Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046850 | XP_003626428.1 | 85.109 | 779 | 49 | 5 | 1 | 774 | 1 | 717 | 0.0 | 1299 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046850 | sp|Q9FGY9|PNG1_ARATH | 54.289 | 781 | 282 | 9 | 1 | 770 | 1 | 717 | 0.0 | 773 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046850 | G7L1U8 | 85.109 | 779 | 49 | 5 | 1 | 774 | 1 | 717 | 0.0 | 1299 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0046850 | Msa1179940 | 0.800395 | 1.470591e-48 | -8.615850e-47 |
| Msa0046850 | Msa1179970 | 0.800057 | 1.722538e-48 | -8.615850e-47 |
| Msa0046850 | Msa1188710 | 0.805262 | 1.453533e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046850 | MtrunA17_Chr7g0274011 | 85.109 | 779 | 49 | 5 | 1 | 774 | 1 | 717 | 0.0 | 1299 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046850 | AT5G49570.1 | 54.289 | 781 | 282 | 9 | 1 | 770 | 1 | 717 | 0.0 | 773 |
Find 183 sgRNAs with CRISPR-Local
Find 521 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTCCATCGGATCCCTTTC+TGG | 0.114764 | 1_1:+79273186 | None:intergenic |
| CTTCCTTCTGAGACTCTTTA+TGG | 0.121538 | 1_1:-79276563 | Msa0046850:CDS |
| TCAAACAACTATATATTATT+TGG | 0.151053 | 1_1:+79271288 | None:intergenic |
| TTATTAATTCAACAGATTTA+TGG | 0.151127 | 1_1:-79279109 | Msa0046850:intron |
| GTGCTGAGGAGTTGCCTTTA+GGG | 0.236578 | 1_1:-79273902 | Msa0046850:CDS |
| TATACTGTTAAAACTATTTC+CGG | 0.239397 | 1_1:-79275056 | Msa0046850:CDS |
| GAAGCCCTTCTTGATTTAAA+AGG | 0.245984 | 1_1:+79274206 | None:intergenic |
| ATGGAACTCGAATATCAAAA+TGG | 0.250441 | 1_1:-79273773 | Msa0046850:CDS |
| AATAATTGAAGCACGTGATA+TGG | 0.259383 | 1_1:-79274522 | Msa0046850:CDS |
| ACGCTCTATTGTCGGGCTTT+TGG | 0.263511 | 1_1:-79275796 | Msa0046850:CDS |
| CTTAACAAGTGTGAAAACTA+TGG | 0.277406 | 1_1:-79273990 | Msa0046850:CDS |
| GGAGAAAGCATTAGTTTCTT+TGG | 0.278429 | 1_1:-79277481 | Msa0046850:CDS |
| TCATTCCCACTTCTTCTTCC+AGG | 0.281240 | 1_1:+79274440 | None:intergenic |
| GGGGACTAGTTGGCAAGTTT+TGG | 0.281447 | 1_1:-79272346 | Msa0046850:CDS |
| AGTGCTGAGGAGTTGCCTTT+AGG | 0.283166 | 1_1:-79273903 | Msa0046850:CDS |
| GGCAAAAGTTTCTGAAATCT+TGG | 0.298280 | 1_1:+79274161 | None:intergenic |
| CTTGAAATCCGACGAGGAAT+TGG | 0.310309 | 1_1:-79278969 | Msa0046850:CDS |
| AAATCATTAGAATTTGATTC+AGG | 0.312731 | 1_1:+79278992 | None:intergenic |
| CGCAAATCCAGATCTGAAAT+TGG | 0.314614 | 1_1:-79274410 | Msa0046850:CDS |
| TGAAGCTTGATTATATAGTT+TGG | 0.322972 | 1_1:-79271232 | Msa0046850:three_prime_UTR |
| GGAATTGGCCAGGCTCTTGC+AGG | 0.326496 | 1_1:-79278954 | Msa0046850:intron |
| AGTTGTTTGATTATATAGTT+TGG | 0.341629 | 1_1:-79271275 | Msa0046850:three_prime_UTR |
| TCTACTTCCCGGCTGCAAAT+TGG | 0.346629 | 1_1:-79271550 | Msa0046850:CDS |
| ATCCCTTTCTGGGGCATCAT+TGG | 0.355024 | 1_1:+79273197 | None:intergenic |
| TGGACTTTACAGACCATGTT+TGG | 0.368078 | 1_1:-79275142 | Msa0046850:CDS |
| ATCGTATTCGAGATCAAAAT+TGG | 0.368942 | 1_1:+79279259 | None:intergenic |
| CCGAGGGAAGCGAGTCAGTT+TGG | 0.370194 | 1_1:+79276004 | None:intergenic |
| GCAAACCCCTCTCAAGTTGC+TGG | 0.373079 | 1_1:+79274492 | None:intergenic |
| TCTTGATTTAAAAGGGGAAC+TGG | 0.377723 | 1_1:+79274214 | None:intergenic |
| AATTACCTGAACAGATTAGA+TGG | 0.386230 | 1_1:+79272252 | None:intergenic |
| TCTGGTTCAAACGATCCTTC+AGG | 0.388715 | 1_1:-79276917 | Msa0046850:intron |
| ATCAGAACCAATTTCAGATC+TGG | 0.389932 | 1_1:+79274403 | None:intergenic |
| TCGTCTACACACAATCGAAT+TGG | 0.392170 | 1_1:+79274359 | None:intergenic |
| TGAAAATTACCATGAGGACT+TGG | 0.392754 | 1_1:+79278760 | None:intergenic |
| GAGAGGGCCGCTGTGGAGAA+TGG | 0.395344 | 1_1:-79275831 | Msa0046850:CDS |
| AGAGTGCTACTCTCAATTCC+TGG | 0.397847 | 1_1:-79275117 | Msa0046850:CDS |
| TCAGTTGAAATTTGAGTATG+AGG | 0.397901 | 1_1:+79279079 | None:intergenic |
| AGTCCATCGGATCCCTTTCT+GGG | 0.398635 | 1_1:+79273187 | None:intergenic |
| ATTTGCTTTACTAGCTTGTC+AGG | 0.400215 | 1_1:-79271324 | Msa0046850:three_prime_UTR |
| AGATCAAATGGAGGAGAGTC+AGG | 0.409734 | 1_1:-79277773 | Msa0046850:CDS |
| TAACATATTATGTTCATTCA+AGG | 0.415697 | 1_1:+79271377 | None:intergenic |
| GCAAAAGTTTCTGAAATCTT+GGG | 0.415921 | 1_1:+79274162 | None:intergenic |
| TCCGTCTTCAGTGGAAATCA+TGG | 0.428503 | 1_1:-79278532 | Msa0046850:intron |
| CTTCTTACCACGGCGTCTAC+TGG | 0.429017 | 1_1:+79277799 | None:intergenic |
| ACAATAGAGCGTAAAGCAAT+TGG | 0.429620 | 1_1:+79275807 | None:intergenic |
| ATTGCTTTACGCTCTATTGT+CGG | 0.430832 | 1_1:-79275804 | Msa0046850:CDS |
| TCCGAAGCTGTCAAAGTACT+TGG | 0.431539 | 1_1:-79274266 | Msa0046850:CDS |
| TGTGTCAATTGTACCTTCCC+AGG | 0.433435 | 1_1:+79275099 | None:intergenic |
| AGGGTTGAAGTTTGTTCGGT+TGG | 0.433488 | 1_1:-79274080 | Msa0046850:CDS |
| AAGCCCTTCTTGATTTAAAA+GGG | 0.433855 | 1_1:+79274207 | None:intergenic |
| TATTTGACTGTGTAGGTTGT+TGG | 0.434002 | 1_1:-79273281 | Msa0046850:intron |
| CAGTATTTCGAGCAGCCTCC+TGG | 0.436329 | 1_1:+79277523 | None:intergenic |
| TTTAGTCGATCTCCAGATCC+TGG | 0.442103 | 1_1:-79275162 | Msa0046850:intron |
| TTGCTTTACGCTCTATTGTC+GGG | 0.447167 | 1_1:-79275803 | Msa0046850:CDS |
| GGAGGAGAGTCAGGTTAAAG+AGG | 0.447178 | 1_1:-79277764 | Msa0046850:intron |
| AAGACAATCAGTCTACTTCC+CGG | 0.447590 | 1_1:-79271561 | Msa0046850:CDS |
| GATTACGAAAGGAATTCTCT+TGG | 0.447659 | 1_1:-79274243 | Msa0046850:CDS |
| CCCAAGTACTTTGACAGCTT+CGG | 0.448275 | 1_1:+79274265 | None:intergenic |
| CGTCTACACACAATCGAATT+GGG | 0.450312 | 1_1:+79274360 | None:intergenic |
| CCACTTCCTTGTGTATCGTT+TGG | 0.452656 | 1_1:+79274784 | None:intergenic |
| CTTCAAGGGTTGAACAATAT+CGG | 0.454562 | 1_1:-79276538 | Msa0046850:intron |
| TGGGAGGGTTGAAGTTTGTT+CGG | 0.454654 | 1_1:-79274084 | Msa0046850:CDS |
| CGAAGATACTCAGCAATTTG+AGG | 0.455310 | 1_1:-79278805 | Msa0046850:CDS |
| CAGAAGTGAGAGAGTAAAGC+TGG | 0.457014 | 1_1:+79279207 | None:intergenic |
| GTTATTGCCATAGCGAAAGA+TGG | 0.459044 | 1_1:-79274821 | Msa0046850:CDS |
| GACGAGTCCCTCTCGTTACC+TGG | 0.465427 | 1_1:-79274458 | Msa0046850:CDS |
| TGTTCCTCCCGATCAACAAA+AGG | 0.468347 | 1_1:-79279186 | Msa0046850:intron |
| CTCGAATACGATACCGATGA+TGG | 0.468688 | 1_1:-79279248 | Msa0046850:CDS |
| AGAGGGCCGCTGTGGAGAAT+GGG | 0.471131 | 1_1:-79275830 | Msa0046850:CDS |
| TCTAGAGCATCTAGCACAAC+GGG | 0.472269 | 1_1:+79274029 | None:intergenic |
| TGTAAAGCCTCTTCGACATT+CGG | 0.475196 | 1_1:+79274559 | None:intergenic |
| CAGGTAACATCAGCATTTGA+TGG | 0.478228 | 1_1:-79273792 | Msa0046850:CDS |
| TTGTTGAGGATGATCATTGA+TGG | 0.478920 | 1_1:+79279015 | None:intergenic |
| ACTAGCTTGTCAGGTAATGC+TGG | 0.483121 | 1_1:-79271315 | Msa0046850:three_prime_UTR |
| GAAGAACCAAATGGAGCAAA+AGG | 0.486960 | 1_1:-79273750 | Msa0046850:intron |
| AGCACTTGAAACGACTGAAC+CGG | 0.491878 | 1_1:+79273920 | None:intergenic |
| AAATAAAACCTGCAAGAGCC+TGG | 0.493495 | 1_1:+79278946 | None:intergenic |
| TGTACTTCATCAATTTATTG+AGG | 0.494669 | 1_1:-79274303 | Msa0046850:CDS |
| GAAGATACTCAGCAATTTGA+GGG | 0.495547 | 1_1:-79278804 | Msa0046850:CDS |
| GGTAAGAAGAGTAGATCAAA+TGG | 0.497053 | 1_1:-79277785 | Msa0046850:CDS |
| ACCAGAAAAGCAGCTGTAGC+AGG | 0.500324 | 1_1:+79276934 | None:intergenic |
| GGTCTGTAAAGTCCAGGATC+TGG | 0.504798 | 1_1:+79275150 | None:intergenic |
| TGGAACTCGAATATCAAAAT+GGG | 0.506848 | 1_1:-79273772 | Msa0046850:CDS |
| AAGTTAAATAGATTACATTC+CGG | 0.506867 | 1_1:-79273939 | Msa0046850:CDS |
| TCAATAAATTGATGAAGTAC+AGG | 0.507055 | 1_1:+79274305 | None:intergenic |
| TTAACAAGTGTGAAAACTAT+GGG | 0.510403 | 1_1:-79273989 | Msa0046850:CDS |
| AGACTCTTTATGGAGCTTCA+AGG | 0.514131 | 1_1:-79276553 | Msa0046850:CDS |
| TGCCAATGATGCCCCAGAAA+GGG | 0.515074 | 1_1:-79273199 | Msa0046850:CDS |
| GCGAGTCAGTTTGGAGCAAA+CGG | 0.515752 | 1_1:+79276013 | None:intergenic |
| CAGCTCATTGTGTAAATCTA+CGG | 0.517200 | 1_1:-79278508 | Msa0046850:CDS |
| CAATACTACCAATTTGCAGC+CGG | 0.522936 | 1_1:+79271542 | None:intergenic |
| GACTCTTTATGGAGCTTCAA+GGG | 0.523214 | 1_1:-79276552 | Msa0046850:CDS |
| ATGAGGACTTGGGCAACATA+AGG | 0.523247 | 1_1:+79278771 | None:intergenic |
| TTTATAATGATTTGGCATAG+AGG | 0.529828 | 1_1:+79271518 | None:intergenic |
| AGTGCTAAAGAAGTTACTAC+AGG | 0.529985 | 1_1:+79274053 | None:intergenic |
| TAAAGAGTCTCAGAAGGAAG+TGG | 0.531025 | 1_1:+79276566 | None:intergenic |
| GAATTTGATTCAGGTTGTTG+AGG | 0.533328 | 1_1:+79279001 | None:intergenic |
| TCAAAATGGGAAGAACCAAA+TGG | 0.536257 | 1_1:-79273759 | Msa0046850:CDS |
| GAAGTGGAGCAGTCATACCT+TGG | 0.537078 | 1_1:+79276582 | None:intergenic |
| GAAAATTACCATGAGGACTT+GGG | 0.538799 | 1_1:+79278761 | None:intergenic |
| AAGAAAACCAGCAACTTGAG+AGG | 0.539688 | 1_1:-79274499 | Msa0046850:CDS |
| TAAGCATAGTACGTCGAGAA+AGG | 0.540163 | 1_1:+79274621 | None:intergenic |
| GCAATGATGAGGGGACTAGT+TGG | 0.540874 | 1_1:-79272356 | Msa0046850:CDS |
| TCGTTACCTGGAAGAAGAAG+TGG | 0.544069 | 1_1:-79274446 | Msa0046850:CDS |
| AATCTATTTAACTTCAGAAG+TGG | 0.546179 | 1_1:+79273948 | None:intergenic |
| AAGTGGAGCAGTCATACCTT+GGG | 0.546568 | 1_1:+79276583 | None:intergenic |
| TGGAGTCGTTGTGAACAACT+TGG | 0.547631 | 1_1:+79279279 | None:intergenic |
| CTGCCAATGATGCCCCAGAA+AGG | 0.548804 | 1_1:-79273200 | Msa0046850:CDS |
| GATAATTATTATGAGACGGA+GGG | 0.548833 | 1_1:+79271197 | None:intergenic |
| AGAAGAAGAAAGACATCTCG+TGG | 0.550685 | 1_1:+79279383 | None:intergenic |
| GTATGAAGATGAAAGGCGCC+AGG | 0.552544 | 1_1:-79277541 | Msa0046850:CDS |
| CCAAACTGACTCGCTTCCCT+CGG | 0.553302 | 1_1:-79276004 | Msa0046850:CDS |
| AAGAAGAGTAGATCAAATGG+AGG | 0.556047 | 1_1:-79277782 | Msa0046850:CDS |
| CAGAAAGGGATCCGATGGAC+TGG | 0.556309 | 1_1:-79273185 | Msa0046850:intron |
| ACGAGTTCCATCTTTCGCTA+TGG | 0.558437 | 1_1:+79274814 | None:intergenic |
| AGAAAACCAGCAACTTGAGA+GGG | 0.560341 | 1_1:-79274498 | Msa0046850:CDS |
| AGATAATTATTATGAGACGG+AGG | 0.561262 | 1_1:+79271196 | None:intergenic |
| CCGTCTTCAGTGGAAATCAT+GGG | 0.563909 | 1_1:-79278531 | Msa0046850:intron |
| TGACAAGAAGTTTGAGCTTG+TGG | 0.567683 | 1_1:-79273238 | Msa0046850:CDS |
| TTCAGTCGTTTCAAGTGCTG+AGG | 0.568002 | 1_1:-79273916 | Msa0046850:CDS |
| AATGAACTCACAATCCCTAA+AGG | 0.569998 | 1_1:+79273888 | None:intergenic |
| AAACATGGTCTGTAAAGTCC+AGG | 0.571674 | 1_1:+79275144 | None:intergenic |
| TTATGTTGCCCAAGTCCTCA+TGG | 0.572061 | 1_1:-79278769 | Msa0046850:intron |
| TGTTCATGTGGAAGAGCTTG+AGG | 0.573062 | 1_1:-79277502 | Msa0046850:CDS |
| CTGTTAAAACTATTTCCGGC+GGG | 0.573466 | 1_1:-79275052 | Msa0046850:CDS |
| AATACTACCAATTTGCAGCC+GGG | 0.578177 | 1_1:+79271543 | None:intergenic |
| TGCCCCAGAAAGGGATCCGA+TGG | 0.581689 | 1_1:-79273190 | Msa0046850:CDS |
| AAGAGATAATTATTATGAGA+CGG | 0.583214 | 1_1:+79271193 | None:intergenic |
| TTGATCTACTCTTCTTACCA+CGG | 0.584343 | 1_1:+79277789 | None:intergenic |
| AAAGTACTTGGGATTACGAA+AGG | 0.585398 | 1_1:-79274254 | Msa0046850:CDS |
| GAGTGCTACTCTCAATTCCT+GGG | 0.585909 | 1_1:-79275116 | Msa0046850:CDS |
| GCTCCATAAAGAGTCTCAGA+AGG | 0.590040 | 1_1:+79276560 | None:intergenic |
| CTTGAAGGAAGCAATGATGA+GGG | 0.591020 | 1_1:-79272366 | Msa0046850:CDS |
| TCTCATTTCAACTTTCAGAA+CGG | 0.591239 | 1_1:-79279357 | Msa0046850:five_prime_UTR |
| TCTTGCAGTATGAAGATGAA+AGG | 0.592536 | 1_1:-79277548 | Msa0046850:intron |
| AATCCGACGAGGAATTGGCC+AGG | 0.592841 | 1_1:-79278964 | Msa0046850:CDS |
| GCACCACCTTGTCGTGATTG+TGG | 0.596266 | 1_1:-79276620 | Msa0046850:CDS |
| AAGAACTTCGAAGCCATCAT+CGG | 0.597781 | 1_1:+79279235 | None:intergenic |
| TCAAGTAAATCATCAAAAGA+CGG | 0.598602 | 1_1:+79274140 | None:intergenic |
| AGTAGCACTCTGTCCAAACA+TGG | 0.599631 | 1_1:+79275129 | None:intergenic |
| GCAGCTTGTGGAAACAAGAG+AGG | 0.606363 | 1_1:-79275848 | Msa0046850:intron |
| CCGAAGCTGTCAAAGTACTT+GGG | 0.608223 | 1_1:-79274265 | Msa0046850:CDS |
| CCAAACGATACACAAGGAAG+TGG | 0.609574 | 1_1:-79274784 | Msa0046850:CDS |
| AAAAGTCAATACGGATGGGA+GGG | 0.610214 | 1_1:-79274099 | Msa0046850:CDS |
| TCTTGAAGGAAGCAATGATG+AGG | 0.615309 | 1_1:-79272367 | Msa0046850:CDS |
| AGCCCTTCTTGATTTAAAAG+GGG | 0.615538 | 1_1:+79274208 | None:intergenic |
| AGAACAAAACACTGTCCCGC+CGG | 0.616171 | 1_1:+79275037 | None:intergenic |
| CGTTACCTGGAAGAAGAAGT+GGG | 0.617601 | 1_1:-79274445 | Msa0046850:CDS |
| CATTGTGTAAATCTACGGCA+TGG | 0.620655 | 1_1:-79278503 | Msa0046850:CDS |
| GCTACTCTCAATTCCTGGGA+AGG | 0.621865 | 1_1:-79275112 | Msa0046850:CDS |
| CAGCTTGTGGAAACAAGAGA+GGG | 0.624009 | 1_1:-79275847 | Msa0046850:CDS |
| GCTAAGAAAATAACAACTCG+AGG | 0.624134 | 1_1:-79279333 | Msa0046850:five_prime_UTR |
| ACTGTTAAAACTATTTCCGG+CGG | 0.624553 | 1_1:-79275053 | Msa0046850:CDS |
| TAAAGTCCATACCAGTCCAT+CGG | 0.625103 | 1_1:+79273174 | None:intergenic |
| TGCTCGAAATACTGTTCATG+TGG | 0.625504 | 1_1:-79277514 | Msa0046850:CDS |
| TTCTTCTTCCAGGTAACGAG+AGG | 0.625886 | 1_1:+79274450 | None:intergenic |
| GAAACAAGAGAGGGCCGCTG+TGG | 0.626934 | 1_1:-79275838 | Msa0046850:CDS |
| GTTGCTAAGAACTGAATCGA+TGG | 0.630367 | 1_1:+79274184 | None:intergenic |
| GAAGAAGTGGGAATGAGCAA+TGG | 0.638776 | 1_1:-79274433 | Msa0046850:CDS |
| ATAACCACCGAATGTCGAAG+AGG | 0.641291 | 1_1:-79274566 | Msa0046850:CDS |
| ATCTAGAGCATCTAGCACAA+CGG | 0.643514 | 1_1:+79274028 | None:intergenic |
| GAAAACCAGCAACTTGAGAG+GGG | 0.644188 | 1_1:-79274497 | Msa0046850:CDS |
| GTCCATCGGATCCCTTTCTG+GGG | 0.645986 | 1_1:+79273188 | None:intergenic |
| GAGAAGACCAGTAGACGCCG+TGG | 0.651450 | 1_1:-79277806 | Msa0046850:CDS |
| ACGGTCTTTAAAGAACTGAG+AGG | 0.653442 | 1_1:+79272314 | None:intergenic |
| AAAGCCTCTTCGACATTCGG+TGG | 0.655801 | 1_1:+79274562 | None:intergenic |
| GAGCCTGGCCAATTCCTCGT+CGG | 0.656444 | 1_1:+79278961 | None:intergenic |
| GCTAGATGCTCTAGATGACA+TGG | 0.661812 | 1_1:-79274021 | Msa0046850:CDS |
| GGCAACGACACTGTAGCCCA+AGG | 0.666449 | 1_1:-79276599 | Msa0046850:CDS |
| GTGAGTACAGATGACACAGA+AGG | 0.668969 | 1_1:+79274593 | None:intergenic |
| TCTTCTTCCAGGTAACGAGA+GGG | 0.677052 | 1_1:+79274451 | None:intergenic |
| GTTCTGAAAGTTGAAATGAG+AGG | 0.679193 | 1_1:+79279359 | None:intergenic |
| ATCTCGTGGAATAGAGTACG+TGG | 0.683692 | 1_1:+79279397 | None:intergenic |
| TTGAAGGAAGCAATGATGAG+GGG | 0.688958 | 1_1:-79272365 | Msa0046850:CDS |
| GTGCTAAAGAAGTTACTACA+GGG | 0.693044 | 1_1:+79274054 | None:intergenic |
| TGAAGATGAAAGGCGCCAGG+AGG | 0.693652 | 1_1:-79277538 | Msa0046850:CDS |
| ATGTCACCAAACGATACACA+AGG | 0.703644 | 1_1:-79274790 | Msa0046850:CDS |
| ATACACAAGGAAGTGGCACG+AGG | 0.708621 | 1_1:-79274777 | Msa0046850:intron |
| AATTGGCCCATTCTCCACAG+CGG | 0.718159 | 1_1:+79275824 | None:intergenic |
| TCGTTGCCACAATCACGACA+AGG | 0.727103 | 1_1:+79276614 | None:intergenic |
| TTGCCACAATCACGACAAGG+TGG | 0.734523 | 1_1:+79276617 | None:intergenic |
| AAGCAAATTAAAATTCAATG+CGG | 0.738783 | 1_1:+79271339 | None:intergenic |
| TGATTTCTTGAAATCCGACG+AGG | 0.741852 | 1_1:-79278975 | Msa0046850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATATTTAAAAAAAAAA+AGG | + | chr1_1:79274270-79274289 | None:intergenic | 0.0% |
| !! | AATTAAGAATAAAAATAAAG+AGG | + | chr1_1:79271464-79271483 | None:intergenic | 10.0% |
| !!! | GAATTAAATTTGAATTTTTT+TGG | + | chr1_1:79271965-79271984 | None:intergenic | 10.0% |
| !!! | CTATTTTCTTAAATTATTAT+TGG | + | chr1_1:79273392-79273411 | None:intergenic | 10.0% |
| !! | TAATAATTTAAGAAAATAGA+AGG | - | chr1_1:79273393-79273412 | Msa0046850:intron | 10.0% |
| !! | AATAATTTAAGAAAATAGAA+GGG | - | chr1_1:79273394-79273413 | Msa0046850:intron | 10.0% |
| !! | GTTTAAATTAGTTATTATAT+TGG | - | chr1_1:79273702-79273721 | Msa0046850:intron | 10.0% |
| !! | TATATTTAAAAAAAAAAAGG+CGG | + | chr1_1:79274267-79274286 | None:intergenic | 10.0% |
| !!! | TTTTAAACTTTTTAAATCTA+TGG | - | chr1_1:79275725-79275744 | Msa0046850:intron | 10.0% |
| !! | TTATACATATAAAATAAATC+AGG | + | chr1_1:79276735-79276754 | None:intergenic | 10.0% |
| !!! | TTCAAAAAAAATATTTTACA+GGG | + | chr1_1:79278598-79278617 | None:intergenic | 10.0% |
| !!! | ATTCAAAAAAAATATTTTAC+AGG | + | chr1_1:79278599-79278618 | None:intergenic | 10.0% |
| !!! | ACTATATTTTTATAATGATT+TGG | + | chr1_1:79279090-79279109 | None:intergenic | 10.0% |
| !! | TTATTAATTCAACAGATTTA+TGG | - | chr1_1:79271488-79271507 | Msa0046850:three_prime_UTR | 15.0% |
| !!! | TTGTGATTTTTTATTTTTAC+AGG | - | chr1_1:79271729-79271748 | Msa0046850:intron | 15.0% |
| !!! | TTACTAAAGAGATAATTTTT+TGG | - | chr1_1:79272247-79272266 | Msa0046850:intron | 15.0% |
| !!! | CATAATTTTAATGTCAAATA+CGG | - | chr1_1:79272400-79272419 | Msa0046850:intron | 15.0% |
| !! | AATTTATTAGGTCAATTAAA+AGG | + | chr1_1:79275690-79275709 | None:intergenic | 15.0% |
| !! | ACAAAAACAACTAATTTATT+AGG | + | chr1_1:79275702-79275721 | None:intergenic | 15.0% |
| !! | AATTAGTATTTAGTAGAAAT+AGG | + | chr1_1:79277031-79277050 | None:intergenic | 15.0% |
| !! | TTATAATTATTGTTAATGAG+TGG | - | chr1_1:79277484-79277503 | Msa0046850:CDS | 15.0% |
| !!! | TTCTTTAAAGAAATATAAAG+AGG | + | chr1_1:79277525-79277544 | None:intergenic | 15.0% |
| !!! | TATTTCTTTAAAGAAAGAAA+TGG | - | chr1_1:79277549-79277568 | Msa0046850:intron | 15.0% |
| !!! | TTTCTTTATATTTGTTTCTT+TGG | - | chr1_1:79278102-79278121 | Msa0046850:intron | 15.0% |
| !!! | TCAAAAAAAATATTTTACAG+GGG | + | chr1_1:79278597-79278616 | None:intergenic | 15.0% |
| !!! | ATCCAAAAAAAATATTTTAC+AGG | - | chr1_1:79278814-79278833 | Msa0046850:CDS | 15.0% |
| !!! | TCCAAAAAAAATATTTTACA+GGG | - | chr1_1:79278815-79278834 | Msa0046850:CDS | 15.0% |
| !! | TCAAACAACTATATATTATT+TGG | + | chr1_1:79279312-79279331 | None:intergenic | 15.0% |
| !! | AAATCATTAGAATTTGATTC+AGG | + | chr1_1:79271608-79271627 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTTAATTTTTCAC+AGG | - | chr1_1:79271685-79271704 | Msa0046850:intron | 20.0% |
| !! | ATAAAATGAAAATTACCATG+AGG | + | chr1_1:79271846-79271865 | None:intergenic | 20.0% |
| !!! | GAATTTTTTTGGACTAAATT+TGG | + | chr1_1:79271954-79271973 | None:intergenic | 20.0% |
| !! | CATTTAAAAAAAGCTAAAAC+TGG | - | chr1_1:79272037-79272056 | Msa0046850:intron | 20.0% |
| !!! | TAAAGAGATAATTTTTTGGA+GGG | - | chr1_1:79272251-79272270 | Msa0046850:intron | 20.0% |
| !!! | TGTTGACATTTTTTCATTTA+TGG | - | chr1_1:79272281-79272300 | Msa0046850:CDS | 20.0% |
| !!! | GTTGACATTTTTTCATTTAT+GGG | - | chr1_1:79272282-79272301 | Msa0046850:CDS | 20.0% |
| !!! | TGATGTAATTAATTTTGTTG+AGG | + | chr1_1:79272574-79272593 | None:intergenic | 20.0% |
| !!! | CTAAATCTTTTCTAATCTAA+TGG | + | chr1_1:79272879-79272898 | None:intergenic | 20.0% |
| !! | TTAGATTAGAAAAGATTTAG+AGG | - | chr1_1:79272879-79272898 | Msa0046850:intron | 20.0% |
| !!! | CAATGATGTAATTTTTTTAG+AGG | - | chr1_1:79273195-79273214 | Msa0046850:CDS | 20.0% |
| !!! | ATGAATTTTCAGAATAGTTA+GGG | + | chr1_1:79273279-79273298 | None:intergenic | 20.0% |
| !!! | AATGAATTTTCAGAATAGTT+AGG | + | chr1_1:79273280-79273299 | None:intergenic | 20.0% |
| !! | AATAACTAATTTAAACCTGA+AGG | + | chr1_1:79273698-79273717 | None:intergenic | 20.0% |
| !! | TATGATTCACATAATATTTG+TGG | - | chr1_1:79273823-79273842 | Msa0046850:intron | 20.0% |
| !! | TAATTCTAAATAAATGCAGA+TGG | + | chr1_1:79274361-79274380 | None:intergenic | 20.0% |
| !!! | AATTTAGTTCATAAAAAGAC+AGG | + | chr1_1:79274406-79274425 | None:intergenic | 20.0% |
| !! | TGAATTTGAAAAGGAATAAA+GGG | + | chr1_1:79274725-79274744 | None:intergenic | 20.0% |
| !! | TTGAATTTGAAAAGGAATAA+AGG | + | chr1_1:79274726-79274745 | None:intergenic | 20.0% |
| !! | AATGTTTGATATATGACATT+TGG | + | chr1_1:79275033-79275052 | None:intergenic | 20.0% |
| !! | TTCAATTAAGAATATTTAGC+AGG | + | chr1_1:79275139-79275158 | None:intergenic | 20.0% |
| !! | AAGACAAACATATTTATAGT+GGG | + | chr1_1:79275395-79275414 | None:intergenic | 20.0% |
| !! | TATACTGTTAAAACTATTTC+CGG | - | chr1_1:79275541-79275560 | Msa0046850:intron | 20.0% |
| !! | AAGCCATTATTATATGAAAA+AGG | - | chr1_1:79275642-79275661 | Msa0046850:intron | 20.0% |
| !! | AGCCATTATTATATGAAAAA+GGG | - | chr1_1:79275643-79275662 | Msa0046850:intron | 20.0% |
| !!! | TACCCTTTTTCATATAATAA+TGG | + | chr1_1:79275648-79275667 | None:intergenic | 20.0% |
| !! | TTGATTATAAAGAAAACACA+AGG | + | chr1_1:79275870-79275889 | None:intergenic | 20.0% |
| !! | AAGTTAAATAGATTACATTC+CGG | - | chr1_1:79276658-79276677 | Msa0046850:intron | 20.0% |
| !! | CTTATTAAATAACTTCTTTG+CGG | - | chr1_1:79276881-79276900 | Msa0046850:intron | 20.0% |
| !! | ACTAAATACTAATTCTATTG+AGG | - | chr1_1:79277037-79277056 | Msa0046850:intron | 20.0% |
| !! | AATCTTCTTAATGTAAGATT+TGG | - | chr1_1:79277061-79277080 | Msa0046850:intron | 20.0% |
| !! | ATACACCAAAATCATAATAA+TGG | + | chr1_1:79277581-79277600 | None:intergenic | 20.0% |
| !!! | TTTTCAATGTTAATAGTCTT+TGG | + | chr1_1:79277820-79277839 | None:intergenic | 20.0% |
| !!! | AAGAAGTTTTAAATCAACAA+TGG | + | chr1_1:79277860-79277879 | None:intergenic | 20.0% |
| !!! | TTGGTGATATAAAACTTATT+AGG | - | chr1_1:79277970-79277989 | Msa0046850:intron | 20.0% |
| !!! | AAAAAAAATATTTTACAGGG+GGG | + | chr1_1:79278818-79278837 | None:intergenic | 20.0% |
| !!! | CAAAAAAAATATTTTACAGG+GGG | + | chr1_1:79278817-79278836 | None:intergenic | 20.0% |
| !! | CAAAAAATCTTCAAATTACA+AGG | + | chr1_1:79278627-79278646 | None:intergenic | 20.0% |
| !!! | CTTGTAATTTGAAGATTTTT+TGG | - | chr1_1:79278625-79278644 | Msa0046850:intron | 20.0% |
| !!! | ATTTGAAGATTTTTTGGTTT+TGG | - | chr1_1:79278631-79278650 | Msa0046850:intron | 20.0% |
| !!! | AAATTTGCTCAAATTTACAA+GGG | + | chr1_1:79278676-79278695 | None:intergenic | 20.0% |
| !! | TTGTAAATTTGAGCAAATTT+CGG | - | chr1_1:79278676-79278695 | Msa0046850:intron | 20.0% |
| !!! | AAAATTTGCTCAAATTAACA+GGG | + | chr1_1:79278708-79278727 | None:intergenic | 20.0% |
| !!! | AATTTGAAGATTTTTGGTTT+TGG | + | chr1_1:79278783-79278802 | None:intergenic | 20.0% |
| !!! | CCAAAAAAAATATTTTACAG+GGG | - | chr1_1:79278816-79278835 | Msa0046850:CDS | 20.0% |
| !!! | CAAAAAAAATATTTTACAGG+GGG | - | chr1_1:79278817-79278836 | Msa0046850:CDS | 20.0% |
| !!! | ACTCTAAACAAATTTTTACA+GGG | + | chr1_1:79278888-79278907 | None:intergenic | 20.0% |
| !!! | TAAAAATTTGTTTAGAGTGT+CGG | - | chr1_1:79278890-79278909 | Msa0046850:intron | 20.0% |
| !! | AAAAAAGAAAATGCTGAATT+GGG | + | chr1_1:79279124-79279143 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCAATATGTGCA+TGG | - | chr1_1:79279160-79279179 | Msa0046850:intron | 20.0% |
| !! | TAACATATTATGTTCATTCA+AGG | + | chr1_1:79279223-79279242 | None:intergenic | 20.0% |
| !!! | TAATATGTTAACAGCTTTTA+TGG | - | chr1_1:79279233-79279252 | Msa0046850:CDS | 20.0% |
| !!! | AATATGTTAACAGCTTTTAT+GGG | - | chr1_1:79279234-79279253 | Msa0046850:CDS | 20.0% |
| !! | AAGCAAATTAAAATTCAATG+CGG | + | chr1_1:79279261-79279280 | None:intergenic | 20.0% |
| !! | AGTTGTTTGATTATATAGTT+TGG | - | chr1_1:79279322-79279341 | Msa0046850:five_prime_UTR | 20.0% |
| !! | AAGAGATAATTATTATGAGA+CGG | + | chr1_1:79279407-79279426 | None:intergenic | 20.0% |
| !! | AATGAAAACCTTTTGTTGAT+CGG | + | chr1_1:79271422-79271441 | None:intergenic | 25.0% |
| ! | ATTTCAACCATTGTAAGTTT+CGG | - | chr1_1:79271869-79271888 | Msa0046850:intron | 25.0% |
| !! | TAAGAGACTAAATTGCTATT+TGG | + | chr1_1:79271916-79271935 | None:intergenic | 25.0% |
| !!! | CTAAAGAGATAATTTTTTGG+AGG | - | chr1_1:79272250-79272269 | Msa0046850:intron | 25.0% |
| ! | GTGAAAATATCATTTCTCTT+CGG | + | chr1_1:79272378-79272397 | None:intergenic | 25.0% |
| !! | TAATTTTGTTGAGGACAATA+GGG | + | chr1_1:79272565-79272584 | None:intergenic | 25.0% |
| !! | TTAATTTTGTTGAGGACAAT+AGG | + | chr1_1:79272566-79272585 | None:intergenic | 25.0% |
| !!! | ATGATTGATTTTATGAGTGT+TGG | - | chr1_1:79272593-79272612 | Msa0046850:intron | 25.0% |
| !!! | TGATTGATTTTATGAGTGTT+GGG | - | chr1_1:79272594-79272613 | Msa0046850:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr1_1:79272745-79272764 | Msa0046850:intron | 25.0% |
| !! | TCTAATCTAATGGTTTTCTT+AGG | + | chr1_1:79272869-79272888 | None:intergenic | 25.0% |
| ! | CTCTTGAAAGAAAAATTTAC+AGG | + | chr1_1:79273154-79273173 | None:intergenic | 25.0% |
| ! | AAATTACATCATTGATCACA+AGG | + | chr1_1:79273189-79273208 | None:intergenic | 25.0% |
| !! | AAACTAACTAACTCCTTTTA+CGG | - | chr1_1:79273250-79273269 | Msa0046850:CDS | 25.0% |
| !!! | TGCTACAATTGTTTTGTAAT+TGG | - | chr1_1:79273572-79273591 | Msa0046850:intron | 25.0% |
| !! | TAAGCCTGATAAATATTTTC+AGG | - | chr1_1:79273597-79273616 | Msa0046850:intron | 25.0% |
| !! | TAAAAAAAGTGCGTAAGTAT+AGG | + | chr1_1:79273901-79273920 | None:intergenic | 25.0% |
| !! | TTTAGAATTAGAACATGTCT+TGG | - | chr1_1:79274371-79274390 | Msa0046850:CDS | 25.0% |
| ! | TAGTAACCATATATGTAACA+GGG | + | chr1_1:79274433-79274452 | None:intergenic | 25.0% |
| ! | GAAAATGCTTTATAAGCAAA+AGG | + | chr1_1:79274465-79274484 | None:intergenic | 25.0% |
| !!! | TGCTTATAAAGCATTTTCAT+AGG | - | chr1_1:79274467-79274486 | Msa0046850:CDS | 25.0% |
| !!! | CATAAGTAGAATACCTTTTT+TGG | + | chr1_1:79274628-79274647 | None:intergenic | 25.0% |
| !! | TATTCCTATCACATTTGTTT+TGG | - | chr1_1:79274694-79274713 | Msa0046850:intron | 25.0% |
| ! | CAAGACAAACATATTTATAG+TGG | + | chr1_1:79275396-79275415 | None:intergenic | 25.0% |
| ! | ATAAATATGTTTGTCTTGAG+AGG | - | chr1_1:79275398-79275417 | Msa0046850:intron | 25.0% |
| !! | CTTTTTAAATCTATGGAATC+AGG | - | chr1_1:79275732-79275751 | Msa0046850:intron | 25.0% |
| ! | CTATCAATTATTACCAATTC+AGG | + | chr1_1:79275925-79275944 | None:intergenic | 25.0% |
| !!! | TGCACCTTTTTCAAAATTTA+AGG | - | chr1_1:79275952-79275971 | Msa0046850:intron | 25.0% |
| !!! | AGGACCTTAAATTTTGAAAA+AGG | + | chr1_1:79275959-79275978 | None:intergenic | 25.0% |
| ! | TCAATAAATTGATGAAGTAC+AGG | + | chr1_1:79276295-79276314 | None:intergenic | 25.0% |
| ! | TGTACTTCATCAATTTATTG+AGG | - | chr1_1:79276294-79276313 | Msa0046850:intron | 25.0% |
| ! | TCAAGTAAATCATCAAAAGA+CGG | + | chr1_1:79276460-79276479 | None:intergenic | 25.0% |
| ! | ACTAGAGAAAAAAGTCAATA+CGG | - | chr1_1:79276489-79276508 | Msa0046850:intron | 25.0% |
| ! | TTAACAAGTGTGAAAACTAT+GGG | - | chr1_1:79276608-79276627 | Msa0046850:CDS | 25.0% |
| !! | AATCTATTTAACTTCAGAAG+TGG | + | chr1_1:79276652-79276671 | None:intergenic | 25.0% |
| !! | TGTTCTTGTTTGATAAAATC+AGG | - | chr1_1:79276786-79276805 | Msa0046850:intron | 25.0% |
| ! | ATGTTAAATTACTCATTCCT+AGG | - | chr1_1:79277095-79277114 | Msa0046850:intron | 25.0% |
| !!! | CCTTTAGAATAGTAATAAGA+TGG | + | chr1_1:79277253-79277272 | None:intergenic | 25.0% |
| ! | CCATCTTATTACTATTCTAA+AGG | - | chr1_1:79277250-79277269 | Msa0046850:intron | 25.0% |
| ! | ATGTTAATATTTGACTGTGT+AGG | - | chr1_1:79277309-79277328 | Msa0046850:intron | 25.0% |
| !! | CATCTCCATTATTATGATTT+TGG | - | chr1_1:79277573-79277592 | Msa0046850:intron | 25.0% |
| !!! | ATTATGATTTTGGTGTATGA+AGG | - | chr1_1:79277583-79277602 | Msa0046850:intron | 25.0% |
| ! | AATTCTCAAAACAAGTAGAT+AGG | + | chr1_1:79277684-79277703 | None:intergenic | 25.0% |
| !! | TATATGTTTTACGTTGGAAA+CGG | + | chr1_1:79278305-79278324 | None:intergenic | 25.0% |
| !! | TGATCATATATGTTTTACGT+TGG | + | chr1_1:79278311-79278330 | None:intergenic | 25.0% |
| !!! | TTTTAAGAGATACTAAGATG+TGG | + | chr1_1:79278457-79278476 | None:intergenic | 25.0% |
| !! | TGTAAAACCTGTTTAAAGTA+AGG | - | chr1_1:79278524-79278543 | Msa0046850:CDS | 25.0% |
| !! | GTAAAACCTGTTTAAAGTAA+GGG | - | chr1_1:79278525-79278544 | Msa0046850:intron | 25.0% |
| ! | TATTAACCCTTACTTTAAAC+AGG | + | chr1_1:79278534-79278553 | None:intergenic | 25.0% |
| !! | GAAATTTGCTCAAATTTACA+AGG | + | chr1_1:79278677-79278696 | None:intergenic | 25.0% |
| !! | AAATTTGCTCAAATTAACAG+GGG | + | chr1_1:79278707-79278726 | None:intergenic | 25.0% |
| !! | CAAAATTTGCTCAAATTAAC+AGG | + | chr1_1:79278709-79278728 | None:intergenic | 25.0% |
| !!! | CTGTTAATTTGAGCAAATTT+TGG | - | chr1_1:79278707-79278726 | Msa0046850:intron | 25.0% |
| ! | ACTGTACAAAATTGAAGATA+TGG | + | chr1_1:79278744-79278763 | None:intergenic | 25.0% |
| !! | CCTTGTAATTTGAAGATTTT+TGG | + | chr1_1:79278624-79278643 | None:intergenic | 25.0% |
| ! | CCAAAAATCTTCAAATTACA+AGG | - | chr1_1:79278786-79278805 | Msa0046850:CDS | 25.0% |
| !!! | CCCCTGTAAAATATTTTTTT+TGG | + | chr1_1:79278594-79278613 | None:intergenic | 25.0% |
| !! | CACTCTAAACAAATTTTTAC+AGG | + | chr1_1:79278889-79278908 | None:intergenic | 25.0% |
| ! | ATTACATAAAGTGTAAAGCA+AGG | + | chr1_1:79278937-79278956 | None:intergenic | 25.0% |
| !! | TTTATAATGATTTGGCATAG+AGG | + | chr1_1:79279082-79279101 | None:intergenic | 25.0% |
| ! | CAAAAAAGAAAATGCTGAAT+TGG | + | chr1_1:79279125-79279144 | None:intergenic | 25.0% |
| ! | TGAAGCTTGATTATATAGTT+TGG | - | chr1_1:79279365-79279384 | Msa0046850:five_prime_UTR | 25.0% |
| TCTCATTTCAACTTTCAGAA+CGG | - | chr1_1:79271240-79271259 | Msa0046850:three_prime_UTR | 30.0% | |
| !! | GTTTTGAACACAAAAATGGT+GGG | - | chr1_1:79271286-79271305 | Msa0046850:three_prime_UTR | 30.0% |
| ATCGTATTCGAGATCAAAAT+TGG | + | chr1_1:79271341-79271360 | None:intergenic | 30.0% | |
| ! | ATGAAAACCTTTTGTTGATC+GGG | + | chr1_1:79271421-79271440 | None:intergenic | 30.0% |
| TCAGTTGAAATTTGAGTATG+AGG | + | chr1_1:79271521-79271540 | None:intergenic | 30.0% | |
| !!! | TTTATTTTTACAGGCAGAAG+AGG | - | chr1_1:79271738-79271757 | Msa0046850:intron | 30.0% |
| AAATTGACCGAAACTTACAA+TGG | + | chr1_1:79271879-79271898 | None:intergenic | 30.0% | |
| !! | GTCTCTAGAATTATTAAGAC+AGG | + | chr1_1:79272182-79272201 | None:intergenic | 30.0% |
| !!! | TGTCCAACTTTTGAAATTCA+AGG | - | chr1_1:79272312-79272331 | Msa0046850:CDS | 30.0% |
| GTTCCTTGAATTTCAAAAGT+TGG | + | chr1_1:79272318-79272337 | None:intergenic | 30.0% | |
| ! | TTTGAAATTCAAGGAACACA+TGG | - | chr1_1:79272321-79272340 | Msa0046850:CDS | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | chr1_1:79272741-79272760 | None:intergenic | 30.0% |
| GTTCTATCAAAGACCATATT+TGG | + | chr1_1:79272919-79272938 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | - | chr1_1:79272923-79272942 | Msa0046850:intron | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | - | chr1_1:79272926-79272945 | Msa0046850:intron | 30.0% | |
| AAATTTACAGGCTCTTACTT+TGG | + | chr1_1:79273142-79273161 | None:intergenic | 30.0% | |
| !! | CCTGATAAATATTTTCAGGA+GGG | - | chr1_1:79273601-79273620 | Msa0046850:intron | 30.0% |
| !! | CTGATAAATATTTTCAGGAG+GGG | - | chr1_1:79273602-79273621 | Msa0046850:intron | 30.0% |
| !!! | TGATCTCGTTCTATTTTTGA+TGG | + | chr1_1:79273637-79273656 | None:intergenic | 30.0% |
| AGTGATGCATTTGATTCATT+GGG | + | chr1_1:79273750-79273769 | None:intergenic | 30.0% | |
| TCTTGTTCTCATCAAATAGA+TGG | - | chr1_1:79273948-79273967 | Msa0046850:CDS | 30.0% | |
| CTTGTTCTCATCAAATAGAT+GGG | - | chr1_1:79273949-79273968 | Msa0046850:CDS | 30.0% | |
| ACATTTCTGATCTCAGTAAA+AGG | + | chr1_1:79274146-79274165 | None:intergenic | 30.0% | |
| ! | TTTTACTGAGATCAGAAATG+TGG | - | chr1_1:79274145-79274164 | Msa0046850:CDS | 30.0% |
| TTTACTGAGATCAGAAATGT+GGG | - | chr1_1:79274146-79274165 | Msa0046850:CDS | 30.0% | |
| CATAAAAAGACAGGATTATC+TGG | + | chr1_1:79274397-79274416 | None:intergenic | 30.0% | |
| TTATTCCCCTGTTACATATA+TGG | - | chr1_1:79274424-79274443 | Msa0046850:CDS | 30.0% | |
| AGTAACCATATATGTAACAG+GGG | + | chr1_1:79274432-79274451 | None:intergenic | 30.0% | |
| CTAGTAACCATATATGTAAC+AGG | + | chr1_1:79274434-79274453 | None:intergenic | 30.0% | |
| !! | CGTTGATAACCAGAAAATTA+AGG | + | chr1_1:79274539-79274558 | None:intergenic | 30.0% |
| ! | TTTTTGGATCATTATACCGA+GGG | + | chr1_1:79274612-79274631 | None:intergenic | 30.0% |
| !!! | TTTTTTGGATCATTATACCG+AGG | + | chr1_1:79274613-79274632 | None:intergenic | 30.0% |
| TCGGTATAATGATCCAAAAA+AGG | - | chr1_1:79274612-79274631 | Msa0046850:CDS | 30.0% | |
| GCTGCAAATTGAATTTGAAA+AGG | + | chr1_1:79274734-79274753 | None:intergenic | 30.0% | |
| TTACCAGAACAATATTGTCA+CGG | + | chr1_1:79275056-79275075 | None:intergenic | 30.0% | |
| TTCTTAATTGAACTGTAAGC+TGG | - | chr1_1:79275147-79275166 | Msa0046850:CDS | 30.0% | |
| !! | TGATGTTTGTTGATTTCTGT+GGG | - | chr1_1:79275267-79275286 | Msa0046850:intron | 30.0% |
| AATTTACTAGCAACACTGTA+AGG | + | chr1_1:79275324-79275343 | None:intergenic | 30.0% | |
| !! | TATAGTGGGTTGTGAATATA+AGG | + | chr1_1:79275381-79275400 | None:intergenic | 30.0% |
| TTTAAATCTATGGAATCAGG+TGG | - | chr1_1:79275735-79275754 | Msa0046850:intron | 30.0% | |
| AATAATTGAAGCACGTGATA+TGG | - | chr1_1:79276075-79276094 | Msa0046850:intron | 30.0% | |
| ! | TTCCCCTTTTAAATCAAGAA+GGG | - | chr1_1:79276387-79276406 | Msa0046850:intron | 30.0% |
| AAGCCCTTCTTGATTTAAAA+GGG | + | chr1_1:79276393-79276412 | None:intergenic | 30.0% | |
| !! | GCAAAAGTTTCTGAAATCTT+GGG | + | chr1_1:79276438-79276457 | None:intergenic | 30.0% |
| AGAAAAAAGTCAATACGGAT+GGG | - | chr1_1:79276494-79276513 | Msa0046850:intron | 30.0% | |
| CTTAACAAGTGTGAAAACTA+TGG | - | chr1_1:79276607-79276626 | Msa0046850:CDS | 30.0% | |
| ATGGAACTCGAATATCAAAA+TGG | - | chr1_1:79276824-79276843 | Msa0046850:intron | 30.0% | |
| TGGAACTCGAATATCAAAAT+GGG | - | chr1_1:79276825-79276844 | Msa0046850:intron | 30.0% | |
| TCACGTCAAATTGCATTATT+AGG | - | chr1_1:79276918-79276937 | Msa0046850:CDS | 30.0% | |
| GAAATAGGTGAAAGATGAAA+CGG | + | chr1_1:79277016-79277035 | None:intergenic | 30.0% | |
| CATTTAAACTGAGTATACTC+GGG | + | chr1_1:79277219-79277238 | None:intergenic | 30.0% | |
| GCATTTAAACTGAGTATACT+CGG | + | chr1_1:79277220-79277239 | None:intergenic | 30.0% | |
| ACTGGTATGGACTTTATATT+TGG | - | chr1_1:79277430-79277449 | Msa0046850:intron | 30.0% | |
| TTATTGTTAATGAGTGGATG+AGG | - | chr1_1:79277490-79277509 | Msa0046850:CDS | 30.0% | |
| CAAAACTGGTGACATTAATT+TGG | + | chr1_1:79277609-79277628 | None:intergenic | 30.0% | |
| ACAATACACAATCTCAAAAC+TGG | + | chr1_1:79277623-79277642 | None:intergenic | 30.0% | |
| !!! | TACTTGTTTTGAGAATTGAG+AGG | - | chr1_1:79277687-79277706 | Msa0046850:intron | 30.0% |
| ! | CATTGCTCTAAATTATAGCA+AGG | - | chr1_1:79277780-79277799 | Msa0046850:CDS | 30.0% |
| !!! | GCTTTCAATTGTTTTGAAAC+AGG | - | chr1_1:79277930-79277949 | Msa0046850:intron | 30.0% |
| !!! | TTCAATTGTTTTGAAACAGG+TGG | - | chr1_1:79277933-79277952 | Msa0046850:intron | 30.0% |
| ! | ATATTTGTTTCTTTGGTGAC+TGG | - | chr1_1:79278109-79278128 | Msa0046850:intron | 30.0% |
| AATTACCTGAACAGATTAGA+TGG | + | chr1_1:79278348-79278367 | None:intergenic | 30.0% | |
| !!! | CATATTTTAGCATCTTGACA+TGG | + | chr1_1:79278492-79278511 | None:intergenic | 30.0% |
| CATGTCAAGATGCTAAAATA+TGG | - | chr1_1:79278490-79278509 | Msa0046850:CDS | 30.0% | |
| ! | AATTTGCTCAAATTAACAGG+GGG | + | chr1_1:79278706-79278725 | None:intergenic | 30.0% |
| ACAAAATTGAAGATATGGCA+GGG | + | chr1_1:79278739-79278758 | None:intergenic | 30.0% | |
| TACAAAATTGAAGATATGGC+AGG | + | chr1_1:79278740-79278759 | None:intergenic | 30.0% | |
| TGTACAGTCAAAATTCATGA+AGG | - | chr1_1:79278756-79278775 | Msa0046850:intron | 30.0% | |
| ! | TATTTTGCCAGTACCTTAAA+AGG | - | chr1_1:79279189-79279208 | Msa0046850:CDS | 30.0% |
| GATAATTATTATGAGACGGA+GGG | + | chr1_1:79279403-79279422 | None:intergenic | 30.0% | |
| AGATAATTATTATGAGACGG+AGG | + | chr1_1:79279404-79279423 | None:intergenic | 30.0% | |
| !! | GTTCTGAAAGTTGAAATGAG+AGG | + | chr1_1:79271241-79271260 | None:intergenic | 35.0% |
| GCTAAGAAAATAACAACTCG+AGG | - | chr1_1:79271264-79271283 | Msa0046850:three_prime_UTR | 35.0% | |
| !!! | CGAGGTTTTGAACACAAAAA+TGG | - | chr1_1:79271282-79271301 | Msa0046850:three_prime_UTR | 35.0% |
| !!! | GGTTTTGAACACAAAAATGG+TGG | - | chr1_1:79271285-79271304 | Msa0046850:three_prime_UTR | 35.0% |
| TTGTTGAGGATGATCATTGA+TGG | + | chr1_1:79271585-79271604 | None:intergenic | 35.0% | |
| !! | GAATTTGATTCAGGTTGTTG+AGG | + | chr1_1:79271599-79271618 | None:intergenic | 35.0% |
| GAAGATACTCAGCAATTTGA+GGG | - | chr1_1:79271793-79271812 | Msa0046850:intron | 35.0% | |
| GAAAATTACCATGAGGACTT+GGG | + | chr1_1:79271839-79271858 | None:intergenic | 35.0% | |
| TGAAAATTACCATGAGGACT+TGG | + | chr1_1:79271840-79271859 | None:intergenic | 35.0% | |
| CAGCTCATTGTGTAAATCTA+CGG | - | chr1_1:79272089-79272108 | Msa0046850:intron | 35.0% | |
| TTAAGACAGGTATTTCGCAA+AGG | + | chr1_1:79272169-79272188 | None:intergenic | 35.0% | |
| TCAATATGTCAGTCTGTCAT+TGG | - | chr1_1:79272210-79272229 | Msa0046850:intron | 35.0% | |
| CACAACTGTTTGTCAAAATG+AGG | - | chr1_1:79272536-79272555 | Msa0046850:intron | 35.0% | |
| !!! | TTGATTTTATGAGTGTTGGG+CGG | - | chr1_1:79272597-79272616 | Msa0046850:intron | 35.0% |
| AGACTAGACATGATAGGATT+AGG | - | chr1_1:79272686-79272705 | Msa0046850:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | chr1_1:79272734-79272753 | Msa0046850:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr1_1:79272754-79272773 | Msa0046850:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr1_1:79272759-79272778 | Msa0046850:intron | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | + | chr1_1:79272811-79272830 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | - | chr1_1:79272812-79272831 | Msa0046850:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | chr1_1:79272815-79272834 | Msa0046850:intron | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr1_1:79272891-79272910 | Msa0046850:intron | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr1_1:79272903-79272922 | Msa0046850:intron | 35.0% |
| TCTTGCAGTATGAAGATGAA+AGG | - | chr1_1:79273049-79273068 | Msa0046850:intron | 35.0% | |
| !! | GGAGAAAGCATTAGTTTCTT+TGG | - | chr1_1:79273116-79273135 | Msa0046850:intron | 35.0% |
| ATAGTTAGGGATACCGTAAA+AGG | + | chr1_1:79273266-79273285 | None:intergenic | 35.0% | |
| ! | TTCTGAAAATTCATTCACCC+TGG | - | chr1_1:79273285-79273304 | Msa0046850:intron | 35.0% |
| CAAAAAGACAGACAAATCCA+GGG | + | chr1_1:79273305-79273324 | None:intergenic | 35.0% | |
| ACAAAAAGACAGACAAATCC+AGG | + | chr1_1:79273306-79273325 | None:intergenic | 35.0% | |
| ACCAACACAAACACATACAT+TGG | - | chr1_1:79273344-79273363 | Msa0046850:intron | 35.0% | |
| TCCAATGTATGTGTTTGTGT+TGG | + | chr1_1:79273348-79273367 | None:intergenic | 35.0% | |
| !! | GCCTGATAAATATTTTCAGG+AGG | - | chr1_1:79273600-79273619 | Msa0046850:intron | 35.0% |
| CCCTCCTGAAAATATTTATC+AGG | + | chr1_1:79273604-79273623 | None:intergenic | 35.0% | |
| CAGTGATGCATTTGATTCAT+TGG | + | chr1_1:79273751-79273770 | None:intergenic | 35.0% | |
| CAATGAATCAAATGCATCAC+TGG | - | chr1_1:79273749-79273768 | Msa0046850:intron | 35.0% | |
| CTTCAAGGGTTGAACAATAT+CGG | - | chr1_1:79274059-79274078 | Msa0046850:CDS | 35.0% | |
| GACGAAGTATAGCTTAATGA+AGG | + | chr1_1:79274237-79274256 | None:intergenic | 35.0% | |
| GATTGTTGATCTTGCATAAC+AGG | + | chr1_1:79274332-79274351 | None:intergenic | 35.0% | |
| ACCAGAAAATTAAGGAAGTC+AGG | + | chr1_1:79274531-79274550 | None:intergenic | 35.0% | |
| GTGTCCAAAACAAATGTGAT+AGG | + | chr1_1:79274701-79274720 | None:intergenic | 35.0% | |
| CAAATTCAATTTGCAGCTTG+TGG | - | chr1_1:79274737-79274756 | Msa0046850:intron | 35.0% | |
| ACAATAGAGCGTAAAGCAAT+TGG | + | chr1_1:79274793-79274812 | None:intergenic | 35.0% | |
| ATTGCTTTACGCTCTATTGT+CGG | - | chr1_1:79274793-79274812 | Msa0046850:CDS | 35.0% | |
| ! | CTGGTTTGTAACTCAAATAC+TGG | - | chr1_1:79274837-79274856 | Msa0046850:CDS | 35.0% |
| CAATAGAACAGATAAAGTGC+TGG | - | chr1_1:79274909-79274928 | Msa0046850:intron | 35.0% | |
| CAAAATCATGTCTAGACCAT+AGG | + | chr1_1:79274960-79274979 | None:intergenic | 35.0% | |
| ATTCCGTGACAATATTGTTC+TGG | - | chr1_1:79275050-79275069 | Msa0046850:CDS | 35.0% | |
| TGAAAACAGTTTACCCCTTA+TGG | - | chr1_1:79275233-79275252 | Msa0046850:intron | 35.0% | |
| TCACTGTCAAAACACCATAA+GGG | + | chr1_1:79275250-79275269 | None:intergenic | 35.0% | |
| ATCACTGTCAAAACACCATA+AGG | + | chr1_1:79275251-79275270 | None:intergenic | 35.0% | |
| !! | GTGATGTTTGTTGATTTCTG+TGG | - | chr1_1:79275266-79275285 | Msa0046850:intron | 35.0% |
| AAGGACTCATTAGTGAAAAC+TGG | + | chr1_1:79275305-79275324 | None:intergenic | 35.0% | |
| ACTGTTAAAACTATTTCCGG+CGG | - | chr1_1:79275544-79275563 | Msa0046850:intron | 35.0% | |
| ! | AGGTCAATTAAAAGGTGTAC+TGG | + | chr1_1:79275682-79275701 | None:intergenic | 35.0% |
| ! | AGCTTTTGTCCACTTTCATA+AGG | - | chr1_1:79275889-79275908 | Msa0046850:intron | 35.0% |
| TCCACTTTCATAAGGAATCA+GGG | - | chr1_1:79275897-79275916 | Msa0046850:intron | 35.0% | |
| ATCAGAACCAATTTCAGATC+TGG | + | chr1_1:79276197-79276216 | None:intergenic | 35.0% | |
| ! | AAAGTACTTGGGATTACGAA+AGG | - | chr1_1:79276343-79276362 | Msa0046850:intron | 35.0% |
| GATTACGAAAGGAATTCTCT+TGG | - | chr1_1:79276354-79276373 | Msa0046850:intron | 35.0% | |
| TCTTGATTTAAAAGGGGAAC+TGG | + | chr1_1:79276386-79276405 | None:intergenic | 35.0% | |
| ! | GTTCCCCTTTTAAATCAAGA+AGG | - | chr1_1:79276386-79276405 | Msa0046850:intron | 35.0% |
| AGCCCTTCTTGATTTAAAAG+GGG | + | chr1_1:79276392-79276411 | None:intergenic | 35.0% | |
| GAAGCCCTTCTTGATTTAAA+AGG | + | chr1_1:79276394-79276413 | None:intergenic | 35.0% | |
| !! | GGCAAAAGTTTCTGAAATCT+TGG | + | chr1_1:79276439-79276458 | None:intergenic | 35.0% |
| GAGAAAAAAGTCAATACGGA+TGG | - | chr1_1:79276493-79276512 | Msa0046850:intron | 35.0% | |
| GTGCTAAAGAAGTTACTACA+GGG | + | chr1_1:79276546-79276565 | None:intergenic | 35.0% | |
| AGTGCTAAAGAAGTTACTAC+AGG | + | chr1_1:79276547-79276566 | None:intergenic | 35.0% | |
| AATGAACTCACAATCCCTAA+AGG | + | chr1_1:79276712-79276731 | None:intergenic | 35.0% | |
| TCAAAATGGGAAGAACCAAA+TGG | - | chr1_1:79276838-79276857 | Msa0046850:intron | 35.0% | |
| ! | TATACACCTTTTGCTCCATT+TGG | + | chr1_1:79276856-79276875 | None:intergenic | 35.0% |
| AAGTCATGCTTTAACAACGT+AGG | + | chr1_1:79276990-79277009 | None:intergenic | 35.0% | |
| ATCTTAAAATTTATGCCCCC+AGG | + | chr1_1:79277147-79277166 | None:intergenic | 35.0% | |
| TATTTGACTGTGTAGGTTGT+TGG | - | chr1_1:79277316-79277335 | Msa0046850:intron | 35.0% | |
| !! | TACAGTTCTGGAGTGTATAA+AGG | + | chr1_1:79277656-79277675 | None:intergenic | 35.0% |
| TATACACTCCAGAACTGTAA+TGG | - | chr1_1:79277657-79277676 | Msa0046850:intron | 35.0% | |
| ! | AAAAGTGTACTTGCTTGACA+AGG | + | chr1_1:79278042-79278061 | None:intergenic | 35.0% |
| AGATACACATAGTTGCTAAC+AGG | + | chr1_1:79278071-79278090 | None:intergenic | 35.0% | |
| ! | GTTTTCCATCTAATCTGTTC+AGG | - | chr1_1:79278340-79278359 | Msa0046850:intron | 35.0% |
| GAAATGACCTATATTACAGG+GGG | + | chr1_1:79278848-79278867 | None:intergenic | 35.0% | |
| GGAAATGACCTATATTACAG+GGG | + | chr1_1:79278847-79278866 | None:intergenic | 35.0% | |
| CGGAAATGACCTATATTACA+GGG | + | chr1_1:79278846-79278865 | None:intergenic | 35.0% | |
| CCTGTAATATAGGTCATTTC+CGG | - | chr1_1:79278565-79278584 | Msa0046850:intron | 35.0% | |
| ! | AAGGGTGAAATTTTTCGTGA+AGG | + | chr1_1:79278658-79278677 | None:intergenic | 35.0% |
| AAAATTGAAGATATGGCAGG+GGG | + | chr1_1:79278737-79278756 | None:intergenic | 35.0% | |
| CAAAATTGAAGATATGGCAG+GGG | + | chr1_1:79278738-79278757 | None:intergenic | 35.0% | |
| ! | TATTTTACAGGGGGTAAAAC+CGG | - | chr1_1:79278826-79278845 | Msa0046850:CDS | 35.0% |
| CCTGTAATATAGGTCATTTC+CGG | + | chr1_1:79278565-79278584 | None:intergenic | 35.0% | |
| CGGAAATGACCTATATTACA+GGG | - | chr1_1:79278846-79278865 | Msa0046850:CDS | 35.0% | |
| GGAAATGACCTATATTACAG+GGG | - | chr1_1:79278847-79278866 | Msa0046850:CDS | 35.0% | |
| GAAATGACCTATATTACAGG+GGG | - | chr1_1:79278848-79278867 | Msa0046850:CDS | 35.0% | |
| ! | TGTTTTACCCCCTGTAATAT+AGG | + | chr1_1:79278858-79278877 | None:intergenic | 35.0% |
| GCAAAATCATTTCAGGGTTT+AGG | + | chr1_1:79278994-79279013 | None:intergenic | 35.0% | |
| ! | AAACCCTGAAATGATTTTGC+AGG | - | chr1_1:79278994-79279013 | Msa0046850:CDS | 35.0% |
| GAACCTGCAAAATCATTTCA+GGG | + | chr1_1:79279000-79279019 | None:intergenic | 35.0% | |
| TGAACCTGCAAAATCATTTC+AGG | + | chr1_1:79279001-79279020 | None:intergenic | 35.0% | |
| ! | TGAAATGATTTTGCAGGTTC+AGG | - | chr1_1:79279000-79279019 | Msa0046850:CDS | 35.0% |
| ! | ATTTGCTTTACTAGCTTGTC+AGG | - | chr1_1:79279273-79279292 | Msa0046850:CDS | 35.0% |
| AGAAGAAGAAAGACATCTCG+TGG | + | chr1_1:79271217-79271236 | None:intergenic | 40.0% | |
| AAGAACTTCGAAGCCATCAT+CGG | + | chr1_1:79271365-79271384 | None:intergenic | 40.0% | |
| ! | AAAACCTTTTGTTGATCGGG+AGG | + | chr1_1:79271418-79271437 | None:intergenic | 40.0% |
| TGATTTCTTGAAATCCGACG+AGG | - | chr1_1:79271622-79271641 | Msa0046850:intron | 40.0% | |
| AAATAAAACCTGCAAGAGCC+TGG | + | chr1_1:79271654-79271673 | None:intergenic | 40.0% | |
| CGAAGATACTCAGCAATTTG+AGG | - | chr1_1:79271792-79271811 | Msa0046850:intron | 40.0% | |
| CATTGTGTAAATCTACGGCA+TGG | - | chr1_1:79272094-79272113 | Msa0046850:intron | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | - | chr1_1:79272680-79272699 | Msa0046850:intron | 40.0% | |
| ! | AAGCCTTATCACACTAAGTG+GGG | + | chr1_1:79272972-79272991 | None:intergenic | 40.0% |
| ! | CAAGCCTTATCACACTAAGT+GGG | + | chr1_1:79272973-79272992 | None:intergenic | 40.0% |
| TGCTCGAAATACTGTTCATG+TGG | - | chr1_1:79273083-79273102 | Msa0046850:intron | 40.0% | |
| ! | CACTGGCTAACAACTCTATA+AGG | - | chr1_1:79273766-79273785 | Msa0046850:CDS | 40.0% |
| !!! | TGAGTTGGTGTTTTTCATGG+GGG | + | chr1_1:79273878-79273897 | None:intergenic | 40.0% |
| !!! | GTGAGTTGGTGTTTTTCATG+GGG | + | chr1_1:79273879-79273898 | None:intergenic | 40.0% |
| !!! | GGTGAGTTGGTGTTTTTCAT+GGG | + | chr1_1:79273880-79273899 | None:intergenic | 40.0% |
| !!! | AGGTGAGTTGGTGTTTTTCA+TGG | + | chr1_1:79273881-79273900 | None:intergenic | 40.0% |
| TAAAGAGTCTCAGAAGGAAG+TGG | + | chr1_1:79274034-79274053 | None:intergenic | 40.0% | |
| !! | CTTCCTTCTGAGACTCTTTA+TGG | - | chr1_1:79274034-79274053 | Msa0046850:CDS | 40.0% |
| AGACTCTTTATGGAGCTTCA+AGG | - | chr1_1:79274044-79274063 | Msa0046850:CDS | 40.0% | |
| GACTCTTTATGGAGCTTCAA+GGG | - | chr1_1:79274045-79274064 | Msa0046850:CDS | 40.0% | |
| TGAGATCAGAAATGTGGGTT+TGG | - | chr1_1:79274151-79274170 | Msa0046850:CDS | 40.0% | |
| TAAGGAAGTCAGGCAAATAG+TGG | + | chr1_1:79274521-79274540 | None:intergenic | 40.0% | |
| ! | GCCTGACTTCCTTAATTTTC+TGG | - | chr1_1:79274527-79274546 | Msa0046850:CDS | 40.0% |
| ! | TGCTGCTGATGCATTTTACA+CGG | - | chr1_1:79274654-79274673 | Msa0046850:intron | 40.0% |
| GGAATAGTCAGTTTGACAGT+TGG | + | chr1_1:79274680-79274699 | None:intergenic | 40.0% | |
| TTGCTTTACGCTCTATTGTC+GGG | - | chr1_1:79274794-79274813 | Msa0046850:CDS | 40.0% | |
| ! | TTTTGGATATGAGTCACGTC+TGG | - | chr1_1:79274818-79274837 | Msa0046850:CDS | 40.0% |
| GTTCTGTATCCTTAGTTGCT+AGG | - | chr1_1:79274933-79274952 | Msa0046850:intron | 40.0% | |
| CACTGTCAAAACACCATAAG+GGG | + | chr1_1:79275249-79275268 | None:intergenic | 40.0% | |
| !! | TGTTGATTTCTGTGGGATGA+TGG | - | chr1_1:79275274-79275293 | Msa0046850:intron | 40.0% |
| ! | GTTGATTTCTGTGGGATGAT+GGG | - | chr1_1:79275275-79275294 | Msa0046850:intron | 40.0% |
| AAACATGGTCTGTAAAGTCC+AGG | + | chr1_1:79275456-79275475 | None:intergenic | 40.0% | |
| TGGACTTTACAGACCATGTT+TGG | - | chr1_1:79275455-79275474 | Msa0046850:intron | 40.0% | |
| CTGTTAAAACTATTTCCGGC+GGG | - | chr1_1:79275545-79275564 | Msa0046850:intron | 40.0% | |
| !! | GACGTTGATGATCTTACAGA+TGG | - | chr1_1:79275586-79275605 | Msa0046850:intron | 40.0% |
| TGTCGTAGATTGCTTCACAT+GGG | + | chr1_1:79275623-79275642 | None:intergenic | 40.0% | |
| TTGTCGTAGATTGCTTCACA+TGG | + | chr1_1:79275624-79275643 | None:intergenic | 40.0% | |
| GTTATTGCCATAGCGAAAGA+TGG | - | chr1_1:79275776-79275795 | Msa0046850:intron | 40.0% | |
| ATGTCACCAAACGATACACA+AGG | - | chr1_1:79275807-79275826 | Msa0046850:CDS | 40.0% | |
| GTCCACTTTCATAAGGAATC+AGG | - | chr1_1:79275896-79275915 | Msa0046850:intron | 40.0% | |
| ACCCTGATTCCTTATGAAAG+TGG | + | chr1_1:79275901-79275920 | None:intergenic | 40.0% | |
| TAAGCATAGTACGTCGAGAA+AGG | + | chr1_1:79275979-79275998 | None:intergenic | 40.0% | |
| TGTAAAGCCTCTTCGACATT+CGG | + | chr1_1:79276041-79276060 | None:intergenic | 40.0% | |
| AAGAAAACCAGCAACTTGAG+AGG | - | chr1_1:79276098-79276117 | Msa0046850:intron | 40.0% | |
| AGAAAACCAGCAACTTGAGA+GGG | - | chr1_1:79276099-79276118 | Msa0046850:intron | 40.0% | |
| CGTCTACACACAATCGAATT+GGG | + | chr1_1:79276240-79276259 | None:intergenic | 40.0% | |
| TCGTCTACACACAATCGAAT+TGG | + | chr1_1:79276241-79276260 | None:intergenic | 40.0% | |
| GTTGCTAAGAACTGAATCGA+TGG | + | chr1_1:79276416-79276435 | None:intergenic | 40.0% | |
| AAAAAGTCAATACGGATGGG+AGG | - | chr1_1:79276497-79276516 | Msa0046850:intron | 40.0% | |
| AAAAGTCAATACGGATGGGA+GGG | - | chr1_1:79276498-79276517 | Msa0046850:intron | 40.0% | |
| ! | ATCTAGAGCATCTAGCACAA+CGG | + | chr1_1:79276572-79276591 | None:intergenic | 40.0% |
| CAGGTAACATCAGCATTTGA+TGG | - | chr1_1:79276805-79276824 | Msa0046850:intron | 40.0% | |
| GAAGAACCAAATGGAGCAAA+AGG | - | chr1_1:79276847-79276866 | Msa0046850:intron | 40.0% | |
| GAAAACAGAGCATAACTCCT+AGG | + | chr1_1:79277115-79277134 | None:intergenic | 40.0% | |
| ! | TCTGTTTTCATTCTCTGTCC+TGG | - | chr1_1:79277126-79277145 | Msa0046850:intron | 40.0% |
| ! | CTGTTTTCATTCTCTGTCCT+GGG | - | chr1_1:79277127-79277146 | Msa0046850:intron | 40.0% |
| ! | TGTTTTCATTCTCTGTCCTG+GGG | - | chr1_1:79277128-79277147 | Msa0046850:intron | 40.0% |
| TGACAAGAAGTTTGAGCTTG+TGG | - | chr1_1:79277359-79277378 | Msa0046850:intron | 40.0% | |
| TAAAGTCCATACCAGTCCAT+CGG | + | chr1_1:79277426-79277445 | None:intergenic | 40.0% | |
| AGATAGGTCCATTACAGTTC+TGG | + | chr1_1:79277668-79277687 | None:intergenic | 40.0% | |
| ATTGAGAGGATCTTTACTCG+TGG | - | chr1_1:79277701-79277720 | Msa0046850:intron | 40.0% | |
| GGTGGCACAGTATAGTTTAT+TGG | - | chr1_1:79277951-79277970 | Msa0046850:intron | 40.0% | |
| ! | TTCTTTGGTGACTGGTATGT+TGG | - | chr1_1:79278117-79278136 | Msa0046850:intron | 40.0% |
| TTGCTTCCTTCAAGAATCCT+GGG | + | chr1_1:79278225-79278244 | None:intergenic | 40.0% | |
| ATTGCTTCCTTCAAGAATCC+TGG | + | chr1_1:79278226-79278245 | None:intergenic | 40.0% | |
| TCTTGAAGGAAGCAATGATG+AGG | - | chr1_1:79278230-79278249 | Msa0046850:intron | 40.0% | |
| CTTGAAGGAAGCAATGATGA+GGG | - | chr1_1:79278231-79278250 | Msa0046850:intron | 40.0% | |
| TTGAAGGAAGCAATGATGAG+GGG | - | chr1_1:79278232-79278251 | Msa0046850:intron | 40.0% | |
| ! | ACGGTCTTTAAAGAACTGAG+AGG | + | chr1_1:79278286-79278305 | None:intergenic | 40.0% |
| TGCTTTACCCCCTGTAATAT+AGG | - | chr1_1:79278555-79278574 | Msa0046850:intron | 40.0% | |
| CCGGAAATGACCTATATTAC+AGG | + | chr1_1:79278845-79278864 | None:intergenic | 40.0% | |
| ! | TATTTTACAGGGGGGAAAAC+CGG | + | chr1_1:79278587-79278606 | None:intergenic | 40.0% |
| CCGGAAATGACCTATATTAC+AGG | - | chr1_1:79278845-79278864 | Msa0046850:CDS | 40.0% | |
| !! | TGTTTAGAGTGTCGGTATCT+TGG | - | chr1_1:79278898-79278917 | Msa0046850:intron | 40.0% |
| !! | ATTTTGCAGGTTCAGGTTTC+TGG | - | chr1_1:79279007-79279026 | Msa0046850:CDS | 40.0% |
| AAGACAATCAGTCTACTTCC+CGG | - | chr1_1:79279036-79279055 | Msa0046850:CDS | 40.0% | |
| AATACTACCAATTTGCAGCC+GGG | + | chr1_1:79279057-79279076 | None:intergenic | 40.0% | |
| CAATACTACCAATTTGCAGC+CGG | + | chr1_1:79279058-79279077 | None:intergenic | 40.0% | |
| !!! | GATGCTTCCTTTTAAGGTAC+TGG | + | chr1_1:79279199-79279218 | None:intergenic | 40.0% |
| ! | CAAGGTGATGCTTCCTTTTA+AGG | + | chr1_1:79279205-79279224 | None:intergenic | 40.0% |
| ATCTCGTGGAATAGAGTACG+TGG | + | chr1_1:79271203-79271222 | None:intergenic | 45.0% | |
| TGGAGTCGTTGTGAACAACT+TGG | + | chr1_1:79271321-79271340 | None:intergenic | 45.0% | |
| CTCGAATACGATACCGATGA+TGG | - | chr1_1:79271349-79271368 | Msa0046850:three_prime_UTR | 45.0% | |
| CAGAAGTGAGAGAGTAAAGC+TGG | + | chr1_1:79271393-79271412 | None:intergenic | 45.0% | |
| TGTTCCTCCCGATCAACAAA+AGG | - | chr1_1:79271411-79271430 | Msa0046850:three_prime_UTR | 45.0% | |
| CTTGAAATCCGACGAGGAAT+TGG | - | chr1_1:79271628-79271647 | Msa0046850:intron | 45.0% | |
| ATGAGGACTTGGGCAACATA+AGG | + | chr1_1:79271829-79271848 | None:intergenic | 45.0% | |
| TTATGTTGCCCAAGTCCTCA+TGG | - | chr1_1:79271828-79271847 | Msa0046850:intron | 45.0% | |
| !! | GCGAAAGAGTGTTGCTAGAA+AGG | - | chr1_1:79271994-79272013 | Msa0046850:intron | 45.0% |
| ! | CTGGTTATTTCCGTCTTCAG+TGG | - | chr1_1:79272056-79272075 | Msa0046850:intron | 45.0% |
| TCCGTCTTCAGTGGAAATCA+TGG | - | chr1_1:79272065-79272084 | Msa0046850:intron | 45.0% | |
| CCCATGATTTCCACTGAAGA+CGG | + | chr1_1:79272069-79272088 | None:intergenic | 45.0% | |
| CCGTCTTCAGTGGAAATCAT+GGG | - | chr1_1:79272066-79272085 | Msa0046850:intron | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | + | chr1_1:79272630-79272649 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | - | chr1_1:79272633-79272652 | Msa0046850:intron | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | - | chr1_1:79272824-79272843 | Msa0046850:intron | 45.0% | |
| GAGTCAGGTTAAAGAGGTAG+AGG | - | chr1_1:79272839-79272858 | Msa0046850:intron | 45.0% | |
| CTTATCACACTAAGTGGGGT+CGG | + | chr1_1:79272968-79272987 | None:intergenic | 45.0% | |
| ! | CCAAGCCTTATCACACTAAG+TGG | + | chr1_1:79272974-79272993 | None:intergenic | 45.0% |
| CCACTTAGTGTGATAAGGCT+TGG | - | chr1_1:79272971-79272990 | Msa0046850:intron | 45.0% | |
| TGTTCATGTGGAAGAGCTTG+AGG | - | chr1_1:79273095-79273114 | Msa0046850:intron | 45.0% | |
| TAGAGAGTCACACGCAGAAA+GGG | + | chr1_1:79273499-79273518 | None:intergenic | 45.0% | |
| ATAGAGAGTCACACGCAGAA+AGG | + | chr1_1:79273500-79273519 | None:intergenic | 45.0% | |
| TCTGCGTGTGACTCTCTATT+AGG | - | chr1_1:79273501-79273520 | Msa0046850:intron | 45.0% | |
| GTGTGACTCTCTATTAGGCT+TGG | - | chr1_1:79273506-79273525 | Msa0046850:intron | 45.0% | |
| ! | TCTGGTTCAAACGATCCTTC+AGG | - | chr1_1:79273680-79273699 | Msa0046850:intron | 45.0% |
| GTGCGTAAGTATAGGTGAGT+TGG | + | chr1_1:79273893-79273912 | None:intergenic | 45.0% | |
| AAGTGGAGCAGTCATACCTT+GGG | + | chr1_1:79274017-79274036 | None:intergenic | 45.0% | |
| GCTCCATAAAGAGTCTCAGA+AGG | + | chr1_1:79274040-79274059 | None:intergenic | 45.0% | |
| CAGCTTGTGGAAACAAGAGA+GGG | - | chr1_1:79274750-79274769 | Msa0046850:intron | 45.0% | |
| TCCTTAGTTGCTAGGACCTA+TGG | - | chr1_1:79274941-79274960 | Msa0046850:intron | 45.0% | |
| ACCATAGGTCCTAGCAACTA+AGG | + | chr1_1:79274945-79274964 | None:intergenic | 45.0% | |
| TTTAGTCGATCTCCAGATCC+TGG | - | chr1_1:79275435-79275454 | Msa0046850:intron | 45.0% | |
| AGTAGCACTCTGTCCAAACA+TGG | + | chr1_1:79275471-79275490 | None:intergenic | 45.0% | |
| ! | AGAGTGCTACTCTCAATTCC+TGG | - | chr1_1:79275480-79275499 | Msa0046850:intron | 45.0% |
| ! | GAGTGCTACTCTCAATTCCT+GGG | - | chr1_1:79275481-79275500 | Msa0046850:intron | 45.0% |
| TGTGTCAATTGTACCTTCCC+AGG | + | chr1_1:79275501-79275520 | None:intergenic | 45.0% | |
| ACGAGTTCCATCTTTCGCTA+TGG | + | chr1_1:79275786-79275805 | None:intergenic | 45.0% | |
| CCACTTCCTTGTGTATCGTT+TGG | + | chr1_1:79275816-79275835 | None:intergenic | 45.0% | |
| CCAAACGATACACAAGGAAG+TGG | - | chr1_1:79275813-79275832 | Msa0046850:CDS | 45.0% | |
| AGGAATCAGGGTTCCTGAAT+TGG | - | chr1_1:79275909-79275928 | Msa0046850:intron | 45.0% | |
| GTGAGTACAGATGACACAGA+AGG | + | chr1_1:79276007-79276026 | None:intergenic | 45.0% | |
| ATAACCACCGAATGTCGAAG+AGG | - | chr1_1:79276031-79276050 | Msa0046850:intron | 45.0% | |
| GAAAACCAGCAACTTGAGAG+GGG | - | chr1_1:79276100-79276119 | Msa0046850:intron | 45.0% | |
| TCTTCTTCCAGGTAACGAGA+GGG | + | chr1_1:79276149-79276168 | None:intergenic | 45.0% | |
| TTCTTCTTCCAGGTAACGAG+AGG | + | chr1_1:79276150-79276169 | None:intergenic | 45.0% | |
| TCGTTACCTGGAAGAAGAAG+TGG | - | chr1_1:79276151-79276170 | Msa0046850:intron | 45.0% | |
| CGTTACCTGGAAGAAGAAGT+GGG | - | chr1_1:79276152-79276171 | Msa0046850:intron | 45.0% | |
| TCATTCCCACTTCTTCTTCC+AGG | + | chr1_1:79276160-79276179 | None:intergenic | 45.0% | |
| GAAGAAGTGGGAATGAGCAA+TGG | - | chr1_1:79276164-79276183 | Msa0046850:intron | 45.0% | |
| ! | TCCGAAGCTGTCAAAGTACT+TGG | - | chr1_1:79276331-79276350 | Msa0046850:intron | 45.0% |
| CCCAAGTACTTTGACAGCTT+CGG | + | chr1_1:79276335-79276354 | None:intergenic | 45.0% | |
| ! | CCGAAGCTGTCAAAGTACTT+GGG | - | chr1_1:79276332-79276351 | Msa0046850:intron | 45.0% |
| ! | TGGGAGGGTTGAAGTTTGTT+CGG | - | chr1_1:79276513-79276532 | Msa0046850:intron | 45.0% |
| ! | AGGGTTGAAGTTTGTTCGGT+TGG | - | chr1_1:79276517-79276536 | Msa0046850:intron | 45.0% |
| ! | TCTAGAGCATCTAGCACAAC+GGG | + | chr1_1:79276571-79276590 | None:intergenic | 45.0% |
| ! | GCTAGATGCTCTAGATGACA+TGG | - | chr1_1:79276576-79276595 | Msa0046850:CDS | 45.0% |
| AGCACTTGAAACGACTGAAC+CGG | + | chr1_1:79276680-79276699 | None:intergenic | 45.0% | |
| ! | TTCAGTCGTTTCAAGTGCTG+AGG | - | chr1_1:79276681-79276700 | Msa0046850:intron | 45.0% |
| ! | GTTTTCATTCTCTGTCCTGG+GGG | - | chr1_1:79277129-79277148 | Msa0046850:intron | 45.0% |
| TGTACTTGCTTGACAAGGCT+GGG | + | chr1_1:79278037-79278056 | None:intergenic | 45.0% | |
| CCTTCAAGAATCCTGGGAAA+AGG | + | chr1_1:79278219-79278238 | None:intergenic | 45.0% | |
| ! | CCTTTTCCCAGGATTCTTGA+AGG | - | chr1_1:79278216-79278235 | Msa0046850:intron | 45.0% |
| ! | ACTAGCTTGTCAGGTAATGC+TGG | - | chr1_1:79279282-79279301 | Msa0046850:CDS | 45.0% |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | - | chr1_1:79272641-79272660 | Msa0046850:intron | 50.0% |
| AGGATGTTGCGTTGGATGAG+TGG | - | chr1_1:79272661-79272680 | Msa0046850:intron | 50.0% | |
| GGAGGAGAGTCAGGTTAAAG+AGG | - | chr1_1:79272833-79272852 | Msa0046850:intron | 50.0% | |
| CGACCCCACTTAGTGTGATA+AGG | - | chr1_1:79272966-79272985 | Msa0046850:intron | 50.0% | |
| !! | GTATGAAGATGAAAGGCGCC+AGG | - | chr1_1:79273056-79273075 | Msa0046850:intron | 50.0% |
| TGTCAGACACACCTTCAACC+TGG | - | chr1_1:79273446-79273465 | Msa0046850:intron | 50.0% | |
| ACACCTTCAACCTGGAGTGT+CGG | - | chr1_1:79273454-79273473 | Msa0046850:intron | 50.0% | |
| !!! | TCCTGCTACAGCTGCTTTTC+TGG | - | chr1_1:79273662-79273681 | Msa0046850:intron | 50.0% |
| ACCAGAAAAGCAGCTGTAGC+AGG | + | chr1_1:79273666-79273685 | None:intergenic | 50.0% | |
| TTGCCACAATCACGACAAGG+TGG | + | chr1_1:79273983-79274002 | None:intergenic | 50.0% | |
| TCGTTGCCACAATCACGACA+AGG | + | chr1_1:79273986-79274005 | None:intergenic | 50.0% | |
| GAAGTGGAGCAGTCATACCT+TGG | + | chr1_1:79274018-79274037 | None:intergenic | 50.0% | |
| ! | GCGAGTCAGTTTGGAGCAAA+CGG | + | chr1_1:79274587-79274606 | None:intergenic | 50.0% |
| GCAGCTTGTGGAAACAAGAG+AGG | - | chr1_1:79274749-79274768 | Msa0046850:intron | 50.0% | |
| AATTGGCCCATTCTCCACAG+CGG | + | chr1_1:79274776-79274795 | None:intergenic | 50.0% | |
| ! | ACGCTCTATTGTCGGGCTTT+TGG | - | chr1_1:79274801-79274820 | Msa0046850:CDS | 50.0% |
| !! | GATTTCTGTGGGATGATGGG+TGG | - | chr1_1:79275278-79275297 | Msa0046850:intron | 50.0% |
| GGTCTGTAAAGTCCAGGATC+TGG | + | chr1_1:79275450-79275469 | None:intergenic | 50.0% | |
| GCTACTCTCAATTCCTGGGA+AGG | - | chr1_1:79275485-79275504 | Msa0046850:intron | 50.0% | |
| AGAACAAAACACTGTCCCGC+CGG | + | chr1_1:79275563-79275582 | None:intergenic | 50.0% | |
| ATACACAAGGAAGTGGCACG+AGG | - | chr1_1:79275820-79275839 | Msa0046850:CDS | 50.0% | |
| AAAGCCTCTTCGACATTCGG+TGG | + | chr1_1:79276038-79276057 | None:intergenic | 50.0% | |
| ! | AGTGCTGAGGAGTTGCCTTT+AGG | - | chr1_1:79276694-79276713 | Msa0046850:intron | 50.0% |
| GTGCTGAGGAGTTGCCTTTA+GGG | - | chr1_1:79276695-79276714 | Msa0046850:intron | 50.0% | |
| TGCCAATGATGCCCCAGAAA+GGG | - | chr1_1:79277398-79277417 | Msa0046850:intron | 50.0% | |
| !! | ATCCCTTTCTGGGGCATCAT+TGG | + | chr1_1:79277403-79277422 | None:intergenic | 50.0% |
| AGTCCATCGGATCCCTTTCT+GGG | + | chr1_1:79277413-79277432 | None:intergenic | 50.0% | |
| GTGTACTTGCTTGACAAGGC+TGG | + | chr1_1:79278038-79278057 | None:intergenic | 50.0% | |
| ! | GCAATGATGAGGGGACTAGT+TGG | - | chr1_1:79278241-79278260 | Msa0046850:intron | 50.0% |
| !!! | GGGGACTAGTTGGCAAGTTT+TGG | - | chr1_1:79278251-79278270 | Msa0046850:intron | 50.0% |
| TCTACTTCCCGGCTGCAAAT+TGG | - | chr1_1:79279047-79279066 | Msa0046850:CDS | 50.0% | |
| AATCCGACGAGGAATTGGCC+AGG | - | chr1_1:79271633-79271652 | Msa0046850:intron | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | - | chr1_1:79272653-79272672 | Msa0046850:intron | 55.0% | |
| CTTCTTACCACGGCGTCTAC+TGG | + | chr1_1:79272801-79272820 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr1_1:79272960-79272979 | None:intergenic | 55.0% | |
| !! | TGAAGATGAAAGGCGCCAGG+AGG | - | chr1_1:79273059-79273078 | Msa0046850:intron | 55.0% |
| CAGTATTTCGAGCAGCCTCC+TGG | + | chr1_1:79273077-79273096 | None:intergenic | 55.0% | |
| !! | TACACAAGCACCGACACTCC+AGG | + | chr1_1:79273467-79273486 | None:intergenic | 55.0% |
| !! | GGAGTGTCGGTGCTTGTGTA+TGG | - | chr1_1:79273467-79273486 | Msa0046850:intron | 55.0% |
| GCACCACCTTGTCGTGATTG+TGG | - | chr1_1:79273977-79273996 | Msa0046850:CDS | 55.0% | |
| CAAACGGTGCAGCTGTCATG+TGG | + | chr1_1:79274571-79274590 | None:intergenic | 55.0% | |
| !! | CCAAACTGACTCGCTTCCCT+CGG | - | chr1_1:79274593-79274612 | Msa0046850:CDS | 55.0% |
| ACAAGGAAGTGGCACGAGGT+AGG | - | chr1_1:79275824-79275843 | Msa0046850:CDS | 55.0% | |
| ! | GCAAACCCCTCTCAAGTTGC+TGG | + | chr1_1:79276108-79276127 | None:intergenic | 55.0% |
| CTGCCAATGATGCCCCAGAA+AGG | - | chr1_1:79277397-79277416 | Msa0046850:intron | 55.0% | |
| GTCCATCGGATCCCTTTCTG+GGG | + | chr1_1:79277412-79277431 | None:intergenic | 55.0% | |
| CAGTCCATCGGATCCCTTTC+TGG | + | chr1_1:79277414-79277433 | None:intergenic | 55.0% | |
| CAGAAAGGGATCCGATGGAC+TGG | - | chr1_1:79277412-79277431 | Msa0046850:intron | 55.0% | |
| !! | AGGGATCCGATGGACTGGTA+TGG | - | chr1_1:79277417-79277436 | Msa0046850:intron | 55.0% |
| GAGCCTGGCCAATTCCTCGT+CGG | + | chr1_1:79271639-79271658 | None:intergenic | 60.0% | |
| GGAATTGGCCAGGCTCTTGC+AGG | - | chr1_1:79271643-79271662 | Msa0046850:intron | 60.0% | |
| GAGAAGACCAGTAGACGCCG+TGG | - | chr1_1:79272791-79272810 | Msa0046850:intron | 60.0% | |
| ! | GCACCGACACTCCAGGTTGA+AGG | + | chr1_1:79273460-79273479 | None:intergenic | 60.0% |
| GGCAACGACACTGTAGCCCA+AGG | - | chr1_1:79273998-79274017 | Msa0046850:CDS | 60.0% | |
| CCGAGGGAAGCGAGTCAGTT+TGG | + | chr1_1:79274596-79274615 | None:intergenic | 60.0% | |
| GAAACAAGAGAGGGCCGCTG+TGG | - | chr1_1:79274759-79274778 | Msa0046850:intron | 60.0% | |
| AGAGGGCCGCTGTGGAGAAT+GGG | - | chr1_1:79274767-79274786 | Msa0046850:intron | 60.0% | |
| GACGAGTCCCTCTCGTTACC+TGG | - | chr1_1:79276139-79276158 | Msa0046850:intron | 60.0% | |
| TGCCCCAGAAAGGGATCCGA+TGG | - | chr1_1:79277407-79277426 | Msa0046850:intron | 60.0% | |
| GGGAAAAGGTCGTGCGTGCA+CGG | + | chr1_1:79278205-79278224 | None:intergenic | 60.0% | |
| ! | TGCACGCACGACCTTTTCCC+AGG | - | chr1_1:79278205-79278224 | Msa0046850:intron | 60.0% |
| GAGAGGGCCGCTGTGGAGAA+TGG | - | chr1_1:79274766-79274785 | Msa0046850:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 79271193 | 79279426 | 79271193 | ID=Msa0046850;Name=Msa0046850 |
| chr1_1 | mRNA | 79271193 | 79279426 | 79271193 | ID=Msa0046850-mRNA-1;Parent=Msa0046850;Name=Msa0046850-mRNA-1;_AED=0.21;_eAED=0.21;_QI=108|0.68|0.82|0.88|1|1|17|326|774 |
| chr1_1 | exon | 79271193 | 79271603 | 79271193 | ID=Msa0046850-mRNA-1:exon:27356;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79272258 | 79272392 | 79272258 | ID=Msa0046850-mRNA-1:exon:27355;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79273186 | 79273288 | 79273186 | ID=Msa0046850-mRNA-1:exon:27354;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79273751 | 79273811 | 79273751 | ID=Msa0046850-mRNA-1:exon:27353;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79273899 | 79274645 | 79273899 | ID=Msa0046850-mRNA-1:exon:27352;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79274778 | 79274865 | 79274778 | ID=Msa0046850-mRNA-1:exon:27351;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79275031 | 79275179 | 79275031 | ID=Msa0046850-mRNA-1:exon:27350;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79275780 | 79275866 | 79275780 | ID=Msa0046850-mRNA-1:exon:27349;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79275986 | 79276040 | 79275986 | ID=Msa0046850-mRNA-1:exon:27348;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79276539 | 79276652 | 79276539 | ID=Msa0046850-mRNA-1:exon:27347;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79276918 | 79277000 | 79276918 | ID=Msa0046850-mRNA-1:exon:27346;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79277476 | 79277562 | 79277476 | ID=Msa0046850-mRNA-1:exon:27345;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79277765 | 79277829 | 79277765 | ID=Msa0046850-mRNA-1:exon:27344;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79278471 | 79278543 | 79278471 | ID=Msa0046850-mRNA-1:exon:27343;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79278770 | 79278868 | 79278770 | ID=Msa0046850-mRNA-1:exon:27342;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79278955 | 79279116 | 79278955 | ID=Msa0046850-mRNA-1:exon:27341;Parent=Msa0046850-mRNA-1 |
| chr1_1 | exon | 79279187 | 79279426 | 79279187 | ID=Msa0046850-mRNA-1:exon:27340;Parent=Msa0046850-mRNA-1 |
| chr1_1 | five_prime_UTR | 79279319 | 79279426 | 79279319 | ID=Msa0046850-mRNA-1:five_prime_utr;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79279187 | 79279318 | 79279187 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79278955 | 79279116 | 79278955 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79278770 | 79278868 | 79278770 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79278471 | 79278543 | 79278471 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79277765 | 79277829 | 79277765 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79277476 | 79277562 | 79277476 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79276918 | 79277000 | 79276918 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79276539 | 79276652 | 79276539 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79275986 | 79276040 | 79275986 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79275780 | 79275866 | 79275780 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79275031 | 79275179 | 79275031 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79274778 | 79274865 | 79274778 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79273899 | 79274645 | 79273899 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79273751 | 79273811 | 79273751 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79273186 | 79273288 | 79273186 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79272258 | 79272392 | 79272258 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | CDS | 79271519 | 79271603 | 79271519 | ID=Msa0046850-mRNA-1:cds;Parent=Msa0046850-mRNA-1 |
| chr1_1 | three_prime_UTR | 79271193 | 79271518 | 79271193 | ID=Msa0046850-mRNA-1:three_prime_utr;Parent=Msa0046850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
