron 45.0%
! GAAGAAGGAGGGTTTTCTTC+CGG - chr2_2:2878866-2878885 Msa0230690:intron 45.0%
TTGCCTCTTTCTCACACAAC+CGG + chr2_2:2878888-2878907 None:intergenic 45.0%
GTTGTGTGAGAAAGAGGCAA+AGG - chr2_2:2878888-2878907 Msa0230690:intron 45.0%
TTACGTGTCAGATTTGGAGG+AGG - chr2_2:2878940-2878959 Msa0230690:intron 45.0%
GAAACGTGGTAGGAAGAAGA+AGG - chr2_2:2878979-2878998 Msa0230690:intron 45.0%
TGATGAAGCTGAACAAGAGG+AGG - chr2_2:2879027-2879046 Msa0230690:intron 45.0%
AAGACAGAGCAGAAGAAACC+TGG - chr2_2:2879058-2879077 Msa0230690:intron 45.0%
TGACGAAGATGAACAAGAGG+GGG - chr2_2:2879117-2879136 Msa0230690:intron 45.0%
GATGAACAAGAGGGGGAAAA+TGG - chr2_2:2879124-2879143 Msa0230690:intron 45.0%
TCAGAGAAATGACAAGGGCA+GGG - chr2_2:2879472-2879491 Msa0230690:intron 45.0%
GTATCCTCACTTGAAAGAGG+AGG - chr2_2:2879868-2879887 Msa0230690:CDS 45.0%
! ACTTCCTCCTCTTTCAAGTG+AGG + chr2_2:2879875-2879894 None:intergenic 45.0%
TTGCAATTACCACAGCACAC+TGG + chr2_2:2879911-2879930 None:intergenic 45.0%
! GTGATCATCTGGTTCACTAC+AGG - chr2_2:2880027-2880046 Msa0230690:intron 45.0%
CTCGAACTCATGGTTGTTGT+TGG + chr2_2:2880074-2880093 None:intergenic 45.0%
!!! CTTTTGGGACGAACATTGCA+GGG - chr2_2:2880411-2880430 Msa0230690:intron 45.0%
! ATAAGCGTGTGTACTGGTAG+GGG - chr2_2:2880480-2880499 Msa0230690:intron 45.0%
TGTTGTTGTGAGCTTCGTTG+TGG - chr2_2:2880658-2880677 Msa0230690:intron 45.0%
GTTGTTGTGAGCTTCGTTGT+GGG - chr2_2:2880659-2880678 Msa0230690:intron 45.0%
CATGAAGATAATCACGGCCT+TGG + chr2_2:2880729-2880748 None:intergenic 45.0%
CAAGGCCGTGATTATCTTCA+TGG - chr2_2:2880727-2880746 Msa0230690:intron 45.0%
CTTGACCACTCACAAATCTC+AGG + chr2_2:2880802-2880821 None:intergenic 45.0%
!!! TCATCATCGGCTTTTGGACA+GGG + chr2_2:2880859-2880878 None:intergenic 45.0%
!!! ATCATCATCGGCTTTTGGAC+AGG + chr2_2:2880860-2880879 None:intergenic 45.0%
!!! CCACAATCATCATCGGCTTT+TGG + chr2_2:2880865-2880884 None:intergenic 45.0%
CCAAAAGCCGATGATGATTG+TGG - chr2_2:2880862-2880881 Msa0230690:intron 45.0%
GAAGTATGCTTCTCAGTTCG+AGG + chr2_2:2880897-2880916 None:intergenic 45.0%
GTTGTCACTGGAATCTTCAC+GGG + chr2_2:2881076-2881095 None:intergenic 45.0%
! TTTCAATGGCACTGGAGCAA+AGG - chr2_2:2881147-2881166 Msa0230690:intron 45.0%
! TTCAATGGCACTGGAGCAAA+GGG - chr2_2:2881148-2881167 Msa0230690:intron 45.0%
ACTGTCCGCCAAAAAACTGT+TGG + chr2_2:2881654-2881673 None:intergenic 45.0%
TTTCTAGATGGTCTGCTGTC+TGG - chr2_2:2881690-2881709 Msa0230690:intron 45.0%
TTCTAGATGGTCTGCTGTCT+GGG - chr2_2:2881691-2881710 Msa0230690:intron 45.0%
GAGGCCAATTAAGCCAATCT+GGG + chr2_2:2882394-2882413 None:intergenic 45.0%
TGAGGCCAATTAAGCCAATC+TGG + chr2_2:2882395-2882414 None:intergenic 45.0%
!! AGATTGGCTTAATTGGCCTC+AGG - chr2_2:2882394-2882413 Msa0230690:CDS 45.0%
ATGAACTCAGCACAATGACG+AGG + chr2_2:2882470-2882489 None:intergenic 45.0%
TTTCAGGCAACTTCACAGCA+AGG + chr2_2:2882544-2882563 None:intergenic 45.0%
!!! TATGTTTTTGGGCCCATGTC+TGG + chr2_2:2882578-2882597 None:intergenic 45.0%
! TATGGATTTGCTCAGGAGCT+TGG - chr2_2:2882605-2882624 Msa0230690:intron 45.0%
CCGCATCAGACATATTACAG+TGG + chr2_2:2882655-2882674 None:intergenic 45.0%
! TTGGAAGGTGCAGAGTTTCT+AGG - chr2_2:2882778-2882797 Msa0230690:intron 45.0%
!! GTCTTGCTCAAGGTGCTTTT+GGG + chr2_2:2883166-2883185 None:intergenic 45.0%
!! TGTCTTGCTCAAGGTGCTTT+TGG + chr2_2:2883167-2883186 None:intergenic 45.0%
!! CTGGGATATTTTTCGGAGAG+AGG - chr2_2:2883329-2883348 Msa0230690:intron 45.0%
GAGAGAGGATGTACCTGAAT+TGG - chr2_2:2883344-2883363 Msa0230690:intron 45.0%
AGAGGATGTACCTGAATTGG+AGG - chr2_2:2883347-2883366 Msa0230690:intron 45.0%
!! CCTGCTTTAAAGGAGAGCAA+TGG + chr2_2:2883410-2883429 None:intergenic 45.0%
!! CCATTGCTCTCCTTTAAAGC+AGG - chr2_2:2883407-2883426 Msa0230690:intron 45.0%
GTCGGCTACATGGAAAACAA+AGG + chr2_2:2883443-2883462 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr2_2:2883465-2883484 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr2_2:2883466-2883485 None:intergenic 45.0%
! TCCCCATTTGGGTTCTTAAG+TGG - chr2_2:2883580-2883599 Msa0230690:intron 45.0%
CCCACTTAAGAACCCAAATG+GGG + chr2_2:2883584-2883603 None:intergenic 45.0%
! CCCCATTTGGGTTCTTAAGT+GGG - chr2_2:2883581-2883600 Msa0230690:intron 45.0%
GACCCACTTAAGAACCCAAA+TGG + chr2_2:2883586-2883605 None:intergenic 45.0%
!! TTTATTTCGAGGTGCTGGGT+TGG + chr2_2:2883679-2883698 None:intergenic 45.0%
GCACCTCTTTAGCTGATTAC+TGG + chr2_2:2883941-2883960 None:intergenic 45.0%
AGTTTGTGCATGTTGTGGGA+GGG + chr2_2:2884040-2884059 None:intergenic 45.0%
AGAACCTGAGTTCGATTCCT+GGG - chr2_2:2884124-2884143 Msa0230690:intron 45.0%
TTCCTGGGTGGAGTAATTGT+TGG - chr2_2:2884139-2884158 Msa0230690:intron 45.0%
TACCAACAATTACTCCACCC+AGG + chr2_2:2884144-2884163 None:intergenic 45.0%
CCCCCTACTAATATGGAGTT+TGG + chr2_2:2884187-2884206 None:intergenic 45.0%
TGTTAACCCTCAGGTTCCTA+GGG + chr2_2:2884216-2884235 None:intergenic 45.0%
TGAAGCATGGATAATGCAGG+TGG + chr2_2:2884277-2884296 None:intergenic 45.0%
TTATCCATGCTTCAGATGCC+TGG - chr2_2:2884283-2884302 Msa0230690:CDS 45.0%
! CCCTACAAAACCGACTCATA+AGG + chr2_2:2884394-2884413 None:intergenic 45.0%
! ACATCTAGAGCGTGGACAAA+TGG + chr2_2:2884503-2884522 None:intergenic 45.0%
! ATGAATGCACATCTAGAGCG+TGG + chr2_2:2884511-2884530 None:intergenic 45.0%
GATGTGCATTCATGTTCGTG+AGG - chr2_2:2884518-2884537 Msa0230690:CDS 45.0%
AGGGAAAAACACCTGAAGAG+CGG + chr2_2:2884581-2884600 None:intergenic 45.0%
GAAGGGGCTATTGAATCCTA+AGG + chr2_2:2884802-2884821 None:intergenic 45.0%
TAGGATTCAATAGCCCCTTC+TGG - chr2_2:2884802-2884821 Msa0230690:CDS 45.0%
AGGATTCAATAGCCCCTTCT+GGG - chr2_2:2884803-2884822 Msa0230690:CDS 45.0%
! ACACAATTCTGGGAATCTCC+AGG - chr2_2:2884918-2884937 Msa0230690:CDS 45.0%
! CACAATTCTGGGAATCTCCA+GGG - chr2_2:2884919-2884938 Msa0230690:CDS 45.0%
! CCAAAATGTAAGTTGGGTGG+GGG - chr2_2:2885034-2885053 Msa0230690:intron 45.0%
CCGATTGCTGCTGTATACAA+AGG - chr2_2:2885342-2885361 Msa0230690:intron 45.0%
TGCTGCTGTATACAAAGGAC+TGG - chr2_2:2885347-2885366 Msa0230690:intron 45.0%
! TCTTGATGGACATTAGCCTG+TGG - chr2_2:2885406-2885425 Msa0230690:CDS 45.0%
TAAAAGGTCTGGTCGTGGAT+GGG + chr2_2:2885449-2885468 None:intergenic 45.0%
ATAAAAGGTCTGGTCGTGGA+TGG + chr2_2:2885450-2885469 None:intergenic 45.0%
TCAGATAAAAGGTCTGGTCG+TGG + chr2_2:2885454-2885473 None:intergenic 45.0%
CTCGAGTCAGATAAAAGGTC+TGG + chr2_2:2885460-2885479 None:intergenic 45.0%
! ATCTGACTCGAGAGCATAAG+AGG - chr2_2:2885468-2885487 Msa0230690:CDS 45.0%
!!! ATGTTTTTTGGGAAGTGGGC+TGG - chr2_2:2885534-2885553 Msa0230690:intron 45.0%
TGACAGTCACCATTGCTTGT+AGG - chr2_2:2885605-2885624 Msa0230690:CDS 45.0%
!!! GATGCTGTTTTCATTCCTGC+CGG - chr2_2:2885662-2885681 Msa0230690:intron 45.0%
GTAAGCTTCCGATAAACCAC+AGG - chr2_2:2886185-2886204 Msa0230690:intron 45.0%
! TTGGTGGACCTGTGGTTTAT+CGG + chr2_2:2886196-2886215 None:intergenic 45.0%
TCGTCTTGATTGGGAGCTTT+AGG - chr2_2:2886377-2886396 Msa0230690:CDS 45.0%
TGCAATCATGTGTTGGAGTC+AGG - chr2_2:2886829-2886848 Msa0230690:CDS 45.0%
! CATGTGTTGGAGTCAGGTTT+TGG - chr2_2:2886835-2886854 Msa0230690:CDS 45.0%
CCAATAAGCAACTGCTGACA+CGG + chr2_2:2887062-2887081 None:intergenic 45.0%
CGTGTCAGCAGTTGCTTATT+GGG - chr2_2:2887060-2887079 Msa0230690:CDS 45.0%
TTGCAAACTTCCTCTCCCTT+TGG - chr2_2:2887196-2887215 Msa0230690:five_prime_UTR 45.0%
!! TGTTTAAAAAATATTATTAT+TGG - chr2_2:2879654-2879673 Msa0230690:intron 5.0%
!!! ATTTTATTTTAATTCATTTA+CGG - chr2_2:2881439-2881458 Msa0230690:intron 5.0%
!! TTAATTATATAAAAATTGAT+TGG - chr2_2:2886577-2886596 Msa0230690:CDS 5.0%
CAAAGTCACACTCACCGTTC+CGG - chr2_2:2878418-2878437 Msa0230690:intron 50.0%
! GGAATGGATTCATCTGGGTC+CGG + chr2_2:2878440-2878459 None:intergenic 50.0%
GATGACGTGGCACAAGCTAT+CGG - chr2_2:2878527-2878546 Msa0230690:intron 50.0%
! CAACGATGAAGGTGATGACG+TGG - chr2_2:2878577-2878596 Msa0230690:intron 50.0%
!! AACGGTGGTGTTGTTGTCGA+CGG - chr2_2:2878661-2878680 Msa0230690:intron 50.0%
TTGTTGTCGACGGACGATGA+AGG - chr2_2:2878671-2878690 Msa0230690:intron 50.0%
AGCTGATGACATGGCAGCTA+AGG - chr2_2:2878703-2878722 Msa0230690:intron 50.0%
CTTCCGGTTGTGTGAGAAAG+AGG - chr2_2:2878882-2878901 Msa0230690:intron 50.0%
TGAGAAAGAGGCAAAGGCCT+AGG - chr2_2:2878894-2878913 Msa0230690:intron 50.0%
TGAAGCTGAACAAGAGGAGG+AGG - chr2_2:2879030-2879049 Msa0230690:intron 50.0%
GTCAGAGAAATGACAAGGGC+AGG - chr2_2:2879471-2879490 Msa0230690:intron 50.0%
GAAAGAGGAGGAAGTTGCTG+AGG - chr2_2:2879880-2879899 Msa0230690:CDS 50.0%
ACTTGGAGAGCTCGAACTCA+TGG + chr2_2:2880084-2880103 None:intergenic 50.0%
! GTTGCTTTGCCCATGCTTCA+TGG - chr2_2:2880265-2880284 Msa0230690:intron 50.0%
!!! GCTTTTGGGACGAACATTGC+AGG - chr2_2:2880410-2880429 Msa0230690:intron 50.0%
CTTCGTTGTGGGAAGCTTCT+AGG - chr2_2:2880670-2880689 Msa0230690:intron 50.0%
GGCCGTGATTATCTTCATGG+TGG - chr2_2:2880730-2880749 Msa0230690:intron 50.0%
CCACTCACAAATCTCAGGCT+GGG + chr2_2:2880797-2880816 None:intergenic 50.0%
ACCACTCACAAATCTCAGGC+TGG + chr2_2:2880798-2880817 None:intergenic 50.0%
GCCGATGATGATTGTGGTCA+TGG - chr2_2:2880868-2880887 Msa0230690:intron 50.0%
! TCAATGGCACTGGAGCAAAG+GGG - chr2_2:2881149-2881168 Msa0230690:intron 50.0%
AATGCACGCCACATGACAAG+CGG + chr2_2:2881228-2881247 None:intergenic 50.0%
ACACAAATGGTCGCCCAGAT+TGG - chr2_2:2882378-2882397 Msa0230690:CDS 50.0%
!! GTCGCCCAGATTGGCTTAAT+TGG - chr2_2:2882387-2882406 Msa0230690:CDS 50.0%
AGCACCTTGAGCAAGACAAG+AGG - chr2_2:2883169-2883188 Msa0230690:CDS 50.0%
GCACCTTGAGCAAGACAAGA+GGG - chr2_2:2883170-2883189 Msa0230690:CDS 50.0%
CAAGACAAGAGGGAGCTACA+TGG - chr2_2:2883180-2883199 Msa0230690:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr2_2:2883461-2883480 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr2_2:2883467-2883486 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr2_2:2883464-2883483 Msa0230690:intron 50.0%
CAGTTTGTGCATGTTGTGGG+AGG + chr2_2:2884041-2884060 None:intergenic 50.0%
GAGAACCTGAGTTCGATTCC+TGG - chr2_2:2884123-2884142 Msa0230690:intron 50.0%
GTTAACCCTCAGGTTCCTAG+GGG + chr2_2:2884215-2884234 None:intergenic 50.0%
GTGTTAACCCTCAGGTTCCT+AGG + chr2_2:2884217-2884236 None:intergenic 50.0%
GACATACCACTAGTCGACGT+GGG + chr2_2:2884338-2884357 None:intergenic 50.0%
AGACATACCACTAGTCGACG+TGG + chr2_2:2884339-2884358 None:intergenic 50.0%
!! CGGTTTTGTAGGGTCGAGTT+AGG - chr2_2:2884401-2884420 Msa0230690:CDS 50.0%
AGAGCGTGGACAAATGGAAG+TGG + chr2_2:2884497-2884516 None:intergenic 50.0%
! GTGTTTTTCCCTGAGCGTGA+GGG - chr2_2:2884589-2884608 Msa0230690:CDS 50.0%
! TCCCACATCGACTAGAGATC+TGG - chr2_2:2884625-2884644 Msa0230690:CDS 50.0%
GCCAGATCTCTAGTCGATGT+GGG + chr2_2:2884629-2884648 None:intergenic 50.0%
! CTCTCATAGTTCTGTTGCCC+TGG + chr2_2:2884939-2884958 None:intergenic 50.0%
! CCCCCACCCAACTTACATTT+TGG + chr2_2:2885037-2885056 None:intergenic 50.0%
GGCTCGATTCCTACAAGCAA+TGG + chr2_2:2885617-2885636 None:intergenic 50.0%
TGCTTGTAGGAATCGAGCCT+TGG - chr2_2:2885618-2885637 Msa0230690:CDS 50.0%
!! TCTGACTTGGTGAGGACAAC+CGG + chr2_2:2885684-2885703 None:intergenic 50.0%
TGAGTGCTTCCGTTTGACTG+AGG - chr2_2:2886156-2886175 Msa0230690:intron 50.0%
GATAAACCACAGGTCCACCA+AGG - chr2_2:2886195-2886214 Msa0230690:intron 50.0%
!! GTGTTGGAGTCAGGTTTTGG+AGG - chr2_2:2886838-2886857 Msa0230690:CDS 50.0%
!!! TGGAGTCAGGTTTTGGAGGA+TGG - chr2_2:2886842-2886861 Msa0230690:CDS 50.0%
TTAAGCACTAGACCAGCGAC+TGG - chr2_2:2886954-2886973 Msa0230690:CDS 50.0%
CCGTGTCAGCAGTTGCTTAT+TGG - chr2_2:2887059-2887078 Msa0230690:CDS 50.0%
GGATTCATCTGGGTCCGGAA+CGG + chr2_2:2878435-2878454 None:intergenic 55.0%
ACCTACTGCCAATGTTGGCG+CGG - chr2_2:2878484-2878503 Msa0230690:intron 55.0%
TGCCAATGTTGGCGCGGAAA+CGG - chr2_2:2878490-2878509 Msa0230690:intron 55.0%
TACCGTTTCCGCGCCAACAT+TGG + chr2_2:2878495-2878514 None:intergenic 55.0%
GCGGAAACGGTACCGTTGAA+GGG - chr2_2:2878503-2878522 Msa0230690:intron 55.0%
! ACCGTTGAAGGGTGATGACG+TGG - chr2_2:2878514-2878533 Msa0230690:intron 55.0%
GCCACGTCATCACCCTTCAA+CGG + chr2_2:2878518-2878537 None:intergenic 55.0%
! CGATGAAGGTGATGACGTGG+TGG - chr2_2:2878580-2878599 Msa0230690:intron 55.0%
GGATGTTGGCGCAAAAACGG+TGG - chr2_2:2878646-2878665 Msa0230690:intron 55.0%
!! GAATTGGGAAGGTGCTGACG+TGG - chr2_2:2878844-2878863 Msa0230690:intron 55.0%
!! GAAGGTGCTGACGTGGAAGA+AGG - chr2_2:2878851-2878870 Msa0230690:intron 55.0%
! GTGCTGACGTGGAAGAAGGA+GGG - chr2_2:2878855-2878874 Msa0230690:intron 55.0%
CGTTGTGGGAAGCTTCTAGG+TGG - chr2_2:2880673-2880692 Msa0230690:intron 55.0%
CCCAGCCTGAGATTTGTGAG+TGG - chr2_2:2880794-2880813 Msa0230690:intron 55.0%
GTGAGTGGTCAAGATTCGGG+TGG - chr2_2:2880809-2880828 Msa0230690:intron 55.0%
GGGTGGCATGCAGATAGTGA+TGG - chr2_2:2880826-2880845 Msa0230690:intron 55.0%
CTTCTTGCCCTTGCATCCTC+TGG - chr2_2:2881962-2881981 Msa0230690:intron 55.0%
TTTGCTCAGGAGCTTGGACG+TGG - chr2_2:2882611-2882630 Msa0230690:intron 55.0%
GCTCCCTCTTGTCTTGCTCA+AGG + chr2_2:2883176-2883195 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr2_2:2883453-2883472 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr2_2:2883452-2883471 Msa0230690:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr2_2:2883453-2883472 Msa0230690:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr2_2:2883459-2883478 Msa0230690:intron 55.0%
!! ATTTCGAGGTGCTGGGTTGG+AGG + chr2_2:2883676-2883695 None:intergenic 55.0%
TGTGCATGTTGTGGGAGGGA+GGG + chr2_2:2884036-2884055 None:intergenic 55.0%
TTGTGCATGTTGTGGGAGGG+AGG + chr2_2:2884037-2884056 None:intergenic 55.0%
ACCTGAGTTCGATTCCTGGG+TGG - chr2_2:2884127-2884146 Msa0230690:intron 55.0%
TCCACCCAGGAATCGAACTC+AGG + chr2_2:2884131-2884150 None:intergenic 55.0%
GGAAGGGCCCCCTACTAATA+TGG + chr2_2:2884194-2884213 None:intergenic 55.0%
! AGGACCAGGCATCTGAAGCA+TGG + chr2_2:2884290-2884309 None:intergenic 55.0%
ATGCCTGGTCCTCAGCATGA+TGG - chr2_2:2884298-2884317 Msa0230690:CDS 55.0%
TGCCTGGTCCTCAGCATGAT+GGG - chr2_2:2884299-2884318 Msa0230690:CDS 55.0%
CAACCAACCCCATCATGCTG+AGG + chr2_2:2884310-2884329 None:intergenic 55.0%
! GGTGTTTTTCCCTGAGCGTG+AGG - chr2_2:2884588-2884607 Msa0230690:CDS 55.0%
AACACTCTCCCTCACGCTCA+GGG + chr2_2:2884600-2884619 None:intergenic 55.0%
TAACACTCTCCCTCACGCTC+AGG + chr2_2:2884601-2884620 None:intergenic 55.0%
GGCCAGATCTCTAGTCGATG+TGG + chr2_2:2884630-2884649 None:intergenic 55.0%
! TCGTAGTTCTGTTGCCCTGG+AGG + chr2_2:2884831-2884850 None:intergenic 55.0%
! CTCTCGTAGTTCTGTTGCCC+TGG + chr2_2:2884834-2884853 None:intergenic 55.0%
ACAGACCTCCAACCTGTCCT+TGG + chr2_2:2886215-2886234 None:intergenic 55.0%
TCCGCGCCAACATTGGCAGT+AGG + chr2_2:2878488-2878507 None:intergenic 60.0%
CGCGGAAACGGTACCGTTGA+AGG - chr2_2:2878502-2878521 Msa0230690:intron 60.0%
!! GGTGCTGACGTGGAAGAAGG+AGG - chr2_2:2878854-2878873 Msa0230690:intron 60.0%
GAGGCATGTCCAGTGTGCTG+TGG - chr2_2:2879899-2879918 Msa0230690:CDS 60.0%
TCAGGCTGGGCAGCAGAATG+AGG + chr2_2:2880784-2880803 None:intergenic 60.0%
GCTGGGAACCGCTTGTCATG+TGG - chr2_2:2881217-2881236 Msa0230690:intron 60.0%
CCCTCAGGTTCCTAGGGGAA+GGG + chr2_2:2884210-2884229 None:intergenic 60.0%
CCCTTCCCCTAGGAACCTGA+GGG - chr2_2:2884207-2884226 Msa0230690:intron 60.0%
ACCCTCAGGTTCCTAGGGGA+AGG + chr2_2:2884211-2884230 None:intergenic 60.0%
GCCTGGTCCTCAGCATGATG+GGG - chr2_2:2884300-2884319 Msa0230690:CDS 60.0%
ACCCCATCATGCTGAGGACC+AGG + chr2_2:2884304-2884323 None:intergenic 60.0%
! GGTCCTCAGCATGATGGGGT+TGG - chr2_2:2884304-2884323 Msa0230690:CDS 60.0%
! GAGAGTCCCACGTCGACTAG+TGG - chr2_2:2884329-2884348 Msa0230690:CDS 60.0%
TGCCCTGGAGGTTCCCAGAA+GGG + chr2_2:2884819-2884838 None:intergenic 60.0%
TTGCCCTGGAGGTTCCCAGA+AGG + chr2_2:2884820-2884839 None:intergenic 60.0%
! ACTTGGTGAGGACAACCGGC+AGG + chr2_2:2885680-2885699 None:intergenic 60.0%
ACCACAGGTCCACCAAGGAC+AGG - chr2_2:2886200-2886219 Msa0230690:intron 60.0%
! ACCTGTCCTTGGTGGACCTG+TGG + chr2_2:2886204-2886223 None:intergenic 60.0%
CAGGTCCACCAAGGACAGGT+TGG - chr2_2:2886204-2886223 Msa0230690:intron 60.0%
! GTCCACCAAGGACAGGTTGG+AGG - chr2_2:2886207-2886226 Msa0230690:intron 60.0%
GACCTCCAACCTGTCCTTGG+TGG + chr2_2:2886212-2886231 None:intergenic 60.0%
TAGTAGGGGGCCCTTCCCCT+AGG - chr2_2:2884197-2884216 Msa0230690:intron 65.0%
GCCCTTCCCCTAGGAACCTG+AGG - chr2_2:2884206-2884225 Msa0230690:intron 65.0%
! AGCCCCTTCTGGGAACCTCC+AGG - chr2_2:2884813-2884832 Msa0230690:CDS 65.0%
! GCCCCTTCTGGGAACCTCCA+GGG - chr2_2:2884814-2884833 Msa0230690:CDS 65.0%
GCCCTGGAGGTTCCCAGAAG+GGG + chr2_2:2884818-2884837 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 2878315 2887224 2878315 ID=Msa0230690;Name=Msa0230690
chr2_2 mRNA 2878315 2887224 2878315 ID=Msa0230690-mRNA-1;Parent=Msa0230690;Name=Msa0230690-mRNA-1;_AED=0.29;_eAED=0.30;_QI=56|0.9|0.81|1|1|1|11|0|1025
chr2_2 exon 2878315 2878410 2878315 ID=Msa0230690-mRNA-1:exon:1064;Parent=Msa0230690-mRNA-1
chr2_2 exon 2879311 2879430 2879311 ID=Msa0230690-mRNA-1:exon:1063;Parent=Msa0230690-mRNA-1
chr2_2 exon 2879827 2879928 2879827 ID=Msa0230690-mRNA-1:exon:1062;Parent=Msa0230690-mRNA-1
chr2_2 exon 2882111 2882446 2882111 ID=Msa0230690-mRNA-1:exon:1061;Parent=Msa0230690-mRNA-1
chr2_2 exon 2882866 2883195 2882866 ID=Msa0230690-mRNA-1:exon:1060;Parent=Msa0230690-mRNA-1
chr2_2 exon 2884219 2884954 2884219 ID=Msa0230690-mRNA-1:exon:1059;Parent=Msa0230690-mRNA-1
chr2_2 exon 2885044 2885107 2885044 ID=Msa0230690-mRNA-1:exon:1058;Parent=Msa0230690-mRNA-1
chr2_2 exon 2885352 2885490 2885352 ID=Msa0230690-mRNA-1:exon:1057;Parent=Msa0230690-mRNA-1
chr2_2 exon 2885572 2885671 2885572 ID=Msa0230690-mRNA-1:exon:1056;Parent=Msa0230690-mRNA-1
chr2_2 exon 2885987 2886102 2885987 ID=Msa0230690-mRNA-1:exon:1055;Parent=Msa0230690-mRNA-1
chr2_2 exon 2886230 2887224 2886230 ID=Msa0230690-mRNA-1:exon:1054;Parent=Msa0230690-mRNA-1
chr2_2 five_prime_UTR 2887169 2887224 2887169 ID=Msa0230690-mRNA-1:five_prime_utr;Parent=Msa0230690-mRNA-1
chr2_2 CDS 2886230 2887168 2886230 ID=Msa0230690-mRNA-1:cds;Parent=Msa0230690-mRNA-1
chr2_2 CDS 2885987 2886102 2885987 ID=Msa0230690-mRNA-1:cds;Parent=Msa0230690-mRNA-1
chr2_2 CDS 2885572 2885671 2885572 ID=Msa0230690-mRNA-1:cds;Parent=Msa0230690-mRNA-1
chr2_2 CDS 2885352 2885490 2885352 ID=Msa0230690-mRNA-1:cds;Parent=Msa0230690-mRNA-1
chr2_2 CDS 2885044 2885107 2885044 ID=Msa0230690-mRNA-1:cds;Parent=Msa0230690-mRNA-1
chr2_2 CDS 2884219 2884954 2884219 ID=Msa0230690-mRNA-1:cds;Parent=Msa0230690-mRNA-1
chr2_2 CDS 2882866 2883195 2882866 ID=Msa0230690-mRNA-1:cds;Parent=Msa0230690-mRNA-1
chr2_2 CDS 2882111 2882446 2882111 ID=Msa0230690-mRNA-1:cds;Parent=Msa0230690-mRNA-1
chr2_2 CDS 2879827 2879928 2879827 ID=Msa0230690-mRNA-1:cds;Parent=Msa0230690-mRNA-1
chr2_2 CDS 2879311 2879430 2879311 ID=Msa0230690-mRNA-1:cds;Parent=Msa0230690-mRNA-1
chr2_2 CDS 2878315 2878410 2878315 ID=Msa0230690-mRNA-1:cds;Parent=Msa0230690-mRNA-1
Gene Sequence

>Msa0230690

ATGGCGGAGGAAGAGAACAACCACACAGTCACATATACAGTGAAAATCAAAGTCACACTCACCGTTCCGGACCCAGATGAATCCATTCCTGATCATGATCGTCGAGAAACACAACCTACTGCCAATGTTGGCGCGGAAACGGTACCGTTGAAGGGTGATGACGTGGCACAAGCTATCGGTGTTAGAGCTGAAACGGCGTTGTTGAACAACGATGAAGGTGATGACGTGGTGGAAGCAGCTGAAGAATCTATTCCTGATCGAGAAAAACAAGATATGGATGTTGGCGCAAAAACGGTGGTGTTGTTGTCGACGGACGATGAAGGTTCCGTTGAAGCTGATGACATGGCAGCTAAGGATTCTGATGAAAACAATGCTGAACAAGAGTGTGAGGAAAAAAAAGTCATTAAAGAGAAGAAGAGAGCTGGTAGAAAAAGAAAAAAGACAGTTTATAGTTCGGAAGAGGGTGAGGAAAAGAATTGGGAAGGTGCTGACGTGGAAGAAGGAGGGTTTTCTTCCGGTTGTGTGAGAAAGAGGCAAAGGCCTAGGAAGATTAAATCGTTGAAGGAAGATTACGTGTCAGATTTGGAGGAGGATATGAAGAAAAAGTGGAAACGTGGTAGGAAGAAGAAGGTCATAATTGAGGTTTCTGATGAGAATGATGAAGCTGAACAAGAGGAGGAGGATGTGAAGACAGAGCAGAAGAAACCTGGTAGAAAAAGGAAAGTAGGTTATGGTTCTGAAGAAAATGACGAAGATGAACAAGAGGGGGAAAATGGTAAAAATTTTAAGATTGTTGAGAATGAATTGATCAGTGAAAAGAATTTGGAGAGTGATGTTTTATCAGATGATAATAAAGGTTATTCTTTAAGGACTGATAGAAAAGTGAAAGTTAAAAGCATTGAACAGCCGAAGCAAAAAATAAACAAACGGAATCCAAAGTGGATTGAAGAGGAGTCCTTAATGTGCCATCAATGTCAGAGAAATGACAAGGGCAGGGTTGTGAGATGCACAAAATGCAAACGGAAAAGATTTTGCATACCTTGTTTAAACAATTGGTATCCTCACTTGAAAGAGGAGGAAGTTGCTGAGGCATGTCCAGTGTGCTGTGGTAATTGCAATTGCAAAGCATGCTTGCGATCATGTGCACTTATCAAAGAAATTAAAATGAAGACAGAAACCAACAACAACCATGAGTTCGAGCTCTCCAAGTATATGCTGAAAGAACTTCTTCCATATTTAAGACGATTGGATGAAGAACAAATGGTCGAGAAGGAGATAGAAGCAAAGAGAAAAGGGCTCTCACATTCTAAGCTAAAAGTAAAAGCCGCAGATTACCCTAAAAATAAGCGTGTGTACTGTGACAACTGCAAAACGTCAATATTTGACTACCACAGAAGCTGTACAAAATGCTCTTTTAACATTTGTCTTCTTTGTTGTTGTGAGCTTCGTTGTGGGAAGCTTCTAGGTGGTACAGATCCAATTGAGTTTGAGTTTATCTTCCAAGGCCGTGATTATCTTCATGGTGGAAAAGAAGAGAGGGTAAAAAAAAATAAACCTCATTCTGCTGCCCAGCCTGAGATTTGTGAGTGGTCAAGATTCGGGTGGCATGCAGATAGTGATGGTAGCATTCCCTGTCCAAAAGCCGATGATGATTGTGGTCATGGTTTCCTCGAACTGAGAAGCATACTTCCACCAAATTGCATCTCTGAGTTAGTATGTAAAGCGAAAGAACTCGAAGAAACAATTAGGCTTCAAGATGCAGAGGAGACATTTGATAGTATGTGTTCTTGTTTGAAGCCTGTTAGGAATGCAACTGATATACACAATAACACAAGGAAGGCAGCTTCCCGTGAAGATTCCAGTGACAACTTCTTGTATTCCCCCAGAGCTTTAAATTTACGTCATGAGGATTTAAGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTAATTATCAGCAATGTACTTGAATGTACAACTGGTTTAAGCTGGGAACCGCTTGTCATGTGGCGTGCATTCCGTCAGATAAGAAATACCAAGCACAAAACACTTTTGGATGTGGAGGCAATTGATTGCTTAGATTGGTGTGAGGAAAATATTAATGTGCACCAATTCTTTACTGGGTACACAAATGGTCGCCCAGATTGGCTTAATTGGCCTCAGGTTTTGAAATTGAAAGATTGGCCTCCTTCTAATTTATTTAGGGAAAGTTTGCCTCGTCATTGTGCTGAGTTCATATCTTCCTTGCCGTATAAAGAATATACAGATCCTTTCAAAGGCATTCTTAACCTTGCTGTGAAGTTGCCTGAAAATGTTCTAAAGCCAGACATGGGCCCAAAAACATATATTGCTTATGGATTTGCTCAGGAGCTTGGACGTGGTGATTCTGTGACTAAGCTCCACTGTAATATGTCTGATGCGGTAAATGTGTTGACTCATATTGCTGAAGTGAAATTGAAATCTGAGGGCATTGCTGCCATTAAGAAACTGACCCAAAAGCACCTTGAGCAAGACAAGAGGGAGCTACATGGTGATAATCGAGATGGAGAGACCAACGTTGACATGTTTGATAATTCATCTTCTTCCATAAATGCTTCAGACGAGCAAAATAGTGTTCGAGTTTTGGAAAATAGGGGTGATTCTTTAGATGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCTGAATTGGAGGAATATTTAAAGAAGCATTTCAGAGAGTTTAGGCATGCCCATTGCTCTCCTTTAAAGCAGTCACCATTGCTTGTAGGAATCGAGCCTTGGACTTTTATTCAGAAGCTAGGAGATGCTGTTTTCATTCCTGCCGGTTGTCCTCACCAAGTCAGAAATCTAAAGTCATGCATCAAGGTTGGACTTGATTTTGTCTCACCTGAAAATGTTGGTGAGTGCTTCCGTTTGACTGAGGAATTCCGTAAGCTTCCGATAAACCACAGGTCCACCAAGGACAGGTTGGAGGTGAAGAAAATGACTATATATGCTATGCTTGATGTGGTTAACAAATTGGAGAAAACAAGGTTACTGATTGCAAACTTCCTCTCCCTTTGGTTATGA
Protein sequence

>Msa0230690

MAEEENNHTVTYTVKIKVTLTVPDPDESIPDHDRRETQPTANVGAETVPLKGDDVAQAIGVRAETALLNNDEGDDVVEAAEESIPDREKQDMDVGAKTVVLLSTDDEGSVEADDMAAKDSDENNAEQECEEKKVIKEKKRAGRKRKKTVYSSEEGEEKNWEGADVEEGGFSSGCVRKRQRPRKIKSLKEDYVSDLEEDMKKKWKRGRKKKVIIEVSDENDEAEQEEEDVKTEQKKPGRKRKVGYGSEENDEDEQEGENGKNFKIVENELISEKNLESDVLSDDNKGYSLRTDRKVKVKSIEQPKQKINKRNPKWIEEESLMCHQCQRNDKGRVVRCTKCKRKRFCIPCLNNWYPHLKEEEVAEACPVCCGNCNCKACLRSCALIKEIKMKTETNNNHEFELSKYMLKELLPYLRRLDEEQMVEKEIEAKRKGLSHSKLKVKAADYPKNKRVYCDNCKTSIFDYHRSCTKCSFNICLLCCCELRCGKLLGGTDPIEFEFIFQGRDYLHGGKEERVKKNKPHSAAQPEICEWSRFGWHADSDGSIPCPKADDDCGHGFLELRSILPPNCISELVCKAKELEETIRLQDAEETFDSMCSCLKPVRNATDIHNNTRKAASREDSSDNFLYSPRALNLRHEDLRHFQWHWSKGEPVIISNVLECTTGLSWEPLVMWRAFRQIRNTKHKTLLDVEAIDCLDWCEENINVHQFFTGYTNGRPDWLNWPQVLKLKDWPPSNLFRESLPRHCAEFISSLPYKEYTDPFKGILNLAVKLPENVLKPDMGPKTYIAYGFAQELGRGDSVTKLHCNMSDAVNVLTHIAEVKLKSEGIAAIKKLTQKHLEQDKRELHGDNRDGETNVDMFDNSSSSINASDEQNSVRVLENRGDSLDGALWDIFRREDVPELEEYLKKHFREFRHAHCSPLKQSPLLVGIEPWTFIQKLGDAVFIPAGCPHQVRNLKSCIKVGLDFVSPENVGECFRLTEEFRKLPINHRSTKDRLEVKKMTIYAMLDVVNKLEKTRLLIANFLSLWL*