AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0046130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0046130 MtrunA17_Chr1g0212961 89.125 377 11 1 1 377 1 347 0.0 675
Msa0046130 MtrunA17_Chr3g0136711 59.596 297 81 4 75 367 19 280 1.87e-121 353
Msa0046130 MtrunA17_Chr1g0150451 51.213 371 128 8 1 367 2 323 9.88e-121 352
Msa0046130 MtrunA17_Chr3g0126511 46.649 373 142 7 3 368 19 341 3.33e-104 311
Msa0046130 MtrunA17_Chr8g0360351 38.851 296 138 8 79 367 22 281 3.16e-59 193
Msa0046130 MtrunA17_Chr2g0279151 37.075 294 141 8 86 367 19 280 4.19e-58 190
Msa0046130 MtrunA17_Chr4g0050381 40.214 281 129 7 94 367 28 276 9.14e-58 189
Msa0046130 MtrunA17_Chr3g0115851 37.809 283 137 7 92 367 31 281 3.15e-56 185
Msa0046130 MtrunA17_Chr5g0426141 39.223 283 133 7 92 367 31 281 1.84e-55 183
Msa0046130 MtrunA17_Chr2g0317021 37.162 296 143 8 79 367 73 332 7.64e-55 183
Msa0046130 MtrunA17_Chr4g0051661 35.587 281 143 7 93 367 149 397 2.09e-47 166
Msa0046130 MtrunA17_Chr5g0430481 35.439 285 137 8 97 367 123 374 2.91e-47 165
Msa0046130 MtrunA17_Chr3g0105371 34.276 283 143 7 97 367 87 338 1.55e-46 162
Msa0046130 MtrunA17_Chr3g0105351 33.569 283 145 7 97 367 63 314 2.81e-45 158
Msa0046130 MtrunA17_Chr3g0112291 34.615 312 157 8 96 377 93 387 4.25e-39 143
Msa0046130 MtrunA17_Chr2g0299981 32.174 345 131 9 96 367 221 535 2.18e-38 144
Msa0046130 MtrunA17_Chr4g0070871 31.662 379 160 14 47 365 162 501 3.17e-38 143
Msa0046130 MtrunA17_Chr5g0407161 34.564 298 139 10 97 371 87 351 1.49e-37 139
Msa0046130 MtrunA17_Chr5g0435721 35.659 258 118 5 96 335 193 420 3.48e-37 140
Msa0046130 MtrunA17_Chr1g0171571 33.562 292 147 7 94 369 386 646 9.16e-37 140
Msa0046130 MtrunA17_Chr8g0389921 29.444 360 167 10 51 365 115 432 2.29e-36 137
Msa0046130 MtrunA17_Chr1g0150781 31.579 342 132 10 96 370 240 546 2.91e-36 138
Msa0046130 MtrunA17_Chr3g0135961 33.121 314 159 8 96 365 231 537 2.31e-35 136
Msa0046130 MtrunA17_Chr4g0065141 35.526 228 126 5 162 371 130 354 3.56e-34 130
Msa0046130 MtrunA17_Chr5g0396731 31.935 310 145 12 95 368 72 351 2.20e-33 127
Msa0046130 MtrunA17_Chr3g0144111 40.625 192 98 7 193 371 43 231 1.40e-32 122
Msa0046130 MtrunA17_Chr1g0158781 35.762 302 129 10 94 365 111 377 2.55e-32 125
Msa0046130 MtrunA17_Chr2g0293811 35.683 227 120 7 162 365 106 329 4.15e-32 124
Msa0046130 MtrunA17_Chr1g0194191 34.361 227 123 7 162 365 124 347 1.50e-31 123
Msa0046130 MtrunA17_Chr3g0138281 35.398 226 127 6 162 371 127 349 5.56e-31 121
Msa0046130 MtrunA17_Chr6g0483411 36.017 236 119 9 162 367 85 318 4.32e-29 115
Msa0046130 MtrunA17_Chr3g0136811 31.975 319 167 14 91 367 19 329 9.77e-27 109
Msa0046130 MtrunA17_Chr4g0001761 31.562 320 166 14 91 367 19 328 3.96e-26 107
Msa0046130 MtrunA17_Chr1g0150071 30.031 323 168 12 91 367 19 329 1.30e-24 103
Msa0046130 MtrunA17_Chr7g0272061 29.393 313 176 12 71 351 39 338 2.55e-23 100
Msa0046130 MtrunA17_Chr4g0067711 31.802 283 153 13 122 373 87 360 4.03e-23 99.4
Msa0046130 MtrunA17_Chr1g0209451 33.906 233 128 12 162 372 74 302 3.02e-22 97.4
Msa0046130 MtrunA17_Chr3g0127091 26.543 324 149 10 94 364 59 346 4.73e-22 96.7
Msa0046130 MtrunA17_Chr1g0207571 28.975 283 130 9 162 376 67 346 5.99e-22 96.3
Msa0046130 MtrunA17_Chr7g0263281 27.839 273 128 8 162 368 77 346 2.43e-21 94.4
Msa0046130 MtrunA17_Chr2g0295401 32.701 211 111 9 191 372 150 358 2.87e-21 94.0
Msa0046130 MtrunA17_Chr8g0371321 30.508 236 114 8 162 351 85 316 1.11e-20 92.8
Msa0046130 MtrunA17_Chr1g0213351 28.014 282 131 10 162 375 86 363 1.34e-20 92.4
Msa0046130 MtrunA17_Chr1g0192421 38.854 157 77 6 213 351 172 327 1.42e-20 91.7
Msa0046130 MtrunA17_Chr1g0211251 29.565 230 113 7 162 345 87 313 1.58e-20 92.4
Msa0046130 MtrunA17_Chr1g0153671 34.498 229 128 10 162 370 71 297 6.47e-20 90.9
Msa0046130 MtrunA17_Chr6g0486661 28.136 295 134 12 126 372 124 388 4.66e-19 89.4
Msa0046130 MtrunA17_Chr7g0271971 32.189 233 132 10 162 371 74 303 4.96e-19 88.2
Msa0046130 MtrunA17_Chr7g0225501 33.188 229 125 11 162 365 92 317 7.41e-19 87.8
Msa0046130 MtrunA17_Chr3g0133801 30.242 248 143 11 150 370 54 298 8.82e-19 87.4
Msa0046130 MtrunA17_Chr7g0243571 30.918 207 113 8 193 371 164 368 2.29e-18 86.3
Msa0046130 MtrunA17_Chr3g0089711 29.741 232 114 8 162 347 74 302 2.61e-18 85.5
Msa0046130 MtrunA17_Chr7g0256751 28.571 245 130 10 162 362 75 318 3.77e-18 85.5
Msa0046130 MtrunA17_Chr4g0022171 33.161 193 106 7 181 351 156 347 4.10e-18 85.5
Msa0046130 MtrunA17_Chr1g0192471 30.568 229 135 9 162 369 74 299 4.79e-18 85.1
Msa0046130 MtrunA17_Chr4g0068971 39.370 127 63 4 254 369 110 233 7.13e-18 82.8
Msa0046130 MtrunA17_Chr3g0089721 29.310 232 115 7 162 347 74 302 1.03e-17 83.6
Msa0046130 MtrunA17_Chr7g0250061 28.390 236 119 8 162 351 82 313 1.04e-17 84.0
Msa0046130 MtrunA17_Chr1g0181901 28.899 218 112 7 162 336 82 299 1.19e-17 84.0
Msa0046130 MtrunA17_Chr1g0151781 35.366 164 85 6 191 334 126 288 3.12e-17 82.0
Msa0046130 MtrunA17_Chr7g0221691 30.769 260 143 11 126 351 129 385 3.96e-17 82.4
Msa0046130 MtrunA17_Chr2g0324061 35.503 169 79 7 191 334 160 323 1.17e-16 81.3
Msa0046130 MtrunA17_Chr1g0187481 25.359 209 133 5 165 368 88 278 1.49e-16 79.0
Msa0046130 MtrunA17_Chr4g0004971 32.484 157 87 6 213 351 165 320 1.78e-16 80.1
Msa0046130 MtrunA17_Chr7g0249421 30.769 208 117 7 184 365 174 380 4.72e-16 79.3
Msa0046130 MtrunA17_Chr2g0294291 27.615 239 128 8 162 356 81 318 5.47e-16 78.6
Msa0046130 MtrunA17_Chr7g0256771 30.357 224 105 10 162 338 76 295 2.39e-15 76.3
Msa0046130 MtrunA17_Chr1g0166481 26.442 208 128 6 165 368 88 274 1.40e-14 73.2
Msa0046130 MtrunA17_Chr8g0342431 30.682 176 101 6 194 351 177 349 2.04e-13 71.2
Msa0046130 MtrunA17_Chr4g0063111 26.033 242 132 11 162 361 80 316 6.83e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0046130 AT1G43900.1 63.279 305 79 2 67 368 95 369 9.19e-139 400
Msa0046130 AT4G31750.2 57.912 297 86 4 75 367 18 279 5.13e-117 342
Msa0046130 AT4G31750.1 57.912 297 86 4 75 367 18 279 8.17e-117 342
Msa0046130 AT4G31750.3 57.912 297 86 4 75 367 18 279 8.17e-117 342
Msa0046130 AT5G24940.1 58.362 293 83 4 79 367 22 279 4.52e-116 345
Msa0046130 AT5G10740.1 54.375 320 95 5 52 367 7 279 4.14e-115 339
Msa0046130 AT5G10740.2 54.375 320 95 5 52 367 7 279 4.14e-115 339
Msa0046130 AT5G53140.1 50.993 302 110 4 70 367 80 347 1.61e-101 307
Msa0046130 AT5G53140.2 50.993 302 110 4 70 367 80 347 1.61e-101 307
Msa0046130 AT2G20630.1 40.741 297 129 8 86 367 14 278 6.41e-63 203
Msa0046130 AT2G20630.2 40.067 297 131 8 86 367 14 278 2.12e-60 197
Msa0046130 AT4G28400.3 39.146 281 132 7 94 367 12 260 9.62e-60 194
Msa0046130 AT4G28400.1 39.146 281 132 7 94 367 34 282 1.41e-59 194
Msa0046130 AT1G78200.1 38.889 288 136 7 90 367 25 282 7.27e-58 190
Msa0046130 AT1G78200.3 38.889 288 136 7 90 367 25 282 7.27e-58 190
Msa0046130 AT1G78200.2 38.889 288 136 7 90 367 25 282 7.27e-58 190
Msa0046130 AT1G34750.2 36.538 312 158 8 64 367 2 281 2.34e-57 189
Msa0046130 AT1G34750.1 36.538 312 158 8 64 367 2 281 2.34e-57 189
Msa0046130 AT1G34750.3 36.538 312 158 8 64 367 2 281 2.34e-57 189
Msa0046130 AT3G15260.2 39.007 282 133 7 93 367 39 288 4.51e-54 180
Msa0046130 AT3G15260.1 39.007 282 133 7 93 367 39 288 4.51e-54 180
Msa0046130 AT1G78200.5 37.828 267 129 5 108 367 1 237 2.81e-53 177
Msa0046130 AT1G78200.4 37.828 267 129 5 108 367 1 237 2.81e-53 177
Msa0046130 AT1G22280.1 37.102 283 139 7 92 367 30 280 4.61e-51 172
Msa0046130 AT1G22280.3 36.332 289 139 8 92 367 30 286 1.64e-48 166
Msa0046130 AT2G34740.1 37.993 279 134 8 96 367 88 334 7.81e-48 166
Msa0046130 AT2G30020.1 35.689 283 137 7 97 365 139 390 1.78e-43 155
Msa0046130 AT1G34750.4 36.059 269 132 8 64 324 2 238 2.58e-43 151
Msa0046130 AT4G28400.2 38.235 238 108 7 94 324 34 239 7.96e-43 150
Msa0046130 AT1G67820.2 38.095 273 122 8 90 351 74 310 2.20e-42 153
Msa0046130 AT2G29380.1 37.374 297 143 8 96 365 78 358 2.43e-42 152
Msa0046130 AT1G67820.1 38.095 273 122 8 90 351 110 346 4.88e-42 153
Msa0046130 AT1G07160.1 34.021 291 136 9 97 367 122 376 2.42e-41 149
Msa0046130 AT4G26080.1 33.537 328 134 10 96 370 129 425 5.27e-41 150
Msa0046130 AT2G40180.1 32.881 295 137 8 96 367 129 385 4.42e-40 146
Msa0046130 AT2G33700.1 38.117 223 122 7 162 371 129 348 2.96e-39 144
Msa0046130 AT3G51470.2 36.552 290 135 9 97 370 30 286 4.28e-39 142
Msa0046130 AT3G51470.1 36.552 290 135 9 97 370 74 330 7.28e-39 142
Msa0046130 AT5G59220.1 34.733 262 119 4 96 335 112 343 7.06e-38 141
Msa0046130 AT5G57050.2 34.545 330 123 13 96 365 73 369 2.05e-37 139
Msa0046130 AT1G07430.1 35.600 250 142 6 93 335 118 355 2.36e-37 140
Msa0046130 AT5G57050.1 34.545 330 123 13 96 365 113 409 2.45e-37 140
Msa0046130 AT3G11410.1 35.510 245 145 7 97 335 106 343 9.71e-36 135
Msa0046130 AT5G51760.2 44.565 184 75 2 209 365 196 379 1.20e-35 134
Msa0046130 AT3G62260.3 36.522 230 119 7 162 367 33 259 1.52e-35 132
Msa0046130 AT5G51760.1 44.565 184 75 2 209 365 226 409 1.96e-35 134
Msa0046130 AT2G25620.1 35.652 230 125 5 162 371 134 360 4.02e-35 133
Msa0046130 AT2G25620.2 35.652 230 125 5 162 371 134 360 4.02e-35 133
Msa0046130 AT3G62260.1 36.522 230 119 7 162 367 122 348 7.01e-35 132
Msa0046130 AT3G62260.2 36.522 230 119 7 162 367 123 349 7.83e-35 132
Msa0046130 AT2G40860.1 32.881 295 144 8 94 369 391 650 8.73e-35 135
Msa0046130 AT2G34740.3 36.667 240 113 8 96 328 84 291 9.31e-35 130
Msa0046130 AT2G34740.2 36.667 240 113 8 96 328 102 309 9.93e-35 130
Msa0046130 AT2G40860.4 32.881 295 144 8 94 369 293 552 1.37e-34 134
Msa0046130 AT1G48040.1 36.709 237 122 8 162 373 122 355 5.55e-32 124
Msa0046130 AT1G72770.4 28.497 386 158 12 57 365 155 499 4.07e-31 124
Msa0046130 AT1G72770.1 28.497 386 158 12 57 365 155 499 4.07e-31 124
Msa0046130 AT1G72770.3 28.497 386 158 12 57 365 155 499 4.07e-31 124
Msa0046130 AT1G17550.1 29.885 348 129 11 96 365 189 499 4.81e-31 124
Msa0046130 AT1G17550.2 29.885 348 129 11 96 365 189 499 4.81e-31 124
Msa0046130 AT3G17250.1 34.177 237 126 8 162 371 164 397 6.59e-31 122
Msa0046130 AT2G40860.2 31.429 280 138 8 94 354 391 635 6.69e-29 118
Msa0046130 AT2G25070.1 30.488 328 177 15 90 374 18 337 3.35e-27 110
Msa0046130 AT2G25070.2 30.488 328 177 15 90 374 18 337 3.35e-27 110
Msa0046130 AT1G18030.1 34.322 236 123 9 162 367 115 348 1.08e-26 109
Msa0046130 AT4G31860.1 30.793 328 176 15 90 374 18 337 2.19e-25 105
Msa0046130 AT3G16800.4 34.783 207 107 7 191 369 49 255 3.07e-25 103
Msa0046130 AT3G16800.6 34.783 207 107 7 191 369 49 255 3.07e-25 103
Msa0046130 AT3G16800.2 34.783 207 107 7 191 369 144 350 1.36e-24 103
Msa0046130 AT3G16800.1 34.783 207 107 7 191 369 144 350 1.36e-24 103
Msa0046130 AT3G16800.3 34.783 207 107 7 191 369 144 350 1.36e-24 103
Msa0046130 AT5G02760.1 29.856 278 128 9 162 375 78 352 1.43e-24 103
Msa0046130 AT4G27800.1 28.086 324 144 10 94 364 58 345 1.05e-23 101
Msa0046130 AT5G27930.1 32.114 246 116 11 152 351 91 331 1.12e-22 98.6
Msa0046130 AT5G27930.2 32.114 246 116 11 152 351 91 331 1.12e-22 98.6
Msa0046130 AT4G31860.3 31.655 278 149 13 91 335 19 288 1.54e-22 96.7
Msa0046130 AT4G08260.1 32.701 211 106 6 162 365 25 206 1.98e-22 94.7
Msa0046130 AT1G09160.2 31.878 229 132 10 162 369 74 299 2.85e-22 98.2
Msa0046130 AT1G09160.1 31.878 229 132 10 162 369 74 299 2.85e-22 98.2
Msa0046130 AT3G05640.2 37.569 181 87 7 212 367 170 349 8.95e-22 95.9
Msa0046130 AT3G05640.1 37.569 181 87 7 212 367 170 349 8.95e-22 95.9
Msa0046130 AT3G05640.3 37.569 181 87 7 212 367 170 349 8.95e-22 95.9
Msa0046130 AT1G68410.4 32.035 231 135 9 162 372 79 307 9.67e-22 96.7
Msa0046130 AT1G68410.3 32.035 231 135 9 162 372 79 307 9.67e-22 96.7
Msa0046130 AT1G68410.1 32.035 231 135 9 162 372 79 307 9.67e-22 96.7
Msa0046130 AT1G68410.2 32.035 231 135 9 162 372 79 307 9.67e-22 96.7
Msa0046130 AT3G51370.1 29.461 241 120 8 162 356 85 321 1.84e-21 95.1
Msa0046130 AT3G51370.3 29.461 241 120 8 162 356 85 321 1.84e-21 95.1
Msa0046130 AT5G57050.3 34.783 230 84 11 96 292 113 309 3.67e-21 93.2
Msa0046130 AT1G22280.2 32.787 183 87 5 92 270 30 180 6.12e-21 90.1
Msa0046130 AT4G27800.3 28.425 292 124 9 94 336 58 313 8.00e-21 92.4
Msa0046130 AT4G27800.2 28.425 292 124 9 94 336 58 313 9.89e-21 92.4
Msa0046130 AT1G18030.2 34.574 188 96 7 162 324 115 300 1.33e-20 91.7
Msa0046130 AT4G32950.1 34.513 226 120 10 153 353 72 294 5.17e-20 90.1
Msa0046130 AT3G63340.12 31.224 237 101 8 191 365 207 443 6.70e-20 91.7
Msa0046130 AT4G31860.2 32.453 265 138 13 91 322 19 275 7.78e-20 89.0
Msa0046130 AT5G59220.2 30.698 215 98 3 96 289 112 296 7.92e-20 89.4
Msa0046130 AT3G63340.11 31.224 237 101 8 191 365 207 443 1.21e-19 91.3
Msa0046130 AT3G63340.6 31.224 237 101 8 191 365 207 443 1.26e-19 91.3
Msa0046130 AT3G63340.3 31.224 237 101 8 191 365 207 443 1.26e-19 91.3
Msa0046130 AT3G63340.10 31.224 237 101 8 191 365 207 443 1.26e-19 91.3
Msa0046130 AT3G63340.4 31.224 237 101 8 191 365 207 443 1.26e-19 91.3
Msa0046130 AT3G63340.8 31.224 237 101 8 191 365 207 443 1.40e-19 91.3
Msa0046130 AT1G79630.2 33.645 214 105 9 184 365 119 327 1.41e-19 90.1
Msa0046130 AT1G79630.7 33.645 214 105 9 184 365 119 327 1.41e-19 90.1
Msa0046130 AT3G63340.7 31.224 237 101 8 191 365 207 443 1.53e-19 91.3
Msa0046130 AT3G63340.5 31.224 237 101 8 191 365 207 443 1.59e-19 91.3
Msa0046130 AT3G63340.1 31.224 237 101 8 191 365 207 443 1.59e-19 91.3
Msa0046130 AT1G47380.1 32.895 228 131 10 162 369 70 295 1.84e-19 89.7
Msa0046130 AT1G79630.6 33.645 214 105 9 184 365 79 287 2.05e-19 89.4
Msa0046130 AT1G79630.3 33.645 214 105 9 184 365 79 287 2.05e-19 89.4
Msa0046130 AT1G79630.4 33.645 214 105 9 184 365 79 287 2.05e-19 89.4
Msa0046130 AT1G79630.5 33.645 214 105 9 184 365 79 287 2.05e-19 89.4
Msa0046130 AT2G40860.3 30.000 240 116 6 94 316 391 595 2.61e-19 90.1
Msa0046130 AT1G79630.1 33.645 214 105 9 184 365 189 397 3.42e-19 89.4
Msa0046130 AT1G79630.8 33.645 214 105 9 184 365 185 393 3.61e-19 89.4
Msa0046130 AT4G38520.2 28.102 274 126 9 162 368 87 356 8.99e-19 87.4
Msa0046130 AT4G38520.1 28.102 274 126 9 162 368 87 356 8.99e-19 87.4
Msa0046130 AT3G17090.1 31.760 233 115 8 162 351 90 321 1.83e-18 86.7
Msa0046130 AT5G01700.1 29.965 287 149 13 126 377 29 298 2.52e-18 85.5
Msa0046130 AT1G16220.1 28.986 345 177 17 77 365 40 372 3.24e-18 86.3
Msa0046130 AT3G12620.2 27.899 276 128 9 162 370 89 360 4.27e-18 85.5
Msa0046130 AT3G12620.1 27.899 276 128 9 162 370 89 360 4.27e-18 85.5
Msa0046130 AT5G01700.2 29.965 287 149 13 126 377 78 347 7.14e-18 84.7
Msa0046130 AT3G51370.2 30.244 205 100 6 194 356 33 236 8.95e-18 83.2
Msa0046130 AT5G06750.3 28.512 242 118 8 162 353 88 324 1.65e-17 83.6
Msa0046130 AT5G06750.1 28.512 242 118 8 162 353 88 324 1.65e-17 83.6
Msa0046130 AT1G72770.2 28.622 283 116 9 57 289 155 401 1.68e-17 84.0
Msa0046130 AT1G72770.5 28.622 283 116 9 57 289 155 401 1.68e-17 84.0
Msa0046130 AT3G17090.2 30.631 222 111 7 162 340 90 311 1.95e-17 82.8
Msa0046130 AT5G66080.1 29.461 241 120 8 162 356 88 324 2.27e-17 83.2
Msa0046130 AT3G02750.2 30.493 223 118 8 178 368 177 394 5.60e-17 82.8
Msa0046130 AT3G02750.1 30.493 223 118 8 178 368 177 394 5.60e-17 82.8
Msa0046130 AT3G63340.2 39.130 138 68 5 244 365 339 476 9.67e-17 82.8
Msa0046130 AT4G33920.1 25.614 285 140 9 162 377 67 348 9.80e-17 81.3
Msa0046130 AT5G26010.1 37.143 140 69 5 213 334 145 283 1.35e-16 80.5
Msa0046130 AT1G03590.1 34.783 184 77 8 171 334 162 322 2.24e-16 80.9
Msa0046130 AT3G55050.1 28.571 238 126 7 162 356 90 326 4.76e-16 79.3
Msa0046130 AT3G55050.2 28.571 238 126 7 162 356 90 326 4.76e-16 79.3
Msa0046130 AT4G03415.1 30.000 250 118 9 141 334 84 332 2.48e-15 77.8
Msa0046130 AT4G03415.3 30.000 250 118 9 141 334 84 332 2.48e-15 77.8
Msa0046130 AT4G03415.2 30.000 250 118 9 141 334 84 332 2.48e-15 77.8
Msa0046130 AT5G36250.1 28.704 216 115 9 193 375 183 392 4.71e-15 76.6
Msa0046130 AT3G27140.1 29.302 215 96 5 162 369 25 190 2.58e-14 72.4
Msa0046130 AT5G66080.2 31.522 184 92 5 206 356 38 220 5.24e-14 72.0
Msa0046130 AT4G32950.2 33.505 194 102 9 153 321 72 263 3.85e-13 69.7
Msa0046130 AT5G36250.2 26.957 230 115 10 193 375 183 406 5.53e-12 67.4
Msa0046130 AT5G19280.2 28.629 248 130 11 162 368 347 588 6.60e-12 67.4

Find 108 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGAAGGCATCACAATAAT+TGG 0.203859 1_1:-78163308 None:intergenic
TCTTCTTGATTACTCCTATC+TGG 0.247650 1_1:+78167486 Msa0046130:three_prime_UTR
GATTACTCCTATCTGGAAAA+AGG 0.269762 1_1:+78167493 Msa0046130:three_prime_UTR
TAATTGCTAGTGATGGTCTT+TGG 0.271545 1_1:+78166773 Msa0046130:CDS
TGACGCTCATCAGACCTATT+AGG 0.289937 1_1:-78166391 None:intergenic
GCAAAAGAATTCTGTGTAAT+GGG 0.310779 1_1:+78165415 Msa0046130:CDS
CGGTGAGGGTTGATCTTTAT+CGG 0.325268 1_1:-78163276 None:intergenic
TTCAGTATGAACTCTTGATT+TGG 0.325450 1_1:-78163132 None:intergenic
AAGTAATTCATATGAAAATA+AGG 0.326323 1_1:-78167414 None:intergenic
CTTGCTGTTTCCCGTGCATT+TGG 0.327515 1_1:+78166564 Msa0046130:CDS
TACGAGTTGTAGGATGGTTT+TGG 0.337660 1_1:+78165377 Msa0046130:CDS
TGTTGCTGACCCAGAAATTC+AGG 0.355237 1_1:+78166611 Msa0046130:CDS
GGTTTGTGATCAACAGATAA+AGG 0.365657 1_1:-78166370 None:intergenic
TCTTCAGTGGCGGTGGCATC+AGG 0.372651 1_1:+78163345 Msa0046130:CDS
TGATTACCTCAAAGAGGAAA+TGG 0.378429 1_1:+78165997 Msa0046130:CDS
CAGTTGCCAGAAGTCGCATT+AGG 0.378672 1_1:-78167359 None:intergenic
CCTCTGAACAGATAAATTAC+AGG 0.379462 1_1:+78167593 Msa0046130:three_prime_UTR
CTGTTGATCACAAACCTAAT+AGG 0.382265 1_1:+78166377 Msa0046130:CDS
ACCATCAACCTCTGATACTT+TGG 0.384660 1_1:-78164920 None:intergenic
CCACATCCTAATGCGACTTC+TGG 0.385086 1_1:+78167353 Msa0046130:CDS
CGTGTCCCATTTCCTCTTTG+AGG 0.386355 1_1:-78166003 None:intergenic
CAACATTTGCAACAAGAATT+CGG 0.403403 1_1:-78166063 None:intergenic
TAAGGGTAAAAGATCTTCAA+TGG 0.412178 1_1:+78164882 Msa0046130:CDS
AATTGCTAGTGATGGTCTTT+GGG 0.419224 1_1:+78166774 Msa0046130:CDS
CTTAGTATCTGTGATAAAGT+TGG 0.420001 1_1:-78165804 None:intergenic
GGCATCAACAGCCGTGTTGT+TGG 0.422306 1_1:+78166036 Msa0046130:CDS
GTTGCATCGAGAGCTGGTTT+AGG 0.423804 1_1:+78166100 Msa0046130:CDS
TTGTAGATATCATCTGCATT+TGG 0.425120 1_1:+78167522 Msa0046130:three_prime_UTR
GCATCAACAGCCGTGTTGTT+GGG 0.428778 1_1:+78166037 Msa0046130:CDS
AAATAGCTGGATCCGAGATA+TGG 0.431381 1_1:-78167562 None:intergenic
TTAGTATCTGTGATAAAGTT+GGG 0.434168 1_1:-78165803 None:intergenic
CTTGCGAGATGAGATACAAT+TGG 0.438168 1_1:+78163108 None:intergenic
AGCAAAAGAATTCTGTGTAA+TGG 0.440851 1_1:+78165414 Msa0046130:CDS
TCTGGGTCAGCAACAACATA+TGG 0.444817 1_1:-78166603 None:intergenic
TTTAGCCAACCTGAATTTCT+GGG 0.448034 1_1:-78166620 None:intergenic
TGGAATTATTAGGCAGCAGC+AGG 0.456587 1_1:+78165352 Msa0046130:intron
AGAGAATCGTGATCTTTAGA+AGG 0.458310 1_1:-78163323 None:intergenic
GGCCGTGGTGGCATGTTTGA+CGG 0.459320 1_1:-78163225 None:intergenic
CGAGTAGTTGCATCGAGAGC+TGG 0.468100 1_1:+78166094 Msa0046130:CDS
TGAGCGTCAAAGGATTGAAC+AGG 0.479549 1_1:+78166405 Msa0046130:CDS
CGAATTCTTGTTGCAAATGT+TGG 0.482689 1_1:+78166064 Msa0046130:CDS
TGATGTTGTCTGAGCTTCCT+CGG 0.485200 1_1:-78167307 None:intergenic
GCAGCAGGCTTACGAGTTGT+AGG 0.486609 1_1:+78165367 Msa0046130:CDS
GTCAAAGGATTGAACAGGCT+GGG 0.498918 1_1:+78166410 Msa0046130:CDS
CGTCAAAGGATTGAACAGGC+TGG 0.505334 1_1:+78166409 Msa0046130:CDS
TTTATAATAATTGCTAGTGA+TGG 0.513673 1_1:+78166766 Msa0046130:CDS
CACATGAAGGCTCCATATCT+CGG 0.516872 1_1:+78167550 Msa0046130:three_prime_UTR
GCTTAGGAGGAAGAAGTTGA+AGG 0.518042 1_1:+78166736 Msa0046130:intron
CCAGAAGTCGCATTAGGATG+TGG 0.520632 1_1:-78167353 None:intergenic
GATGTTGTCTGAGCTTCCTC+GGG 0.522318 1_1:-78167306 None:intergenic
CTGCAGTTCGCGAACCTCCA+TGG 0.527402 1_1:-78165739 None:intergenic
AGAGGATCACAATAAATAGC+TGG 0.529113 1_1:-78167575 None:intergenic
GAGGTTGATGGTCAGATGGT+TGG 0.531607 1_1:+78164931 Msa0046130:CDS
TTTATCGGAATATGCGGAGG+AGG 0.532838 1_1:-78163261 None:intergenic
TTCTTTAATAAGTTCTCTAG+AGG 0.533836 1_1:-78167276 None:intergenic
TATACAGGAACATGGAGGGT+TGG 0.534500 1_1:+78166534 Msa0046130:intron
GATTCTCTCTTCAGTGGCGG+TGG 0.537572 1_1:+78163338 Msa0046130:CDS
AAATTTCTCTGATGCAGAAG+TGG 0.538449 1_1:+78167253 Msa0046130:CDS
GATTACCTCAAAGAGGAAAT+GGG 0.540033 1_1:+78165998 Msa0046130:CDS
ATCACAATAATTGGAGCTGA+TGG 0.540170 1_1:-78163299 None:intergenic
ACAGGAACATGGAGGGTTGG+CGG 0.545577 1_1:+78166537 Msa0046130:intron
AATGGGACACGCTGGGTCCA+CGG 0.547623 1_1:+78166015 Msa0046130:CDS
TTAGCTTACTATCTGGAAGT+CGG 0.551096 1_1:+78164827 Msa0046130:intron
CTTTGAGACCAAAGTATCAG+AGG 0.553206 1_1:+78164912 Msa0046130:CDS
CGGAATGGAAGGATCAGCTA+TGG 0.556545 1_1:+78164847 Msa0046130:CDS
CAGGCTTACGAGTTGTAGGA+TGG 0.557498 1_1:+78165371 Msa0046130:CDS
TATCTGGAAGTCGGAATGGA+AGG 0.559940 1_1:+78164836 Msa0046130:CDS
TCAAAGGATTGAACAGGCTG+GGG 0.561209 1_1:+78166411 Msa0046130:CDS
ATAGGTCTGATGAGCGTCAA+AGG 0.565284 1_1:+78166395 Msa0046130:CDS
AAGAGGAAATGGGACACGCT+GGG 0.567223 1_1:+78166008 Msa0046130:CDS
GGTGGCATGTTTGACGGAGT+CGG 0.571313 1_1:-78163219 None:intergenic
ATCAGAGGTTGATGGTCAGA+TGG 0.573226 1_1:+78164927 Msa0046130:CDS
CCTGTAATTTATCTGTTCAG+AGG 0.574233 1_1:-78167593 None:intergenic
ACAGATACTAAGACAGCCAT+TGG 0.574333 1_1:+78165815 Msa0046130:CDS
CAACACGGCTGTTGATGCCG+TGG 0.574866 1_1:-78166032 None:intergenic
AAAGAGGAAATGGGACACGC+TGG 0.577155 1_1:+78166007 Msa0046130:CDS
AAGCTTGTCTCCAAATGCAC+GGG 0.577852 1_1:-78166574 None:intergenic
TTACTATCTGGAAGTCGGAA+TGG 0.578506 1_1:+78164832 Msa0046130:CDS
CACGATTCTCTCTTCAGTGG+CGG 0.582668 1_1:+78163335 Msa0046130:CDS
GAAGCTTGTCTCCAAATGCA+CGG 0.588102 1_1:-78166575 None:intergenic
CAAAGGATTGAACAGGCTGG+GGG 0.588768 1_1:+78166412 Msa0046130:CDS
TGCTGGTTTATACAGGAACA+TGG 0.590214 1_1:+78166526 Msa0046130:intron
ACCAAAGTATCAGAGGTTGA+TGG 0.597378 1_1:+78164919 Msa0046130:CDS
GGAGGAAGAAGTTGAAGGCG+TGG 0.598676 1_1:+78166741 Msa0046130:intron
AAACATGCCACCACGGCCGT+CGG 0.599926 1_1:+78163230 Msa0046130:CDS
ATCTTTATCGGAATATGCGG+AGG 0.604581 1_1:-78163264 None:intergenic
GGTTTATACAGGAACATGGA+GGG 0.611021 1_1:+78166530 Msa0046130:intron
AGACGTTGATTACCTCAAAG+AGG 0.613566 1_1:+78165991 Msa0046130:CDS
ATTGGAGCTGATGGCGGTGA+GGG 0.618148 1_1:-78163290 None:intergenic
TAGTATCTGTGATAAAGTTG+GGG 0.629686 1_1:-78165802 None:intergenic
AAATAGAAATGACAAATGTG+TGG 0.630304 1_1:+78167382 Msa0046130:exon
AATTGGAGCTGATGGCGGTG+AGG 0.633682 1_1:-78163291 None:intergenic
ATTAAAGAAGCTTATACCCG+AGG 0.634248 1_1:+78167290 Msa0046130:CDS
AATGGGGAAGACAAGGCTCA+TGG 0.634343 1_1:+78165432 Msa0046130:CDS
TTGATCTTTATCGGAATATG+CGG 0.635588 1_1:-78163267 None:intergenic
TCTGTGTAATGGGGAAGACA+AGG 0.636823 1_1:+78165425 Msa0046130:CDS
CTCCGTCAAACATGCCACCA+CGG 0.637279 1_1:+78163223 Msa0046130:CDS
TATCTGTGATAAAGTTGGGG+TGG 0.641380 1_1:-78165799 None:intergenic
GGGTAAAAGATCTTCAATGG+AGG 0.642494 1_1:+78164885 Msa0046130:CDS
ACAATAATTGGAGCTGATGG+CGG 0.645803 1_1:-78163296 None:intergenic
GATCACGATTCTCTCTTCAG+TGG 0.646111 1_1:+78163332 Msa0046130:CDS
CAAAAGAATTCTGTGTAATG+GGG 0.649574 1_1:+78165416 Msa0046130:CDS
AATAGAAATGACAAATGTGT+GGG 0.660964 1_1:+78167383 Msa0046130:three_prime_UTR
TGGTTTATACAGGAACATGG+AGG 0.666436 1_1:+78166529 Msa0046130:intron
AATTCGGTCGCCCAACAACA+CGG 0.676568 1_1:-78166047 None:intergenic
AAAGGATTGAACAGGCTGGG+GGG 0.681345 1_1:+78166413 Msa0046130:CDS
TTATAACATCATATCCACGA+TGG 0.688589 1_1:-78163184 None:intergenic
TTGGGATGTTATATCAAACG+AGG 0.704343 1_1:+78166792 Msa0046130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAAACATAAAATGATT+GGG - chr1_1:78164733-78164752 None:intergenic 10.0%
!!! ATGTTTAATTATTTGTTTTA+TGG + chr1_1:78165946-78165965 Msa0046130:intron 10.0%
!! ATTCCATTAAAAGAAAAATT+TGG + chr1_1:78164493-78164512 Msa0046130:intron 15.0%
!! TTCCATTAAAAGAAAAATTT+GGG + chr1_1:78164494-78164513 Msa0046130:intron 15.0%
!! GTATAAAAACATAAAATGAT+TGG - chr1_1:78164734-78164753 None:intergenic 15.0%
!!! ATCATTTTATGTTTTTATAC+CGG + chr1_1:78164734-78164753 Msa0046130:intron 15.0%
!! AGAATAAACCATAAAAAATT+GGG - chr1_1:78165046-78165065 None:intergenic 15.0%
!! TAGAATAAACCATAAAAAAT+TGG - chr1_1:78165047-78165066 None:intergenic 15.0%
!! AAGTAATTCATATGAAAATA+AGG - chr1_1:78167417-78167436 None:intergenic 15.0%
!! AAATTTACACAAGTGATTTA+AGG + chr1_1:78163419-78163438 Msa0046130:intron 20.0%
!! ATATGTAGCATATAAATTCA+TGG - chr1_1:78163480-78163499 None:intergenic 20.0%
!!! ATTTATTATCCTTTACCTTT+TGG - chr1_1:78163785-78163804 None:intergenic 20.0%
!! AAGAAAGTAAAAATTCACTT+TGG - chr1_1:78163814-78163833 None:intergenic 20.0%
!! GATGATAGCAAAATTATTTA+TGG + chr1_1:78164118-78164137 Msa0046130:intron 20.0%
!!! GTTAAAGCATTAATATTAAG+AGG - chr1_1:78165003-78165022 None:intergenic 20.0%
!! GAATAAACCATAAAAAATTG+GGG - chr1_1:78165045-78165064 None:intergenic 20.0%
!! TTCATCTATTAAGTTATCAA+GGG - chr1_1:78165220-78165239 None:intergenic 20.0%
!! GATCTAATCAAATCTTAAAA+GGG - chr1_1:78165615-78165634 None:intergenic 20.0%
!! TGATCTAATCAAATCTTAAA+AGG - chr1_1:78165616-78165635 None:intergenic 20.0%
!!! TTTAAGATTTGATTAGATCA+TGG + chr1_1:78165616-78165635 Msa0046130:intron 20.0%
!!! CATTCTTTTCAATTTTAGAA+TGG - chr1_1:78165651-78165670 None:intergenic 20.0%
!! CAAAACTGAATTAAACTAAA+GGG - chr1_1:78166221-78166240 None:intergenic 20.0%
!! TTAAGAACCATAAAAACAAA+TGG - chr1_1:78166480-78166499 None:intergenic 20.0%
!!! TATAACAATGAATAATTTGC+TGG + chr1_1:78166509-78166528 Msa0046130:intron 20.0%
!! TAAAAACATATACACAAAGT+GGG - chr1_1:78166670-78166689 None:intergenic 20.0%
!! ATAAAAACATATACACAAAG+TGG - chr1_1:78166671-78166690 None:intergenic 20.0%
!! TTTATAATAATTGCTAGTGA+TGG + chr1_1:78166766-78166785 Msa0046130:CDS 20.0%
!!! GCTTTAAACATATCATTATT+GGG - chr1_1:78166874-78166893 None:intergenic 20.0%
!!! TGCTTTAAACATATCATTAT+TGG - chr1_1:78166875-78166894 None:intergenic 20.0%
!! ATGGCAATATTAATATGTAA+TGG - chr1_1:78166941-78166960 None:intergenic 20.0%
!! ACATATTAATATTGCCATAT+CGG + chr1_1:78166943-78166962 Msa0046130:intron 20.0%
!! ATACATATATTTCTTGTACT+TGG + chr1_1:78167006-78167025 Msa0046130:intron 20.0%
!!! GAATTCTAAATTTTATACTC+CGG + chr1_1:78167125-78167144 Msa0046130:intron 20.0%
! TATCATTGAATATTCGATCA+AGG - chr1_1:78163543-78163562 None:intergenic 25.0%
! CTTTGTAACTATTAATTCAC+AGG + chr1_1:78163643-78163662 Msa0046130:intron 25.0%
! ACATATAGTTTCACAGATAT+TGG - chr1_1:78163696-78163715 None:intergenic 25.0%
! AATCACAATAGTAGTGTATT+AGG + chr1_1:78163729-78163748 Msa0046130:intron 25.0%
! AGATCAAATAGCATTTAACA+GGG - chr1_1:78163970-78163989 None:intergenic 25.0%
! TCGAAATAACCTAATTAAGT+AGG - chr1_1:78164369-78164388 None:intergenic 25.0%
!! GTCCCAAATTTTTCTTTTAA+TGG - chr1_1:78164499-78164518 None:intergenic 25.0%
!!! TTTACTTTTAGCTTACTATC+TGG + chr1_1:78164820-78164839 Msa0046130:intron 25.0%
!!! TATGGATATTCCAGTTTTAA+GGG + chr1_1:78164865-78164884 Msa0046130:CDS 25.0%
!! CTTTAACTATATTTTCCTCT+TGG + chr1_1:78165016-78165035 Msa0046130:intron 25.0%
! GTTCATCTATTAAGTTATCA+AGG - chr1_1:78165221-78165240 None:intergenic 25.0%
! AACAAGGATTCCTATAAAAT+TGG + chr1_1:78165465-78165484 Msa0046130:intron 25.0%
! ACAAGGATTCCTATAAAATT+GGG + chr1_1:78165466-78165485 Msa0046130:intron 25.0%
!! AGTATATGCAAATCTTTTGA+CGG + chr1_1:78165513-78165532 Msa0046130:intron 25.0%
! AATCAAATCTTAAAAGGGTT+TGG - chr1_1:78165610-78165629 None:intergenic 25.0%
! ATTCAAAAAGATGCATGAAA+AGG - chr1_1:78165697-78165716 None:intergenic 25.0%
!!! TTTTTAATCTTTTTAGGCCA+TGG + chr1_1:78165722-78165741 Msa0046130:intron 25.0%
! TTAGTATCTGTGATAAAGTT+GGG - chr1_1:78165806-78165825 None:intergenic 25.0%
! CTTCATTTGCGTTAAATTAT+AGG + chr1_1:78165844-78165863 Msa0046130:intron 25.0%
!!! TGTGGATTTTTTTAATACAG+CGG + chr1_1:78166169-78166188 Msa0046130:intron 25.0%
! GCAAAACTGAATTAAACTAA+AGG - chr1_1:78166222-78166241 None:intergenic 25.0%
! AAAAACACAAGGATGAAAAT+AGG - chr1_1:78166309-78166328 None:intergenic 25.0%
! TTGAAAAGAAGAAAAACACA+AGG - chr1_1:78166320-78166339 None:intergenic 25.0%
! GCAGGTAAATTTCATTTATA+TGG + chr1_1:78166448-78166467 Msa0046130:intron 25.0%
!!! AATAATTTGCTGGTTTATAC+AGG + chr1_1:78166519-78166538 Msa0046130:intron 25.0%
! AGGTGAGACTATTTATATTA+TGG + chr1_1:78166812-78166831 Msa0046130:intron 25.0%
! GGTGAGACTATTTATATTAT+GGG + chr1_1:78166813-78166832 Msa0046130:intron 25.0%
! AAAATAAAACAATGCCGATA+TGG - chr1_1:78166960-78166979 None:intergenic 25.0%
! TCATTCGCATAAACAAATAT+TGG + chr1_1:78167071-78167090 Msa0046130:intron 25.0%
!! TATGCACTATATATCTTTTC+AGG + chr1_1:78167211-78167230 Msa0046130:intron 25.0%
! TTCTTTAATAAGTTCTCTAG+AGG - chr1_1:78167279-78167298 None:intergenic 25.0%
! AAATAGAAATGACAAATGTG+TGG + chr1_1:78167382-78167401 Msa0046130:exon 25.0%
! AATAGAAATGACAAATGTGT+GGG + chr1_1:78167383-78167402 Msa0046130:three_prime_UTR 25.0%
TTCAGTATGAACTCTTGATT+TGG - chr1_1:78163135-78163154 None:intergenic 30.0%
TTATAACATCATATCCACGA+TGG - chr1_1:78163187-78163206 None:intergenic 30.0%
TTGATCTTTATCGGAATATG+CGG - chr1_1:78163270-78163289 None:intergenic 30.0%
!! TTAGAAGGCATCACAATAAT+TGG - chr1_1:78163311-78163330 None:intergenic 30.0%
! GGAAGTGTGATGTAAAAATT+AGG + chr1_1:78163874-78163893 Msa0046130:intron 30.0%
GACAGAGCATATAGTAATTT+GGG + chr1_1:78163935-78163954 Msa0046130:intron 30.0%
CAGATCAAATAGCATTTAAC+AGG - chr1_1:78163971-78163990 None:intergenic 30.0%
!! TGTGCAATGTTATTTCCTTA+AGG + chr1_1:78164591-78164610 Msa0046130:intron 30.0%
TTCAAAGATTTGAGAGTTGA+AGG - chr1_1:78164760-78164779 None:intergenic 30.0%
! CTATGGATATTCCAGTTTTA+AGG + chr1_1:78164864-78164883 Msa0046130:CDS 30.0%
! AGATCTTTTACCCTTAAAAC+TGG - chr1_1:78164878-78164897 None:intergenic 30.0%
TAAGGGTAAAAGATCTTCAA+TGG + chr1_1:78164882-78164901 Msa0046130:CDS 30.0%
!!! TTGGTTTCCCCAATTTTTTA+TGG + chr1_1:78165035-78165054 Msa0046130:intron 30.0%
TGGTTTATTCTATTCGTCAT+AGG + chr1_1:78165055-78165074 Msa0046130:intron 30.0%
AAGAGACAATCTTACTCTAT+AGG - chr1_1:78165102-78165121 None:intergenic 30.0%
TGAATACACCTTTACTTGTT+CGG - chr1_1:78165127-78165146 None:intergenic 30.0%
! ATTCACCGTTTGGAATTATT+AGG + chr1_1:78165342-78165361 Msa0046130:intron 30.0%
!!! TGGTTTTGGTTAAGGTTTTA+TGG + chr1_1:78165391-78165410 Msa0046130:CDS 30.0%
AGCAAAAGAATTCTGTGTAA+TGG + chr1_1:78165414-78165433 Msa0046130:CDS 30.0%
GCAAAAGAATTCTGTGTAAT+GGG + chr1_1:78165415-78165434 Msa0046130:CDS 30.0%
CAAAAGAATTCTGTGTAATG+GGG + chr1_1:78165416-78165435 Msa0046130:CDS 30.0%
TAGTATCTGTGATAAAGTTG+GGG - chr1_1:78165805-78165824 None:intergenic 30.0%
CTTAGTATCTGTGATAAAGT+TGG - chr1_1:78165807-78165826 None:intergenic 30.0%
TTGCGTTAAATTATAGGACA+TGG + chr1_1:78165850-78165869 Msa0046130:intron 30.0%
CTTATCACATTATAGTTGTG+TGG + chr1_1:78165882-78165901 Msa0046130:intron 30.0%
! AGTTCATATTTAGAACATCC+AGG - chr1_1:78165920-78165939 None:intergenic 30.0%
CAACATTTGCAACAAGAATT+CGG - chr1_1:78166066-78166085 None:intergenic 30.0%
TTTAATACAGCGGTCAATAA+AGG + chr1_1:78166179-78166198 Msa0046130:intron 30.0%
TTAATACAGCGGTCAATAAA+GGG + chr1_1:78166180-78166199 Msa0046130:intron 30.0%
!!! GATGTTGCCATTTGTTTTTA+TGG + chr1_1:78166470-78166489 Msa0046130:intron 30.0%
TATATTATGGGCCAACAAAT+AGG + chr1_1:78166825-78166844 Msa0046130:intron 30.0%
ATATTATGGGCCAACAAATA+GGG + chr1_1:78166826-78166845 Msa0046130:intron 30.0%
TTATTGGGTGAAATTCATGT+GGG - chr1_1:78166859-78166878 None:intergenic 30.0%
ATTATTGGGTGAAATTCATG+TGG - chr1_1:78166860-78166879 None:intergenic 30.0%
CATATATTTCTTGTACTTGG+CGG + chr1_1:78167009-78167028 Msa0046130:intron 30.0%
AGTGCATATTATTAGATGCT+CGG - chr1_1:78167199-78167218 None:intergenic 30.0%
! AGTATTTCCTTTTTCCAGAT+AGG - chr1_1:78167503-78167522 None:intergenic 30.0%
TTGTAGATATCATCTGCATT+TGG + chr1_1:78167522-78167541 Msa0046130:three_prime_UTR 30.0%
ATCACAATAATTGGAGCTGA+TGG - chr1_1:78163302-78163321 None:intergenic 35.0%
AGAGAATCGTGATCTTTAGA+AGG - chr1_1:78163326-78163345 None:intergenic 35.0%
! CAGTGTTACTCTTACTCATA+AGG - chr1_1:78163579-78163598 None:intergenic 35.0%
CTTATGAGTAAGAGTAACAC+TGG + chr1_1:78163577-78163596 Msa0046130:intron 35.0%
! AAGTGGCTAAAAAAGTTGGT+GGG - chr1_1:78163613-78163632 None:intergenic 35.0%
CATCAAGTGGCTAAAAAAGT+TGG - chr1_1:78163617-78163636 None:intergenic 35.0%
!!! TTTTTTAGCCACTTGATGCT+TGG + chr1_1:78163619-78163638 Msa0046130:intron 35.0%
ACGTTCAAACCAAAAGGTAA+AGG + chr1_1:78163773-78163792 Msa0046130:intron 35.0%
CGACAGAGCATATAGTAATT+TGG + chr1_1:78163934-78163953 Msa0046130:intron 35.0%
ACCTTGAATTGTCATTGTCA+GGG - chr1_1:78164008-78164027 None:intergenic 35.0%
AACCTTGAATTGTCATTGTC+AGG - chr1_1:78164009-78164028 None:intergenic 35.0%
CTAATTAAGTAGGATCGAGA+AGG - chr1_1:78164359-78164378 None:intergenic 35.0%
CTTCTCGATCCTACTTAATT+AGG + chr1_1:78164357-78164376 Msa0046130:intron 35.0%
CAACACACAAAATCACAACT+AGG - chr1_1:78164393-78164412 None:intergenic 35.0%
! TTGCCATCAGCTATAGATTT+TGG - chr1_1:78164562-78164581 None:intergenic 35.0%
CCATTGCATATAATGCCAAT+GGG - chr1_1:78164659-78164678 None:intergenic 35.0%
ACCATTGCATATAATGCCAA+TGG - chr1_1:78164660-78164679 None:intergenic 35.0%
TTAGCTTACTATCTGGAAGT+CGG + chr1_1:78164827-78164846 Msa0046130:intron 35.0%
!!! GGCTTTTTTGGTGTTTTTGA+TGG + chr1_1:78164952-78164971 Msa0046130:CDS 35.0%
!! TGTTTTTGATGGTATGTCCT+AGG + chr1_1:78164963-78164982 Msa0046130:intron 35.0%
!! GTTTTTGATGGTATGTCCTA+GGG + chr1_1:78164964-78164983 Msa0046130:intron 35.0%
AGGTACAAAACAAAAACCCT+AGG - chr1_1:78164983-78165002 None:intergenic 35.0%
AAAAAATTGGGGAAACCAAG+AGG - chr1_1:78165034-78165053 None:intergenic 35.0%
GTGTATTCAGTATTCACTGT+TGG + chr1_1:78165138-78165157 Msa0046130:intron 35.0%
!! AGAGCTTTTTCCAATATGCT+TGG + chr1_1:78165251-78165270 Msa0046130:intron 35.0%
!! GAGCTTTTTCCAATATGCTT+GGG + chr1_1:78165252-78165271 Msa0046130:intron 35.0%
GTAATTGAACCCAAGCATAT+TGG - chr1_1:78165264-78165283 None:intergenic 35.0%
TATGCTTGGGTTCAATTACT+AGG + chr1_1:78165265-78165284 Msa0046130:intron 35.0%
TGCTGCCTAATAATTCCAAA+CGG - chr1_1:78165350-78165369 None:intergenic 35.0%
!!! TTGTAGGATGGTTTTGGTTA+AGG + chr1_1:78165383-78165402 Msa0046130:CDS 35.0%
AGGATTCCTATAAAATTGGG+AGG + chr1_1:78165469-78165488 Msa0046130:intron 35.0%
GGATTCCTATAAAATTGGGA+GGG + chr1_1:78165470-78165489 Msa0046130:intron 35.0%
AATGCTTTGTACAGCAAAGA+GGG + chr1_1:78165565-78165584 Msa0046130:intron 35.0%
!! TTAATCTTTTTAGGCCATGG+AGG + chr1_1:78165725-78165744 Msa0046130:intron 35.0%
GCAAATGAAGTACATACCAA+TGG - chr1_1:78165834-78165853 None:intergenic 35.0%
CACATTATAGTTGTGTGGTT+TGG + chr1_1:78165887-78165906 Msa0046130:intron 35.0%
TGATTACCTCAAAGAGGAAA+TGG + chr1_1:78165997-78166016 Msa0046130:CDS 35.0%
GATTACCTCAAAGAGGAAAT+GGG + chr1_1:78165998-78166017 Msa0046130:CDS 35.0%
CGAATTCTTGTTGCAAATGT+TGG + chr1_1:78166064-78166083 Msa0046130:CDS 35.0%
GAATTAGATTGGACACAATG+TGG + chr1_1:78166151-78166170 Msa0046130:intron 35.0%
GGTTTGTGATCAACAGATAA+AGG - chr1_1:78166373-78166392 None:intergenic 35.0%
CTGTTGATCACAAACCTAAT+AGG + chr1_1:78166377-78166396 Msa0046130:CDS 35.0%
TTTAGCCAACCTGAATTTCT+GGG - chr1_1:78166623-78166642 None:intergenic 35.0%
! TTTTAGCCAACCTGAATTTC+TGG - chr1_1:78166624-78166643 None:intergenic 35.0%
AACATATACACAAAGTGGGT+AGG - chr1_1:78166666-78166685 None:intergenic 35.0%
CTACTAATTTATCCCCTCTT+TGG + chr1_1:78166702-78166721 Msa0046130:intron 35.0%
!!! TTTGGATACTCTTTTGGCTT+AGG + chr1_1:78166720-78166739 Msa0046130:intron 35.0%
TAATTGCTAGTGATGGTCTT+TGG + chr1_1:78166773-78166792 Msa0046130:CDS 35.0%
AATTGCTAGTGATGGTCTTT+GGG + chr1_1:78166774-78166793 Msa0046130:CDS 35.0%
TTGGGATGTTATATCAAACG+AGG + chr1_1:78166792-78166811 Msa0046130:CDS 35.0%
! AATTTTATACTCCGGCAACT+TGG + chr1_1:78167133-78167152 Msa0046130:intron 35.0%
!!! ACTTGGTGTTGGTACATTTT+CGG + chr1_1:78167150-78167169 Msa0046130:intron 35.0%
GTGCATATTATTAGATGCTC+GGG - chr1_1:78167198-78167217 None:intergenic 35.0%
!! GCACTATATATCTTTTCAGG+AGG + chr1_1:78167214-78167233 Msa0046130:intron 35.0%
!! CTATATATCTTTTCAGGAGG+CGG + chr1_1:78167217-78167236 Msa0046130:intron 35.0%
AAATTTCTCTGATGCAGAAG+TGG + chr1_1:78167253-78167272 Msa0046130:CDS 35.0%
ATTAAAGAAGCTTATACCCG+AGG + chr1_1:78167290-78167309 Msa0046130:CDS 35.0%
TCTTCTTGATTACTCCTATC+TGG + chr1_1:78167486-78167505 Msa0046130:three_prime_UTR 35.0%
GATTACTCCTATCTGGAAAA+AGG + chr1_1:78167493-78167512 Msa0046130:three_prime_UTR 35.0%
!!! GCATTTGGTTTTACACATGA+AGG + chr1_1:78167537-78167556 Msa0046130:three_prime_UTR 35.0%
AGAGGATCACAATAAATAGC+TGG - chr1_1:78167578-78167597 None:intergenic 35.0%
CCTGTAATTTATCTGTTCAG+AGG - chr1_1:78167596-78167615 None:intergenic 35.0%
CCTCTGAACAGATAAATTAC+AGG + chr1_1:78167593-78167612 Msa0046130:three_prime_UTR 35.0%
ATCTTTATCGGAATATGCGG+AGG - chr1_1:78163267-78163286 None:intergenic 40.0%
ACAATAATTGGAGCTGATGG+CGG - chr1_1:78163299-78163318 None:intergenic 40.0%
CAAGTGGCTAAAAAAGTTGG+TGG - chr1_1:78163614-78163633 None:intergenic 40.0%
TACAAAGTCCAAGCATCAAG+TGG - chr1_1:78163630-78163649 None:intergenic 40.0%
TGTAGCTTGAAACCCAGAAT+AGG + chr1_1:78163852-78163871 Msa0046130:intron 40.0%
GTAGCTTGAAACCCAGAATA+GGG + chr1_1:78163853-78163872 Msa0046130:intron 40.0%
ACATCACACTTCCCTATTCT+GGG - chr1_1:78163867-78163886 None:intergenic 40.0%
TACATCACACTTCCCTATTC+TGG - chr1_1:78163868-78163887 None:intergenic 40.0%
TCCCTGACAATGACAATTCA+AGG + chr1_1:78164004-78164023 Msa0046130:intron 40.0%
TGTGCTATCCTGAGTGTTTA+TGG + chr1_1:78164161-78164180 Msa0046130:intron 40.0%
ATTCGAGTCCATAAACACTC+AGG - chr1_1:78164172-78164191 None:intergenic 40.0%
GAATTTACTCGAGTCATGTG+CGG + chr1_1:78164188-78164207 Msa0046130:intron 40.0%
!! ATCAGCTATAGATTTTGGCC+TGG - chr1_1:78164557-78164576 None:intergenic 40.0%
AGGCCAAAATCTATAGCTGA+TGG + chr1_1:78164556-78164575 Msa0046130:intron 40.0%
CCCATTGGCATTATATGCAA+TGG + chr1_1:78164656-78164675 Msa0046130:intron 40.0%
AATGATTGGGTGACATTCGA+GGG - chr1_1:78164720-78164739 None:intergenic 40.0%
AAATGATTGGGTGACATTCG+AGG - chr1_1:78164721-78164740 None:intergenic 40.0%
AAGATTTGAGAGTTGAAGGC+CGG - chr1_1:78164756-78164775 None:intergenic 40.0%
TTACTATCTGGAAGTCGGAA+TGG + chr1_1:78164832-78164851 Msa0046130:CDS 40.0%
GGGTAAAAGATCTTCAATGG+AGG + chr1_1:78164885-78164904 Msa0046130:CDS 40.0%
!! CTTTGAGACCAAAGTATCAG+AGG + chr1_1:78164912-78164931 Msa0046130:CDS 40.0%
! ACCAAAGTATCAGAGGTTGA+TGG + chr1_1:78164919-78164938 Msa0046130:CDS 40.0%
ACCATCAACCTCTGATACTT+TGG - chr1_1:78164923-78164942 None:intergenic 40.0%
! ACTCTATAGGAGTCTTATCC+TGG - chr1_1:78165089-78165108 None:intergenic 40.0%
TCTCTTAGCCGAACAAGTAA+AGG + chr1_1:78165116-78165135 Msa0046130:intron 40.0%
AGCAGTGCGTAATAAGATCA+TGG - chr1_1:78165180-78165199 None:intergenic 40.0%
! TAGAGCATCAGAAATGAGCT+TGG + chr1_1:78165311-78165330 Msa0046130:intron 40.0%
! TACGAGTTGTAGGATGGTTT+TGG + chr1_1:78165377-78165396 Msa0046130:CDS 40.0%
TCATGGTTCTCAACTCAACA+AGG + chr1_1:78165449-78165468 Msa0046130:intron 40.0%
CAATGCTTTGTACAGCAAAG+AGG + chr1_1:78165564-78165583 Msa0046130:intron 40.0%
TATCTGTGATAAAGTTGGGG+TGG - chr1_1:78165802-78165821 None:intergenic 40.0%
ACAGATACTAAGACAGCCAT+TGG + chr1_1:78165815-78165834 Msa0046130:CDS 40.0%
! AGACGTTGATTACCTCAAAG+AGG + chr1_1:78165991-78166010 Msa0046130:CDS 40.0%
AGTTCCATGTCAATTACGTG+TGG + chr1_1:78166125-78166144 Msa0046130:intron 40.0%
GTTCCATGTCAATTACGTGT+GGG + chr1_1:78166126-78166145 Msa0046130:intron 40.0%
ACGTGTGGGAAGAATTAGAT+TGG + chr1_1:78166140-78166159 Msa0046130:intron 40.0%
!! TGCTGGTTTATACAGGAACA+TGG + chr1_1:78166526-78166545 Msa0046130:intron 40.0%
TGGTTTATACAGGAACATGG+AGG + chr1_1:78166529-78166548 Msa0046130:intron 40.0%
GGTTTATACAGGAACATGGA+GGG + chr1_1:78166530-78166549 Msa0046130:intron 40.0%
!! CCAAAAGAGTATCCAAAGAG+GGG - chr1_1:78166717-78166736 None:intergenic 40.0%
!! GCCAAAAGAGTATCCAAAGA+GGG - chr1_1:78166718-78166737 None:intergenic 40.0%
!! AGCCAAAAGAGTATCCAAAG+AGG - chr1_1:78166719-78166738 None:intergenic 40.0%
AAATAGCTGGATCCGAGATA+TGG - chr1_1:78167565-78167584 None:intergenic 40.0%
! AGTACTTTTCTCGTCCATCG+TGG + chr1_1:78163170-78163189 Msa0046130:CDS 45.0%
TTTATCGGAATATGCGGAGG+AGG - chr1_1:78163264-78163283 None:intergenic 45.0%
! CGGTGAGGGTTGATCTTTAT+CGG - chr1_1:78163279-78163298 None:intergenic 45.0%
GATCACGATTCTCTCTTCAG+TGG + chr1_1:78163332-78163351 Msa0046130:CDS 45.0%
!! GCTAAAAAAGTTGGTGGGAG+GGG - chr1_1:78163608-78163627 None:intergenic 45.0%
!! GGCTAAAAAAGTTGGTGGGA+GGG - chr1_1:78163609-78163628 None:intergenic 45.0%
!! TGGCTAAAAAAGTTGGTGGG+AGG - chr1_1:78163610-78163629 None:intergenic 45.0%
!!! CCTTTTGGTTTGAACGTCGT+AGG - chr1_1:78163770-78163789 None:intergenic 45.0%
CCTACGACGTTCAAACCAAA+AGG + chr1_1:78163767-78163786 Msa0046130:intron 45.0%
ATCTTGCACGCGATTCAGAT+TGG - chr1_1:78164090-78164109 None:intergenic 45.0%
GTTTCTGACCAAGATCAGGA+GGG - chr1_1:78164429-78164448 None:intergenic 45.0%
AGTTTCTGACCAAGATCAGG+AGG - chr1_1:78164430-78164449 None:intergenic 45.0%
TCGAGTTTCTGACCAAGATC+AGG - chr1_1:78164433-78164452 None:intergenic 45.0%
GACATGTGAAATTGCCGTGT+TGG + chr1_1:78164516-78164535 Msa0046130:intron 45.0%
GGTAAGCACTTGATCCAACA+CGG - chr1_1:78164533-78164552 None:intergenic 45.0%
!! AGCTATAGATTTTGGCCTGG+AGG - chr1_1:78164554-78164573 None:intergenic 45.0%
!!! TTTTGCTGGCTTTCATGCGT+GGG - chr1_1:78164697-78164716 None:intergenic 45.0%
TATCTGGAAGTCGGAATGGA+AGG + chr1_1:78164836-78164855 Msa0046130:CDS 45.0%
!! ATCAGAGGTTGATGGTCAGA+TGG + chr1_1:78164927-78164946 Msa0046130:CDS 45.0%
!!! GGTCAGATGGTTGGCTTTTT+TGG + chr1_1:78164940-78164959 Msa0046130:CDS 45.0%
GGTAGACGATATTCACCGTT+TGG + chr1_1:78165332-78165351 Msa0046130:intron 45.0%
TGGAATTATTAGGCAGCAGC+AGG + chr1_1:78165352-78165371 Msa0046130:intron 45.0%
! TCTGTGTAATGGGGAAGACA+AGG + chr1_1:78165425-78165444 Msa0046130:CDS 45.0%
! GTACGCCCTCCCAATTTTAT+AGG - chr1_1:78165478-78165497 None:intergenic 45.0%
CTTCCCACACGTAATTGACA+TGG - chr1_1:78166132-78166151 None:intergenic 45.0%
TGACGCTCATCAGACCTATT+AGG - chr1_1:78166394-78166413 None:intergenic 45.0%
ATAGGTCTGATGAGCGTCAA+AGG + chr1_1:78166395-78166414 Msa0046130:CDS 45.0%
TGAGCGTCAAAGGATTGAAC+AGG + chr1_1:78166405-78166424 Msa0046130:CDS 45.0%
GTCAAAGGATTGAACAGGCT+GGG + chr1_1:78166410-78166429 Msa0046130:CDS 45.0%
TCAAAGGATTGAACAGGCTG+GGG + chr1_1:78166411-78166430 Msa0046130:CDS 45.0%
TATACAGGAACATGGAGGGT+TGG + chr1_1:78166534-78166553 Msa0046130:intron 45.0%
AAGCTTGTCTCCAAATGCAC+GGG - chr1_1:78166577-78166596 None:intergenic 45.0%
GAAGCTTGTCTCCAAATGCA+CGG - chr1_1:78166578-78166597 None:intergenic 45.0%
TCTGGGTCAGCAACAACATA+TGG - chr1_1:78166606-78166625 None:intergenic 45.0%
TGTTGCTGACCCAGAAATTC+AGG + chr1_1:78166611-78166630 Msa0046130:CDS 45.0%
! CCCCTCTTTGGATACTCTTT+TGG + chr1_1:78166714-78166733 Msa0046130:intron 45.0%
!!! GGATACTCTTTTGGCTTAGG+AGG + chr1_1:78166723-78166742 Msa0046130:intron 45.0%
GCTTAGGAGGAAGAAGTTGA+AGG + chr1_1:78166736-78166755 Msa0046130:intron 45.0%
ATGTACCAACACCAAGTTGC+CGG - chr1_1:78167147-78167166 None:intergenic 45.0%
TGATGTTGTCTGAGCTTCCT+CGG - chr1_1:78167310-78167329 None:intergenic 45.0%
CACATGAAGGCTCCATATCT+CGG + chr1_1:78167550-78167569 Msa0046130:three_prime_UTR 45.0%
!!! TTAATTTTTTTAATCTTTTT+AGG + chr1_1:78165716-78165735 Msa0046130:intron 5.0%
!!! GGAGGAGGTTTTTTCTCCGA+CGG - chr1_1:78163249-78163268 None:intergenic 50.0%
CACGATTCTCTCTTCAGTGG+CGG + chr1_1:78163335-78163354 Msa0046130:CDS 50.0%
TCAGATTGGAAGGGGTGAGT+AGG - chr1_1:78164076-78164095 None:intergenic 50.0%
CACGCGATTCAGATTGGAAG+GGG - chr1_1:78164084-78164103 None:intergenic 50.0%
GCACGCGATTCAGATTGGAA+GGG - chr1_1:78164085-78164104 None:intergenic 50.0%
TGCACGCGATTCAGATTGGA+AGG - chr1_1:78164086-78164105 None:intergenic 50.0%
TGGATCAAGTGCTTACCTCC+AGG + chr1_1:78164536-78164555 Msa0046130:intron 50.0%
GCAAACGCTAAAGCTAGACG+CGG - chr1_1:78164627-78164646 None:intergenic 50.0%
TTTCATGCGTGGGATTCAGC+AGG - chr1_1:78164687-78164706 None:intergenic 50.0%
!!! GTTTTGCTGGCTTTCATGCG+TGG - chr1_1:78164698-78164717 None:intergenic 50.0%
! GTGACATTCGAGGGTTTTGC+TGG - chr1_1:78164711-78164730 None:intergenic 50.0%
CGGAATGGAAGGATCAGCTA+TGG + chr1_1:78164847-78164866 Msa0046130:CDS 50.0%
!! GAGGTTGATGGTCAGATGGT+TGG + chr1_1:78164931-78164950 Msa0046130:CDS 50.0%
TCGTCATAGGACAATCTGCC+AGG + chr1_1:78165068-78165087 Msa0046130:intron 50.0%
CAGGCTTACGAGTTGTAGGA+TGG + chr1_1:78165371-78165390 Msa0046130:CDS 50.0%
AATGGGGAAGACAAGGCTCA+TGG + chr1_1:78165432-78165451 Msa0046130:CDS 50.0%
CGTGTCCCATTTCCTCTTTG+AGG - chr1_1:78166006-78166025 None:intergenic 50.0%
AAAGAGGAAATGGGACACGC+TGG + chr1_1:78166007-78166026 Msa0046130:CDS 50.0%
AAGAGGAAATGGGACACGCT+GGG + chr1_1:78166008-78166027 Msa0046130:CDS 50.0%
! GCATCAACAGCCGTGTTGTT+GGG + chr1_1:78166037-78166056 Msa0046130:CDS 50.0%
AATTCGGTCGCCCAACAACA+CGG - chr1_1:78166050-78166069 None:intergenic 50.0%
! GTTGCATCGAGAGCTGGTTT+AGG + chr1_1:78166100-78166119 Msa0046130:CDS 50.0%
CGTCAAAGGATTGAACAGGC+TGG + chr1_1:78166409-78166428 Msa0046130:CDS 50.0%
CAAAGGATTGAACAGGCTGG+GGG + chr1_1:78166412-78166431 Msa0046130:CDS 50.0%
AAAGGATTGAACAGGCTGGG+GGG + chr1_1:78166413-78166432 Msa0046130:CDS 50.0%
!! CTTGCTGTTTCCCGTGCATT+TGG + chr1_1:78166564-78166583 Msa0046130:CDS 50.0%
GCTGACCCAGAAATTCAGGT+TGG + chr1_1:78166615-78166634 Msa0046130:intron 50.0%
GGGTCTGACTCCCTATTTGT+TGG - chr1_1:78166839-78166858 None:intergenic 50.0%
!! ATACTCCGGCAACTTGGTGT+TGG + chr1_1:78167139-78167158 Msa0046130:intron 50.0%
!! TTTTCAGGAGGCGGTGTCTT+TGG + chr1_1:78167226-78167245 Msa0046130:intron 50.0%
GATGTTGTCTGAGCTTCCTC+GGG - chr1_1:78167309-78167328 None:intergenic 50.0%
CCAGAAGTCGCATTAGGATG+TGG - chr1_1:78167356-78167375 None:intergenic 50.0%
CCACATCCTAATGCGACTTC+TGG + chr1_1:78167353-78167372 Msa0046130:CDS 50.0%
CAGTTGCCAGAAGTCGCATT+AGG - chr1_1:78167362-78167381 None:intergenic 50.0%
GGTGGCATGTTTGACGGAGT+CGG - chr1_1:78163222-78163241 None:intergenic 55.0%
CTCCGTCAAACATGCCACCA+CGG + chr1_1:78163223-78163242 Msa0046130:CDS 55.0%
!! ATTGGAGCTGATGGCGGTGA+GGG - chr1_1:78163293-78163312 None:intergenic 55.0%
!! AATTGGAGCTGATGGCGGTG+AGG - chr1_1:78163294-78163313 None:intergenic 55.0%
GATTCTCTCTTCAGTGGCGG+TGG + chr1_1:78163338-78163357 Msa0046130:CDS 55.0%
TACTCGAGTCATGTGCGGTC+TGG + chr1_1:78164193-78164212 Msa0046130:intron 55.0%
CGTGTGTCTGTGTGTGTGTG+TGG + chr1_1:78164263-78164282 Msa0046130:intron 55.0%
TTGCTACGCCCTCCTGATCT+TGG + chr1_1:78164418-78164437 Msa0046130:intron 55.0%
!! CGCGGCTCTGAGAATCCTTA+AGG - chr1_1:78164609-78164628 None:intergenic 55.0%
GTTTGCAGTGCTGCACCCAT+TGG + chr1_1:78164641-78164660 Msa0046130:intron 55.0%
GCAGCAGGCTTACGAGTTGT+AGG + chr1_1:78165367-78165386 Msa0046130:CDS 55.0%
!! GTGTGGTTTGGTCTGCTACC+TGG + chr1_1:78165899-78165918 Msa0046130:intron 55.0%
GGCATCAACAGCCGTGTTGT+TGG + chr1_1:78166036-78166055 Msa0046130:CDS 55.0%
CGAGTAGTTGCATCGAGAGC+TGG + chr1_1:78166094-78166113 Msa0046130:CDS 55.0%
AGGCTGGGGGGTTCGTAATA+TGG + chr1_1:78166425-78166444 Msa0046130:CDS 55.0%
GGCTGGGGGGTTCGTAATAT+GGG + chr1_1:78166426-78166445 Msa0046130:CDS 55.0%
ACAGGAACATGGAGGGTTGG+CGG + chr1_1:78166537-78166556 Msa0046130:intron 55.0%
GGAGGAAGAAGTTGAAGGCG+TGG + chr1_1:78166741-78166760 Msa0046130:intron 55.0%
GGCCGTGGTGGCATGTTTGA+CGG - chr1_1:78163228-78163247 None:intergenic 60.0%
AAACATGCCACCACGGCCGT+CGG + chr1_1:78163230-78163249 Msa0046130:CDS 60.0%
! TTTTTCTCCGACGGCCGTGG+TGG - chr1_1:78163240-78163259 None:intergenic 60.0%
!!! GGTTTTTTCTCCGACGGCCG+TGG - chr1_1:78163243-78163262 None:intergenic 60.0%
TCTTCAGTGGCGGTGGCATC+AGG + chr1_1:78163345-78163364 Msa0046130:CDS 60.0%
CTGCAGTTCGCGAACCTCCA+TGG - chr1_1:78165742-78165761 None:intergenic 60.0%
AATGGGACACGCTGGGTCCA+CGG + chr1_1:78166015-78166034 Msa0046130:CDS 60.0%
CAACACGGCTGTTGATGCCG+TGG - chr1_1:78166035-78166054 None:intergenic 60.0%
GGGGGGTTCGTAATATGGGC+AGG + chr1_1:78166430-78166449 Msa0046130:CDS 60.0%
GACGCGCGTGTGTCTGTGTG+TGG + chr1_1:78164288-78164307 Msa0046130:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 78163116 78167631 78163116 ID=Msa0046130;Name=Msa0046130
chr1_1 mRNA 78163116 78167631 78163116 ID=Msa0046130-mRNA-1;Parent=Msa0046130;Name=Msa0046130-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.75|0.77|0.88|1|1|9|249|377
chr1_1 exon 78163116 78163366 78163116 ID=Msa0046130-mRNA-1:exon:26819;Parent=Msa0046130-mRNA-1
chr1_1 exon 78164831 78164973 78164831 ID=Msa0046130-mRNA-1:exon:26820;Parent=Msa0046130-mRNA-1
chr1_1 exon 78165364 78165453 78165364 ID=Msa0046130-mRNA-1:exon:26821;Parent=Msa0046130-mRNA-1
chr1_1 exon 78165738 78165836 78165738 ID=Msa0046130-mRNA-1:exon:26822;Parent=Msa0046130-mRNA-1
chr1_1 exon 78165972 78166121 78165972 ID=Msa0046130-mRNA-1:exon:26823;Parent=Msa0046130-mRNA-1
chr1_1 exon 78166365 78166451 78166365 ID=Msa0046130-mRNA-1:exon:26824;Parent=Msa0046130-mRNA-1
chr1_1 exon 78166541 78166632 78166541 ID=Msa0046130-mRNA-1:exon:26825;Parent=Msa0046130-mRNA-1
chr1_1 exon 78166742 78166813 78166742 ID=Msa0046130-mRNA-1:exon:26826;Parent=Msa0046130-mRNA-1
chr1_1 exon 78167233 78167631 78167233 ID=Msa0046130-mRNA-1:exon:26827;Parent=Msa0046130-mRNA-1
chr1_1 CDS 78163116 78163366 78163116 ID=Msa0046130-mRNA-1:cds;Parent=Msa0046130-mRNA-1
chr1_1 CDS 78164831 78164973 78164831 ID=Msa0046130-mRNA-1:cds;Parent=Msa0046130-mRNA-1
chr1_1 CDS 78165364 78165453 78165364 ID=Msa0046130-mRNA-1:cds;Parent=Msa0046130-mRNA-1
chr1_1 CDS 78165738 78165836 78165738 ID=Msa0046130-mRNA-1:cds;Parent=Msa0046130-mRNA-1
chr1_1 CDS 78165972 78166121 78165972 ID=Msa0046130-mRNA-1:cds;Parent=Msa0046130-mRNA-1
chr1_1 CDS 78166365 78166451 78166365 ID=Msa0046130-mRNA-1:cds;Parent=Msa0046130-mRNA-1
chr1_1 CDS 78166541 78166632 78166541 ID=Msa0046130-mRNA-1:cds;Parent=Msa0046130-mRNA-1
chr1_1 CDS 78166742 78166813 78166742 ID=Msa0046130-mRNA-1:cds;Parent=Msa0046130-mRNA-1
chr1_1 CDS 78167233 78167382 78167233 ID=Msa0046130-mRNA-1:cds;Parent=Msa0046130-mRNA-1
chr1_1 three_prime_UTR 78167383 78167631 78167383 ID=Msa0046130-mRNA-1:three_prime_utr;Parent=Msa0046130-mRNA-1
Gene Sequence

>Msa0046130

ATGAGATACAATTGGACCAAATCAAGAGTTCATACTGAAGTCGTTTGTCTTTTGAGTACTTTTCTCGTCCATCGTGGATATGATGTTATAATGATCTCAGACACCGACTCCGTCAAACATGCCACCACGGCCGTCGGAGAAAAAACCTCCTCCGCATATTCCGATAAAGATCAACCCTCACCGCCATCAGCTCCAATTATTGTGATGCCTTCTAAAGATCACGATTCTCTCTTCAGTGGCGGTGGCATCAGCTTACTATCTGGAAGTCGGAATGGAAGGATCAGCTATGGATATTCCAGTTTTAAGGGTAAAAGATCTTCAATGGAGGATTTCTTTGAGACCAAAGTATCAGAGGTTGATGGTCAGATGGTTGGCTTTTTTGGTGTTTTTGATGGCAGCAGCAGGCTTACGAGTTGTAGGATGGTTTTGGTTAAGGTTTTATGGAGCAAAAGAATTCTGTGTAATGGGGAAGACAAGGCTCATGGCCATGGAGGTTCGCGAACTGCAGAATATCTGAAAAATAATTTATTCAAGAATTTGTGTAGCCACCCCAACTTTATCACAGATACTAAGACAGCCATTGTTGAAGCATTTAAACAAACAGACGTTGATTACCTCAAAGAGGAAATGGGACACGCTGGGTCCACGGCATCAACAGCCGTGTTGTTGGGCGACCGAATTCTTGTTGCAAATGTTGGTGATTCTCGAGTAGTTGCATCGAGAGCTGGTTTAGCTGTTCCTTTATCTGTTGATCACAAACCTAATAGGTCTGATGAGCGTCAAAGGATTGAACAGGCTGGGGGGTTCGTAATATGGGCAGGAACATGGAGGGTTGGCGGCATTCTTGCTGTTTCCCGTGCATTTGGAGACAAGCTTCTTAGACCATATGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAGTTGAAGGCGTGGATTTTATAATAATTGCTAGTGATGGTCTTTGGGATGTTATATCAAACGAGGAGGCGGTGTCTTTGGTACAAAATTTCTCTGATGCAGAAGTGGCCTCTAGAGAACTTATTAAAGAAGCTTATACCCGAGGAAGCTCAGACAACATCACTTGTGTTGTTGTTCGATTTGATCCACATCCTAATGCGACTTCTGGCAACTGA
Protein sequence

>Msa0046130

MRYNWTKSRVHTEVVCLLSTFLVHRGYDVIMISDTDSVKHATTAVGEKTSSAYSDKDQPSPPSAPIIVMPSKDHDSLFSGGGISLLSGSRNGRISYGYSSFKGKRSSMEDFFETKVSEVDGQMVGFFGVFDGSSRLTSCRMVLVKVLWSKRILCNGEDKAHGHGGSRTAEYLKNNLFKNLCSHPNFITDTKTAIVEAFKQTDVDYLKEEMGHAGSTASTAVLLGDRILVANVGDSRVVASRAGLAVPLSVDHKPNRSDERQRIEQAGGFVIWAGTWRVGGILAVSRAFGDKLLRPYVVADPEIQEEEVEGVDFIIIASDGLWDVISNEEAVSLVQNFSDAEVASRELIKEAYTRGSSDNITCVVVRFDPHPNATSGN*