Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046610 | XP_003600967.1 | 84.320 | 338 | 13 | 1 | 1 | 298 | 1 | 338 | 0.0 | 538 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046610 | sp|Q9SIZ2|IF2AH_ARATH | 68.529 | 340 | 64 | 3 | 2 | 298 | 5 | 344 | 1.02e-143 | 410 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046610 | G7JBX8 | 84.320 | 338 | 13 | 1 | 1 | 298 | 1 | 338 | 0.0 | 538 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0046610 | Msa1124010 | 0.820692 | 5.996999e-53 | -8.615850e-47 |
| Msa0046610 | Msa1173470 | 0.803014 | 4.267518e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046610 | MtrunA17_Chr3g0113991 | 84.320 | 338 | 13 | 1 | 1 | 298 | 1 | 338 | 0.0 | 538 |
| Msa0046610 | MtrunA17_Chr3g0114021 | 74.706 | 340 | 44 | 2 | 1 | 298 | 1 | 340 | 5.44e-161 | 451 |
| Msa0046610 | MtrunA17_Chr3g0114001 | 73.824 | 340 | 47 | 2 | 1 | 298 | 1 | 340 | 2.10e-156 | 440 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046610 | AT2G40290.1 | 68.529 | 340 | 64 | 3 | 2 | 298 | 5 | 344 | 1.04e-144 | 410 |
| Msa0046610 | AT5G05470.1 | 63.235 | 340 | 82 | 3 | 2 | 298 | 5 | 344 | 1.97e-129 | 372 |
| Msa0046610 | AT2G40290.2 | 74.661 | 221 | 16 | 1 | 2 | 182 | 5 | 225 | 2.15e-103 | 302 |
| Msa0046610 | AT2G40290.3 | 74.661 | 221 | 16 | 1 | 2 | 182 | 5 | 225 | 2.15e-103 | 302 |
Find 99 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCCTGAATTGGAGTAAT+TGG | 0.153515 | 1_1:-78879674 | None:intergenic |
| CACGACGATGACTCCGAATT+TGG | 0.179625 | 1_1:+78876692 | Msa0046610:exon |
| CTTCGTGTTGATAAGGAAAA+AGG | 0.221942 | 1_1:+78876921 | Msa0046610:CDS |
| TGATGGAATTATACACATTA+AGG | 0.268564 | 1_1:+78877990 | Msa0046610:CDS |
| TTGACAGGAGCAAGGAAAAT+TGG | 0.274809 | 1_1:+78879379 | Msa0046610:intron |
| AACCTTGGACCTTGATTTAG+AGG | 0.294178 | 1_1:+78877052 | Msa0046610:CDS |
| GGAGTCATCGTCGTGTCGTT+AGG | 0.316618 | 1_1:-78876684 | None:intergenic |
| ATTTCCAATTACTCCAATTC+AGG | 0.327577 | 1_1:+78879670 | Msa0046610:CDS |
| TATCCACAAACTCCTAAGTT+TGG | 0.330470 | 1_1:-78879934 | None:intergenic |
| TCATTATCTTCATCCTGAAT+TGG | 0.341684 | 1_1:-78879683 | None:intergenic |
| CCCCTCAGCCATTCAAAATC+AGG | 0.345298 | 1_1:+78877938 | Msa0046610:CDS |
| TGAATTGGAGTAATTGGAAA+TGG | 0.378109 | 1_1:-78879668 | None:intergenic |
| ATGCGGAAGGCTGAAGCCGC+TGG | 0.416762 | 1_1:+78878148 | Msa0046610:CDS |
| AATCCAAACTTAGGAGTTTG+TGG | 0.422761 | 1_1:+78879931 | Msa0046610:three_prime_UTR |
| TGTGTTGTTCAGGATGTTGA+TGG | 0.423150 | 1_1:+78879638 | Msa0046610:intron |
| GATGGTTCTTCGTGTTGATA+AGG | 0.427509 | 1_1:+78876914 | Msa0046610:CDS |
| ATCAAGGAAGTTGGTCCTGA+TGG | 0.431165 | 1_1:+78877835 | Msa0046610:intron |
| AACAAGGGAGGGACAATTGA+TGG | 0.436523 | 1_1:-78879964 | None:intergenic |
| GAGTCATCGTCGTGTCGTTA+GGG | 0.439310 | 1_1:-78876683 | None:intergenic |
| TTGGTCACCTCTTTCCCATC+AGG | 0.445899 | 1_1:-78877850 | None:intergenic |
| TATTCTGCATGGGCCCACTA+TGG | 0.447428 | 1_1:-78876567 | None:intergenic |
| TACATGCGACATTCCAAATT+CGG | 0.447544 | 1_1:-78876705 | None:intergenic |
| AGCGAAGAGGAAGAAGATAC+TGG | 0.461576 | 1_1:+78879728 | Msa0046610:CDS |
| AATATCTTGTGCTCGTAGTA+AGG | 0.469535 | 1_1:+78879799 | Msa0046610:three_prime_UTR |
| ATCACCGCCGTGTCTACCTC+CGG | 0.475798 | 1_1:-78876741 | None:intergenic |
| GCGCCATGTTGCTGAAACCT+TGG | 0.480117 | 1_1:+78877037 | Msa0046610:CDS |
| ACGAAGAACCATCACCGGTT+CGG | 0.483555 | 1_1:-78876904 | None:intergenic |
| TTAGGGTTACCTCTAAATCA+AGG | 0.493568 | 1_1:-78877061 | None:intergenic |
| CAAGGTTGGTCGAACCGAAC+CGG | 0.495331 | 1_1:+78876890 | Msa0046610:CDS |
| AACTTGGAATTTCTTGAAGA+GGG | 0.504873 | 1_1:+78879903 | Msa0046610:three_prime_UTR |
| GAATTGGAGTAATTGGAAAT+GGG | 0.508183 | 1_1:-78879667 | None:intergenic |
| TTTCAACAAACTATTCTGCA+TGG | 0.511804 | 1_1:-78876578 | None:intergenic |
| AATCCGACGGCGAGAAAGCT+CGG | 0.518163 | 1_1:-78876847 | None:intergenic |
| GTGGTTGTATTATACAAACT+TGG | 0.519431 | 1_1:+78879887 | Msa0046610:three_prime_UTR |
| TGGTCGAACCGAACCGGTGA+TGG | 0.521410 | 1_1:+78876896 | Msa0046610:CDS |
| GTTCAGGATGTTGATGGTGA+TGG | 0.524790 | 1_1:+78879644 | Msa0046610:intron |
| AGGGTATTCAATCCAAACTT+AGG | 0.525613 | 1_1:+78879922 | Msa0046610:three_prime_UTR |
| GCAACAAGTTTAATTTCCAC+AGG | 0.530344 | 1_1:-78878184 | None:intergenic |
| AGACACGGCGGTGATGATAC+AGG | 0.531434 | 1_1:+78876749 | Msa0046610:CDS |
| TTCACTTCTTCAGACACAGC+AGG | 0.534360 | 1_1:-78877880 | None:intergenic |
| GGAGAATGGTAATGCGATAA+CGG | 0.541365 | 1_1:+78879769 | Msa0046610:CDS |
| TCTCCGAGCTTTCTCGCCGT+CGG | 0.541543 | 1_1:+78876844 | Msa0046610:CDS |
| TTCAACAAACTATTCTGCAT+GGG | 0.542204 | 1_1:-78876577 | None:intergenic |
| GAGGAAGAAGATACTGGAAT+GGG | 0.545249 | 1_1:+78879734 | Msa0046610:CDS |
| AGAGGAAGAAGATACTGGAA+TGG | 0.546061 | 1_1:+78879733 | Msa0046610:CDS |
| ATATTCAAACTTGTGAAGAA+AGG | 0.548905 | 1_1:+78876982 | Msa0046610:CDS |
| TCAAGGAAGTTGGTCCTGAT+GGG | 0.550624 | 1_1:+78877836 | Msa0046610:intron |
| TAGTGTTAGCAGTCTCATCA+AGG | 0.550744 | 1_1:+78876872 | Msa0046610:CDS |
| CCCTCAGCCATTCAAAATCA+GGG | 0.554422 | 1_1:+78877939 | Msa0046610:CDS |
| ATGCGTGAAATCAAGGAAGT+TGG | 0.555539 | 1_1:+78877826 | Msa0046610:intron |
| AGAAGATACTGGAATGGGTG+AGG | 0.555757 | 1_1:+78879739 | Msa0046610:CDS |
| AGTTGGTCCTGATGGGAAAG+AGG | 0.557167 | 1_1:+78877843 | Msa0046610:CDS |
| TGATTCAGTGCAACAAGCAA+TGG | 0.557551 | 1_1:-78879414 | None:intergenic |
| AAACTTGGAATTTCTTGAAG+AGG | 0.557971 | 1_1:+78879902 | Msa0046610:three_prime_UTR |
| TACCTCTAAATCAAGGTCCA+AGG | 0.561386 | 1_1:-78877054 | None:intergenic |
| GGTGAGGTTGATGTGGAGAA+TGG | 0.561962 | 1_1:+78879755 | Msa0046610:CDS |
| GAGTGGTAAGCACGTAAAGT+GGG | 0.562262 | 1_1:-78878210 | None:intergenic |
| GGTCAAGAACATCGCCGACA+TGG | 0.563147 | 1_1:+78876770 | Msa0046610:CDS |
| TGGAATGGGTGAGGTTGATG+TGG | 0.564408 | 1_1:+78879748 | Msa0046610:CDS |
| TGGGCCCACTATGGTTATGT+TGG | 0.568883 | 1_1:-78876558 | None:intergenic |
| CATCGATCTCAGTAAACGTA+GGG | 0.571270 | 1_1:+78876947 | Msa0046610:CDS |
| ATATTGCACCAACCTTGTCA+AGG | 0.574181 | 1_1:-78878237 | None:intergenic |
| TTTGCAGGAGGCAATGCGGA+AGG | 0.576765 | 1_1:+78878135 | Msa0046610:intron |
| TGAGTGGTAAGCACGTAAAG+TGG | 0.581027 | 1_1:-78878211 | None:intergenic |
| TATTGCACCAACCTTGTCAA+GGG | 0.581569 | 1_1:-78878236 | None:intergenic |
| CAGTAAACGTAGGGTTTCTG+AGG | 0.593131 | 1_1:+78876956 | Msa0046610:CDS |
| GTTAGCAGTCTCATCAAGGT+TGG | 0.595645 | 1_1:+78876876 | Msa0046610:CDS |
| GGTCCAAGGTTTCAGCAACA+TGG | 0.598496 | 1_1:-78877040 | None:intergenic |
| GGGTAAACTTACGCTGGTGA+AGG | 0.600874 | 1_1:+78879451 | Msa0046610:CDS |
| GTCAAGAACATCGCCGACAT+GGG | 0.601836 | 1_1:+78876771 | Msa0046610:CDS |
| TTTGGAATGTCGCATGTACG+AGG | 0.605656 | 1_1:+78876710 | Msa0046610:CDS |
| TCACCGCCGTGTCTACCTCC+GGG | 0.606317 | 1_1:-78876740 | None:intergenic |
| CTCGAATACAACAACATCGA+GGG | 0.610805 | 1_1:+78876810 | Msa0046610:CDS |
| CATGTACGAGGAAAGGTACC+CGG | 0.616225 | 1_1:+78876722 | Msa0046610:CDS |
| TAGCGATGAAGACAGCGAAG+AGG | 0.620674 | 1_1:+78879715 | Msa0046610:CDS |
| AGACACAGCAGGTACGACCT+TGG | 0.622171 | 1_1:-78877869 | None:intergenic |
| TTACAATCTTGACAGGAGCA+AGG | 0.623412 | 1_1:+78879371 | Msa0046610:intron |
| TACCACTCAGACCCTTGACA+AGG | 0.630530 | 1_1:+78878225 | Msa0046610:CDS |
| AAGGTACCCGGAGGTAGACA+CGG | 0.630681 | 1_1:+78876734 | Msa0046610:CDS |
| AGTGGTAAGCACGTAAAGTG+GGG | 0.633322 | 1_1:-78878209 | None:intergenic |
| AACCTTGTCAAGGGTCTGAG+TGG | 0.636634 | 1_1:-78878227 | None:intergenic |
| TCAACACGAAGAACCATCAC+CGG | 0.639120 | 1_1:-78876909 | None:intergenic |
| ACATCGATCTCAGTAAACGT+AGG | 0.644319 | 1_1:+78876946 | Msa0046610:CDS |
| AATGTCGCATGTACGAGGAA+AGG | 0.654321 | 1_1:+78876715 | Msa0046610:CDS |
| AGGACAGTCATCATTTCCAG+CGG | 0.656570 | 1_1:-78878164 | None:intergenic |
| TCAGGATGAAGATAATGATG+AGG | 0.671046 | 1_1:+78879688 | Msa0046610:CDS |
| ACACAAGGGTAAACTTACGC+TGG | 0.674156 | 1_1:+78879445 | Msa0046610:CDS |
| AAGGCATAGATAGTACAGCA+AGG | 0.680632 | 1_1:+78879818 | Msa0046610:three_prime_UTR |
| TGGAAATGATGACTGTCCTG+TGG | 0.683670 | 1_1:+78878168 | Msa0046610:CDS |
| GTGGTAAGCACGTAAAGTGG+GGG | 0.684133 | 1_1:-78878208 | None:intergenic |
| TGATGGGAAAGAGGTGACCA+AGG | 0.688614 | 1_1:+78877852 | Msa0046610:CDS |
| TGAAACGTAAGCACCCATGT+CGG | 0.693439 | 1_1:-78876784 | None:intergenic |
| TGCTAACACTACGAATCCGA+CGG | 0.714176 | 1_1:-78876860 | None:intergenic |
| AAGGGAGGGACAATTGATGG+CGG | 0.714702 | 1_1:-78879961 | None:intergenic |
| TCTCGAATACAACAACATCG+AGG | 0.733290 | 1_1:+78876809 | Msa0046610:CDS |
| GCTGGTGAAGGAAATTAGAG+CGG | 0.734842 | 1_1:+78879463 | Msa0046610:CDS |
| TCAGCCATTCAAAATCAGGG+CGG | 0.779991 | 1_1:+78877942 | Msa0046610:CDS |
| GTACGAGGAAAGGTACCCGG+AGG | 0.786179 | 1_1:+78876725 | Msa0046610:CDS |
| GTACCCGGAGGTAGACACGG+CGG | 0.819031 | 1_1:+78876737 | Msa0046610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAGAAATAAAAAATA+GGG | - | chr1_1:78877100-78877119 | None:intergenic | 10.0% |
| !! | TGAAAAAAGAAATAAAAAAT+AGG | - | chr1_1:78877101-78877120 | None:intergenic | 10.0% |
| !!! | TTGTTTTTAATAATTTAGAA+CGG | + | chr1_1:78877333-78877352 | Msa0046610:intron | 10.0% |
| !! | TATGTTAATTGAATTTGATA+TGG | + | chr1_1:78877137-78877156 | Msa0046610:intron | 15.0% |
| !!! | TTTTTTTAAACACTTTTTGA+TGG | + | chr1_1:78877239-78877258 | Msa0046610:intron | 15.0% |
| !!! | TTTTATTTCATCTTATGTTT+TGG | - | chr1_1:78877549-78877568 | None:intergenic | 15.0% |
| !! | AATTAGTTGAAAACAATTTA+TGG | + | chr1_1:78877635-78877654 | Msa0046610:intron | 15.0% |
| !! | ATTAGTTGAAAACAATTTAT+GGG | + | chr1_1:78877636-78877655 | Msa0046610:intron | 15.0% |
| !!! | TTCTTTTTTCTTCTATATTT+TGG | + | chr1_1:78878037-78878056 | Msa0046610:intron | 15.0% |
| !!! | TATCATGTTTTATAATCATT+TGG | + | chr1_1:78878111-78878130 | Msa0046610:intron | 15.0% |
| !!! | TATAGCTTTTAGATAAAATA+AGG | + | chr1_1:78878759-78878778 | Msa0046610:intron | 15.0% |
| !!! | TTTTTTATCTCTTTTAATTG+TGG | + | chr1_1:78879868-78879887 | Msa0046610:three_prime_UTR | 15.0% |
| !!! | AGGGTTTTCTTAATTAATTA+GGG | - | chr1_1:78877081-78877100 | None:intergenic | 20.0% |
| !!! | TAGGGTTTTCTTAATTAATT+AGG | - | chr1_1:78877082-78877101 | None:intergenic | 20.0% |
| !!! | TTTTTTCATTGATAGTGTTT+TGG | + | chr1_1:78877113-78877132 | Msa0046610:intron | 20.0% |
| !!! | TTTTTAATAATTTAGAACGG+AGG | + | chr1_1:78877336-78877355 | Msa0046610:intron | 20.0% |
| !!! | TTATGCCATTTATTCAAATA+GGG | - | chr1_1:78877505-78877524 | None:intergenic | 20.0% |
| !!! | CTAATTTTCATAAAATCTCT+AGG | - | chr1_1:78877621-78877640 | None:intergenic | 20.0% |
| !! | TACAATAAAGTTCATGATAT+AGG | - | chr1_1:78877753-78877772 | None:intergenic | 20.0% |
| !!! | ATGAAATGTTTTCAATTTGA+TGG | + | chr1_1:78877973-78877992 | Msa0046610:CDS | 20.0% |
| !! | GTTCAATTTCATAATTACTT+TGG | + | chr1_1:78878269-78878288 | Msa0046610:intron | 20.0% |
| !!! | TTTAGAACAAGTTTTTGAAT+TGG | - | chr1_1:78878724-78878743 | None:intergenic | 20.0% |
| !! | ATCAATCACTCTATTTATTT+AGG | - | chr1_1:78878891-78878910 | None:intergenic | 20.0% |
| !!! | ATATTTTGTCATTTAGAACA+TGG | + | chr1_1:78879078-78879097 | Msa0046610:intron | 20.0% |
| ! | ATATTCAAACTTGTGAAGAA+AGG | + | chr1_1:78876982-78877001 | Msa0046610:CDS | 25.0% |
| ! | TGAATTTGATATGGATTTGT+AGG | + | chr1_1:78877146-78877165 | Msa0046610:intron | 25.0% |
| !! | GTTATGCCATTTATTCAAAT+AGG | - | chr1_1:78877506-78877525 | None:intergenic | 25.0% |
| !! | TTCTAAAAAGATCTCCTAAA+CGG | + | chr1_1:78877674-78877693 | Msa0046610:intron | 25.0% |
| ! | TGATGGAATTATACACATTA+AGG | + | chr1_1:78877990-78878009 | Msa0046610:CDS | 25.0% |
| !!! | TTATAATCATTTGGTTTTGC+AGG | + | chr1_1:78878120-78878139 | Msa0046610:intron | 25.0% |
| ! | ACACTAATCCTATATAAGTA+CGG | + | chr1_1:78878850-78878869 | Msa0046610:intron | 25.0% |
| ! | AATTATATCAGCAAGTTATG+AGG | + | chr1_1:78879110-78879129 | Msa0046610:intron | 25.0% |
| !!! | TTTTGTTATCATCAGTAAGT+TGG | - | chr1_1:78879210-78879229 | None:intergenic | 25.0% |
| ! | CAATGAGATTCTGTTATTAT+AGG | - | chr1_1:78879233-78879252 | None:intergenic | 25.0% |
| ! | GTTATGAAGAATACTTATTG+TGG | - | chr1_1:78879285-78879304 | None:intergenic | 25.0% |
| ! | AATAAGTATTCTTCATAACC+TGG | + | chr1_1:78879286-78879305 | Msa0046610:intron | 25.0% |
| ! | TGAATCAATAGAAAAACACA+AGG | + | chr1_1:78879430-78879449 | Msa0046610:CDS | 25.0% |
| ! | GAATCAATAGAAAAACACAA+GGG | + | chr1_1:78879431-78879450 | Msa0046610:CDS | 25.0% |
| ! | TACTCATATATCGACATAAA+AGG | - | chr1_1:78879574-78879593 | None:intergenic | 25.0% |
| ! | AGAATTACAAGTGTTTATTG+AGG | + | chr1_1:78879593-78879612 | Msa0046610:intron | 25.0% |
| !! | CTTTACTAATTTTGCTCTAT+TGG | + | chr1_1:78879841-78879860 | Msa0046610:three_prime_UTR | 25.0% |
| ! | ATTTTCCAACATAACCATAG+TGG | + | chr1_1:78876553-78876572 | Msa0046610:five_prime_UTR | 30.0% |
| ! | TTTTCCAACATAACCATAGT+GGG | + | chr1_1:78876554-78876573 | Msa0046610:five_prime_UTR | 30.0% |
| TTCAACAAACTATTCTGCAT+GGG | - | chr1_1:78876580-78876599 | None:intergenic | 30.0% | |
| TTTCAACAAACTATTCTGCA+TGG | - | chr1_1:78876581-78876600 | None:intergenic | 30.0% | |
| ! | GTGGTTTAGTTAAGTTTTCT+CGG | - | chr1_1:78876636-78876655 | None:intergenic | 30.0% |
| !!! | GTTAGGGTTTTGATTTGTTT+TGG | - | chr1_1:78876670-78876689 | None:intergenic | 30.0% |
| TAGGATCTTTATGTTCACAT+TGG | + | chr1_1:78877165-78877184 | Msa0046610:intron | 30.0% | |
| ATCTTTATGTTCACATTGGA+TGG | + | chr1_1:78877169-78877188 | Msa0046610:intron | 30.0% | |
| !! | GTTCCTAAGGTTCTAAAAAT+CGG | + | chr1_1:78877261-78877280 | Msa0046610:intron | 30.0% |
| !!! | AAACCGATTTTTAGAACCTT+AGG | - | chr1_1:78877267-78877286 | None:intergenic | 30.0% |
| ! | TCCTTGACTTTTTGTAAGTT+AGG | + | chr1_1:78877479-78877498 | Msa0046610:intron | 30.0% |
| TTAGGCCCTATTTGAATAAA+TGG | + | chr1_1:78877497-78877516 | Msa0046610:intron | 30.0% | |
| ATCTACCAGTATAAACACTA+GGG | - | chr1_1:78877703-78877722 | None:intergenic | 30.0% | |
| TATCTACCAGTATAAACACT+AGG | - | chr1_1:78877704-78877723 | None:intergenic | 30.0% | |
| ! | GTTCATGATATAGGTTTGTT+TGG | - | chr1_1:78877744-78877763 | None:intergenic | 30.0% |
| TCATGAACTTTATTGTATGC+AGG | + | chr1_1:78877756-78877775 | Msa0046610:intron | 30.0% | |
| ATAGACACTGAAAAGAAAAG+TGG | - | chr1_1:78878076-78878095 | None:intergenic | 30.0% | |
| !! | TCAGTGTCTATTTGTTATGT+AGG | + | chr1_1:78878085-78878104 | Msa0046610:intron | 30.0% |
| AACTGAATTAAGTGCACAAT+TGG | + | chr1_1:78878292-78878311 | Msa0046610:intron | 30.0% | |
| ! | TATAATCTTGATAGCCTCAA+AGG | - | chr1_1:78878318-78878337 | None:intergenic | 30.0% |
| CTTGTGATGTTTGTGTTTAT+TGG | + | chr1_1:78878361-78878380 | Msa0046610:intron | 30.0% | |
| GATGTTTGTGTTTATTGGAT+TGG | + | chr1_1:78878366-78878385 | Msa0046610:intron | 30.0% | |
| ! | TGTTTATTGGATTGGATTGT+GGG | + | chr1_1:78878374-78878393 | Msa0046610:intron | 30.0% |
| !! | GTCATTTTCATCTAACAACT+AGG | + | chr1_1:78878397-78878416 | Msa0046610:intron | 30.0% |
| AGGAGAAGAAATGTTGTTAT+TGG | + | chr1_1:78878779-78878798 | Msa0046610:intron | 30.0% | |
| CAATGTATCCGTACTTATAT+AGG | - | chr1_1:78878861-78878880 | None:intergenic | 30.0% | |
| ATGAGGATCAATGAATACTA+AGG | + | chr1_1:78879127-78879146 | Msa0046610:intron | 30.0% | |
| TTACAACTTACAATCTTGAC+AGG | + | chr1_1:78879364-78879383 | Msa0046610:intron | 30.0% | |
| AGAAGATAAAGGATAAAGAG+AGG | - | chr1_1:78879502-78879521 | None:intergenic | 30.0% | |
| CGCAGATATATAGAAGATAA+AGG | - | chr1_1:78879513-78879532 | None:intergenic | 30.0% | |
| ! | AAATTTTGTCCATCTGCTTT+TGG | + | chr1_1:78879536-78879555 | Msa0046610:intron | 30.0% |
| GAATTGGAGTAATTGGAAAT+GGG | - | chr1_1:78879670-78879689 | None:intergenic | 30.0% | |
| TGAATTGGAGTAATTGGAAA+TGG | - | chr1_1:78879671-78879690 | None:intergenic | 30.0% | |
| ATTTCCAATTACTCCAATTC+AGG | + | chr1_1:78879670-78879689 | Msa0046610:CDS | 30.0% | |
| TCATTATCTTCATCCTGAAT+TGG | - | chr1_1:78879686-78879705 | None:intergenic | 30.0% | |
| GTGGTTGTATTATACAAACT+TGG | + | chr1_1:78879887-78879906 | Msa0046610:three_prime_UTR | 30.0% | |
| AAACTTGGAATTTCTTGAAG+AGG | + | chr1_1:78879902-78879921 | Msa0046610:three_prime_UTR | 30.0% | |
| AACTTGGAATTTCTTGAAGA+GGG | + | chr1_1:78879903-78879922 | Msa0046610:three_prime_UTR | 30.0% | |
| TACATGCGACATTCCAAATT+CGG | - | chr1_1:78876708-78876727 | None:intergenic | 35.0% | |
| ! | CTTCGTGTTGATAAGGAAAA+AGG | + | chr1_1:78876921-78876940 | Msa0046610:CDS | 35.0% |
| TTAGGGTTACCTCTAAATCA+AGG | - | chr1_1:78877064-78877083 | None:intergenic | 35.0% | |
| !! | ACACTTTTTGATGGTTCCTA+AGG | + | chr1_1:78877248-78877267 | Msa0046610:intron | 35.0% |
| CAAAATCGCAAATCTTTACG+TGG | + | chr1_1:78877430-78877449 | Msa0046610:intron | 35.0% | |
| TACAAAAAGTCAAGGAACAG+AGG | - | chr1_1:78877475-78877494 | None:intergenic | 35.0% | |
| GCCTAACTTACAAAAAGTCA+AGG | - | chr1_1:78877483-78877502 | None:intergenic | 35.0% | |
| !!! | TAATCATTTGGTTTTGCAGG+AGG | + | chr1_1:78878123-78878142 | Msa0046610:intron | 35.0% |
| ! | GCAACAAGTTTAATTTCCAC+AGG | - | chr1_1:78878187-78878206 | None:intergenic | 35.0% |
| ! | GTGTTTATTGGATTGGATTG+TGG | + | chr1_1:78878373-78878392 | Msa0046610:intron | 35.0% |
| ! | GTTTATTGGATTGGATTGTG+GGG | + | chr1_1:78878375-78878394 | Msa0046610:intron | 35.0% |
| !! | GATTTGATTTTGCCGAACTT+TGG | - | chr1_1:78878508-78878527 | None:intergenic | 35.0% |
| ! | AGAATAGTTGGCTTCAGTTT+GGG | - | chr1_1:78878549-78878568 | None:intergenic | 35.0% |
| ! | AAGAATAGTTGGCTTCAGTT+TGG | - | chr1_1:78878550-78878569 | None:intergenic | 35.0% |
| AACTGAAGCCAACTATTCTT+TGG | + | chr1_1:78878550-78878569 | Msa0046610:intron | 35.0% | |
| AAGCCAACTATTCTTTGGTT+TGG | + | chr1_1:78878555-78878574 | Msa0046610:intron | 35.0% | |
| GTTCAGCATAAAAAACAGCT+TGG | - | chr1_1:78878665-78878684 | None:intergenic | 35.0% | |
| TTGAGATCGCAAAACAGATT+CGG | + | chr1_1:78878942-78878961 | Msa0046610:intron | 35.0% | |
| GATAAAGGATAAAGAGAGGA+TGG | - | chr1_1:78879498-78879517 | None:intergenic | 35.0% | |
| AGTGTTTATTGAGGAGAAAG+AGG | + | chr1_1:78879602-78879621 | Msa0046610:intron | 35.0% | |
| TCATCCTGAATTGGAGTAAT+TGG | - | chr1_1:78879677-78879696 | None:intergenic | 35.0% | |
| TCAGGATGAAGATAATGATG+AGG | + | chr1_1:78879688-78879707 | Msa0046610:CDS | 35.0% | |
| AATATCTTGTGCTCGTAGTA+AGG | + | chr1_1:78879799-78879818 | Msa0046610:three_prime_UTR | 35.0% | |
| ! | AGGGTATTCAATCCAAACTT+AGG | + | chr1_1:78879922-78879941 | Msa0046610:three_prime_UTR | 35.0% |
| AATCCAAACTTAGGAGTTTG+TGG | + | chr1_1:78879931-78879950 | Msa0046610:three_prime_UTR | 35.0% | |
| TATCCACAAACTCCTAAGTT+TGG | - | chr1_1:78879937-78879956 | None:intergenic | 35.0% | |
| TCTCGAATACAACAACATCG+AGG | + | chr1_1:78876809-78876828 | Msa0046610:CDS | 40.0% | |
| CTCGAATACAACAACATCGA+GGG | + | chr1_1:78876810-78876829 | Msa0046610:CDS | 40.0% | |
| TAGTGTTAGCAGTCTCATCA+AGG | + | chr1_1:78876872-78876891 | Msa0046610:CDS | 40.0% | |
| ! | GATGGTTCTTCGTGTTGATA+AGG | + | chr1_1:78876914-78876933 | Msa0046610:CDS | 40.0% |
| ACATCGATCTCAGTAAACGT+AGG | + | chr1_1:78876946-78876965 | Msa0046610:CDS | 40.0% | |
| CATCGATCTCAGTAAACGTA+GGG | + | chr1_1:78876947-78876966 | Msa0046610:CDS | 40.0% | |
| AACCTTGGACCTTGATTTAG+AGG | + | chr1_1:78877052-78877071 | Msa0046610:CDS | 40.0% | |
| TACCTCTAAATCAAGGTCCA+AGG | - | chr1_1:78877057-78877076 | None:intergenic | 40.0% | |
| TGGCCTTTGTATCGCAAATA+CGG | + | chr1_1:78877189-78877208 | Msa0046610:intron | 40.0% | |
| TGACCGTATTTGCGATACAA+AGG | - | chr1_1:78877195-78877214 | None:intergenic | 40.0% | |
| ! | CAAATACGGTCATGCTTTTG+AGG | + | chr1_1:78877203-78877222 | Msa0046610:intron | 40.0% |
| !! | TTTTGTCGCAGCTGTTTTCA+CGG | - | chr1_1:78877293-78877312 | None:intergenic | 40.0% |
| TGAAAACAGCTGCGACAAAA+AGG | + | chr1_1:78877293-78877312 | Msa0046610:intron | 40.0% | |
| !!! | GAGGTTTTGAATAGCGTTTG+AGG | - | chr1_1:78877456-78877475 | None:intergenic | 40.0% |
| AAACACTAGGGATACCGTTT+AGG | - | chr1_1:78877691-78877710 | None:intergenic | 40.0% | |
| GGTATCCCTAGTGTTTATAC+TGG | + | chr1_1:78877695-78877714 | Msa0046610:intron | 40.0% | |
| GCTGAAAACTGTATCAGGAT+CGG | - | chr1_1:78877800-78877819 | None:intergenic | 40.0% | |
| CCTTGATTTCACGCATTAGT+GGG | - | chr1_1:78877822-78877841 | None:intergenic | 40.0% | |
| TCCTTGATTTCACGCATTAG+TGG | - | chr1_1:78877823-78877842 | None:intergenic | 40.0% | |
| ATGCGTGAAATCAAGGAAGT+TGG | + | chr1_1:78877826-78877845 | Msa0046610:intron | 40.0% | |
| TATTGCACCAACCTTGTCAA+GGG | - | chr1_1:78878239-78878258 | None:intergenic | 40.0% | |
| ATATTGCACCAACCTTGTCA+AGG | - | chr1_1:78878240-78878259 | None:intergenic | 40.0% | |
| GTTGACTACCACATGAAACT+TGG | + | chr1_1:78878443-78878462 | Msa0046610:intron | 40.0% | |
| TACCACATGAAACTTGGCAT+TGG | + | chr1_1:78878449-78878468 | Msa0046610:intron | 40.0% | |
| AACTGAACCTAGCCAAAGTT+CGG | + | chr1_1:78878493-78878512 | Msa0046610:intron | 40.0% | |
| TCGGCAAAATCAAATCGAAC+CGG | + | chr1_1:78878512-78878531 | Msa0046610:intron | 40.0% | |
| AAATCAAATCGAACCGGTAC+CGG | + | chr1_1:78878518-78878537 | Msa0046610:intron | 40.0% | |
| GCACCAAACCAAAGAATAGT+TGG | - | chr1_1:78878561-78878580 | None:intergenic | 40.0% | |
| !! | ATTCTTTGGTTTGGTGCAGT+TGG | + | chr1_1:78878564-78878583 | Msa0046610:intron | 40.0% |
| TAGATGTTCAGTTCGCATAC+AGG | - | chr1_1:78878613-78878632 | None:intergenic | 40.0% | |
| TGAGATCGCAAAACAGATTC+GGG | + | chr1_1:78878943-78878962 | Msa0046610:intron | 40.0% | |
| !! | TCATCAGTAAGTTGGTAGCT+TGG | - | chr1_1:78879202-78879221 | None:intergenic | 40.0% |
| TCGAATTTGTCTTCAAGTGC+AGG | - | chr1_1:78879258-78879277 | None:intergenic | 40.0% | |
| ACATCATTGCTAGTCATTCC+AGG | - | chr1_1:78879307-78879326 | None:intergenic | 40.0% | |
| TTACAATCTTGACAGGAGCA+AGG | + | chr1_1:78879371-78879390 | Msa0046610:intron | 40.0% | |
| TTGACAGGAGCAAGGAAAAT+TGG | + | chr1_1:78879379-78879398 | Msa0046610:intron | 40.0% | |
| TGATTCAGTGCAACAAGCAA+TGG | - | chr1_1:78879417-78879436 | None:intergenic | 40.0% | |
| GAAGAGAATCCAAAAGCAGA+TGG | - | chr1_1:78879548-78879567 | None:intergenic | 40.0% | |
| ! | GACAATGCATTGTGTTGTTC+AGG | + | chr1_1:78879628-78879647 | Msa0046610:intron | 40.0% |
| ! | TGTGTTGTTCAGGATGTTGA+TGG | + | chr1_1:78879638-78879657 | Msa0046610:intron | 40.0% |
| AGAGGAAGAAGATACTGGAA+TGG | + | chr1_1:78879733-78879752 | Msa0046610:CDS | 40.0% | |
| GAGGAAGAAGATACTGGAAT+GGG | + | chr1_1:78879734-78879753 | Msa0046610:CDS | 40.0% | |
| ! | GGAGAATGGTAATGCGATAA+CGG | + | chr1_1:78879769-78879788 | Msa0046610:CDS | 40.0% |
| AAGGCATAGATAGTACAGCA+AGG | + | chr1_1:78879818-78879837 | Msa0046610:three_prime_UTR | 40.0% | |
| !!! | TGTTTTGGTGAGTGAGTGAG+TGG | - | chr1_1:78876655-78876674 | None:intergenic | 45.0% |
| ! | TTTGGAATGTCGCATGTACG+AGG | + | chr1_1:78876710-78876729 | Msa0046610:CDS | 45.0% |
| AATGTCGCATGTACGAGGAA+AGG | + | chr1_1:78876715-78876734 | Msa0046610:CDS | 45.0% | |
| TGAAACGTAAGCACCCATGT+CGG | - | chr1_1:78876787-78876806 | None:intergenic | 45.0% | |
| TGCTAACACTACGAATCCGA+CGG | - | chr1_1:78876863-78876882 | None:intergenic | 45.0% | |
| GTTAGCAGTCTCATCAAGGT+TGG | + | chr1_1:78876876-78876895 | Msa0046610:CDS | 45.0% | |
| TCAACACGAAGAACCATCAC+CGG | - | chr1_1:78876912-78876931 | None:intergenic | 45.0% | |
| CAGTAAACGTAGGGTTTCTG+AGG | + | chr1_1:78876956-78876975 | Msa0046610:CDS | 45.0% | |
| ! | CAGCTGCGACAAAAAGGTAT+AGG | + | chr1_1:78877299-78877318 | Msa0046610:intron | 45.0% |
| !! | AGTGGGCTGAAAACTGTATC+AGG | - | chr1_1:78877805-78877824 | None:intergenic | 45.0% |
| CCCACTAATGCGTGAAATCA+AGG | + | chr1_1:78877819-78877838 | Msa0046610:intron | 45.0% | |
| ! | ATCAAGGAAGTTGGTCCTGA+TGG | + | chr1_1:78877835-78877854 | Msa0046610:intron | 45.0% |
| ! | TCAAGGAAGTTGGTCCTGAT+GGG | + | chr1_1:78877836-78877855 | Msa0046610:intron | 45.0% |
| TTCACTTCTTCAGACACAGC+AGG | - | chr1_1:78877883-78877902 | None:intergenic | 45.0% | |
| ! | CCTGATTTTGAATGGCTGAG+GGG | - | chr1_1:78877941-78877960 | None:intergenic | 45.0% |
| ! | CCCTGATTTTGAATGGCTGA+GGG | - | chr1_1:78877942-78877961 | None:intergenic | 45.0% |
| CCCTCAGCCATTCAAAATCA+GGG | + | chr1_1:78877939-78877958 | Msa0046610:CDS | 45.0% | |
| TCAGCCATTCAAAATCAGGG+CGG | + | chr1_1:78877942-78877961 | Msa0046610:CDS | 45.0% | |
| ! | ATGTCCGCCCTGATTTTGAA+TGG | - | chr1_1:78877949-78877968 | None:intergenic | 45.0% |
| AGGACAGTCATCATTTCCAG+CGG | - | chr1_1:78878167-78878186 | None:intergenic | 45.0% | |
| TGGAAATGATGACTGTCCTG+TGG | + | chr1_1:78878168-78878187 | Msa0046610:CDS | 45.0% | |
| AGTGGTAAGCACGTAAAGTG+GGG | - | chr1_1:78878212-78878231 | None:intergenic | 45.0% | |
| GAGTGGTAAGCACGTAAAGT+GGG | - | chr1_1:78878213-78878232 | None:intergenic | 45.0% | |
| TGAGTGGTAAGCACGTAAAG+TGG | - | chr1_1:78878214-78878233 | None:intergenic | 45.0% | |
| !! | AAGTGCACAATTGGCCTTTG+AGG | + | chr1_1:78878301-78878320 | Msa0046610:intron | 45.0% |
| CACCAATGCCAAGTTTCATG+TGG | - | chr1_1:78878454-78878473 | None:intergenic | 45.0% | |
| ! | GATTTTGCCGAACTTTGGCT+AGG | - | chr1_1:78878503-78878522 | None:intergenic | 45.0% |
| TGTTCAGTTCGCATACAGGA+CGG | - | chr1_1:78878609-78878628 | None:intergenic | 45.0% | |
| ! | TGGTTTGCACAGTAGCAGTT+TGG | - | chr1_1:78878645-78878664 | None:intergenic | 45.0% |
| GGTAAGTCTAAGAGCTGAGT+TGG | - | chr1_1:78879021-78879040 | None:intergenic | 45.0% | |
| !!! | GTTGTTTTTCTGCAGAGCGT+GGG | - | chr1_1:78879051-78879070 | None:intergenic | 45.0% |
| !!! | AGTTGTTTTTCTGCAGAGCG+TGG | - | chr1_1:78879052-78879071 | None:intergenic | 45.0% |
| ! | TGCTCTTGAGAAGACTTGCT+TGG | + | chr1_1:78879170-78879189 | Msa0046610:intron | 45.0% |
| ACACAAGGGTAAACTTACGC+TGG | + | chr1_1:78879445-78879464 | Msa0046610:CDS | 45.0% | |
| GCTGGTGAAGGAAATTAGAG+CGG | + | chr1_1:78879463-78879482 | Msa0046610:CDS | 45.0% | |
| !! | GTTCAGGATGTTGATGGTGA+TGG | + | chr1_1:78879644-78879663 | Msa0046610:intron | 45.0% |
| AGCGAAGAGGAAGAAGATAC+TGG | + | chr1_1:78879728-78879747 | Msa0046610:CDS | 45.0% | |
| AGAAGATACTGGAATGGGTG+AGG | + | chr1_1:78879739-78879758 | Msa0046610:CDS | 45.0% | |
| TGGGCCCACTATGGTTATGT+TGG | - | chr1_1:78876561-78876580 | None:intergenic | 50.0% | |
| TATTCTGCATGGGCCCACTA+TGG | - | chr1_1:78876570-78876589 | None:intergenic | 50.0% | |
| ! | GAGTCATCGTCGTGTCGTTA+GGG | - | chr1_1:78876686-78876705 | None:intergenic | 50.0% |
| CACGACGATGACTCCGAATT+TGG | + | chr1_1:78876692-78876711 | Msa0046610:exon | 50.0% | |
| !! | CATGTACGAGGAAAGGTACC+CGG | + | chr1_1:78876722-78876741 | Msa0046610:CDS | 50.0% |
| GTCAAGAACATCGCCGACAT+GGG | + | chr1_1:78876771-78876790 | Msa0046610:CDS | 50.0% | |
| ! | ACGAAGAACCATCACCGGTT+CGG | - | chr1_1:78876907-78876926 | None:intergenic | 50.0% |
| GGTCCAAGGTTTCAGCAACA+TGG | - | chr1_1:78877043-78877062 | None:intergenic | 50.0% | |
| AGTTGGTCCTGATGGGAAAG+AGG | + | chr1_1:78877843-78877862 | Msa0046610:CDS | 50.0% | |
| TTGGTCACCTCTTTCCCATC+AGG | - | chr1_1:78877853-78877872 | None:intergenic | 50.0% | |
| TGATGGGAAAGAGGTGACCA+AGG | + | chr1_1:78877852-78877871 | Msa0046610:CDS | 50.0% | |
| CCCCTCAGCCATTCAAAATC+AGG | + | chr1_1:78877938-78877957 | Msa0046610:CDS | 50.0% | |
| ! | GCCCTGATTTTGAATGGCTG+AGG | - | chr1_1:78877943-78877962 | None:intergenic | 50.0% |
| !! | TGGTTTTGCAGGAGGCAATG+CGG | + | chr1_1:78878131-78878150 | Msa0046610:intron | 50.0% |
| GTGGTAAGCACGTAAAGTGG+GGG | - | chr1_1:78878211-78878230 | None:intergenic | 50.0% | |
| TACCACTCAGACCCTTGACA+AGG | + | chr1_1:78878225-78878244 | Msa0046610:CDS | 50.0% | |
| AACCTTGTCAAGGGTCTGAG+TGG | - | chr1_1:78878230-78878249 | None:intergenic | 50.0% | |
| ACTCAGACCCTTGACAAGGT+TGG | + | chr1_1:78878229-78878248 | Msa0046610:intron | 50.0% | |
| ! | AGTTTGGGATGAACCGGTAC+CGG | - | chr1_1:78878534-78878553 | None:intergenic | 50.0% |
| ! | GGCTTCAGTTTGGGATGAAC+CGG | - | chr1_1:78878540-78878559 | None:intergenic | 50.0% |
| AGTTCGCATACAGGACGGTT+AGG | - | chr1_1:78878604-78878623 | None:intergenic | 50.0% | |
| CTGCAGAGCGTGGGAAAAAA+AGG | - | chr1_1:78879042-78879061 | None:intergenic | 50.0% | |
| GGGTAAACTTACGCTGGTGA+AGG | + | chr1_1:78879451-78879470 | Msa0046610:CDS | 50.0% | |
| TAGCGATGAAGACAGCGAAG+AGG | + | chr1_1:78879715-78879734 | Msa0046610:CDS | 50.0% | |
| !! | TGGAATGGGTGAGGTTGATG+TGG | + | chr1_1:78879748-78879767 | Msa0046610:CDS | 50.0% |
| !! | GGTGAGGTTGATGTGGAGAA+TGG | + | chr1_1:78879755-78879774 | Msa0046610:CDS | 50.0% |
| ! | GGAGTCATCGTCGTGTCGTT+AGG | - | chr1_1:78876687-78876706 | None:intergenic | 55.0% |
| ! | AAGGTACCCGGAGGTAGACA+CGG | + | chr1_1:78876734-78876753 | Msa0046610:CDS | 55.0% |
| AGACACGGCGGTGATGATAC+AGG | + | chr1_1:78876749-78876768 | Msa0046610:CDS | 55.0% | |
| GGTCAAGAACATCGCCGACA+TGG | + | chr1_1:78876770-78876789 | Msa0046610:CDS | 55.0% | |
| AATCCGACGGCGAGAAAGCT+CGG | - | chr1_1:78876850-78876869 | None:intergenic | 55.0% | |
| ! | CAAGGTTGGTCGAACCGAAC+CGG | + | chr1_1:78876890-78876909 | Msa0046610:CDS | 55.0% |
| GCGCCATGTTGCTGAAACCT+TGG | + | chr1_1:78877037-78877056 | Msa0046610:CDS | 55.0% | |
| AGACACAGCAGGTACGACCT+TGG | - | chr1_1:78877872-78877891 | None:intergenic | 55.0% | |
| TTTGCAGGAGGCAATGCGGA+AGG | + | chr1_1:78878135-78878154 | Msa0046610:intron | 55.0% | |
| !! | GTACGAGGAAAGGTACCCGG+AGG | + | chr1_1:78876725-78876744 | Msa0046610:CDS | 60.0% |
| ATCACCGCCGTGTCTACCTC+CGG | - | chr1_1:78876744-78876763 | None:intergenic | 60.0% | |
| TCTCCGAGCTTTCTCGCCGT+CGG | + | chr1_1:78876844-78876863 | Msa0046610:CDS | 60.0% | |
| TGGTCGAACCGAACCGGTGA+TGG | + | chr1_1:78876896-78876915 | Msa0046610:CDS | 60.0% | |
| GTACCCGGAGGTAGACACGG+CGG | + | chr1_1:78876737-78876756 | Msa0046610:CDS | 65.0% | |
| TCACCGCCGTGTCTACCTCC+GGG | - | chr1_1:78876743-78876762 | None:intergenic | 65.0% | |
| ATGCGGAAGGCTGAAGCCGC+TGG | + | chr1_1:78878148-78878167 | Msa0046610:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 78876548 | 78879981 | 78876548 | ID=Msa0046610;Name=Msa0046610 |
| chr1_1 | mRNA | 78876548 | 78879981 | 78876548 | ID=Msa0046610-mRNA-1;Parent=Msa0046610;Name=Msa0046610-mRNA-1;_AED=0.37;_eAED=0.37;_QI=151|0.5|0.6|1|1|1|5|185|298 |
| chr1_1 | exon | 78876548 | 78877073 | 78876548 | ID=Msa0046610-mRNA-1:exon:27135;Parent=Msa0046610-mRNA-1 |
| chr1_1 | exon | 78877841 | 78878011 | 78877841 | ID=Msa0046610-mRNA-1:exon:27136;Parent=Msa0046610-mRNA-1 |
| chr1_1 | exon | 78878142 | 78878246 | 78878142 | ID=Msa0046610-mRNA-1:exon:27137;Parent=Msa0046610-mRNA-1 |
| chr1_1 | exon | 78879386 | 78879484 | 78879386 | ID=Msa0046610-mRNA-1:exon:27138;Parent=Msa0046610-mRNA-1 |
| chr1_1 | exon | 78879650 | 78879981 | 78879650 | ID=Msa0046610-mRNA-1:exon:27139;Parent=Msa0046610-mRNA-1 |
| chr1_1 | five_prime_UTR | 78876548 | 78876698 | 78876548 | ID=Msa0046610-mRNA-1:five_prime_utr;Parent=Msa0046610-mRNA-1 |
| chr1_1 | CDS | 78876699 | 78877073 | 78876699 | ID=Msa0046610-mRNA-1:cds;Parent=Msa0046610-mRNA-1 |
| chr1_1 | CDS | 78877841 | 78878011 | 78877841 | ID=Msa0046610-mRNA-1:cds;Parent=Msa0046610-mRNA-1 |
| chr1_1 | CDS | 78878142 | 78878246 | 78878142 | ID=Msa0046610-mRNA-1:cds;Parent=Msa0046610-mRNA-1 |
| chr1_1 | CDS | 78879386 | 78879484 | 78879386 | ID=Msa0046610-mRNA-1:cds;Parent=Msa0046610-mRNA-1 |
| chr1_1 | CDS | 78879650 | 78879796 | 78879650 | ID=Msa0046610-mRNA-1:cds;Parent=Msa0046610-mRNA-1 |
| chr1_1 | three_prime_UTR | 78879797 | 78879981 | 78879797 | ID=Msa0046610-mRNA-1:three_prime_utr;Parent=Msa0046610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
