Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0045130 | sp|Q9SZN1|VATB2_ARATH | 93.976 | 415 | 18 | 2 | 9 | 417 | 19 | 432 | 0.0 | 783 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045110 | Msa0045130 | 0.911275 | 7.314111e-83 | -8.615850e-47 |
| Msa0045130 | Msa0045170 | 0.910883 | 1.137284e-82 | -8.615850e-47 |
| Msa0045130 | Msa0045360 | 0.911635 | 4.864955e-83 | -8.615850e-47 |
| Msa0045130 | Msa0045390 | 0.917887 | 3.068265e-86 | -8.615850e-47 |
| Msa0045130 | Msa0045410 | 0.952896 | 8.977230e-111 | -8.615850e-47 |
| Msa0045130 | Msa1085020 | 0.872190 | 3.847025e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0045130 | MtrunA17_Chr1g0211291 | 95.181 | 415 | 14 | 1 | 9 | 417 | 20 | 434 | 0.0 | 798 |
| Msa0045130 | MtrunA17_Chr7g0250051 | 94.699 | 415 | 15 | 2 | 9 | 417 | 19 | 432 | 0.0 | 790 |
| Msa0045130 | MtrunA17_Chr4g0015651 | 30.033 | 303 | 186 | 6 | 73 | 367 | 87 | 371 | 3.83e-27 | 113 |
| Msa0045130 | MtrunA17_Chr4g0016741 | 30.033 | 303 | 186 | 6 | 73 | 367 | 87 | 371 | 3.83e-27 | 113 |
| Msa0045130 | MtrunA17_CPg0492941 | 30.033 | 303 | 186 | 6 | 73 | 367 | 87 | 371 | 3.83e-27 | 113 |
| Msa0045130 | MtrunA17_Chr1g0208751 | 26.425 | 386 | 234 | 9 | 39 | 410 | 128 | 477 | 1.25e-23 | 103 |
| Msa0045130 | MtrunA17_Chr3g0090971 | 28.219 | 365 | 220 | 9 | 78 | 422 | 94 | 436 | 4.24e-23 | 101 |
| Msa0045130 | MtrunA17_Chr4g0016371 | 27.901 | 362 | 225 | 8 | 78 | 422 | 55 | 397 | 4.77e-23 | 101 |
| Msa0045130 | MtrunA17_CPg0493401 | 27.901 | 362 | 225 | 8 | 78 | 422 | 94 | 436 | 6.45e-23 | 100 |
| Msa0045130 | MtrunA17_Chr1g0208761 | 26.801 | 347 | 218 | 7 | 78 | 410 | 156 | 480 | 1.48e-22 | 100 |
| Msa0045130 | MtrunA17_Chr7g0229391 | 27.624 | 362 | 226 | 9 | 78 | 422 | 94 | 436 | 3.90e-22 | 98.6 |
| Msa0045130 | MtrunA17_MTg0490471 | 25.740 | 338 | 231 | 6 | 46 | 374 | 62 | 388 | 2.65e-21 | 96.3 |
| Msa0045130 | MtrunA17_Chr4g0000341 | 32.704 | 159 | 101 | 2 | 209 | 362 | 303 | 460 | 2.62e-18 | 87.4 |
| Msa0045130 | MtrunA17_Chr2g0278821 | 29.375 | 160 | 105 | 3 | 227 | 384 | 11 | 164 | 2.38e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0045130 | AT4G38510.5 | 93.976 | 415 | 18 | 2 | 9 | 417 | 26 | 439 | 0.0 | 784 |
| Msa0045130 | AT4G38510.1 | 93.976 | 415 | 18 | 2 | 9 | 417 | 19 | 432 | 0.0 | 783 |
| Msa0045130 | AT4G38510.3 | 93.976 | 415 | 18 | 2 | 9 | 417 | 19 | 432 | 0.0 | 783 |
| Msa0045130 | AT4G38510.4 | 93.976 | 415 | 18 | 2 | 9 | 417 | 19 | 432 | 0.0 | 783 |
| Msa0045130 | AT4G38510.2 | 93.976 | 415 | 18 | 2 | 9 | 417 | 19 | 432 | 0.0 | 783 |
| Msa0045130 | AT1G20260.1 | 92.530 | 415 | 25 | 1 | 9 | 417 | 18 | 432 | 0.0 | 778 |
| Msa0045130 | AT1G76030.1 | 93.253 | 415 | 21 | 2 | 9 | 417 | 18 | 431 | 0.0 | 776 |
| Msa0045130 | ATCG00120.1 | 29.373 | 303 | 188 | 6 | 73 | 367 | 87 | 371 | 4.77e-27 | 114 |
| Msa0045130 | AT5G08670.1 | 28.022 | 364 | 223 | 9 | 62 | 410 | 138 | 477 | 1.79e-24 | 106 |
| Msa0045130 | AT5G08690.1 | 28.022 | 364 | 223 | 9 | 62 | 410 | 138 | 477 | 1.95e-24 | 106 |
| Msa0045130 | AT5G08680.1 | 28.022 | 364 | 223 | 9 | 62 | 410 | 141 | 480 | 2.03e-24 | 106 |
| Msa0045130 | ATMG01190.1 | 26.888 | 331 | 222 | 6 | 46 | 367 | 62 | 381 | 8.16e-24 | 104 |
| Msa0045130 | AT2G07698.1 | 26.627 | 338 | 228 | 6 | 46 | 374 | 332 | 658 | 2.36e-23 | 103 |
| Msa0045130 | ATCG00480.1 | 27.424 | 361 | 226 | 8 | 79 | 422 | 95 | 436 | 1.48e-22 | 100 |
| Msa0045130 | AT1G78900.1 | 29.524 | 210 | 137 | 4 | 209 | 410 | 302 | 508 | 1.96e-18 | 88.2 |
| Msa0045130 | AT1G78900.2 | 29.524 | 210 | 137 | 4 | 209 | 410 | 302 | 508 | 1.96e-18 | 88.2 |
Find 156 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGACAATCTCTTGATATT+TGG | 0.086118 | 1_1:+76839434 | None:intergenic |
| GCATGGTTAGAATTGGAATT+TGG | 0.112862 | 1_1:+76835824 | None:intergenic |
| ACGGTTGTATCTGGAATTTC+TGG | 0.155234 | 1_1:-76834544 | Msa0045130:three_prime_UTR |
| AATAAAGAGACACATAATTT+AGG | 0.234621 | 1_1:+76839629 | None:intergenic |
| ATCTTGTAATTTAATTATTT+AGG | 0.241526 | 1_1:-76834027 | Msa0045130:three_prime_UTR |
| TATTTAGGATATTTGTAATA+AGG | 0.248801 | 1_1:-76834012 | Msa0045130:three_prime_UTR |
| TCTTACTACTGCTGAATATC+TGG | 0.262357 | 1_1:-76836263 | Msa0045130:CDS |
| ATATTATTAACGGTTGTATC+TGG | 0.266315 | 1_1:-76834553 | Msa0045130:exon |
| TTGACAATCTCTTGATATTT+GGG | 0.268902 | 1_1:+76839435 | None:intergenic |
| TTTACGACCGTACAGTTTAC+TGG | 0.269439 | 1_1:-76839069 | Msa0045130:CDS |
| GGGCGGATATTTAACGGTTC+TGG | 0.291085 | 1_1:-76837953 | Msa0045130:CDS |
| AAGTAAGCCTCGAGTAAAAT+TGG | 0.302617 | 1_1:+76837926 | None:intergenic |
| CATGGTTAGAATTGGAATTT+GGG | 0.316289 | 1_1:+76835825 | None:intergenic |
| CCAGGATAACCACGTCTTCC+TGG | 0.316708 | 1_1:+76835919 | None:intergenic |
| TCACCACTGCAGAGTGCTAT+TGG | 0.329482 | 1_1:-76834910 | Msa0045130:intron |
| TACTTGTGTTGCACACAGTT+TGG | 0.330060 | 1_1:-76834111 | Msa0045130:three_prime_UTR |
| ACATCTACGGGTTCTTCTTT+CGG | 0.330542 | 1_1:+76834177 | None:intergenic |
| TCATTTGGCATGGTTAGAAT+TGG | 0.334129 | 1_1:+76835817 | None:intergenic |
| CACCACTGCAGAGTGCTATT+GGG | 0.340834 | 1_1:-76834909 | Msa0045130:intron |
| CAGGTATTTGAAGGTACATC+TGG | 0.345618 | 1_1:-76839105 | Msa0045130:CDS |
| GAGATTGTCAATATTCGTTT+AGG | 0.348480 | 1_1:-76839423 | Msa0045130:CDS |
| CTGTCCCTCCGTAATATATC+TGG | 0.348917 | 1_1:+76835671 | None:intergenic |
| CTGTGCAGCAATTTCATTAT+GGG | 0.352240 | 1_1:+76837673 | None:intergenic |
| TCTGTGCAGCAATTTCATTA+TGG | 0.352813 | 1_1:+76837672 | None:intergenic |
| ATTACTTCATTACCATCATT+TGG | 0.354095 | 1_1:+76835802 | None:intergenic |
| CAGCATCTCGGCTGTAAAAC+TGG | 0.358949 | 1_1:+76834385 | None:intergenic |
| ATCCATCATAAATATAATAA+AGG | 0.361171 | 1_1:-76834246 | Msa0045130:three_prime_UTR |
| ATGACTGTGTCTGGAGTTAC+CGG | 0.376731 | 1_1:-76839591 | Msa0045130:CDS |
| TGCAGGTGTCGTAGGCTCCC+TGG | 0.382480 | 1_1:+76834496 | None:intergenic |
| TTTGGGATGGTTGGAATTTG+TGG | 0.399858 | 1_1:-76834093 | Msa0045130:three_prime_UTR |
| GAGGCTTACTTGGATATATC+AGG | 0.402927 | 1_1:-76837914 | Msa0045130:intron |
| AGATTACCAAATTAAGGAAA+AGG | 0.411767 | 1_1:+76836911 | None:intergenic |
| GGTCATTCTTGAGAAAGTTA+AGG | 0.412036 | 1_1:-76839562 | Msa0045130:intron |
| AACCTTTATTATATTTATGA+TGG | 0.413732 | 1_1:+76834244 | None:intergenic |
| TGCTGCACAGATTTGTCGTC+AGG | 0.414638 | 1_1:-76837660 | Msa0045130:CDS |
| TGGCGAAAAGGCTGTTGTTC+AGG | 0.415818 | 1_1:-76839361 | Msa0045130:intron |
| TTTACGCCCCTCAATTCTTC+CGG | 0.416790 | 1_1:+76835858 | None:intergenic |
| ACTTGTGTTGCACACAGTTT+GGG | 0.417897 | 1_1:-76834110 | Msa0045130:three_prime_UTR |
| AATCAATTGCCCATGACATT+AGG | 0.421049 | 1_1:+76834307 | None:intergenic |
| CAACGACAGCTTTCATTGCC+TGG | 0.422877 | 1_1:+76834697 | None:intergenic |
| CTTCATTAATACCCACTTCA+AGG | 0.424318 | 1_1:+76834589 | None:intergenic |
| TTCTTTCGGACTAACTGAAC+AGG | 0.425311 | 1_1:+76834191 | None:intergenic |
| TCTTCCTGGCACCTCTTCTC+TGG | 0.425819 | 1_1:+76835933 | None:intergenic |
| TAGAGACTGGAATATATTGC+AGG | 0.434624 | 1_1:+76834479 | None:intergenic |
| TGAGAGGAAGTTTGTTGCCC+AGG | 0.437811 | 1_1:-76834514 | Msa0045130:three_prime_UTR |
| CTGTATCATTGGACATGCTT+GGG | 0.442480 | 1_1:-76837973 | Msa0045130:CDS |
| ATGCTTGGGCGGATATTTAA+CGG | 0.445195 | 1_1:-76837959 | Msa0045130:CDS |
| GATTACCAAATTAAGGAAAA+GGG | 0.449091 | 1_1:+76836912 | None:intergenic |
| AAGCGTGACTTTGAGGAGAA+TGG | 0.451660 | 1_1:-76836952 | Msa0045130:CDS |
| CCAAGCATGTCCAATGATAC+AGG | 0.451792 | 1_1:+76837974 | None:intergenic |
| GAAGTACACGAGGGAAAATC+CGG | 0.454247 | 1_1:+76834436 | None:intergenic |
| TGATCTTACCAGATATATTA+CGG | 0.458091 | 1_1:-76835679 | Msa0045130:CDS |
| GTGATGATACGTTCGATTGT+AGG | 0.458361 | 1_1:+76836298 | None:intergenic |
| CCAGGAAGACGTGGTTATCC+TGG | 0.466984 | 1_1:-76835919 | Msa0045130:CDS |
| CCTGTATCATTGGACATGCT+TGG | 0.467212 | 1_1:-76837974 | Msa0045130:CDS |
| GTCAATATTCGTTTAGGCGA+TGG | 0.473500 | 1_1:-76839417 | Msa0045130:CDS |
| AGACCGGCAGCTGAAAATAG+AGG | 0.475986 | 1_1:+76837698 | None:intergenic |
| TGAACATGCCGGAAGAATTG+AGG | 0.476429 | 1_1:-76835866 | Msa0045130:CDS |
| CTCGAGAACTTGTCCATGCC+GGG | 0.477725 | 1_1:+76839389 | None:intergenic |
| GGACAAGTTCTCGAGATTGA+TGG | 0.478592 | 1_1:-76839381 | Msa0045130:CDS |
| GCACAGATTTGTCGTCAGGC+TGG | 0.482424 | 1_1:-76837656 | Msa0045130:CDS |
| ACTATTGATCAGGTATTTGA+AGG | 0.488267 | 1_1:-76839114 | Msa0045130:intron |
| TGCACACAGTTTGGGATGGT+TGG | 0.495421 | 1_1:-76834102 | Msa0045130:three_prime_UTR |
| ACAGAATACATGACTGTGTC+TGG | 0.496594 | 1_1:-76839600 | Msa0045130:CDS |
| CCAGTCTGTATCATCTCCTC+AGG | 0.497280 | 1_1:+76837770 | None:intergenic |
| TCAGGATAGGTTCTATCACT+AGG | 0.497405 | 1_1:+76837788 | None:intergenic |
| GTAATATATCTGGTAAGATC+AGG | 0.498299 | 1_1:+76835681 | None:intergenic |
| CTGAACAGGCTCAAAATATG+AGG | 0.506055 | 1_1:+76834205 | None:intergenic |
| GCTGCCAGAGAAGAGGTGCC+AGG | 0.506143 | 1_1:-76835937 | Msa0045130:CDS |
| GAACATGCCGGAAGAATTGA+GGG | 0.507410 | 1_1:-76835865 | Msa0045130:CDS |
| TGAAACAAGCAAACATACAC+TGG | 0.507667 | 1_1:+76834061 | None:intergenic |
| CTTTGAGGAGAATGGCTCAA+TGG | 0.507722 | 1_1:-76836944 | Msa0045130:CDS |
| GCAGGTGTCGTAGGCTCCCT+GGG | 0.511296 | 1_1:+76834497 | None:intergenic |
| CTCAAGAATGACCAATGGTC+CGG | 0.512187 | 1_1:+76839572 | None:intergenic |
| TCTCGAGAACTTGTCCATGC+CGG | 0.512745 | 1_1:+76839388 | None:intergenic |
| ATGTTCTTCCATCACTATCT+CGG | 0.513623 | 1_1:-76835042 | Msa0045130:CDS |
| TCCATGCAAGATCTAGAGAC+TGG | 0.515422 | 1_1:+76834466 | None:intergenic |
| TGCAGCTATGGGAGTTAACA+TGG | 0.517732 | 1_1:-76836992 | Msa0045130:CDS |
| TGCCATTGGAAAGGATGTCC+AGG | 0.518353 | 1_1:-76834715 | Msa0045130:CDS |
| TCAATCAGCGCCTAATGTCA+TGG | 0.518643 | 1_1:-76834317 | Msa0045130:three_prime_UTR |
| ATCACTATCTCGGTTGATGA+AGG | 0.519694 | 1_1:-76835032 | Msa0045130:intron |
| ATCTTGCATGGACTTTACTC+CGG | 0.519977 | 1_1:-76834455 | Msa0045130:three_prime_UTR |
| ATTCTAACCATGCCAAATGA+TGG | 0.521293 | 1_1:-76835814 | Msa0045130:intron |
| GTCTGGAGTTACCGGACCAT+TGG | 0.521668 | 1_1:-76839583 | Msa0045130:CDS |
| GGTTCTATCACTAGGGTTGA+CGG | 0.522874 | 1_1:+76837796 | None:intergenic |
| TATAGGAATCACAACATCTA+CGG | 0.526427 | 1_1:+76834164 | None:intergenic |
| TCTCGAGATTGATGGCGAAA+AGG | 0.527436 | 1_1:-76839373 | Msa0045130:CDS |
| GTAAAACTGGTCAAGAGTCT+TGG | 0.529021 | 1_1:+76834398 | None:intergenic |
| TACAACCGTTAATAATATTG+AGG | 0.530534 | 1_1:+76834558 | None:intergenic |
| GCTGATTGAGCAAGAGACTA+AGG | 0.530727 | 1_1:+76834331 | None:intergenic |
| TGGGGAGGGAATGACTAGAA+AGG | 0.531100 | 1_1:-76834890 | Msa0045130:CDS |
| GAATATATTGCAGGTGTCGT+AGG | 0.532438 | 1_1:+76834488 | None:intergenic |
| TTCATTACCATCATTTGGCA+TGG | 0.532782 | 1_1:+76835807 | None:intergenic |
| TAATAAGGATAGTTGTCACT+TGG | 0.536391 | 1_1:-76833997 | Msa0045130:three_prime_UTR |
| CTGTATGCAACTTATGCCAT+TGG | 0.536747 | 1_1:-76834729 | Msa0045130:CDS |
| AGCACTTTCATCTGAGGACC+TGG | 0.537514 | 1_1:-76834667 | Msa0045130:CDS |
| TAGGCAGTTGCATAATAGAC+AGG | 0.544818 | 1_1:-76835637 | Msa0045130:intron |
| TCCAGTCTCTAGATCTTGCA+TGG | 0.545696 | 1_1:-76834467 | Msa0045130:three_prime_UTR |
| GAGAGGAAGTTTGTTGCCCA+GGG | 0.548471 | 1_1:-76834513 | Msa0045130:three_prime_UTR |
| CTGTATCATCTCCTCAGGAT+AGG | 0.550371 | 1_1:+76837775 | None:intergenic |
| ATCATCAATTACCAGCATCT+CGG | 0.552362 | 1_1:+76834373 | None:intergenic |
| AGTGATGGAAGAACATTGAT+TGG | 0.552550 | 1_1:+76835049 | None:intergenic |
| CAATCAGCGCCTAATGTCAT+GGG | 0.553748 | 1_1:-76834316 | Msa0045130:three_prime_UTR |
| AACTGGTCAAGAGTCTTGGC+TGG | 0.554684 | 1_1:+76834402 | None:intergenic |
| GGAAGAATTGAGGGGCGTAA+AGG | 0.556865 | 1_1:-76835856 | Msa0045130:CDS |
| CCTGAGGAGATGATACAGAC+TGG | 0.558233 | 1_1:-76837770 | Msa0045130:CDS |
| AGAGAAAATTAGTAGATGCC+AGG | 0.561602 | 1_1:+76834649 | None:intergenic |
| ACCACTGCAGAGTGCTATTG+GGG | 0.563672 | 1_1:-76834908 | Msa0045130:intron |
| ATAGGAATCACAACATCTAC+GGG | 0.567475 | 1_1:+76834165 | None:intergenic |
| TGCCTGGACATCCTTTCCAA+TGG | 0.569487 | 1_1:+76834713 | None:intergenic |
| TAGTGAAATTGTCCTTGAAG+TGG | 0.569681 | 1_1:-76834601 | Msa0045130:CDS |
| CTGCAGAGTGCTATTGGGGA+GGG | 0.572458 | 1_1:-76834904 | Msa0045130:intron |
| GGCGATGGAACTACCCGGCA+TGG | 0.573515 | 1_1:-76839402 | Msa0045130:CDS |
| GCAACAATTTATGAACATGC+CGG | 0.577220 | 1_1:-76835877 | Msa0045130:CDS |
| CAGGCAATGAAAGCTGTCGT+TGG | 0.577939 | 1_1:-76834696 | Msa0045130:CDS |
| TGTGCAGCAATTTCATTATG+GGG | 0.578028 | 1_1:+76837674 | None:intergenic |
| TCATTCTGATGTGTCCAACC+AGG | 0.578586 | 1_1:-76834866 | Msa0045130:intron |
| CAGGATAGGTTCTATCACTA+GGG | 0.584904 | 1_1:+76837789 | None:intergenic |
| GATAGAACAAATGCGGACTT+AGG | 0.587137 | 1_1:+76834266 | None:intergenic |
| GAATATCTGGCTTATGAATG+TGG | 0.590666 | 1_1:-76836250 | Msa0045130:CDS |
| ACGAACAGATAAATACATCA+AGG | 0.595675 | 1_1:+76833968 | None:intergenic |
| AGTGAAATTGTCCTTGAAGT+GGG | 0.600879 | 1_1:-76834600 | Msa0045130:CDS |
| ATGGAAGAACATTGATTGGT+GGG | 0.602705 | 1_1:+76835053 | None:intergenic |
| GTGTTGCACACAGTTTGGGA+TGG | 0.602819 | 1_1:-76834106 | Msa0045130:three_prime_UTR |
| AGGTATTTGAAGGTACATCT+GGG | 0.603787 | 1_1:-76839104 | Msa0045130:CDS |
| AGGGACAGATATACATCGAT+AGG | 0.603945 | 1_1:-76835656 | Msa0045130:CDS |
| AATTTCTGGACAAGTTTGAG+AGG | 0.606081 | 1_1:-76834530 | Msa0045130:three_prime_UTR |
| TATCATTGGACATGCTTGGG+CGG | 0.609865 | 1_1:-76837970 | Msa0045130:CDS |
| TATCTGGTAAGATCAGGAGT+TGG | 0.610819 | 1_1:+76835687 | None:intergenic |
| TTCATCAACCGAGATAGTGA+TGG | 0.612897 | 1_1:+76835034 | None:intergenic |
| AGAAGAAGCACTTTCATCTG+AGG | 0.617772 | 1_1:-76834673 | Msa0045130:CDS |
| TTATGCTGATGCTCTTCGTG+AGG | 0.621125 | 1_1:-76836191 | Msa0045130:intron |
| GTCATGAATTCTATTGCTAG+AGG | 0.622259 | 1_1:-76837731 | Msa0045130:CDS |
| GGTATCTGCTGCCAGAGAAG+AGG | 0.624465 | 1_1:-76835944 | Msa0045130:CDS |
| GAAGAGGTGCCAGGAAGACG+TGG | 0.628045 | 1_1:-76835928 | Msa0045130:CDS |
| GACCGTACAGTTTACTGGAG+AGG | 0.629013 | 1_1:-76839064 | Msa0045130:intron |
| GTGCAGCAATTTCATTATGG+GGG | 0.632413 | 1_1:+76837675 | None:intergenic |
| TACCTCTCCAGTAAACTGTA+CGG | 0.633139 | 1_1:+76839062 | None:intergenic |
| GATGGAAGAACATTGATTGG+TGG | 0.633609 | 1_1:+76835052 | None:intergenic |
| ACTGCAGAGTGCTATTGGGG+AGG | 0.635578 | 1_1:-76834905 | Msa0045130:intron |
| GACCGGCAGCTGAAAATAGA+GGG | 0.638267 | 1_1:+76837699 | None:intergenic |
| ACTTTCTCAAGAATGACCAA+TGG | 0.645136 | 1_1:+76839567 | None:intergenic |
| GAAACAAGCAAACATACACT+GGG | 0.645433 | 1_1:+76834062 | None:intergenic |
| GAAGTCTGATAATCTTCTTG+AGG | 0.648163 | 1_1:-76837615 | Msa0045130:intron |
| TGCAACTTATGCCATTGGAA+AGG | 0.655175 | 1_1:-76834724 | Msa0045130:CDS |
| CTTACCAGATATATTACGGA+GGG | 0.659583 | 1_1:-76835675 | Msa0045130:CDS |
| AGATCTGTATACATATAACC+AGG | 0.661413 | 1_1:+76835901 | None:intergenic |
| CAAACAAGAAGAGACCTGGT+TGG | 0.666933 | 1_1:+76834852 | None:intergenic |
| GTTTAGGCGATGGAACTACC+CGG | 0.678023 | 1_1:-76839407 | Msa0045130:CDS |
| TATGATGGATAGAACAAATG+CGG | 0.680825 | 1_1:+76834259 | None:intergenic |
| TAGTGATAGAACCTATCCTG+AGG | 0.709001 | 1_1:-76837786 | Msa0045130:CDS |
| TCTTACCAGATATATTACGG+AGG | 0.728933 | 1_1:-76835676 | Msa0045130:CDS |
| ATACGATGAAGAAGTACACG+AGG | 0.729276 | 1_1:+76834426 | None:intergenic |
| GCAGTAGTAAGAGCAATACG+AGG | 0.737884 | 1_1:+76836274 | None:intergenic |
| TACGATGAAGAAGTACACGA+GGG | 0.742809 | 1_1:+76834427 | None:intergenic |
| AACATGCCGGAAGAATTGAG+GGG | 0.764342 | 1_1:-76835864 | Msa0045130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATATTTCTAATTATTC+AGG | - | chr1_1:76835738-76835757 | Msa0045130:intron | 10.0% |
| !!! | ATTATAATTTTTTTAACAAG+GGG | + | chr1_1:76837158-76837177 | None:intergenic | 10.0% |
| !!! | CATTATAATTTTTTTAACAA+GGG | + | chr1_1:76837159-76837178 | None:intergenic | 10.0% |
| !!! | TCATTATAATTTTTTTAACA+AGG | + | chr1_1:76837160-76837179 | None:intergenic | 10.0% |
| !! | ATCTTGTAATTTAATTATTT+AGG | - | chr1_1:76839535-76839554 | Msa0045130:intron | 10.0% |
| !!! | TAAACAGCATATATTTTTAT+GGG | + | chr1_1:76834608-76834627 | None:intergenic | 15.0% |
| !!! | ATAAACAGCATATATTTTTA+TGG | + | chr1_1:76834609-76834628 | None:intergenic | 15.0% |
| !!! | TTTAACTTGAAATTTTGTAT+TGG | - | chr1_1:76834915-76834934 | Msa0045130:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr1_1:76835169-76835188 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr1_1:76835168-76835187 | Msa0045130:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr1_1:76835192-76835211 | Msa0045130:intron | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | - | chr1_1:76835295-76835314 | Msa0045130:intron | 15.0% |
| !!! | TTTTAAAGATTACCAAATTA+AGG | + | chr1_1:76836660-76836679 | None:intergenic | 15.0% |
| !!! | AATTTTCTAAAAACGTTAAA+TGG | - | chr1_1:76837028-76837047 | Msa0045130:CDS | 15.0% |
| !!! | TACTTCAATATTTTGTTTAA+TGG | - | chr1_1:76837077-76837096 | Msa0045130:intron | 15.0% |
| !!! | TTATAATTTTTTTAACAAGG+GGG | + | chr1_1:76837157-76837176 | None:intergenic | 15.0% |
| !! | GGTTAAGAAATAAAAATTAT+CGG | + | chr1_1:76837191-76837210 | None:intergenic | 15.0% |
| !!! | AGTAAATTTTGCTTATATTT+TGG | + | chr1_1:76838070-76838089 | None:intergenic | 15.0% |
| !!! | ATAAGCAAAATTTACTTTTT+AGG | - | chr1_1:76838074-76838093 | Msa0045130:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | chr1_1:76838172-76838191 | Msa0045130:intron | 15.0% |
| !! | ACATATATTTCTTAATCAAA+AGG | - | chr1_1:76838596-76838615 | Msa0045130:intron | 15.0% |
| !! | TTATATGTAAACTATCTTAT+TGG | - | chr1_1:76838755-76838774 | Msa0045130:intron | 15.0% |
| !!! | ATTTTCCTCAATATTATTAA+CGG | - | chr1_1:76838999-76839018 | Msa0045130:intron | 15.0% |
| !! | ATCCATCATAAATATAATAA+AGG | - | chr1_1:76839316-76839335 | Msa0045130:intron | 15.0% |
| !! | AACCTTTATTATATTTATGA+TGG | + | chr1_1:76839321-76839340 | None:intergenic | 15.0% |
| !!! | TATTTAGGATATTTGTAATA+AGG | - | chr1_1:76839550-76839569 | Msa0045130:intron | 15.0% |
| !! | AATAAAGAGACACATAATTT+AGG | + | chr1_1:76833936-76833955 | None:intergenic | 20.0% |
| !! | AGTTAAAATTTAGTCACAAA+GGG | + | chr1_1:76834087-76834106 | None:intergenic | 20.0% |
| !! | AAGTTAAAATTTAGTCACAA+AGG | + | chr1_1:76834088-76834107 | None:intergenic | 20.0% |
| !!! | TTGTGACTAAATTTTAACTT+CGG | - | chr1_1:76834088-76834107 | Msa0045130:three_prime_UTR | 20.0% |
| !! | AAACTATAAAATGACGTTAA+AGG | + | chr1_1:76834413-76834432 | None:intergenic | 20.0% |
| !! | CTTTATAATAACTATTGATC+AGG | - | chr1_1:76834438-76834457 | Msa0045130:three_prime_UTR | 20.0% |
| !! | TAACAGTTAATGCATTATTT+AGG | + | chr1_1:76834664-76834683 | None:intergenic | 20.0% |
| !! | TATCTTCTTTATCATTATCT+GGG | + | chr1_1:76834778-76834797 | None:intergenic | 20.0% |
| !! | TTATCTTCTTTATCATTATC+TGG | + | chr1_1:76834779-76834798 | None:intergenic | 20.0% |
| !! | TAAATTCTGCTTAGAAAAAA+GGG | - | chr1_1:76834993-76835012 | Msa0045130:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr1_1:76835135-76835154 | Msa0045130:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr1_1:76835178-76835197 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr1_1:76835255-76835274 | Msa0045130:intron | 20.0% |
| !! | TAAAAGTTCTTCCTTTAAAT+TGG | - | chr1_1:76835457-76835476 | Msa0045130:intron | 20.0% |
| !! | TAAAAGCAAAATGTTAAAGA+AGG | + | chr1_1:76835492-76835511 | None:intergenic | 20.0% |
| !! | GAAAAGAAATATTATCAGAT+AGG | - | chr1_1:76836119-76836138 | Msa0045130:intron | 20.0% |
| !! | AAATATTATCAGATAGGAAA+GGG | - | chr1_1:76836125-76836144 | Msa0045130:intron | 20.0% |
| !! | TACTCATATTACATAAAGTA+TGG | + | chr1_1:76836481-76836500 | None:intergenic | 20.0% |
| !! | TACTTTATGTAATATGAGTA+AGG | - | chr1_1:76836481-76836500 | Msa0045130:intron | 20.0% |
| !!! | TTTGATTCTTCATTTTTCTT+TGG | - | chr1_1:76836836-76836855 | Msa0045130:intron | 20.0% |
| !!! | TTGATTCTTCATTTTTCTTT+GGG | - | chr1_1:76836837-76836856 | Msa0045130:intron | 20.0% |
| !! | TAAGAAATAAAAATTATCGG+AGG | + | chr1_1:76837188-76837207 | None:intergenic | 20.0% |
| !!! | TTTTCCTAATAAATTACAGT+TGG | + | chr1_1:76837404-76837423 | None:intergenic | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | + | chr1_1:76838163-76838182 | None:intergenic | 20.0% |
| !! | ATATAAAAGCAGTTAATTGT+TGG | - | chr1_1:76838224-76838243 | Msa0045130:intron | 20.0% |
| !! | TAAAAAAAGAAAACTACACA+GGG | + | chr1_1:76838738-76838757 | None:intergenic | 20.0% |
| !! | ATAAAAAAAGAAAACTACAC+AGG | + | chr1_1:76838739-76838758 | None:intergenic | 20.0% |
| ! | TTGACAATCTCTTGATATTT+GGG | + | chr1_1:76834130-76834149 | None:intergenic | 25.0% |
| ! | ATTGACAATCTCTTGATATT+TGG | + | chr1_1:76834131-76834150 | None:intergenic | 25.0% |
| ! | AATCTTATTATGCATGCTTA+AGG | + | chr1_1:76834233-76834252 | None:intergenic | 25.0% |
| ! | TGTCTTATCTCAATGAAATT+TGG | - | chr1_1:76834629-76834648 | Msa0045130:CDS | 25.0% |
| ! | CTAAATTCTGCTTAGAAAAA+AGG | - | chr1_1:76834992-76835011 | Msa0045130:intron | 25.0% |
| ! | AAATTCTGCTTAGAAAAAAG+GGG | - | chr1_1:76834994-76835013 | Msa0045130:intron | 25.0% |
| ! | TTGAAATTCTAGTAATCACA+TGG | - | chr1_1:76835032-76835051 | Msa0045130:intron | 25.0% |
| ! | TCAATTCAATAACCAATACT+TGG | + | chr1_1:76835435-76835454 | None:intergenic | 25.0% |
| !!! | TTCCTTTAAATTGGTTTTCT+TGG | - | chr1_1:76835466-76835485 | Msa0045130:intron | 25.0% |
| !!! | ACATTTTGCTTTTACTATAG+TGG | - | chr1_1:76835498-76835517 | Msa0045130:intron | 25.0% |
| !! | TGGATTTTTCTTATTGATGA+TGG | - | chr1_1:76836092-76836111 | Msa0045130:intron | 25.0% |
| ! | GAAATATTATCAGATAGGAA+AGG | - | chr1_1:76836124-76836143 | Msa0045130:intron | 25.0% |
| ! | AATATTATCAGATAGGAAAG+GGG | - | chr1_1:76836126-76836145 | Msa0045130:intron | 25.0% |
| ! | ATAATGATTAATACGTCAGT+AGG | + | chr1_1:76836301-76836320 | None:intergenic | 25.0% |
| ! | TTTATGTAATATGAGTAAGG+TGG | - | chr1_1:76836484-76836503 | Msa0045130:intron | 25.0% |
| ! | TTACAAATCTTGATTTATGC+AGG | - | chr1_1:76836513-76836532 | Msa0045130:intron | 25.0% |
| ! | TACAAATCTTGATTTATGCA+GGG | - | chr1_1:76836514-76836533 | Msa0045130:intron | 25.0% |
| ! | GATTACCAAATTAAGGAAAA+GGG | + | chr1_1:76836653-76836672 | None:intergenic | 25.0% |
| ! | AGATTACCAAATTAAGGAAA+AGG | + | chr1_1:76836654-76836673 | None:intergenic | 25.0% |
| ! | AACCAAAATTACCAGAATAA+GGG | + | chr1_1:76836709-76836728 | None:intergenic | 25.0% |
| ! | AAACCAAAATTACCAGAATA+AGG | + | chr1_1:76836710-76836729 | None:intergenic | 25.0% |
| ! | AATAAATGTCTCATAATGCT+TGG | - | chr1_1:76836789-76836808 | Msa0045130:intron | 25.0% |
| !!! | TGATTCTTCATTTTTCTTTG+GGG | - | chr1_1:76836838-76836857 | Msa0045130:intron | 25.0% |
| !!! | ATACTAGTTCTACATTAAGA+TGG | + | chr1_1:76836955-76836974 | None:intergenic | 25.0% |
| ! | CTTAATGTAGAACTAGTATT+TGG | - | chr1_1:76836956-76836975 | Msa0045130:CDS | 25.0% |
| ! | TGTACCAACTGTAATTTATT+AGG | - | chr1_1:76837397-76837416 | Msa0045130:intron | 25.0% |
| ! | TAAAGAAAAATACAGGAGAA+TGG | + | chr1_1:76837476-76837495 | None:intergenic | 25.0% |
| !! | AATCCTCTAAAGAAAAATAC+AGG | + | chr1_1:76837483-76837502 | None:intergenic | 25.0% |
| ! | ATTACTTCATTACCATCATT+TGG | + | chr1_1:76837763-76837782 | None:intergenic | 25.0% |
| !! | ATGAATTTTGTCTTCTGTTT+TGG | - | chr1_1:76837781-76837800 | Msa0045130:CDS | 25.0% |
| ! | TGATCTTACCAGATATATTA+CGG | - | chr1_1:76837883-76837902 | Msa0045130:intron | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | chr1_1:76838099-76838118 | Msa0045130:intron | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr1_1:76838099-76838118 | None:intergenic | 25.0% |
| !! | TTCAATTCTCTTTCTTTTCT+TGG | - | chr1_1:76838307-76838326 | Msa0045130:intron | 25.0% |
| !! | CAATTTTCATTGATACATCA+AGG | - | chr1_1:76838361-76838380 | Msa0045130:intron | 25.0% |
| ! | TACAACCGTTAATAATATTG+AGG | + | chr1_1:76839007-76839026 | None:intergenic | 25.0% |
| ! | ATATTATTAACGGTTGTATC+TGG | - | chr1_1:76839009-76839028 | Msa0045130:intron | 25.0% |
| ! | CCAAAAGTAAAAAATGGTAT+AGG | + | chr1_1:76839418-76839437 | None:intergenic | 25.0% |
| !!! | CCTATACCATTTTTTACTTT+TGG | - | chr1_1:76839415-76839434 | Msa0045130:CDS | 25.0% |
| !!! | TACCATTTTTTACTTTTGGT+TGG | - | chr1_1:76839419-76839438 | Msa0045130:CDS | 25.0% |
| !!! | ACCATTTTTTACTTTTGGTT+GGG | - | chr1_1:76839420-76839439 | Msa0045130:CDS | 25.0% |
| GAGATTGTCAATATTCGTTT+AGG | - | chr1_1:76834139-76834158 | Msa0045130:three_prime_UTR | 30.0% | |
| ACTATTGATCAGGTATTTGA+AGG | - | chr1_1:76834448-76834467 | Msa0045130:three_prime_UTR | 30.0% | |
| CTCAATGAAATTTGGATTAC+AGG | - | chr1_1:76834637-76834656 | Msa0045130:CDS | 30.0% | |
| TTATAAGTATAGCCAACCAT+CGG | + | chr1_1:76834735-76834754 | None:intergenic | 30.0% | |
| TTCTTTATCATTATCTGGGA+CGG | + | chr1_1:76834774-76834793 | None:intergenic | 30.0% | |
| TTGCATGTCATCTTGATTAA+TGG | - | chr1_1:76834859-76834878 | Msa0045130:intron | 30.0% | |
| ATACATGTAAACCTAGAAAC+TGG | - | chr1_1:76834966-76834985 | Msa0045130:intron | 30.0% | |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr1_1:76835086-76835105 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr1_1:76835087-76835106 | Msa0045130:intron | 30.0% |
| GTTAAAAACTCCTGTATCAT+TGG | - | chr1_1:76835578-76835597 | Msa0045130:intron | 30.0% | |
| ACTGCATGTTTGTTTATTTC+TGG | - | chr1_1:76835696-76835715 | Msa0045130:CDS | 30.0% | |
| ! | CTCTTGAATTGTATGACTTT+TGG | - | chr1_1:76836043-76836062 | Msa0045130:intron | 30.0% |
| ATTGTGATCTGTGTTTCATT+TGG | - | chr1_1:76836072-76836091 | Msa0045130:intron | 30.0% | |
| !! | TTTGACTACTTTTGTAAAGG+CGG | + | chr1_1:76836202-76836221 | None:intergenic | 30.0% |
| !! | TGGTTTGACTACTTTTGTAA+AGG | + | chr1_1:76836205-76836224 | None:intergenic | 30.0% |
| !!! | ATAGCATTGTGCTTGTTTTA+TGG | + | chr1_1:76836225-76836244 | None:intergenic | 30.0% |
| TATAAGCAATATCACAAGTG+AGG | + | chr1_1:76836381-76836400 | None:intergenic | 30.0% | |
| TCTTATTGCCTTAGATTAAG+CGG | - | chr1_1:76836416-76836435 | Msa0045130:intron | 30.0% | |
| AAAATAGACCGCTTAATCTA+AGG | + | chr1_1:76836427-76836446 | None:intergenic | 30.0% | |
| ACAAATCTTGATTTATGCAG+GGG | - | chr1_1:76836515-76836534 | Msa0045130:intron | 30.0% | |
| ACCAAAATTACCAGAATAAG+GGG | + | chr1_1:76836708-76836727 | None:intergenic | 30.0% | |
| !! | TTTTTCCTTTCCAGTATTGA+TGG | - | chr1_1:76836742-76836761 | Msa0045130:intron | 30.0% |
| !! | TTCATTTTTCTTTGGGGATT+GGG | - | chr1_1:76836844-76836863 | Msa0045130:intron | 30.0% |
| !!! | GGATCAACATATTGTTTTTG+AGG | - | chr1_1:76837098-76837117 | Msa0045130:intron | 30.0% |
| ! | ATGTCTGTACAATTGCTATT+GGG | - | chr1_1:76837221-76837240 | Msa0045130:intron | 30.0% |
| AGAATGGTAAACACAGTAAA+AGG | + | chr1_1:76837460-76837479 | None:intergenic | 30.0% | |
| ! | TCTCCTGTATTTTTCTTTAG+AGG | - | chr1_1:76837477-76837496 | Msa0045130:intron | 30.0% |
| AGATCTGTATACATATAACC+AGG | + | chr1_1:76837664-76837683 | None:intergenic | 30.0% | |
| CATGGTTAGAATTGGAATTT+GGG | + | chr1_1:76837740-76837759 | None:intergenic | 30.0% | |
| !! | TGTCTTCTGTTTTGGATAAA+AGG | - | chr1_1:76837789-76837808 | Msa0045130:CDS | 30.0% |
| GTAATATATCTGGTAAGATC+AGG | + | chr1_1:76837884-76837903 | None:intergenic | 30.0% | |
| TGCATTATTACGAGAGAATT+TGG | - | chr1_1:76838007-76838026 | Msa0045130:intron | 30.0% | |
| !!! | TGCTTATATTTTGGAACAGA+GGG | + | chr1_1:76838061-76838080 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGGAACAG+AGG | + | chr1_1:76838062-76838081 | None:intergenic | 30.0% |
| GATGTATGTGGTTCATAATA+TGG | + | chr1_1:76838126-76838145 | None:intergenic | 30.0% | |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | chr1_1:76838175-76838194 | Msa0045130:intron | 30.0% |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | chr1_1:76838176-76838195 | Msa0045130:intron | 30.0% |
| ! | TTGTGCTATATAATGGGATT+CGG | - | chr1_1:76838248-76838267 | Msa0045130:intron | 30.0% |
| !! | GGTATTCTCTCTGAAAATTT+TGG | - | chr1_1:76838269-76838288 | Msa0045130:intron | 30.0% |
| CAGGGATCATATATATTTCA+TGG | + | chr1_1:76838394-76838413 | None:intergenic | 30.0% | |
| CAATCTCATACAATTCATCA+GGG | + | chr1_1:76838412-76838431 | None:intergenic | 30.0% | |
| TAATGCTTAGAATGTTTACC+AGG | + | chr1_1:76838456-76838475 | None:intergenic | 30.0% | |
| ! | TTTCTTAATCAAAAGGTGTG+TGG | - | chr1_1:76838603-76838622 | Msa0045130:intron | 30.0% |
| ACACTCTAATGATGTATCAT+TGG | - | chr1_1:76838629-76838648 | Msa0045130:intron | 30.0% | |
| !! | TATGATGGATAGAACAAATG+CGG | + | chr1_1:76839306-76839325 | None:intergenic | 30.0% |
| TATAGGAATCACAACATCTA+CGG | + | chr1_1:76839401-76839420 | None:intergenic | 30.0% | |
| TAATAAGGATAGTTGTCACT+TGG | - | chr1_1:76839565-76839584 | Msa0045130:CDS | 30.0% | |
| ACGAACAGATAAATACATCA+AGG | + | chr1_1:76839597-76839616 | None:intergenic | 30.0% | |
| !!! | TGAAACATGCTTTTTTAGTC+TGG | - | chr1_1:76839638-76839657 | Msa0045130:exon | 30.0% |
| !!! | GAAACATGCTTTTTTAGTCT+GGG | - | chr1_1:76839639-76839658 | Msa0045130:exon | 30.0% |
| !!! | AAACATGCTTTTTTAGTCTG+GGG | - | chr1_1:76839640-76839659 | Msa0045130:exon | 30.0% |
| ACTTTCTCAAGAATGACCAA+TGG | + | chr1_1:76833998-76834017 | None:intergenic | 35.0% | |
| GGTCATTCTTGAGAAAGTTA+AGG | - | chr1_1:76834000-76834019 | Msa0045130:three_prime_UTR | 35.0% | |
| ! | AGGTATTTGAAGGTACATCT+GGG | - | chr1_1:76834458-76834477 | Msa0045130:three_prime_UTR | 35.0% |
| AAAACACATAATTGAGCCGA+TGG | - | chr1_1:76834716-76834735 | Msa0045130:CDS | 35.0% | |
| ! | GAATTTAGCTTCCAGTTTCT+AGG | + | chr1_1:76834980-76834999 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr1_1:76835217-76835236 | Msa0045130:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr1_1:76835221-76835240 | Msa0045130:intron | 35.0% |
| !!! | GACACTCATTTTGAAACAGA+GGG | - | chr1_1:76835325-76835344 | Msa0045130:intron | 35.0% |
| !! | GAGTGTTAATTTGTTCTGGA+GGG | - | chr1_1:76835347-76835366 | Msa0045130:intron | 35.0% |
| !! | AGTGTTAATTTGTTCTGGAG+GGG | - | chr1_1:76835348-76835367 | Msa0045130:intron | 35.0% |
| AATACTTGGCTAAATTGCAG+AGG | + | chr1_1:76835421-76835440 | None:intergenic | 35.0% | |
| TCTGCAATTTAGCCAAGTAT+TGG | - | chr1_1:76835420-76835439 | Msa0045130:intron | 35.0% | |
| GGCCAAGAAAACCAATTTAA+AGG | + | chr1_1:76835471-76835490 | None:intergenic | 35.0% | |
| ! | ACAGGAGTTTTTAACACCTA+CGG | + | chr1_1:76835573-76835592 | None:intergenic | 35.0% |
| ! | TGGAAAACCAATTTTACTCG+AGG | - | chr1_1:76835629-76835648 | Msa0045130:intron | 35.0% |
| AAGTAAGCCTCGAGTAAAAT+TGG | + | chr1_1:76835639-76835658 | None:intergenic | 35.0% | |
| ! | AATTTTACTCGAGGCTTACT+TGG | - | chr1_1:76835638-76835657 | Msa0045130:CDS | 35.0% |
| GTCATGAATTCTATTGCTAG+AGG | - | chr1_1:76835831-76835850 | Msa0045130:CDS | 35.0% | |
| TGTGCAGCAATTTCATTATG+GGG | + | chr1_1:76835891-76835910 | None:intergenic | 35.0% | |
| CTGTGCAGCAATTTCATTAT+GGG | + | chr1_1:76835892-76835911 | None:intergenic | 35.0% | |
| TCTGTGCAGCAATTTCATTA+TGG | + | chr1_1:76835893-76835912 | None:intergenic | 35.0% | |
| GAAGTCTGATAATCTTCTTG+AGG | - | chr1_1:76835947-76835966 | Msa0045130:intron | 35.0% | |
| GGGGAATAAAAAATGCGATA+AGG | - | chr1_1:76836145-76836164 | Msa0045130:intron | 35.0% | |
| AATACGTCAGTAGGAACAAA+GGG | + | chr1_1:76836292-76836311 | None:intergenic | 35.0% | |
| TAATACGTCAGTAGGAACAA+AGG | + | chr1_1:76836293-76836312 | None:intergenic | 35.0% | |
| ATTCATGTCAGTTTCTTCAC+AGG | + | chr1_1:76836346-76836365 | None:intergenic | 35.0% | |
| CAAATCTTGATTTATGCAGG+GGG | - | chr1_1:76836516-76836535 | Msa0045130:intron | 35.0% | |
| AAATCTTGATTTATGCAGGG+GGG | - | chr1_1:76836517-76836536 | Msa0045130:intron | 35.0% | |
| !!! | GTTTTTTAAGCGTGACTTTG+AGG | - | chr1_1:76836603-76836622 | Msa0045130:intron | 35.0% |
| ! | AGTGACCCTTTTCCTTAATT+TGG | - | chr1_1:76836645-76836664 | Msa0045130:intron | 35.0% |
| TCTTTAATTCCCCCTTATTC+TGG | - | chr1_1:76836695-76836714 | Msa0045130:intron | 35.0% | |
| CCAAAATTACCAGAATAAGG+GGG | + | chr1_1:76836707-76836726 | None:intergenic | 35.0% | |
| TTCAACCATCAATACTGGAA+AGG | + | chr1_1:76836750-76836769 | None:intergenic | 35.0% | |
| !! | TTCCAGTATTGATGGTTGAA+TGG | - | chr1_1:76836750-76836769 | Msa0045130:intron | 35.0% |
| !! | CTTCATTTTTCTTTGGGGAT+TGG | - | chr1_1:76836843-76836862 | Msa0045130:intron | 35.0% |
| !! | TCATTTTTCTTTGGGGATTG+GGG | - | chr1_1:76836845-76836864 | Msa0045130:intron | 35.0% |
| !! | ACTTCACATGTGTTTGGTTT+TGG | + | chr1_1:76836990-76837009 | None:intergenic | 35.0% |
| TGTACAGACATGTAAGAAAC+AGG | + | chr1_1:76837212-76837231 | None:intergenic | 35.0% | |
| CATGTCTGTACAATTGCTAT+TGG | - | chr1_1:76837220-76837239 | Msa0045130:intron | 35.0% | |
| ! | TTGCTATTGGGATTTACTGT+AGG | - | chr1_1:76837233-76837252 | Msa0045130:intron | 35.0% |
| TCTTACTACTGCTGAATATC+TGG | - | chr1_1:76837299-76837318 | Msa0045130:intron | 35.0% | |
| ! | GAATATCTGGCTTATGAATG+TGG | - | chr1_1:76837312-76837331 | Msa0045130:intron | 35.0% |
| GCAACAATTTATGAACATGC+CGG | - | chr1_1:76837685-76837704 | Msa0045130:CDS | 35.0% | |
| GCATGGTTAGAATTGGAATT+TGG | + | chr1_1:76837741-76837760 | None:intergenic | 35.0% | |
| TCATTTGGCATGGTTAGAAT+TGG | + | chr1_1:76837748-76837767 | None:intergenic | 35.0% | |
| ATTCTAACCATGCCAAATGA+TGG | - | chr1_1:76837748-76837767 | Msa0045130:CDS | 35.0% | |
| TTCATTACCATCATTTGGCA+TGG | + | chr1_1:76837758-76837777 | None:intergenic | 35.0% | |
| TCTTACCAGATATATTACGG+AGG | - | chr1_1:76837886-76837905 | Msa0045130:intron | 35.0% | |
| CTTACCAGATATATTACGGA+GGG | - | chr1_1:76837887-76837906 | Msa0045130:intron | 35.0% | |
| AACTAATCCAACATGGCTTA+TGG | + | chr1_1:76837985-76838004 | None:intergenic | 35.0% | |
| ATGCAGTAACTAATCCAACA+TGG | + | chr1_1:76837992-76838011 | None:intergenic | 35.0% | |
| !! | TGTTGGCTTGTGCTATATAA+TGG | - | chr1_1:76838241-76838260 | Msa0045130:intron | 35.0% |
| !! | GTTGGCTTGTGCTATATAAT+GGG | - | chr1_1:76838242-76838261 | Msa0045130:intron | 35.0% |
| CCAATCTCATACAATTCATC+AGG | + | chr1_1:76838413-76838432 | None:intergenic | 35.0% | |
| CCTGATGAATTGTATGAGAT+TGG | - | chr1_1:76838410-76838429 | Msa0045130:intron | 35.0% | |
| ! | ATGGAAGAACATTGATTGGT+GGG | + | chr1_1:76838512-76838531 | None:intergenic | 35.0% |
| ! | AGTGATGGAAGAACATTGAT+TGG | + | chr1_1:76838516-76838535 | None:intergenic | 35.0% |
| ATGTTCTTCCATCACTATCT+CGG | - | chr1_1:76838520-76838539 | Msa0045130:intron | 35.0% | |
| GATTTCAAAGTTCTGTCAAG+TGG | - | chr1_1:76838570-76838589 | Msa0045130:intron | 35.0% | |
| AGAGAAAATTAGTAGATGCC+AGG | + | chr1_1:76838916-76838935 | None:intergenic | 35.0% | |
| TAGTGAAATTGTCCTTGAAG+TGG | - | chr1_1:76838961-76838980 | Msa0045130:intron | 35.0% | |
| AGTGAAATTGTCCTTGAAGT+GGG | - | chr1_1:76838962-76838981 | Msa0045130:intron | 35.0% | |
| CTTCATTAATACCCACTTCA+AGG | + | chr1_1:76838976-76838995 | None:intergenic | 35.0% | |
| ! | AATTTCTGGACAAGTTTGAG+AGG | - | chr1_1:76839032-76839051 | Msa0045130:intron | 35.0% |
| TAGAGACTGGAATATATTGC+AGG | + | chr1_1:76839086-76839105 | None:intergenic | 35.0% | |
| ATCATCAATTACCAGCATCT+CGG | + | chr1_1:76839192-76839211 | None:intergenic | 35.0% | |
| AATCAATTGCCCATGACATT+AGG | + | chr1_1:76839258-76839277 | None:intergenic | 35.0% | |
| ATAGGAATCACAACATCTAC+GGG | + | chr1_1:76839400-76839419 | None:intergenic | 35.0% | |
| GCCCAACCAAAAGTAAAAAA+TGG | + | chr1_1:76839424-76839443 | None:intergenic | 35.0% | |
| GAAACAAGCAAACATACACT+GGG | + | chr1_1:76839503-76839522 | None:intergenic | 35.0% | |
| TGAAACAAGCAAACATACAC+TGG | + | chr1_1:76839504-76839523 | None:intergenic | 35.0% | |
| ACAGAATACATGACTGTGTC+TGG | - | chr1_1:76833962-76833981 | Msa0045130:three_prime_UTR | 40.0% | |
| TAACTTCGGTCAACTGCATT+AGG | - | chr1_1:76834102-76834121 | Msa0045130:three_prime_UTR | 40.0% | |
| AACTTCGGTCAACTGCATTA+GGG | - | chr1_1:76834103-76834122 | Msa0045130:three_prime_UTR | 40.0% | |
| GTCAATATTCGTTTAGGCGA+TGG | - | chr1_1:76834145-76834164 | Msa0045130:three_prime_UTR | 40.0% | |
| ! | GTCAGAAGCTCAGAACATTT+TGG | + | chr1_1:76834286-76834305 | None:intergenic | 40.0% |
| AATAAAGCAGACAACGATGG+AGG | + | chr1_1:76834329-76834348 | None:intergenic | 40.0% | |
| GTGAATAAAGCAGACAACGA+TGG | + | chr1_1:76834332-76834351 | None:intergenic | 40.0% | |
| ! | CAGGTATTTGAAGGTACATC+TGG | - | chr1_1:76834457-76834476 | Msa0045130:three_prime_UTR | 40.0% |
| TTTACGACCGTACAGTTTAC+TGG | - | chr1_1:76834493-76834512 | Msa0045130:three_prime_UTR | 40.0% | |
| TACCTCTCCAGTAAACTGTA+CGG | + | chr1_1:76834503-76834522 | None:intergenic | 40.0% | |
| ! | TATCATTATCTGGGACGGTT+TGG | + | chr1_1:76834769-76834788 | None:intergenic | 40.0% |
| GCTTAGGTGATAGTTACGAT+TGG | + | chr1_1:76834804-76834823 | None:intergenic | 40.0% | |
| TTCTGCTTAGAAAAAAGGGG+AGG | - | chr1_1:76834997-76835016 | Msa0045130:intron | 40.0% | |
| GAGGGAGTAGAATAGTAATC+AGG | + | chr1_1:76835064-76835083 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr1_1:76835082-76835101 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr1_1:76835220-76835239 | Msa0045130:intron | 40.0% |
| !!! | CGACACTCATTTTGAAACAG+AGG | - | chr1_1:76835324-76835343 | Msa0045130:intron | 40.0% |
| !! | GAGGGAGTGTTAATTTGTTC+TGG | - | chr1_1:76835343-76835362 | Msa0045130:intron | 40.0% |
| !! | GGAGTGTTAATTTGTTCTGG+AGG | - | chr1_1:76835346-76835365 | Msa0045130:intron | 40.0% |
| !! | GTGTTAATTTGTTCTGGAGG+GGG | - | chr1_1:76835349-76835368 | Msa0045130:intron | 40.0% |
| TTGGCTAAATTGCAGAGGAA+CGG | + | chr1_1:76835416-76835435 | None:intergenic | 40.0% | |
| CTACGGATGTAAACAAGAGA+GGG | + | chr1_1:76835556-76835575 | None:intergenic | 40.0% | |
| CTGTATCATTGGACATGCTT+GGG | - | chr1_1:76835589-76835608 | Msa0045130:intron | 40.0% | |
| ATGCTTGGGCGGATATTTAA+CGG | - | chr1_1:76835603-76835622 | Msa0045130:intron | 40.0% | |
| GAGGCTTACTTGGATATATC+AGG | - | chr1_1:76835648-76835667 | Msa0045130:CDS | 40.0% | |
| CAGGATAGGTTCTATCACTA+GGG | + | chr1_1:76835776-76835795 | None:intergenic | 40.0% | |
| TCAGGATAGGTTCTATCACT+AGG | + | chr1_1:76835777-76835796 | None:intergenic | 40.0% | |
| TAGTGATAGAACCTATCCTG+AGG | - | chr1_1:76835776-76835795 | Msa0045130:intron | 40.0% | |
| AATTTCATTATGGGGGAGAC+CGG | + | chr1_1:76835883-76835902 | None:intergenic | 40.0% | |
| GTGCAGCAATTTCATTATGG+GGG | + | chr1_1:76835890-76835909 | None:intergenic | 40.0% | |
| AGTTTCTTCACAGGAGTTGT+CGG | + | chr1_1:76836337-76836356 | None:intergenic | 40.0% | |
| !!! | TGCCATTGTTTTTGCAGCTA+TGG | - | chr1_1:76836558-76836577 | Msa0045130:intron | 40.0% |
| !!! | GCCATTGTTTTTGCAGCTAT+GGG | - | chr1_1:76836559-76836578 | Msa0045130:intron | 40.0% |
| TCCCATAGCTGCAAAAACAA+TGG | + | chr1_1:76836563-76836582 | None:intergenic | 40.0% | |
| ! | CCCCCTTATTCTGGTAATTT+TGG | - | chr1_1:76836704-76836723 | Msa0045130:intron | 40.0% |
| AGCCATTCAACCATCAATAC+TGG | + | chr1_1:76836755-76836774 | None:intergenic | 40.0% | |
| ACCAAACACATGTGAAGTGT+AGG | - | chr1_1:76836992-76837011 | Msa0045130:CDS | 40.0% | |
| CCAAACACATGTGAAGTGTA+GGG | - | chr1_1:76836993-76837012 | Msa0045130:CDS | 40.0% | |
| GTGATGATACGTTCGATTGT+AGG | + | chr1_1:76837267-76837286 | None:intergenic | 40.0% | |
| TCACTTGTTCTTGATCCTAC+AGG | - | chr1_1:76837597-76837616 | Msa0045130:intron | 40.0% | |
| TATCTGGTAAGATCAGGAGT+TGG | + | chr1_1:76837878-76837897 | None:intergenic | 40.0% | |
| AGGGACAGATATACATCGAT+AGG | - | chr1_1:76837906-76837925 | Msa0045130:intron | 40.0% | |
| TAGGCAGTTGCATAATAGAC+AGG | - | chr1_1:76837925-76837944 | Msa0045130:CDS | 40.0% | |
| CAGTTGCATAATAGACAGGT+GGG | - | chr1_1:76837929-76837948 | Msa0045130:CDS | 40.0% | |
| ATGAATGCCATAAGCCATGT+TGG | - | chr1_1:76837975-76837994 | Msa0045130:CDS | 40.0% | |
| TACAATCAGTCTAAGTGACC+TGG | - | chr1_1:76838435-76838454 | Msa0045130:intron | 40.0% | |
| ! | GATGGAAGAACATTGATTGG+TGG | + | chr1_1:76838513-76838532 | None:intergenic | 40.0% |
| TTCATCAACCGAGATAGTGA+TGG | + | chr1_1:76838531-76838550 | None:intergenic | 40.0% | |
| !! | ATCACTATCTCGGTTGATGA+AGG | - | chr1_1:76838530-76838549 | Msa0045130:intron | 40.0% |
| CTGTATGCAACTTATGCCAT+TGG | - | chr1_1:76838833-76838852 | Msa0045130:intron | 40.0% | |
| TGCAACTTATGCCATTGGAA+AGG | - | chr1_1:76838838-76838857 | Msa0045130:intron | 40.0% | |
| !! | AGAAGAAGCACTTTCATCTG+AGG | - | chr1_1:76838889-76838908 | Msa0045130:intron | 40.0% |
| ! | ACGGTTGTATCTGGAATTTC+TGG | - | chr1_1:76839018-76839037 | Msa0045130:intron | 40.0% |
| ! | GAATATATTGCAGGTGTCGT+AGG | + | chr1_1:76839077-76839096 | None:intergenic | 40.0% |
| ATCTTGCATGGACTTTACTC+CGG | - | chr1_1:76839107-76839126 | Msa0045130:intron | 40.0% | |
| ! | TACGATGAAGAAGTACACGA+GGG | + | chr1_1:76839138-76839157 | None:intergenic | 40.0% |
| ! | ATACGATGAAGAAGTACACG+AGG | + | chr1_1:76839139-76839158 | None:intergenic | 40.0% |
| GTAAAACTGGTCAAGAGTCT+TGG | + | chr1_1:76839167-76839186 | None:intergenic | 40.0% | |
| GATAGAACAAATGCGGACTT+AGG | + | chr1_1:76839299-76839318 | None:intergenic | 40.0% | |
| CTGAACAGGCTCAAAATATG+AGG | + | chr1_1:76839360-76839379 | None:intergenic | 40.0% | |
| TTCTTTCGGACTAACTGAAC+AGG | + | chr1_1:76839374-76839393 | None:intergenic | 40.0% | |
| ACATCTACGGGTTCTTCTTT+CGG | + | chr1_1:76839388-76839407 | None:intergenic | 40.0% | |
| TACTTGTGTTGCACACAGTT+TGG | - | chr1_1:76839451-76839470 | Msa0045130:intron | 40.0% | |
| ACTTGTGTTGCACACAGTTT+GGG | - | chr1_1:76839452-76839471 | Msa0045130:intron | 40.0% | |
| ! | TTTGGGATGGTTGGAATTTG+TGG | - | chr1_1:76839469-76839488 | Msa0045130:intron | 40.0% |
| !!! | CTTTTTTAGTCTGGGGAATC+TGG | - | chr1_1:76839647-76839666 | Msa0045130:five_prime_UTR | 40.0% |
| ! | ATGACTGTGTCTGGAGTTAC+CGG | - | chr1_1:76833971-76833990 | Msa0045130:three_prime_UTR | 45.0% |
| CTCAAGAATGACCAATGGTC+CGG | + | chr1_1:76833993-76834012 | None:intergenic | 45.0% | |
| GGACAAGTTCTCGAGATTGA+TGG | - | chr1_1:76834181-76834200 | Msa0045130:three_prime_UTR | 45.0% | |
| !! | TCTCGAGATTGATGGCGAAA+AGG | - | chr1_1:76834189-76834208 | Msa0045130:three_prime_UTR | 45.0% |
| CACATAATTGAGCCGATGGT+TGG | - | chr1_1:76834720-76834739 | Msa0045130:CDS | 45.0% | |
| !! | ATTATCTGGGACGGTTTGGT+AGG | + | chr1_1:76834765-76834784 | None:intergenic | 45.0% |
| !! | ACAGCAGTTTTGGCATGCTT+AGG | + | chr1_1:76834820-76834839 | None:intergenic | 45.0% |
| TGACATGCAACACAGTCTGA+CGG | + | chr1_1:76834849-76834868 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr1_1:76835083-76835102 | None:intergenic | 45.0% |
| TGTAAACAAGAGAGGGACAG+AGG | + | chr1_1:76835549-76835568 | None:intergenic | 45.0% | |
| CCTACGGATGTAAACAAGAG+AGG | + | chr1_1:76835557-76835576 | None:intergenic | 45.0% | |
| ! | CCTCTCTTGTTTACATCCGT+AGG | - | chr1_1:76835554-76835573 | Msa0045130:intron | 45.0% |
| CCAAGCATGTCCAATGATAC+AGG | + | chr1_1:76835591-76835610 | None:intergenic | 45.0% | |
| CCTGTATCATTGGACATGCT+TGG | - | chr1_1:76835588-76835607 | Msa0045130:intron | 45.0% | |
| TATCATTGGACATGCTTGGG+CGG | - | chr1_1:76835592-76835611 | Msa0045130:intron | 45.0% | |
| GGTTCTATCACTAGGGTTGA+CGG | + | chr1_1:76835769-76835788 | None:intergenic | 45.0% | |
| CTGTATCATCTCCTCAGGAT+AGG | + | chr1_1:76835790-76835809 | None:intergenic | 45.0% | |
| ! | ATCCCTCTATTTTCAGCTGC+CGG | - | chr1_1:76835861-76835880 | Msa0045130:CDS | 45.0% |
| CGATAAGGTTACTGTGCTGA+AGG | - | chr1_1:76836160-76836179 | Msa0045130:intron | 45.0% | |
| TGCAGCTATGGGAGTTAACA+TGG | - | chr1_1:76836570-76836589 | Msa0045130:intron | 45.0% | |
| ! | AAGCGTGACTTTGAGGAGAA+TGG | - | chr1_1:76836610-76836629 | Msa0045130:intron | 45.0% |
| ! | CTTTGAGGAGAATGGCTCAA+TGG | - | chr1_1:76836618-76836637 | Msa0045130:intron | 45.0% |
| CCCTACACTTCACATGTGTT+TGG | + | chr1_1:76836996-76837015 | None:intergenic | 45.0% | |
| GCAGTAGTAAGAGCAATACG+AGG | + | chr1_1:76837291-76837310 | None:intergenic | 45.0% | |
| TTATGCTGATGCTCTTCGTG+AGG | - | chr1_1:76837371-76837390 | Msa0045130:intron | 45.0% | |
| TGAACATGCCGGAAGAATTG+AGG | - | chr1_1:76837696-76837715 | Msa0045130:CDS | 45.0% | |
| GAACATGCCGGAAGAATTGA+GGG | - | chr1_1:76837697-76837716 | Msa0045130:CDS | 45.0% | |
| AACATGCCGGAAGAATTGAG+GGG | - | chr1_1:76837698-76837717 | Msa0045130:CDS | 45.0% | |
| TTTACGCCCCTCAATTCTTC+CGG | + | chr1_1:76837707-76837726 | None:intergenic | 45.0% | |
| CTGTCCCTCCGTAATATATC+TGG | + | chr1_1:76837894-76837913 | None:intergenic | 45.0% | |
| GCAGTTGCATAATAGACAGG+TGG | - | chr1_1:76837928-76837947 | Msa0045130:CDS | 45.0% | |
| TGGCTTATGGCATTCATCAC+AGG | + | chr1_1:76837972-76837991 | None:intergenic | 45.0% | |
| TCATTCTGATGTGTCCAACC+AGG | - | chr1_1:76838696-76838715 | Msa0045130:intron | 45.0% | |
| CAAACAAGAAGAGACCTGGT+TGG | + | chr1_1:76838713-76838732 | None:intergenic | 45.0% | |
| GGAACAAACAAGAAGAGACC+TGG | + | chr1_1:76838717-76838736 | None:intergenic | 45.0% | |
| TCCAGTCTCTAGATCTTGCA+TGG | - | chr1_1:76839095-76839114 | Msa0045130:CDS | 45.0% | |
| TCCATGCAAGATCTAGAGAC+TGG | + | chr1_1:76839099-76839118 | None:intergenic | 45.0% | |
| GAAGTACACGAGGGAAAATC+CGG | + | chr1_1:76839129-76839148 | None:intergenic | 45.0% | |
| GCTGATTGAGCAAGAGACTA+AGG | + | chr1_1:76839234-76839253 | None:intergenic | 45.0% | |
| TCAATCAGCGCCTAATGTCA+TGG | - | chr1_1:76839245-76839264 | Msa0045130:intron | 45.0% | |
| CAATCAGCGCCTAATGTCAT+GGG | - | chr1_1:76839246-76839265 | Msa0045130:intron | 45.0% | |
| GTTTAGGCGATGGAACTACC+CGG | - | chr1_1:76834155-76834174 | Msa0045130:three_prime_UTR | 50.0% | |
| TCTCGAGAACTTGTCCATGC+CGG | + | chr1_1:76834177-76834196 | None:intergenic | 50.0% | |
| TGGCGAAAAGGCTGTTGTTC+AGG | - | chr1_1:76834201-76834220 | Msa0045130:three_prime_UTR | 50.0% | |
| GACCGTACAGTTTACTGGAG+AGG | - | chr1_1:76834498-76834517 | Msa0045130:three_prime_UTR | 50.0% | |
| ! | ACGGGGGATAACAGCAGTTT+TGG | + | chr1_1:76834830-76834849 | None:intergenic | 50.0% |
| ACATGCAACACAGTCTGACG+GGG | + | chr1_1:76834847-76834866 | None:intergenic | 50.0% | |
| GACATGCAACACAGTCTGAC+GGG | + | chr1_1:76834848-76834867 | None:intergenic | 50.0% | |
| ! | TTCTGGAGGGGGAATTTCTC+AGG | - | chr1_1:76835360-76835379 | Msa0045130:intron | 50.0% |
| ATTGCAGAGGAACGGAGGAT+GGG | + | chr1_1:76835408-76835427 | None:intergenic | 50.0% | |
| AATTGCAGAGGAACGGAGGA+TGG | + | chr1_1:76835409-76835428 | None:intergenic | 50.0% | |
| GCTAAATTGCAGAGGAACGG+AGG | + | chr1_1:76835413-76835432 | None:intergenic | 50.0% | |
| GGGCGGATATTTAACGGTTC+TGG | - | chr1_1:76835609-76835628 | Msa0045130:intron | 50.0% | |
| CCAGTCTGTATCATCTCCTC+AGG | + | chr1_1:76835795-76835814 | None:intergenic | 50.0% | |
| CCTGAGGAGATGATACAGAC+TGG | - | chr1_1:76835792-76835811 | Msa0045130:intron | 50.0% | |
| GACCGGCAGCTGAAAATAGA+GGG | + | chr1_1:76835866-76835885 | None:intergenic | 50.0% | |
| AGACCGGCAGCTGAAAATAG+AGG | + | chr1_1:76835867-76835886 | None:intergenic | 50.0% | |
| TGCTGCACAGATTTGTCGTC+AGG | - | chr1_1:76835902-76835921 | Msa0045130:CDS | 50.0% | |
| TCTTGATTTATGCAGGGGGG+AGG | - | chr1_1:76836520-76836539 | Msa0045130:intron | 50.0% | |
| ! | GGAAGAATTGAGGGGCGTAA+AGG | - | chr1_1:76837706-76837725 | Msa0045130:CDS | 50.0% |
| ! | TCACCACTGCAGAGTGCTAT+TGG | - | chr1_1:76838652-76838671 | Msa0045130:intron | 50.0% |
| ! | CACCACTGCAGAGTGCTATT+GGG | - | chr1_1:76838653-76838672 | Msa0045130:intron | 50.0% |
| ! | ACCACTGCAGAGTGCTATTG+GGG | - | chr1_1:76838654-76838673 | Msa0045130:intron | 50.0% |
| TGGGGAGGGAATGACTAGAA+AGG | - | chr1_1:76838672-76838691 | Msa0045130:intron | 50.0% | |
| TGCCATTGGAAAGGATGTCC+AGG | - | chr1_1:76838847-76838866 | Msa0045130:intron | 50.0% | |
| TGCCTGGACATCCTTTCCAA+TGG | + | chr1_1:76838852-76838871 | None:intergenic | 50.0% | |
| CAACGACAGCTTTCATTGCC+TGG | + | chr1_1:76838868-76838887 | None:intergenic | 50.0% | |
| CAGGCAATGAAAGCTGTCGT+TGG | - | chr1_1:76838866-76838885 | Msa0045130:intron | 50.0% | |
| !! | TGAGAGGAAGTTTGTTGCCC+AGG | - | chr1_1:76839048-76839067 | Msa0045130:intron | 50.0% |
| !! | GAGAGGAAGTTTGTTGCCCA+GGG | - | chr1_1:76839049-76839068 | Msa0045130:intron | 50.0% |
| AACTGGTCAAGAGTCTTGGC+TGG | + | chr1_1:76839163-76839182 | None:intergenic | 50.0% | |
| CAGCATCTCGGCTGTAAAAC+TGG | + | chr1_1:76839180-76839199 | None:intergenic | 50.0% | |
| ! | CAGTTTTACAGCCGAGATGC+TGG | - | chr1_1:76839178-76839197 | Msa0045130:intron | 50.0% |
| GTGTTGCACACAGTTTGGGA+TGG | - | chr1_1:76839456-76839475 | Msa0045130:intron | 50.0% | |
| ! | TGCACACAGTTTGGGATGGT+TGG | - | chr1_1:76839460-76839479 | Msa0045130:intron | 50.0% |
| ! | GTCTGGAGTTACCGGACCAT+TGG | - | chr1_1:76833979-76833998 | Msa0045130:three_prime_UTR | 55.0% |
| CTCGAGAACTTGTCCATGCC+GGG | + | chr1_1:76834176-76834195 | None:intergenic | 55.0% | |
| CATGCAACACAGTCTGACGG+GGG | + | chr1_1:76834846-76834865 | None:intergenic | 55.0% | |
| AGAGGGACAGAGGAAGTCAG+AGG | + | chr1_1:76835539-76835558 | None:intergenic | 55.0% | |
| GCACAGATTTGTCGTCAGGC+TGG | - | chr1_1:76835906-76835925 | Msa0045130:CDS | 55.0% | |
| CTCTGGCAGCAGATACCTGT+AGG | + | chr1_1:76837615-76837634 | None:intergenic | 55.0% | |
| GGTATCTGCTGCCAGAGAAG+AGG | - | chr1_1:76837618-76837637 | Msa0045130:CDS | 55.0% | |
| TCTTCCTGGCACCTCTTCTC+TGG | + | chr1_1:76837632-76837651 | None:intergenic | 55.0% | |
| CCAGGATAACCACGTCTTCC+TGG | + | chr1_1:76837646-76837665 | None:intergenic | 55.0% | |
| CCAGGAAGACGTGGTTATCC+TGG | - | chr1_1:76837643-76837662 | Msa0045130:CDS | 55.0% | |
| TCCCCAATAGCACTCTGCAG+TGG | + | chr1_1:76838658-76838677 | None:intergenic | 55.0% | |
| ! | ACTGCAGAGTGCTATTGGGG+AGG | - | chr1_1:76838657-76838676 | Msa0045130:intron | 55.0% |
| ! | CTGCAGAGTGCTATTGGGGA+GGG | - | chr1_1:76838658-76838677 | Msa0045130:intron | 55.0% |
| GGGACAGAGGAAGTCAGAGG+TGG | + | chr1_1:76835536-76835555 | None:intergenic | 60.0% | |
| !! | GAAGAGGTGCCAGGAAGACG+TGG | - | chr1_1:76837634-76837653 | Msa0045130:CDS | 60.0% |
| GGCGATGGAACTACCCGGCA+TGG | - | chr1_1:76834160-76834179 | Msa0045130:three_prime_UTR | 65.0% | |
| !! | GCTGCCAGAGAAGAGGTGCC+AGG | - | chr1_1:76837625-76837644 | Msa0045130:CDS | 65.0% |
| ! | GCAGGTGTCGTAGGCTCCCT+GGG | + | chr1_1:76839068-76839087 | None:intergenic | 65.0% |
| ! | TGCAGGTGTCGTAGGCTCCC+TGG | + | chr1_1:76839069-76839088 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 76833913 | 76839671 | 76833913 | ID=Msa0045130;Name=Msa0045130 |
| chr1_1 | mRNA | 76833913 | 76839671 | 76833913 | ID=Msa0045130-mRNA-1;Parent=Msa0045130;Name=Msa0045130-mRNA-1;_AED=0.23;_eAED=0.23;_QI=28|1|1|1|1|1|12|653|444 |
| chr1_1 | exon | 76833913 | 76834751 | 76833913 | ID=Msa0045130-mRNA-1:exon:26207;Parent=Msa0045130-mRNA-1 |
| chr1_1 | exon | 76834867 | 76834920 | 76834867 | ID=Msa0045130-mRNA-1:exon:26206;Parent=Msa0045130-mRNA-1 |
| chr1_1 | exon | 76835033 | 76835080 | 76835033 | ID=Msa0045130-mRNA-1:exon:26205;Parent=Msa0045130-mRNA-1 |
| chr1_1 | exon | 76835638 | 76835720 | 76835638 | ID=Msa0045130-mRNA-1:exon:26204;Parent=Msa0045130-mRNA-1 |
| chr1_1 | exon | 76835815 | 76835965 | 76835815 | ID=Msa0045130-mRNA-1:exon:26203;Parent=Msa0045130-mRNA-1 |
| chr1_1 | exon | 76836192 | 76836329 | 76836192 | ID=Msa0045130-mRNA-1:exon:26202;Parent=Msa0045130-mRNA-1 |
| chr1_1 | exon | 76836918 | 76837049 | 76836918 | ID=Msa0045130-mRNA-1:exon:26201;Parent=Msa0045130-mRNA-1 |
| chr1_1 | exon | 76837616 | 76837824 | 76837616 | ID=Msa0045130-mRNA-1:exon:26200;Parent=Msa0045130-mRNA-1 |
| chr1_1 | exon | 76837915 | 76838008 | 76837915 | ID=Msa0045130-mRNA-1:exon:26199;Parent=Msa0045130-mRNA-1 |
| chr1_1 | exon | 76839065 | 76839124 | 76839065 | ID=Msa0045130-mRNA-1:exon:26198;Parent=Msa0045130-mRNA-1 |
| chr1_1 | exon | 76839362 | 76839460 | 76839362 | ID=Msa0045130-mRNA-1:exon:26197;Parent=Msa0045130-mRNA-1 |
| chr1_1 | exon | 76839563 | 76839671 | 76839563 | ID=Msa0045130-mRNA-1:exon:26196;Parent=Msa0045130-mRNA-1 |
| chr1_1 | five_prime_UTR | 76839644 | 76839671 | 76839644 | ID=Msa0045130-mRNA-1:five_prime_utr;Parent=Msa0045130-mRNA-1 |
| chr1_1 | CDS | 76839563 | 76839643 | 76839563 | ID=Msa0045130-mRNA-1:cds;Parent=Msa0045130-mRNA-1 |
| chr1_1 | CDS | 76839362 | 76839460 | 76839362 | ID=Msa0045130-mRNA-1:cds;Parent=Msa0045130-mRNA-1 |
| chr1_1 | CDS | 76839065 | 76839124 | 76839065 | ID=Msa0045130-mRNA-1:cds;Parent=Msa0045130-mRNA-1 |
| chr1_1 | CDS | 76837915 | 76838008 | 76837915 | ID=Msa0045130-mRNA-1:cds;Parent=Msa0045130-mRNA-1 |
| chr1_1 | CDS | 76837616 | 76837824 | 76837616 | ID=Msa0045130-mRNA-1:cds;Parent=Msa0045130-mRNA-1 |
| chr1_1 | CDS | 76836918 | 76837049 | 76836918 | ID=Msa0045130-mRNA-1:cds;Parent=Msa0045130-mRNA-1 |
| chr1_1 | CDS | 76836192 | 76836329 | 76836192 | ID=Msa0045130-mRNA-1:cds;Parent=Msa0045130-mRNA-1 |
| chr1_1 | CDS | 76835815 | 76835965 | 76835815 | ID=Msa0045130-mRNA-1:cds;Parent=Msa0045130-mRNA-1 |
| chr1_1 | CDS | 76835638 | 76835720 | 76835638 | ID=Msa0045130-mRNA-1:cds;Parent=Msa0045130-mRNA-1 |
| chr1_1 | CDS | 76835033 | 76835080 | 76835033 | ID=Msa0045130-mRNA-1:cds;Parent=Msa0045130-mRNA-1 |
| chr1_1 | CDS | 76834867 | 76834920 | 76834867 | ID=Msa0045130-mRNA-1:cds;Parent=Msa0045130-mRNA-1 |
| chr1_1 | CDS | 76834566 | 76834751 | 76834566 | ID=Msa0045130-mRNA-1:cds;Parent=Msa0045130-mRNA-1 |
| chr1_1 | three_prime_UTR | 76833913 | 76834565 | 76833913 | ID=Msa0045130-mRNA-1:three_prime_utr;Parent=Msa0045130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
