Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1124010 | AES81817.2 | 67.568 | 444 | 61 | 7 | 37 | 398 | 3 | 445 | 0.0 | 551 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1124010 | sp|Q05D44|IF2P_MOUSE | 42.731 | 227 | 112 | 4 | 187 | 398 | 953 | 1176 | 2.25e-43 | 166 |
Msa1124010 | sp|Q05D44|IF2P_MOUSE | 35.366 | 164 | 70 | 7 | 50 | 179 | 626 | 787 | 3.23e-16 | 84.7 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1124010 | G7L1S6 | 67.568 | 444 | 61 | 7 | 37 | 398 | 3 | 445 | 0.0 | 551 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0046610 | Msa1124010 | 0.820692 | 5.996999e-53 | -8.615850e-47 |
Msa0101820 | Msa1124010 | -0.823357 | 1.447123e-53 | -8.615850e-47 |
Msa0615130 | Msa1124010 | 0.855872 | 4.713292e-62 | -8.615850e-47 |
Msa0680100 | Msa1124010 | 0.801232 | 9.920694e-49 | -8.615850e-47 |
Msa0730610 | Msa1124010 | 0.832089 | 1.153611e-55 | -8.615850e-47 |
Msa0792290 | Msa1124010 | 0.840761 | 7.156750e-58 | -8.615850e-47 |
Msa0473270 | Msa1124010 | 0.806301 | 8.792922e-50 | -8.615850e-47 |
Msa1069220 | Msa1124010 | 0.813481 | 2.505042e-51 | -8.615850e-47 |
Msa1077320 | Msa1124010 | 0.836358 | 9.805372e-57 | -8.615850e-47 |
Msa1079100 | Msa1124010 | 0.907436 | 5.079402e-81 | -8.615850e-47 |
Msa1116990 | Msa1124010 | 0.831707 | 1.433375e-55 | -8.615850e-47 |
Msa1124010 | Msa1169290 | 0.816335 | 5.831810e-52 | -8.615850e-47 |
Msa1124010 | Msa1173470 | 0.837074 | 6.442514e-57 | -8.615850e-47 |
Msa1124010 | Msa1177130 | 0.803380 | 3.583371e-49 | -8.615850e-47 |
Msa1124010 | Msa1177160 | 0.836887 | 7.190253e-57 | -8.615850e-47 |
Msa1124010 | Msa1316930 | 0.809889 | 1.513449e-50 | -8.615850e-47 |
Msa0542480 | Msa1124010 | 0.813940 | 1.984816e-51 | -8.615850e-47 |
Msa0968290 | Msa1124010 | 0.834673 | 2.616094e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1124010 | MtrunA17_Chr1g0202021 | 59.410 | 271 | 69 | 4 | 188 | 417 | 1067 | 1337 | 1.27e-88 | 293 |
Msa1124010 | MtrunA17_Chr1g0202021 | 45.294 | 170 | 59 | 6 | 44 | 181 | 744 | 911 | 1.46e-31 | 127 |
Msa1124010 | MtrunA17_Chr4g0004141 | 63.673 | 245 | 39 | 4 | 180 | 400 | 212 | 430 | 1.51e-88 | 275 |
Msa1124010 | MtrunA17_Chr4g0004141 | 75.676 | 148 | 28 | 3 | 37 | 181 | 3 | 145 | 1.05e-70 | 229 |
Msa1124010 | MtrunA17_Chr1g0201991 | 62.025 | 237 | 66 | 3 | 188 | 400 | 552 | 788 | 1.56e-84 | 275 |
Msa1124010 | MtrunA17_Chr1g0201991 | 45.652 | 184 | 61 | 9 | 35 | 181 | 215 | 396 | 1.12e-30 | 124 |
Msa1124010 | MtrunA17_Chr7g0263861 | 83.871 | 124 | 20 | 0 | 215 | 338 | 139 | 262 | 4.31e-68 | 217 |
Msa1124010 | MtrunA17_Chr7g0263861 | 84.906 | 53 | 5 | 3 | 20 | 72 | 38 | 87 | 3.57e-19 | 87.0 |
Msa1124010 | MtrunA17_Chr4g0000221 | 45.810 | 179 | 74 | 7 | 22 | 181 | 8 | 182 | 3.43e-32 | 127 |
Msa1124010 | MtrunA17_Chr4g0000991 | 42.373 | 177 | 89 | 6 | 16 | 181 | 27 | 201 | 7.50e-30 | 119 |
Msa1124010 | MtrunA17_Chr7g0264901 | 39.130 | 161 | 66 | 7 | 50 | 181 | 36 | 193 | 4.56e-21 | 94.4 |
Msa1124010 | MtrunA17_Chr7g0264471 | 41.290 | 155 | 67 | 8 | 50 | 181 | 55 | 208 | 7.32e-19 | 87.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1124010 | AT1G76810.1 | 52.768 | 271 | 86 | 5 | 188 | 417 | 1021 | 1290 | 3.87e-70 | 240 |
Msa1124010 | AT1G76810.1 | 39.362 | 188 | 76 | 7 | 28 | 179 | 678 | 863 | 5.85e-27 | 114 |
Msa1124010 | AT1G21160.1 | 48.148 | 243 | 95 | 7 | 188 | 400 | 813 | 1054 | 1.72e-55 | 198 |
Msa1124010 | AT1G21160.1 | 39.157 | 166 | 67 | 6 | 48 | 181 | 494 | 657 | 1.07e-23 | 104 |
Msa1124010 | AT1G76720.1 | 49.160 | 238 | 85 | 6 | 188 | 400 | 944 | 1170 | 4.87e-53 | 191 |
Msa1124010 | AT1G76720.1 | 40.491 | 163 | 63 | 6 | 50 | 180 | 627 | 787 | 9.57e-25 | 107 |
Msa1124010 | AT1G76720.2 | 49.160 | 238 | 85 | 6 | 188 | 400 | 977 | 1203 | 6.52e-53 | 191 |
Msa1124010 | AT1G76720.2 | 40.491 | 163 | 63 | 6 | 50 | 180 | 660 | 820 | 1.13e-24 | 107 |
Msa1124010 | AT2G27700.2 | 49.606 | 127 | 55 | 1 | 188 | 305 | 353 | 479 | 1.71e-29 | 120 |
Msa1124010 | AT2G27700.2 | 36.216 | 185 | 74 | 9 | 29 | 181 | 23 | 195 | 3.49e-20 | 92.8 |
Msa1124010 | AT2G27700.1 | 49.606 | 127 | 55 | 1 | 188 | 305 | 352 | 478 | 1.76e-29 | 120 |
Msa1124010 | AT2G27700.1 | 36.216 | 185 | 74 | 9 | 29 | 181 | 23 | 195 | 3.67e-20 | 92.8 |
Find 104 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGCTTTATCAACCGGTTTA+AGG | 0.103803 | 7_3:+75044540 | None:intergenic |
TCTATGTGATATTGCTATTT+TGG | 0.172010 | 7_3:-75045889 | Msa1124010:CDS |
TTATTGTTGAAGACAAAATT+TGG | 0.225479 | 7_3:+75045025 | None:intergenic |
TTGGCAACTTGCACACAAAT+TGG | 0.226218 | 7_3:-75045173 | Msa1124010:CDS |
TTTAATAGATTGAGTGAGTC+TGG | 0.258728 | 7_3:+75045834 | None:intergenic |
TCTTCTTCTTCGATGCGATT+AGG | 0.267102 | 7_3:+75046230 | None:intergenic |
CTTTCATACCAAGGTCTCTA+AGG | 0.302491 | 7_3:-75045688 | Msa1124010:intron |
CTTCTTCTTCGATGCGATTA+GGG | 0.311832 | 7_3:+75046231 | None:intergenic |
CGCCGCCGCCGCCTAGTTAT+CGG | 0.311977 | 7_3:-75046082 | Msa1124010:CDS |
AGCATTGATGCAGCAGTCTA+AGG | 0.316795 | 7_3:-75045724 | Msa1124010:CDS |
TCGTGTTGAGGATGGAATAT+AGG | 0.318215 | 7_3:+75045977 | None:intergenic |
TCACAAAAGAACATTGATAT+TGG | 0.325612 | 7_3:-75044587 | Msa1124010:CDS |
GAGGAACGGCAGAAAATGTT+TGG | 0.326899 | 7_3:-75044137 | Msa1124010:CDS |
ATTCATAGTTGCCTTGAATA+AGG | 0.327102 | 7_3:-75045796 | Msa1124010:CDS |
AGGGCAGCAAGTAGTCATTA+AGG | 0.347605 | 7_3:-75044513 | Msa1124010:intron |
CCTTTCTCCGCTTTATCAAC+CGG | 0.361422 | 7_3:+75044533 | None:intergenic |
TCACCTATGATGCAGGAAAC+AGG | 0.371395 | 7_3:+75046056 | None:intergenic |
ATGGAAGTTGGTGAAGAAAT+TGG | 0.380089 | 7_3:-75043941 | Msa1124010:CDS |
TTGTTGATAACCCACCAATC+AGG | 0.381453 | 7_3:-75045920 | Msa1124010:CDS |
TGCATGTAACTTTCACTCAT+TGG | 0.386009 | 7_3:-75045362 | Msa1124010:CDS |
CGGTTTAAGGTTATTCTCAA+TGG | 0.393167 | 7_3:+75044553 | None:intergenic |
GGTCAAGCCTAATGATGATT+TGG | 0.403142 | 7_3:-75045440 | Msa1124010:CDS |
ACTGGCAAAACCATGCTTAT+CGG | 0.408275 | 7_3:-75046026 | Msa1124010:CDS |
CCTATGTTTACAGCACTAAC+AGG | 0.412018 | 7_3:+75045298 | None:intergenic |
AACCCTGTTTCCTGCATCAT+AGG | 0.414622 | 7_3:-75046059 | Msa1124010:CDS |
CGTGTTGAGGATGGAATATA+GGG | 0.417813 | 7_3:+75045978 | None:intergenic |
GATCGGACCCTTCTTGTGTT+TGG | 0.424209 | 7_3:+75046267 | None:intergenic |
CAACTTGGTTTGCAGATTGT+TGG | 0.426486 | 7_3:-75044170 | Msa1124010:intron |
GCTTTACGAAATGGAGCATT+GGG | 0.433943 | 7_3:+75045744 | None:intergenic |
TGCATCAATGCTTTACGAAA+TGG | 0.450689 | 7_3:+75045735 | None:intergenic |
TCCACATCCTTCTTATGTAC+AGG | 0.452205 | 7_3:+75045274 | None:intergenic |
GTGATATGATTGAGGATGAA+TGG | 0.454429 | 7_3:-75043960 | Msa1124010:CDS |
TGGCAACTTGCACACAAATT+GGG | 0.455869 | 7_3:-75045172 | Msa1124010:CDS |
GGCAACTATGAATTGTTTGT+TGG | 0.464340 | 7_3:+75045806 | None:intergenic |
CATTGAGAATAACCTTAAAC+CGG | 0.464349 | 7_3:-75044552 | Msa1124010:CDS |
CGATAACTAGGCGGCGGCGG+CGG | 0.464451 | 7_3:+75046083 | None:intergenic |
TTGGAGTCCAAATCATCATT+AGG | 0.466611 | 7_3:+75045433 | None:intergenic |
GATAATTGAATTGAATGTTA+TGG | 0.471610 | 7_3:+75046291 | None:intergenic |
GAAACAGGGTTCCGATAACT+AGG | 0.472644 | 7_3:+75046071 | None:intergenic |
ATGCTTATCGGTTGTATTCG+AGG | 0.472797 | 7_3:-75046014 | Msa1124010:CDS |
GCTTCAGAGGTGACCATGAC+AGG | 0.474789 | 7_3:+75045196 | None:intergenic |
GACTTACATGAAAAGACTTA+AGG | 0.477581 | 7_3:-75045098 | Msa1124010:CDS |
TTCCGATAACTAGGCGGCGG+CGG | 0.478651 | 7_3:+75046080 | None:intergenic |
TGCTTTACGAAATGGAGCAT+TGG | 0.484108 | 7_3:+75045743 | None:intergenic |
CATAGGTCCTGTACATAAGA+AGG | 0.490399 | 7_3:-75045281 | Msa1124010:CDS |
AAGAAGAAGATGAATGAAGA+AGG | 0.490750 | 7_3:-75046214 | Msa1124010:intron |
TGTGTTTGCGTTTCCTGTCA+TGG | 0.492509 | 7_3:-75045209 | Msa1124010:CDS |
CCGGTTGATAAAGCGGAGAA+AGG | 0.494425 | 7_3:-75044533 | Msa1124010:CDS |
GTTGACATTATGAATGATGA+TGG | 0.494806 | 7_3:-75045864 | Msa1124010:CDS |
AATCATGTCGACCTTATTCA+AGG | 0.495710 | 7_3:+75045785 | None:intergenic |
AGGAACGGCAGAAAATGTTT+GGG | 0.497795 | 7_3:-75044136 | Msa1124010:CDS |
CATAGATGTAAACCCCTGAT+TGG | 0.497927 | 7_3:+75045906 | None:intergenic |
TGTTGATAACCCACCAATCA+GGG | 0.498373 | 7_3:-75045919 | Msa1124010:CDS |
AACTATGAATTGTTTGTTGG+TGG | 0.503706 | 7_3:+75045809 | None:intergenic |
TGGCATGATCTTGAGAATGC+AGG | 0.505991 | 7_3:+75045045 | None:intergenic |
ACTCCAAGTCAAACTTGAGC+AGG | 0.515644 | 7_3:-75045417 | Msa1124010:CDS |
AATCCTGCTCAAGTTTGACT+TGG | 0.516550 | 7_3:+75045414 | None:intergenic |
GCATTGATGCAGCAGTCTAA+GGG | 0.516752 | 7_3:-75045723 | Msa1124010:CDS |
AATTATCACCAAACACAAGA+AGG | 0.519504 | 7_3:-75046275 | Msa1124010:CDS |
GGTCTTTCAGCATCACCAGC+AGG | 0.524228 | 7_3:+75045951 | None:intergenic |
TCCTCAACACGATTTCCTGC+TGG | 0.524341 | 7_3:-75045966 | Msa1124010:CDS |
TTAATAGATTGAGTGAGTCT+GGG | 0.528397 | 7_3:+75045835 | None:intergenic |
TCATGGTCACCTCTGAAGCT+TGG | 0.529642 | 7_3:-75045192 | Msa1124010:CDS |
GATGTAAACCCCTGATTGGT+GGG | 0.534620 | 7_3:+75045910 | None:intergenic |
CCTGTTAGTGCTGTAAACAT+AGG | 0.535265 | 7_3:-75045298 | Msa1124010:CDS |
TGATGCTGAAAGACCTATGC+TGG | 0.541381 | 7_3:-75045943 | Msa1124010:CDS |
CGGTTGATAAAGCGGAGAAA+GGG | 0.545541 | 7_3:-75044532 | Msa1124010:CDS |
TCCTGTACATAAGAAGGATG+TGG | 0.551184 | 7_3:-75045275 | Msa1124010:CDS |
GTACGCATCACCTATGATGC+AGG | 0.551576 | 7_3:+75046049 | None:intergenic |
GCAGGAAATCGTGTTGAGGA+TGG | 0.556787 | 7_3:+75045969 | None:intergenic |
AGAAACAACCTTAGAGACCT+TGG | 0.558351 | 7_3:+75045680 | None:intergenic |
AAAGAAAGATTCTGCTGATG+AGG | 0.561211 | 7_3:-75045068 | Msa1124010:CDS |
GATTGAGGATGAATGGAAGT+TGG | 0.562484 | 7_3:-75043953 | Msa1124010:CDS |
AGGTCGACATGATTCATGAC+TGG | 0.563144 | 7_3:-75045776 | Msa1124010:CDS |
CCTTAAACCGGTTGATAAAG+CGG | 0.563826 | 7_3:-75044540 | Msa1124010:CDS |
AGATGTAAACCCCTGATTGG+TGG | 0.566011 | 7_3:+75045909 | None:intergenic |
GATTGTTGGCAGCAATTCTG+AGG | 0.566245 | 7_3:-75044156 | Msa1124010:CDS |
TTTAAGGTTATTCTCAATGG+AGG | 0.578938 | 7_3:+75044556 | None:intergenic |
CACCTATGATGCAGGAAACA+GGG | 0.584535 | 7_3:+75046057 | None:intergenic |
ACATAAGAAGGATGTGGAGA+AGG | 0.587750 | 7_3:-75045269 | Msa1124010:CDS |
TTGGCAGCAATTCTGAGGAA+CGG | 0.593050 | 7_3:-75044151 | Msa1124010:CDS |
AGGATTGACACGACTCCTGA+GGG | 0.593387 | 7_3:-75045397 | Msa1124010:CDS |
GGGTTATCAACAACCAGCAT+AGG | 0.595374 | 7_3:+75045930 | None:intergenic |
TCATTAGGCTTGACCACAGG+TGG | 0.596499 | 7_3:+75045448 | None:intergenic |
GAGATTTATTCGTCCACCTG+TGG | 0.603555 | 7_3:-75045461 | Msa1124010:CDS |
TGCAAGTTGCCAAGCTTCAG+AGG | 0.608001 | 7_3:+75045183 | None:intergenic |
GCAAACACAACAGCATACTC+TGG | 0.609863 | 7_3:+75045223 | None:intergenic |
ATCATAGGTGATGCGTACAC+TGG | 0.610292 | 7_3:-75046044 | Msa1124010:CDS |
GATCTAGGGTGATATGATTG+AGG | 0.613649 | 7_3:-75043968 | Msa1124010:intron |
GGGTTCCGATAACTAGGCGG+CGG | 0.620140 | 7_3:+75046077 | None:intergenic |
TCATCATTAGGCTTGACCAC+AGG | 0.622043 | 7_3:+75045445 | None:intergenic |
ATTATCACCAAACACAAGAA+GGG | 0.624373 | 7_3:-75046274 | Msa1124010:CDS |
CAGGATTGACACGACTCCTG+AGG | 0.624798 | 7_3:-75045398 | Msa1124010:CDS |
ACCAGCAGGAAATCGTGTTG+AGG | 0.632195 | 7_3:+75045965 | None:intergenic |
TTACATGAAAAGACTTAAGG+AGG | 0.633295 | 7_3:-75045095 | Msa1124010:CDS |
AACGGCAGAAAATGTTTGGG+AGG | 0.637423 | 7_3:-75044133 | Msa1124010:CDS |
GTTGATAACCCACCAATCAG+GGG | 0.646530 | 7_3:-75045918 | Msa1124010:CDS |
TCAAGATGACTTTCATACCA+AGG | 0.654036 | 7_3:-75045697 | Msa1124010:CDS |
GATTGACACGACTCCTGAGG+GGG | 0.654054 | 7_3:-75045395 | Msa1124010:CDS |
TCGAATACAACCGATAAGCA+TGG | 0.657228 | 7_3:+75046016 | None:intergenic |
CTAACAGGAATATTGACTTG+TGG | 0.661965 | 7_3:+75045313 | None:intergenic |
TATTCTCAATGGAGGCAATG+CGG | 0.721051 | 7_3:+75044564 | None:intergenic |
GGATTGACACGACTCCTGAG+GGG | 0.733825 | 7_3:-75045396 | Msa1124010:CDS |
ACAGGGTTCCGATAACTAGG+CGG | 0.768874 | 7_3:+75046074 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTGATTATGATTATTATTA+TGG | - | chr7_3:75044077-75044096 | Msa1124010:intron | 10.0% |
!! | ATTGATTATGATTATTATTA+TGG | - | chr7_3:75044077-75044096 | Msa1124010:intron | 10.0% |
!! | TATAAAAACAACAAAACTAT+TGG | - | chr7_3:75044615-75044634 | Msa1124010:intron | 15.0% |
!!! | AATTAGCAATTCTATATTTT+CGG | - | chr7_3:75045409-75045428 | Msa1124010:CDS | 15.0% |
!! | AATGTGTATTTAACTATTTA+TGG | - | chr7_3:75046200-75046219 | Msa1124010:intron | 15.0% |
!! | TATTTAACTATTTATGGATT+TGG | - | chr7_3:75046206-75046225 | Msa1124010:intron | 15.0% |
!! | TATAAAAACAACAAAACTAT+TGG | - | chr7_3:75044615-75044634 | Msa1124010:intron | 15.0% |
!!! | AATTAGCAATTCTATATTTT+CGG | - | chr7_3:75045409-75045428 | Msa1124010:CDS | 15.0% |
!! | AATGTGTATTTAACTATTTA+TGG | - | chr7_3:75046200-75046219 | Msa1124010:intron | 15.0% |
!! | TATTTAACTATTTATGGATT+TGG | - | chr7_3:75046206-75046225 | Msa1124010:intron | 15.0% |
!! | GATAATTGAATTGAATGTTA+TGG | + | chr7_3:75043946-75043965 | None:intergenic | 20.0% |
!! | AACAATAGAAATAACATATC+CGG | + | chr7_3:75044696-75044715 | None:intergenic | 20.0% |
!!! | TGTTATTTCTATTGTTTAAG+TGG | - | chr7_3:75044700-75044719 | Msa1124010:intron | 20.0% |
!!! | AAATAGATGATGCATTTTAA+CGG | + | chr7_3:75045105-75045124 | None:intergenic | 20.0% |
!! | TTATTGTTGAAGACAAAATT+TGG | + | chr7_3:75045212-75045231 | None:intergenic | 20.0% |
!!! | AAATTTTGTCTTCAACAATA+AGG | - | chr7_3:75045211-75045230 | Msa1124010:CDS | 20.0% |
!!! | ATTAGCAATTCTATATTTTC+GGG | - | chr7_3:75045410-75045429 | Msa1124010:CDS | 20.0% |
!!! | ACTAGTTTATGATAAAACAA+CGG | + | chr7_3:75045912-75045931 | None:intergenic | 20.0% |
!! | TTTATTATTAATGACTTACC+CGG | + | chr7_3:75046164-75046183 | None:intergenic | 20.0% |
!!! | ACAATATAACTTTTAAGAGA+CGG | + | chr7_3:75046237-75046256 | None:intergenic | 20.0% |
!! | TATTGTTGAATTATTGATCT+AGG | - | chr7_3:75046251-75046270 | Msa1124010:CDS | 20.0% |
!! | ATTGTTGAATTATTGATCTA+GGG | - | chr7_3:75046252-75046271 | Msa1124010:CDS | 20.0% |
!! | GATAATTGAATTGAATGTTA+TGG | + | chr7_3:75043946-75043965 | None:intergenic | 20.0% |
!! | AACAATAGAAATAACATATC+CGG | + | chr7_3:75044696-75044715 | None:intergenic | 20.0% |
!!! | TGTTATTTCTATTGTTTAAG+TGG | - | chr7_3:75044700-75044719 | Msa1124010:intron | 20.0% |
!!! | AAATAGATGATGCATTTTAA+CGG | + | chr7_3:75045105-75045124 | None:intergenic | 20.0% |
!! | TTATTGTTGAAGACAAAATT+TGG | + | chr7_3:75045212-75045231 | None:intergenic | 20.0% |
!!! | AAATTTTGTCTTCAACAATA+AGG | - | chr7_3:75045211-75045230 | Msa1124010:CDS | 20.0% |
!!! | ATTAGCAATTCTATATTTTC+GGG | - | chr7_3:75045410-75045429 | Msa1124010:CDS | 20.0% |
!!! | ACTAGTTTATGATAAAACAA+CGG | + | chr7_3:75045912-75045931 | None:intergenic | 20.0% |
!! | TTTATTATTAATGACTTACC+CGG | + | chr7_3:75046164-75046183 | None:intergenic | 20.0% |
!!! | ACAATATAACTTTTAAGAGA+CGG | + | chr7_3:75046237-75046256 | None:intergenic | 20.0% |
!! | TATTGTTGAATTATTGATCT+AGG | - | chr7_3:75046251-75046270 | Msa1124010:CDS | 20.0% |
!! | ATTGTTGAATTATTGATCTA+GGG | - | chr7_3:75046252-75046271 | Msa1124010:CDS | 20.0% |
!!! | TCTATGTGATATTGCTATTT+TGG | - | chr7_3:75044345-75044364 | Msa1124010:intron | 25.0% |
! | ACAATAGAAATAACATATCC+GGG | + | chr7_3:75044695-75044714 | None:intergenic | 25.0% |
! | AATTGTGAATAATGGTGTAT+TGG | + | chr7_3:75044728-75044747 | None:intergenic | 25.0% |
! | GTAGGTAAAATTGTGAATAA+TGG | + | chr7_3:75044736-75044755 | None:intergenic | 25.0% |
!!! | CATAACATTTTTTCTCATTG+TGG | - | chr7_3:75045293-75045312 | Msa1124010:CDS | 25.0% |
!! | TTTTGTGAAGGAATACAAAT+TGG | + | chr7_3:75045635-75045654 | None:intergenic | 25.0% |
!! | ATATCAATGTTCTTTTGTGA+AGG | + | chr7_3:75045647-75045666 | None:intergenic | 25.0% |
! | TCACAAAAGAACATTGATAT+TGG | - | chr7_3:75045647-75045666 | Msa1124010:intron | 25.0% |
! | ACAAAATTATTCCCCAATAA+AGG | - | chr7_3:75045786-75045805 | Msa1124010:CDS | 25.0% |
! | CAAAATTATTCCCCAATAAA+GGG | - | chr7_3:75045787-75045806 | Msa1124010:CDS | 25.0% |
! | TATCTCAAATTCCCTTTATT+GGG | + | chr7_3:75045801-75045820 | None:intergenic | 25.0% |
! | ATATCTCAAATTCCCTTTAT+TGG | + | chr7_3:75045802-75045821 | None:intergenic | 25.0% |
!! | AATAAAGGGAATTTGAGATA+TGG | - | chr7_3:75045801-75045820 | Msa1124010:CDS | 25.0% |
!!! | TTTTTCAACATCACAATCAT+AGG | + | chr7_3:75045846-75045865 | None:intergenic | 25.0% |
!! | AACTATTTATGGATTTGGTT+TGG | - | chr7_3:75046211-75046230 | Msa1124010:intron | 25.0% |
!!! | TCTATGTGATATTGCTATTT+TGG | - | chr7_3:75044345-75044364 | Msa1124010:intron | 25.0% |
! | ACAATAGAAATAACATATCC+GGG | + | chr7_3:75044695-75044714 | None:intergenic | 25.0% |
! | AATTGTGAATAATGGTGTAT+TGG | + | chr7_3:75044728-75044747 | None:intergenic | 25.0% |
! | GTAGGTAAAATTGTGAATAA+TGG | + | chr7_3:75044736-75044755 | None:intergenic | 25.0% |
!!! | CATAACATTTTTTCTCATTG+TGG | - | chr7_3:75045293-75045312 | Msa1124010:CDS | 25.0% |
!! | TTTTGTGAAGGAATACAAAT+TGG | + | chr7_3:75045635-75045654 | None:intergenic | 25.0% |
!! | ATATCAATGTTCTTTTGTGA+AGG | + | chr7_3:75045647-75045666 | None:intergenic | 25.0% |
! | TCACAAAAGAACATTGATAT+TGG | - | chr7_3:75045647-75045666 | Msa1124010:intron | 25.0% |
! | ACAAAATTATTCCCCAATAA+AGG | - | chr7_3:75045786-75045805 | Msa1124010:CDS | 25.0% |
! | CAAAATTATTCCCCAATAAA+GGG | - | chr7_3:75045787-75045806 | Msa1124010:CDS | 25.0% |
! | TATCTCAAATTCCCTTTATT+GGG | + | chr7_3:75045801-75045820 | None:intergenic | 25.0% |
! | ATATCTCAAATTCCCTTTAT+TGG | + | chr7_3:75045802-75045821 | None:intergenic | 25.0% |
!! | AATAAAGGGAATTTGAGATA+TGG | - | chr7_3:75045801-75045820 | Msa1124010:CDS | 25.0% |
!!! | TTTTTCAACATCACAATCAT+AGG | + | chr7_3:75045846-75045865 | None:intergenic | 25.0% |
!! | AACTATTTATGGATTTGGTT+TGG | - | chr7_3:75046211-75046230 | Msa1124010:intron | 25.0% |
AATTATCACCAAACACAAGA+AGG | - | chr7_3:75043959-75043978 | Msa1124010:CDS | 30.0% | |
ATTATCACCAAACACAAGAA+GGG | - | chr7_3:75043960-75043979 | Msa1124010:CDS | 30.0% | |
! | AGGGTTTCTTTTCTTTTGAT+CGG | + | chr7_3:75043987-75044006 | None:intergenic | 30.0% |
AAGAAGAAGATGAATGAAGA+AGG | - | chr7_3:75044020-75044039 | Msa1124010:intron | 30.0% | |
GTTGACATTATGAATGATGA+TGG | - | chr7_3:75044370-75044389 | Msa1124010:intron | 30.0% | |
TTAATAGATTGAGTGAGTCT+GGG | + | chr7_3:75044402-75044421 | None:intergenic | 30.0% | |
TTTAATAGATTGAGTGAGTC+TGG | + | chr7_3:75044403-75044422 | None:intergenic | 30.0% | |
! | AACTATGAATTGTTTGTTGG+TGG | + | chr7_3:75044428-75044447 | None:intergenic | 30.0% |
ATTCATAGTTGCCTTGAATA+AGG | - | chr7_3:75044438-75044457 | Msa1124010:intron | 30.0% | |
AACAACAAAACTATTGGAGT+TGG | - | chr7_3:75044621-75044640 | Msa1124010:intron | 30.0% | |
GACTTACATGAAAAGACTTA+AGG | - | chr7_3:75045136-75045155 | Msa1124010:CDS | 30.0% | |
TTACATGAAAAGACTTAAGG+AGG | - | chr7_3:75045139-75045158 | Msa1124010:CDS | 30.0% | |
ACATCTACTCACAAAACAAT+GGG | + | chr7_3:75045239-75045258 | None:intergenic | 30.0% | |
! | TTGTTTTCTCTGCATTAGAT+TGG | - | chr7_3:75045337-75045356 | Msa1124010:CDS | 30.0% |
! | TGTTTTCTCTGCATTAGATT+GGG | - | chr7_3:75045338-75045357 | Msa1124010:CDS | 30.0% |
ACACAAAGCATAAAACAGAA+TGG | + | chr7_3:75045478-75045497 | None:intergenic | 30.0% | |
! | TGCAATGCACAAAATTTGTT+TGG | - | chr7_3:75045563-75045582 | Msa1124010:intron | 30.0% |
! | TTTAAGGTTATTCTCAATGG+AGG | + | chr7_3:75045681-75045700 | None:intergenic | 30.0% |
CATTGAGAATAACCTTAAAC+CGG | - | chr7_3:75045682-75045701 | Msa1124010:intron | 30.0% | |
ATCTCAAATTCCCTTTATTG+GGG | + | chr7_3:75045800-75045819 | None:intergenic | 30.0% | |
CGGCTACAAATAACTTAAAA+CGG | + | chr7_3:75045892-75045911 | None:intergenic | 30.0% | |
TCTTAATGTTCTGTTCAACT+TGG | - | chr7_3:75046049-75046068 | Msa1124010:CDS | 30.0% | |
AATTATCACCAAACACAAGA+AGG | - | chr7_3:75043959-75043978 | Msa1124010:CDS | 30.0% | |
ATTATCACCAAACACAAGAA+GGG | - | chr7_3:75043960-75043979 | Msa1124010:CDS | 30.0% | |
! | AGGGTTTCTTTTCTTTTGAT+CGG | + | chr7_3:75043987-75044006 | None:intergenic | 30.0% |
AAGAAGAAGATGAATGAAGA+AGG | - | chr7_3:75044020-75044039 | Msa1124010:intron | 30.0% | |
GTTGACATTATGAATGATGA+TGG | - | chr7_3:75044370-75044389 | Msa1124010:intron | 30.0% | |
TTAATAGATTGAGTGAGTCT+GGG | + | chr7_3:75044402-75044421 | None:intergenic | 30.0% | |
TTTAATAGATTGAGTGAGTC+TGG | + | chr7_3:75044403-75044422 | None:intergenic | 30.0% | |
! | AACTATGAATTGTTTGTTGG+TGG | + | chr7_3:75044428-75044447 | None:intergenic | 30.0% |
ATTCATAGTTGCCTTGAATA+AGG | - | chr7_3:75044438-75044457 | Msa1124010:intron | 30.0% | |
AACAACAAAACTATTGGAGT+TGG | - | chr7_3:75044621-75044640 | Msa1124010:intron | 30.0% | |
GACTTACATGAAAAGACTTA+AGG | - | chr7_3:75045136-75045155 | Msa1124010:CDS | 30.0% | |
TTACATGAAAAGACTTAAGG+AGG | - | chr7_3:75045139-75045158 | Msa1124010:CDS | 30.0% | |
ACATCTACTCACAAAACAAT+GGG | + | chr7_3:75045239-75045258 | None:intergenic | 30.0% | |
! | TTGTTTTCTCTGCATTAGAT+TGG | - | chr7_3:75045337-75045356 | Msa1124010:CDS | 30.0% |
! | TGTTTTCTCTGCATTAGATT+GGG | - | chr7_3:75045338-75045357 | Msa1124010:CDS | 30.0% |
ACACAAAGCATAAAACAGAA+TGG | + | chr7_3:75045478-75045497 | None:intergenic | 30.0% | |
! | TGCAATGCACAAAATTTGTT+TGG | - | chr7_3:75045563-75045582 | Msa1124010:intron | 30.0% |
! | TTTAAGGTTATTCTCAATGG+AGG | + | chr7_3:75045681-75045700 | None:intergenic | 30.0% |
CATTGAGAATAACCTTAAAC+CGG | - | chr7_3:75045682-75045701 | Msa1124010:intron | 30.0% | |
ATCTCAAATTCCCTTTATTG+GGG | + | chr7_3:75045800-75045819 | None:intergenic | 30.0% | |
CGGCTACAAATAACTTAAAA+CGG | + | chr7_3:75045892-75045911 | None:intergenic | 30.0% | |
TCTTAATGTTCTGTTCAACT+TGG | - | chr7_3:75046049-75046068 | Msa1124010:CDS | 30.0% | |
! | TGCTTTGAATGTTTCTTTCC+AGG | - | chr7_3:75044115-75044134 | Msa1124010:CDS | 35.0% |
GGCAACTATGAATTGTTTGT+TGG | + | chr7_3:75044431-75044450 | None:intergenic | 35.0% | |
AATCATGTCGACCTTATTCA+AGG | + | chr7_3:75044452-75044471 | None:intergenic | 35.0% | |
TGCATCAATGCTTTACGAAA+TGG | + | chr7_3:75044502-75044521 | None:intergenic | 35.0% | |
TCAAGATGACTTTCATACCA+AGG | - | chr7_3:75044537-75044556 | Msa1124010:CDS | 35.0% | |
TTGGAGTCCAAATCATCATT+AGG | + | chr7_3:75044804-75044823 | None:intergenic | 35.0% | |
TGCATGTAACTTTCACTCAT+TGG | - | chr7_3:75044872-75044891 | Msa1124010:intron | 35.0% | |
!! | CTAACAGGAATATTGACTTG+TGG | + | chr7_3:75044924-75044943 | None:intergenic | 35.0% |
AAAGAAAGATTCTGCTGATG+AGG | - | chr7_3:75045166-75045185 | Msa1124010:CDS | 35.0% | |
GACATCTACTCACAAAACAA+TGG | + | chr7_3:75045240-75045259 | None:intergenic | 35.0% | |
ATACCTTCAAAATGCCTTGA+AGG | + | chr7_3:75045262-75045281 | None:intergenic | 35.0% | |
! | GTTTTCTCTGCATTAGATTG+GGG | - | chr7_3:75045339-75045358 | Msa1124010:CDS | 35.0% |
!! | AATTCTATATTTTCGGGCCT+TGG | - | chr7_3:75045416-75045435 | Msa1124010:CDS | 35.0% |
!! | ATTCTATATTTTCGGGCCTT+GGG | - | chr7_3:75045417-75045436 | Msa1124010:CDS | 35.0% |
TGTGTTCTTATGTATCAGAC+TGG | - | chr7_3:75045493-75045512 | Msa1124010:intron | 35.0% | |
ATATTGTCTGCTTGACAGAT+TGG | - | chr7_3:75045605-75045624 | Msa1124010:intron | 35.0% | |
! | CGGTTTAAGGTTATTCTCAA+TGG | + | chr7_3:75045684-75045703 | None:intergenic | 35.0% |
TTTGTGAGTTCAGAGAAGTT+TGG | + | chr7_3:75045771-75045790 | None:intergenic | 35.0% | |
CATCACAATCATAGGCATAA+AGG | + | chr7_3:75045838-75045857 | None:intergenic | 35.0% | |
CACGTGTAAATCAGTGAAAT+TGG | + | chr7_3:75045966-75045985 | None:intergenic | 35.0% | |
AGAGAAATAAAACTGTGCAG+AGG | - | chr7_3:75046014-75046033 | Msa1124010:CDS | 35.0% | |
!!! | AAATGTTTGGGAGGCATTTT+TGG | - | chr7_3:75046110-75046129 | Msa1124010:intron | 35.0% |
TAATGACTTACCCGGTATTA+TGG | + | chr7_3:75046156-75046175 | None:intergenic | 35.0% | |
GTGATATGATTGAGGATGAA+TGG | - | chr7_3:75046274-75046293 | Msa1124010:CDS | 35.0% | |
!! | ATGGAAGTTGGTGAAGAAAT+TGG | - | chr7_3:75046293-75046312 | Msa1124010:CDS | 35.0% |
! | TGCTTTGAATGTTTCTTTCC+AGG | - | chr7_3:75044115-75044134 | Msa1124010:CDS | 35.0% |
GGCAACTATGAATTGTTTGT+TGG | + | chr7_3:75044431-75044450 | None:intergenic | 35.0% | |
AATCATGTCGACCTTATTCA+AGG | + | chr7_3:75044452-75044471 | None:intergenic | 35.0% | |
TGCATCAATGCTTTACGAAA+TGG | + | chr7_3:75044502-75044521 | None:intergenic | 35.0% | |
TCAAGATGACTTTCATACCA+AGG | - | chr7_3:75044537-75044556 | Msa1124010:CDS | 35.0% | |
TTGGAGTCCAAATCATCATT+AGG | + | chr7_3:75044804-75044823 | None:intergenic | 35.0% | |
TGCATGTAACTTTCACTCAT+TGG | - | chr7_3:75044872-75044891 | Msa1124010:intron | 35.0% | |
!! | CTAACAGGAATATTGACTTG+TGG | + | chr7_3:75044924-75044943 | None:intergenic | 35.0% |
AAAGAAAGATTCTGCTGATG+AGG | - | chr7_3:75045166-75045185 | Msa1124010:CDS | 35.0% | |
GACATCTACTCACAAAACAA+TGG | + | chr7_3:75045240-75045259 | None:intergenic | 35.0% | |
ATACCTTCAAAATGCCTTGA+AGG | + | chr7_3:75045262-75045281 | None:intergenic | 35.0% | |
! | GTTTTCTCTGCATTAGATTG+GGG | - | chr7_3:75045339-75045358 | Msa1124010:CDS | 35.0% |
!! | AATTCTATATTTTCGGGCCT+TGG | - | chr7_3:75045416-75045435 | Msa1124010:CDS | 35.0% |
!! | ATTCTATATTTTCGGGCCTT+GGG | - | chr7_3:75045417-75045436 | Msa1124010:CDS | 35.0% |
TGTGTTCTTATGTATCAGAC+TGG | - | chr7_3:75045493-75045512 | Msa1124010:intron | 35.0% | |
ATATTGTCTGCTTGACAGAT+TGG | - | chr7_3:75045605-75045624 | Msa1124010:intron | 35.0% | |
! | CGGTTTAAGGTTATTCTCAA+TGG | + | chr7_3:75045684-75045703 | None:intergenic | 35.0% |
TTTGTGAGTTCAGAGAAGTT+TGG | + | chr7_3:75045771-75045790 | None:intergenic | 35.0% | |
CATCACAATCATAGGCATAA+AGG | + | chr7_3:75045838-75045857 | None:intergenic | 35.0% | |
CACGTGTAAATCAGTGAAAT+TGG | + | chr7_3:75045966-75045985 | None:intergenic | 35.0% | |
AGAGAAATAAAACTGTGCAG+AGG | - | chr7_3:75046014-75046033 | Msa1124010:CDS | 35.0% | |
!!! | AAATGTTTGGGAGGCATTTT+TGG | - | chr7_3:75046110-75046129 | Msa1124010:intron | 35.0% |
TAATGACTTACCCGGTATTA+TGG | + | chr7_3:75046156-75046175 | None:intergenic | 35.0% | |
GTGATATGATTGAGGATGAA+TGG | - | chr7_3:75046274-75046293 | Msa1124010:CDS | 35.0% | |
!! | ATGGAAGTTGGTGAAGAAAT+TGG | - | chr7_3:75046293-75046312 | Msa1124010:CDS | 35.0% |
CTTCTTCTTCGATGCGATTA+GGG | + | chr7_3:75044006-75044025 | None:intergenic | 40.0% | |
TCTTCTTCTTCGATGCGATT+AGG | + | chr7_3:75044007-75044026 | None:intergenic | 40.0% | |
ACTGGCAAAACCATGCTTAT+CGG | - | chr7_3:75044208-75044227 | Msa1124010:intron | 40.0% | |
TCGAATACAACCGATAAGCA+TGG | + | chr7_3:75044221-75044240 | None:intergenic | 40.0% | |
! | ATGCTTATCGGTTGTATTCG+AGG | - | chr7_3:75044220-75044239 | Msa1124010:intron | 40.0% |
CGTGTTGAGGATGGAATATA+GGG | + | chr7_3:75044259-75044278 | None:intergenic | 40.0% | |
TCGTGTTGAGGATGGAATAT+AGG | + | chr7_3:75044260-75044279 | None:intergenic | 40.0% | |
!! | TTGTTGATAACCCACCAATC+AGG | - | chr7_3:75044314-75044333 | Msa1124010:intron | 40.0% |
!! | TGTTGATAACCCACCAATCA+GGG | - | chr7_3:75044315-75044334 | Msa1124010:intron | 40.0% |
CATAGATGTAAACCCCTGAT+TGG | + | chr7_3:75044331-75044350 | None:intergenic | 40.0% | |
! | GCTTTACGAAATGGAGCATT+GGG | + | chr7_3:75044493-75044512 | None:intergenic | 40.0% |
TGCTTTACGAAATGGAGCAT+TGG | + | chr7_3:75044494-75044513 | None:intergenic | 40.0% | |
CTTTCATACCAAGGTCTCTA+AGG | - | chr7_3:75044546-75044565 | Msa1124010:CDS | 40.0% | |
AGAAACAACCTTAGAGACCT+TGG | + | chr7_3:75044557-75044576 | None:intergenic | 40.0% | |
TTCTCAGTTCAAGACACACA+CGG | - | chr7_3:75044573-75044592 | Msa1124010:CDS | 40.0% | |
TCACCACTTATTGCACTTGT+GGG | + | chr7_3:75044666-75044685 | None:intergenic | 40.0% | |
TTCACCACTTATTGCACTTG+TGG | + | chr7_3:75044667-75044686 | None:intergenic | 40.0% | |
ACAAGTGCAATAAGTGGTGA+AGG | - | chr7_3:75044666-75044685 | Msa1124010:intron | 40.0% | |
AATAAGTGGTGAAGGAATCC+CGG | - | chr7_3:75044674-75044693 | Msa1124010:intron | 40.0% | |
GGTCAAGCCTAATGATGATT+TGG | - | chr7_3:75044794-75044813 | Msa1124010:intron | 40.0% | |
AATCCTGCTCAAGTTTGACT+TGG | + | chr7_3:75044823-75044842 | None:intergenic | 40.0% | |
CCTATGTTTACAGCACTAAC+AGG | + | chr7_3:75044939-75044958 | None:intergenic | 40.0% | |
CCTGTTAGTGCTGTAAACAT+AGG | - | chr7_3:75044936-75044955 | Msa1124010:intron | 40.0% | |
CATAGGTCCTGTACATAAGA+AGG | - | chr7_3:75044953-75044972 | Msa1124010:intron | 40.0% | |
TCCTGTACATAAGAAGGATG+TGG | - | chr7_3:75044959-75044978 | Msa1124010:intron | 40.0% | |
TCCACATCCTTCTTATGTAC+AGG | + | chr7_3:75044963-75044982 | None:intergenic | 40.0% | |
ACATAAGAAGGATGTGGAGA+AGG | - | chr7_3:75044965-75044984 | Msa1124010:intron | 40.0% | |
TTGGCAACTTGCACACAAAT+TGG | - | chr7_3:75045061-75045080 | Msa1124010:CDS | 40.0% | |
TGGCAACTTGCACACAAATT+GGG | - | chr7_3:75045062-75045081 | Msa1124010:CDS | 40.0% | |
TTGTGAGTAGATGTCCTTCA+AGG | - | chr7_3:75045245-75045264 | Msa1124010:CDS | 40.0% | |
!! | TGTCCTTCAAGGCATTTTGA+AGG | - | chr7_3:75045256-75045275 | Msa1124010:CDS | 40.0% |
! | GTTGCATCTGTATTTGAGAC+AGG | - | chr7_3:75045386-75045405 | Msa1124010:CDS | 40.0% |
TAGGTTAGGTTAACAGTAGG+AGG | + | chr7_3:75045452-75045471 | None:intergenic | 40.0% | |
TCCTACTGTTAACCTAACCT+AGG | - | chr7_3:75045451-75045470 | Msa1124010:CDS | 40.0% | |
ACCTAGGTTAGGTTAACAGT+AGG | + | chr7_3:75045455-75045474 | None:intergenic | 40.0% | |
AAACAGAATGGACCTAGGTT+AGG | + | chr7_3:75045466-75045485 | None:intergenic | 40.0% | |
GCATAAAACAGAATGGACCT+AGG | + | chr7_3:75045471-75045490 | None:intergenic | 40.0% | |
ACCAAAACAGACATCCAAGA+CGG | + | chr7_3:75045520-75045539 | None:intergenic | 40.0% | |
!!! | TGTCTGTTTTGGTCGTAATG+AGG | - | chr7_3:75045527-75045546 | Msa1124010:intron | 40.0% |
!!! | GTCTGTTTTGGTCGTAATGA+GGG | - | chr7_3:75045528-75045547 | Msa1124010:intron | 40.0% |
TATTCTCAATGGAGGCAATG+CGG | + | chr7_3:75045673-75045692 | None:intergenic | 40.0% | |
!! | CCTTAAACCGGTTGATAAAG+CGG | - | chr7_3:75045694-75045713 | Msa1124010:CDS | 40.0% |
ACGTGCTCGATATTTAGAAG+TGG | - | chr7_3:75045981-75046000 | Msa1124010:CDS | 40.0% | |
!! | CAACTTGGTTTGCAGATTGT+TGG | - | chr7_3:75046064-75046083 | Msa1124010:CDS | 40.0% |
AGGAACGGCAGAAAATGTTT+GGG | - | chr7_3:75046098-75046117 | Msa1124010:CDS | 40.0% | |
GAGCTTGTAAGCCATAATAC+CGG | - | chr7_3:75046142-75046161 | Msa1124010:intron | 40.0% | |
AGCTTGTAAGCCATAATACC+GGG | - | chr7_3:75046143-75046162 | Msa1124010:intron | 40.0% | |
! | GATCTAGGGTGATATGATTG+AGG | - | chr7_3:75046266-75046285 | Msa1124010:CDS | 40.0% |
GATTGAGGATGAATGGAAGT+TGG | - | chr7_3:75046281-75046300 | Msa1124010:CDS | 40.0% | |
CTTCTTCTTCGATGCGATTA+GGG | + | chr7_3:75044006-75044025 | None:intergenic | 40.0% | |
TCTTCTTCTTCGATGCGATT+AGG | + | chr7_3:75044007-75044026 | None:intergenic | 40.0% | |
ACTGGCAAAACCATGCTTAT+CGG | - | chr7_3:75044208-75044227 | Msa1124010:intron | 40.0% | |
TCGAATACAACCGATAAGCA+TGG | + | chr7_3:75044221-75044240 | None:intergenic | 40.0% | |
! | ATGCTTATCGGTTGTATTCG+AGG | - | chr7_3:75044220-75044239 | Msa1124010:intron | 40.0% |
CGTGTTGAGGATGGAATATA+GGG | + | chr7_3:75044259-75044278 | None:intergenic | 40.0% | |
TCGTGTTGAGGATGGAATAT+AGG | + | chr7_3:75044260-75044279 | None:intergenic | 40.0% | |
!! | TTGTTGATAACCCACCAATC+AGG | - | chr7_3:75044314-75044333 | Msa1124010:intron | 40.0% |
!! | TGTTGATAACCCACCAATCA+GGG | - | chr7_3:75044315-75044334 | Msa1124010:intron | 40.0% |
CATAGATGTAAACCCCTGAT+TGG | + | chr7_3:75044331-75044350 | None:intergenic | 40.0% | |
! | GCTTTACGAAATGGAGCATT+GGG | + | chr7_3:75044493-75044512 | None:intergenic | 40.0% |
TGCTTTACGAAATGGAGCAT+TGG | + | chr7_3:75044494-75044513 | None:intergenic | 40.0% | |
CTTTCATACCAAGGTCTCTA+AGG | - | chr7_3:75044546-75044565 | Msa1124010:CDS | 40.0% | |
AGAAACAACCTTAGAGACCT+TGG | + | chr7_3:75044557-75044576 | None:intergenic | 40.0% | |
TTCTCAGTTCAAGACACACA+CGG | - | chr7_3:75044573-75044592 | Msa1124010:CDS | 40.0% | |
TCACCACTTATTGCACTTGT+GGG | + | chr7_3:75044666-75044685 | None:intergenic | 40.0% | |
TTCACCACTTATTGCACTTG+TGG | + | chr7_3:75044667-75044686 | None:intergenic | 40.0% | |
ACAAGTGCAATAAGTGGTGA+AGG | - | chr7_3:75044666-75044685 | Msa1124010:intron | 40.0% | |
AATAAGTGGTGAAGGAATCC+CGG | - | chr7_3:75044674-75044693 | Msa1124010:intron | 40.0% | |
GGTCAAGCCTAATGATGATT+TGG | - | chr7_3:75044794-75044813 | Msa1124010:intron | 40.0% | |
AATCCTGCTCAAGTTTGACT+TGG | + | chr7_3:75044823-75044842 | None:intergenic | 40.0% | |
CCTATGTTTACAGCACTAAC+AGG | + | chr7_3:75044939-75044958 | None:intergenic | 40.0% | |
CCTGTTAGTGCTGTAAACAT+AGG | - | chr7_3:75044936-75044955 | Msa1124010:intron | 40.0% | |
CATAGGTCCTGTACATAAGA+AGG | - | chr7_3:75044953-75044972 | Msa1124010:intron | 40.0% | |
TCCTGTACATAAGAAGGATG+TGG | - | chr7_3:75044959-75044978 | Msa1124010:intron | 40.0% | |
TCCACATCCTTCTTATGTAC+AGG | + | chr7_3:75044963-75044982 | None:intergenic | 40.0% | |
ACATAAGAAGGATGTGGAGA+AGG | - | chr7_3:75044965-75044984 | Msa1124010:intron | 40.0% | |
TTGGCAACTTGCACACAAAT+TGG | - | chr7_3:75045061-75045080 | Msa1124010:CDS | 40.0% | |
TGGCAACTTGCACACAAATT+GGG | - | chr7_3:75045062-75045081 | Msa1124010:CDS | 40.0% | |
TTGTGAGTAGATGTCCTTCA+AGG | - | chr7_3:75045245-75045264 | Msa1124010:CDS | 40.0% | |
!! | TGTCCTTCAAGGCATTTTGA+AGG | - | chr7_3:75045256-75045275 | Msa1124010:CDS | 40.0% |
! | GTTGCATCTGTATTTGAGAC+AGG | - | chr7_3:75045386-75045405 | Msa1124010:CDS | 40.0% |
TAGGTTAGGTTAACAGTAGG+AGG | + | chr7_3:75045452-75045471 | None:intergenic | 40.0% | |
TCCTACTGTTAACCTAACCT+AGG | - | chr7_3:75045451-75045470 | Msa1124010:CDS | 40.0% | |
ACCTAGGTTAGGTTAACAGT+AGG | + | chr7_3:75045455-75045474 | None:intergenic | 40.0% | |
AAACAGAATGGACCTAGGTT+AGG | + | chr7_3:75045466-75045485 | None:intergenic | 40.0% | |
GCATAAAACAGAATGGACCT+AGG | + | chr7_3:75045471-75045490 | None:intergenic | 40.0% | |
ACCAAAACAGACATCCAAGA+CGG | + | chr7_3:75045520-75045539 | None:intergenic | 40.0% | |
!!! | TGTCTGTTTTGGTCGTAATG+AGG | - | chr7_3:75045527-75045546 | Msa1124010:intron | 40.0% |
!!! | GTCTGTTTTGGTCGTAATGA+GGG | - | chr7_3:75045528-75045547 | Msa1124010:intron | 40.0% |
TATTCTCAATGGAGGCAATG+CGG | + | chr7_3:75045673-75045692 | None:intergenic | 40.0% | |
!! | CCTTAAACCGGTTGATAAAG+CGG | - | chr7_3:75045694-75045713 | Msa1124010:CDS | 40.0% |
ACGTGCTCGATATTTAGAAG+TGG | - | chr7_3:75045981-75046000 | Msa1124010:CDS | 40.0% | |
!! | CAACTTGGTTTGCAGATTGT+TGG | - | chr7_3:75046064-75046083 | Msa1124010:CDS | 40.0% |
AGGAACGGCAGAAAATGTTT+GGG | - | chr7_3:75046098-75046117 | Msa1124010:CDS | 40.0% | |
GAGCTTGTAAGCCATAATAC+CGG | - | chr7_3:75046142-75046161 | Msa1124010:intron | 40.0% | |
AGCTTGTAAGCCATAATACC+GGG | - | chr7_3:75046143-75046162 | Msa1124010:intron | 40.0% | |
! | GATCTAGGGTGATATGATTG+AGG | - | chr7_3:75046266-75046285 | Msa1124010:CDS | 40.0% |
GATTGAGGATGAATGGAAGT+TGG | - | chr7_3:75046281-75046300 | Msa1124010:CDS | 40.0% | |
GAAACAGGGTTCCGATAACT+AGG | + | chr7_3:75044166-75044185 | None:intergenic | 45.0% | |
AACCCTGTTTCCTGCATCAT+AGG | - | chr7_3:75044175-75044194 | Msa1124010:intron | 45.0% | |
CACCTATGATGCAGGAAACA+GGG | + | chr7_3:75044180-75044199 | None:intergenic | 45.0% | |
TCACCTATGATGCAGGAAAC+AGG | + | chr7_3:75044181-75044200 | None:intergenic | 45.0% | |
ATCATAGGTGATGCGTACAC+TGG | - | chr7_3:75044190-75044209 | Msa1124010:intron | 45.0% | |
TGATGCTGAAAGACCTATGC+TGG | - | chr7_3:75044291-75044310 | Msa1124010:intron | 45.0% | |
GGGTTATCAACAACCAGCAT+AGG | + | chr7_3:75044307-75044326 | None:intergenic | 45.0% | |
!! | GTTGATAACCCACCAATCAG+GGG | - | chr7_3:75044316-75044335 | Msa1124010:intron | 45.0% |
GATGTAAACCCCTGATTGGT+GGG | + | chr7_3:75044327-75044346 | None:intergenic | 45.0% | |
AGATGTAAACCCCTGATTGG+TGG | + | chr7_3:75044328-75044347 | None:intergenic | 45.0% | |
AGGTCGACATGATTCATGAC+TGG | - | chr7_3:75044458-75044477 | Msa1124010:intron | 45.0% | |
!! | AGCATTGATGCAGCAGTCTA+AGG | - | chr7_3:75044510-75044529 | Msa1124010:intron | 45.0% |
! | GCATTGATGCAGCAGTCTAA+GGG | - | chr7_3:75044511-75044530 | Msa1124010:intron | 45.0% |
TCTCAGTTCAAGACACACAC+GGG | - | chr7_3:75044574-75044593 | Msa1124010:CDS | 45.0% | |
GAGATTTATTCGTCCACCTG+TGG | - | chr7_3:75044773-75044792 | Msa1124010:intron | 45.0% | |
TCATCATTAGGCTTGACCAC+AGG | + | chr7_3:75044792-75044811 | None:intergenic | 45.0% | |
ACTCCAAGTCAAACTTGAGC+AGG | - | chr7_3:75044817-75044836 | Msa1124010:intron | 45.0% | |
GCAAACACAACAGCATACTC+TGG | + | chr7_3:75045014-75045033 | None:intergenic | 45.0% | |
TGTGTTTGCGTTTCCTGTCA+TGG | - | chr7_3:75045025-75045044 | Msa1124010:CDS | 45.0% | |
TGGCATGATCTTGAGAATGC+AGG | + | chr7_3:75045192-75045211 | None:intergenic | 45.0% | |
TAGGAGGATAAACGTACCCA+AGG | + | chr7_3:75045436-75045455 | None:intergenic | 45.0% | |
! | TCCGTCTTGGATGTCTGTTT+TGG | - | chr7_3:75045516-75045535 | Msa1124010:intron | 45.0% |
! | CCGCTTTATCAACCGGTTTA+AGG | + | chr7_3:75045697-75045716 | None:intergenic | 45.0% |
CCTTTCTCCGCTTTATCAAC+CGG | + | chr7_3:75045704-75045723 | None:intergenic | 45.0% | |
!! | CGGTTGATAAAGCGGAGAAA+GGG | - | chr7_3:75045702-75045721 | Msa1124010:CDS | 45.0% |
AGGGCAGCAAGTAGTCATTA+AGG | - | chr7_3:75045721-75045740 | Msa1124010:CDS | 45.0% | |
GATTGTTGGCAGCAATTCTG+AGG | - | chr7_3:75046078-75046097 | Msa1124010:CDS | 45.0% | |
! | TTGGCAGCAATTCTGAGGAA+CGG | - | chr7_3:75046083-75046102 | Msa1124010:CDS | 45.0% |
GAGGAACGGCAGAAAATGTT+TGG | - | chr7_3:75046097-75046116 | Msa1124010:CDS | 45.0% | |
AACGGCAGAAAATGTTTGGG+AGG | - | chr7_3:75046101-75046120 | Msa1124010:intron | 45.0% | |
GAAACAGGGTTCCGATAACT+AGG | + | chr7_3:75044166-75044185 | None:intergenic | 45.0% | |
AACCCTGTTTCCTGCATCAT+AGG | - | chr7_3:75044175-75044194 | Msa1124010:intron | 45.0% | |
CACCTATGATGCAGGAAACA+GGG | + | chr7_3:75044180-75044199 | None:intergenic | 45.0% | |
TCACCTATGATGCAGGAAAC+AGG | + | chr7_3:75044181-75044200 | None:intergenic | 45.0% | |
ATCATAGGTGATGCGTACAC+TGG | - | chr7_3:75044190-75044209 | Msa1124010:intron | 45.0% | |
TGATGCTGAAAGACCTATGC+TGG | - | chr7_3:75044291-75044310 | Msa1124010:intron | 45.0% | |
GGGTTATCAACAACCAGCAT+AGG | + | chr7_3:75044307-75044326 | None:intergenic | 45.0% | |
!! | GTTGATAACCCACCAATCAG+GGG | - | chr7_3:75044316-75044335 | Msa1124010:intron | 45.0% |
GATGTAAACCCCTGATTGGT+GGG | + | chr7_3:75044327-75044346 | None:intergenic | 45.0% | |
AGATGTAAACCCCTGATTGG+TGG | + | chr7_3:75044328-75044347 | None:intergenic | 45.0% | |
AGGTCGACATGATTCATGAC+TGG | - | chr7_3:75044458-75044477 | Msa1124010:intron | 45.0% | |
!! | AGCATTGATGCAGCAGTCTA+AGG | - | chr7_3:75044510-75044529 | Msa1124010:intron | 45.0% |
! | GCATTGATGCAGCAGTCTAA+GGG | - | chr7_3:75044511-75044530 | Msa1124010:intron | 45.0% |
TCTCAGTTCAAGACACACAC+GGG | - | chr7_3:75044574-75044593 | Msa1124010:CDS | 45.0% | |
GAGATTTATTCGTCCACCTG+TGG | - | chr7_3:75044773-75044792 | Msa1124010:intron | 45.0% | |
TCATCATTAGGCTTGACCAC+AGG | + | chr7_3:75044792-75044811 | None:intergenic | 45.0% | |
ACTCCAAGTCAAACTTGAGC+AGG | - | chr7_3:75044817-75044836 | Msa1124010:intron | 45.0% | |
GCAAACACAACAGCATACTC+TGG | + | chr7_3:75045014-75045033 | None:intergenic | 45.0% | |
TGTGTTTGCGTTTCCTGTCA+TGG | - | chr7_3:75045025-75045044 | Msa1124010:CDS | 45.0% | |
TGGCATGATCTTGAGAATGC+AGG | + | chr7_3:75045192-75045211 | None:intergenic | 45.0% | |
TAGGAGGATAAACGTACCCA+AGG | + | chr7_3:75045436-75045455 | None:intergenic | 45.0% | |
! | TCCGTCTTGGATGTCTGTTT+TGG | - | chr7_3:75045516-75045535 | Msa1124010:intron | 45.0% |
! | CCGCTTTATCAACCGGTTTA+AGG | + | chr7_3:75045697-75045716 | None:intergenic | 45.0% |
CCTTTCTCCGCTTTATCAAC+CGG | + | chr7_3:75045704-75045723 | None:intergenic | 45.0% | |
!! | CGGTTGATAAAGCGGAGAAA+GGG | - | chr7_3:75045702-75045721 | Msa1124010:CDS | 45.0% |
AGGGCAGCAAGTAGTCATTA+AGG | - | chr7_3:75045721-75045740 | Msa1124010:CDS | 45.0% | |
GATTGTTGGCAGCAATTCTG+AGG | - | chr7_3:75046078-75046097 | Msa1124010:CDS | 45.0% | |
! | TTGGCAGCAATTCTGAGGAA+CGG | - | chr7_3:75046083-75046102 | Msa1124010:CDS | 45.0% |
GAGGAACGGCAGAAAATGTT+TGG | - | chr7_3:75046097-75046116 | Msa1124010:CDS | 45.0% | |
AACGGCAGAAAATGTTTGGG+AGG | - | chr7_3:75046101-75046120 | Msa1124010:intron | 45.0% | |
GATCGGACCCTTCTTGTGTT+TGG | + | chr7_3:75043970-75043989 | None:intergenic | 50.0% | |
ACAGGGTTCCGATAACTAGG+CGG | + | chr7_3:75044163-75044182 | None:intergenic | 50.0% | |
GTACGCATCACCTATGATGC+AGG | + | chr7_3:75044188-75044207 | None:intergenic | 50.0% | |
GCAGGAAATCGTGTTGAGGA+TGG | + | chr7_3:75044268-75044287 | None:intergenic | 50.0% | |
TCCTCAACACGATTTCCTGC+TGG | - | chr7_3:75044268-75044287 | Msa1124010:intron | 50.0% | |
ACCAGCAGGAAATCGTGTTG+AGG | + | chr7_3:75044272-75044291 | None:intergenic | 50.0% | |
GTGCCCACAAGTGCAATAAG+TGG | - | chr7_3:75044660-75044679 | Msa1124010:intron | 50.0% | |
!! | CTGCACAGCTTGTTGACTGT+AGG | + | chr7_3:75044754-75044773 | None:intergenic | 50.0% |
TCATTAGGCTTGACCACAGG+TGG | + | chr7_3:75044789-75044808 | None:intergenic | 50.0% | |
AGGATTGACACGACTCCTGA+GGG | - | chr7_3:75044837-75044856 | Msa1124010:intron | 50.0% | |
!! | TCATGGTCACCTCTGAAGCT+TGG | - | chr7_3:75045042-75045061 | Msa1124010:CDS | 50.0% |
TGCAAGTTGCCAAGCTTCAG+AGG | + | chr7_3:75045054-75045073 | None:intergenic | 50.0% | |
! | TGTATCAGACTGGTCCGTCT+TGG | - | chr7_3:75045503-75045522 | Msa1124010:intron | 50.0% |
!! | CCGGTTGATAAAGCGGAGAA+AGG | - | chr7_3:75045701-75045720 | Msa1124010:CDS | 50.0% |
GATCGGACCCTTCTTGTGTT+TGG | + | chr7_3:75043970-75043989 | None:intergenic | 50.0% | |
ACAGGGTTCCGATAACTAGG+CGG | + | chr7_3:75044163-75044182 | None:intergenic | 50.0% | |
GTACGCATCACCTATGATGC+AGG | + | chr7_3:75044188-75044207 | None:intergenic | 50.0% | |
GCAGGAAATCGTGTTGAGGA+TGG | + | chr7_3:75044268-75044287 | None:intergenic | 50.0% | |
TCCTCAACACGATTTCCTGC+TGG | - | chr7_3:75044268-75044287 | Msa1124010:intron | 50.0% | |
ACCAGCAGGAAATCGTGTTG+AGG | + | chr7_3:75044272-75044291 | None:intergenic | 50.0% | |
GTGCCCACAAGTGCAATAAG+TGG | - | chr7_3:75044660-75044679 | Msa1124010:intron | 50.0% | |
!! | CTGCACAGCTTGTTGACTGT+AGG | + | chr7_3:75044754-75044773 | None:intergenic | 50.0% |
TCATTAGGCTTGACCACAGG+TGG | + | chr7_3:75044789-75044808 | None:intergenic | 50.0% | |
AGGATTGACACGACTCCTGA+GGG | - | chr7_3:75044837-75044856 | Msa1124010:intron | 50.0% | |
!! | TCATGGTCACCTCTGAAGCT+TGG | - | chr7_3:75045042-75045061 | Msa1124010:CDS | 50.0% |
TGCAAGTTGCCAAGCTTCAG+AGG | + | chr7_3:75045054-75045073 | None:intergenic | 50.0% | |
! | TGTATCAGACTGGTCCGTCT+TGG | - | chr7_3:75045503-75045522 | Msa1124010:intron | 50.0% |
!! | CCGGTTGATAAAGCGGAGAA+AGG | - | chr7_3:75045701-75045720 | Msa1124010:CDS | 50.0% |
GGCGGCTTAACAGTATCACC+TGG | + | chr7_3:75044136-75044155 | None:intergenic | 55.0% | |
GGTCTTTCAGCATCACCAGC+AGG | + | chr7_3:75044286-75044305 | None:intergenic | 55.0% | |
CAGGATTGACACGACTCCTG+AGG | - | chr7_3:75044836-75044855 | Msa1124010:intron | 55.0% | |
GGATTGACACGACTCCTGAG+GGG | - | chr7_3:75044838-75044857 | Msa1124010:intron | 55.0% | |
GATTGACACGACTCCTGAGG+GGG | - | chr7_3:75044839-75044858 | Msa1124010:intron | 55.0% | |
! | GCATTGACACAAACCCCCTC+AGG | + | chr7_3:75044855-75044874 | None:intergenic | 55.0% |
GCTTCAGAGGTGACCATGAC+AGG | + | chr7_3:75045041-75045060 | None:intergenic | 55.0% | |
GGCGGCTTAACAGTATCACC+TGG | + | chr7_3:75044136-75044155 | None:intergenic | 55.0% | |
GGTCTTTCAGCATCACCAGC+AGG | + | chr7_3:75044286-75044305 | None:intergenic | 55.0% | |
CAGGATTGACACGACTCCTG+AGG | - | chr7_3:75044836-75044855 | Msa1124010:intron | 55.0% | |
GGATTGACACGACTCCTGAG+GGG | - | chr7_3:75044838-75044857 | Msa1124010:intron | 55.0% | |
GATTGACACGACTCCTGAGG+GGG | - | chr7_3:75044839-75044858 | Msa1124010:intron | 55.0% | |
! | GCATTGACACAAACCCCCTC+AGG | + | chr7_3:75044855-75044874 | None:intergenic | 55.0% |
GCTTCAGAGGTGACCATGAC+AGG | + | chr7_3:75045041-75045060 | None:intergenic | 55.0% | |
TTCCGATAACTAGGCGGCGG+CGG | + | chr7_3:75044157-75044176 | None:intergenic | 60.0% | |
GGGTTCCGATAACTAGGCGG+CGG | + | chr7_3:75044160-75044179 | None:intergenic | 60.0% | |
TTCCGATAACTAGGCGGCGG+CGG | + | chr7_3:75044157-75044176 | None:intergenic | 60.0% | |
GGGTTCCGATAACTAGGCGG+CGG | + | chr7_3:75044160-75044179 | None:intergenic | 60.0% | |
CGATAACTAGGCGGCGGCGG+CGG | + | chr7_3:75044154-75044173 | None:intergenic | 70.0% | |
CGCCGCCGCCGCCTAGTTAT+CGG | - | chr7_3:75044152-75044171 | Msa1124010:CDS | 70.0% | |
CGATAACTAGGCGGCGGCGG+CGG | + | chr7_3:75044154-75044173 | None:intergenic | 70.0% | |
CGCCGCCGCCGCCTAGTTAT+CGG | - | chr7_3:75044152-75044171 | Msa1124010:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 75043930 | 75046326 | 75043930 | ID=Msa1124010;Name=Msa1124010 |
chr7_3 | mRNA | 75043930 | 75046326 | 75043930 | ID=Msa1124010-mRNA-1;Parent=Msa1124010;Name=Msa1124010-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.4|0.16|0.83|1|0.83|6|0|418 |
chr7_3 | exon | 75046215 | 75046326 | 75046215 | ID=Msa1124010-mRNA-1:exon:20147;Parent=Msa1124010-mRNA-1 |
chr7_3 | exon | 75045689 | 75046119 | 75045689 | ID=Msa1124010-mRNA-1:exon:20146;Parent=Msa1124010-mRNA-1 |
chr7_3 | exon | 75045015 | 75045482 | 75045015 | ID=Msa1124010-mRNA-1:exon:20145;Parent=Msa1124010-mRNA-1 |
chr7_3 | exon | 75044514 | 75044633 | 75044514 | ID=Msa1124010-mRNA-1:exon:20144;Parent=Msa1124010-mRNA-1 |
chr7_3 | exon | 75044109 | 75044177 | 75044109 | ID=Msa1124010-mRNA-1:exon:20143;Parent=Msa1124010-mRNA-1 |
chr7_3 | exon | 75043930 | 75043983 | 75043930 | ID=Msa1124010-mRNA-1:exon:20142;Parent=Msa1124010-mRNA-1 |
chr7_3 | CDS | 75046215 | 75046326 | 75046215 | ID=Msa1124010-mRNA-1:cds;Parent=Msa1124010-mRNA-1 |
chr7_3 | CDS | 75045689 | 75046119 | 75045689 | ID=Msa1124010-mRNA-1:cds;Parent=Msa1124010-mRNA-1 |
chr7_3 | CDS | 75045015 | 75045482 | 75045015 | ID=Msa1124010-mRNA-1:cds;Parent=Msa1124010-mRNA-1 |
chr7_3 | CDS | 75044514 | 75044633 | 75044514 | ID=Msa1124010-mRNA-1:cds;Parent=Msa1124010-mRNA-1 |
chr7_3 | CDS | 75044109 | 75044177 | 75044109 | ID=Msa1124010-mRNA-1:cds;Parent=Msa1124010-mRNA-1 |
chr7_3 | CDS | 75043930 | 75043983 | 75043930 | ID=Msa1124010-mRNA-1:cds;Parent=Msa1124010-mRNA-1 |
Gene Sequence |
Protein sequence |