Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0048090 | XP_013454616.2 | 96.515 | 1033 | 22 | 1 | 1 | 1019 | 1 | 1033 | 0.0 | 2031 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0048090 | sp|Q9M2L4|ACA11_ARATH | 70.971 | 1030 | 276 | 5 | 1 | 1016 | 1 | 1021 | 0.0 | 1504 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0048090 | A0A396JS66 | 96.515 | 1033 | 22 | 1 | 1 | 1019 | 1 | 1033 | 0.0 | 2031 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0048090 | Msa0071420 | 0.939202 | 1.887584e-99 | -8.615850e-47 |
| Msa0048090 | Msa0119320 | 0.856987 | 2.217391e-62 | -8.615850e-47 |
| Msa0048090 | Msa0164460 | 0.918149 | 2.223836e-86 | -8.615850e-47 |
| Msa0048090 | Msa0286810 | 0.811832 | 5.747266e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0048090 | MtrunA17_Chr1g0173111 | 96.515 | 1033 | 22 | 1 | 1 | 1019 | 1 | 1033 | 0.0 | 2031 |
| Msa0048090 | MtrunA17_Chr8g0382071 | 76.893 | 1030 | 221 | 3 | 5 | 1017 | 6 | 1035 | 0.0 | 1643 |
| Msa0048090 | MtrunA17_Chr8g0355421 | 61.785 | 1031 | 371 | 5 | 1 | 1016 | 1 | 1023 | 0.0 | 1283 |
| Msa0048090 | MtrunA17_Chr5g0401211 | 63.386 | 1016 | 351 | 5 | 1 | 997 | 1 | 1014 | 0.0 | 1278 |
| Msa0048090 | MtrunA17_Chr3g0134771 | 61.750 | 1017 | 368 | 6 | 1 | 997 | 1 | 1016 | 0.0 | 1243 |
| Msa0048090 | MtrunA17_Chr4g0020551 | 67.423 | 881 | 268 | 5 | 71 | 946 | 5 | 871 | 0.0 | 1205 |
| Msa0048090 | MtrunA17_Chr4g0054021 | 63.276 | 934 | 322 | 4 | 81 | 997 | 8 | 937 | 0.0 | 1177 |
| Msa0048090 | MtrunA17_Chr2g0298871 | 48.038 | 1045 | 462 | 16 | 13 | 997 | 46 | 1069 | 0.0 | 873 |
| Msa0048090 | MtrunA17_Chr4g0002331 | 47.596 | 1040 | 484 | 15 | 11 | 1004 | 64 | 1088 | 0.0 | 865 |
| Msa0048090 | MtrunA17_Chr6g0456201 | 44.807 | 1011 | 498 | 16 | 37 | 997 | 6 | 1006 | 0.0 | 814 |
| Msa0048090 | MtrunA17_Chr7g0260401 | 43.725 | 1020 | 521 | 16 | 19 | 997 | 32 | 1039 | 0.0 | 753 |
| Msa0048090 | MtrunA17_Chr8g0340261 | 44.248 | 565 | 264 | 10 | 459 | 997 | 2 | 541 | 5.89e-146 | 447 |
| Msa0048090 | MtrunA17_Chr8g0340271 | 48.724 | 392 | 188 | 6 | 79 | 457 | 55 | 446 | 1.17e-110 | 352 |
| Msa0048090 | MtrunA17_Chr2g0334231 | 43.534 | 464 | 236 | 7 | 11 | 461 | 54 | 504 | 4.86e-105 | 338 |
| Msa0048090 | MtrunA17_Chr7g0263361 | 31.891 | 878 | 487 | 25 | 109 | 900 | 24 | 876 | 1.39e-100 | 340 |
| Msa0048090 | MtrunA17_Chr8g0346461 | 30.907 | 838 | 471 | 20 | 127 | 871 | 28 | 850 | 1.16e-93 | 321 |
| Msa0048090 | MtrunA17_Chr4g0005551 | 27.321 | 948 | 600 | 25 | 98 | 997 | 61 | 967 | 2.90e-84 | 293 |
| Msa0048090 | MtrunA17_Chr3g0134951 | 28.822 | 968 | 560 | 24 | 131 | 991 | 22 | 967 | 4.12e-84 | 293 |
| Msa0048090 | MtrunA17_Chr5g0447521 | 25.949 | 975 | 624 | 25 | 73 | 995 | 76 | 1004 | 4.38e-79 | 280 |
| Msa0048090 | MtrunA17_Chr2g0334221 | 47.423 | 291 | 137 | 6 | 486 | 762 | 43 | 331 | 6.65e-67 | 228 |
| Msa0048090 | MtrunA17_Chr4g0072131 | 25.627 | 718 | 433 | 21 | 131 | 826 | 36 | 674 | 9.89e-52 | 197 |
| Msa0048090 | MtrunA17_Chr2g0298031 | 25.210 | 714 | 442 | 19 | 131 | 826 | 38 | 677 | 1.15e-49 | 191 |
| Msa0048090 | MtrunA17_Chr2g0333721 | 25.612 | 695 | 440 | 20 | 131 | 819 | 31 | 654 | 7.66e-49 | 188 |
| Msa0048090 | MtrunA17_Chr8g0335291 | 26.068 | 702 | 433 | 21 | 131 | 819 | 35 | 663 | 1.51e-48 | 187 |
| Msa0048090 | MtrunA17_Chr8g0365021 | 25.989 | 708 | 443 | 21 | 131 | 826 | 103 | 741 | 3.31e-48 | 186 |
| Msa0048090 | MtrunA17_Chr4g0065481 | 25.702 | 712 | 440 | 19 | 131 | 826 | 34 | 672 | 8.00e-48 | 185 |
| Msa0048090 | MtrunA17_Chr3g0138931 | 25.211 | 710 | 444 | 19 | 132 | 826 | 34 | 671 | 1.35e-47 | 184 |
| Msa0048090 | MtrunA17_Chr1g0148031 | 24.754 | 711 | 448 | 19 | 131 | 826 | 33 | 671 | 3.11e-47 | 183 |
| Msa0048090 | MtrunA17_Chr1g0147981 | 24.544 | 713 | 447 | 18 | 131 | 826 | 50 | 688 | 8.74e-47 | 182 |
| Msa0048090 | MtrunA17_Chr8g0381711 | 25.321 | 778 | 479 | 26 | 115 | 857 | 14 | 724 | 1.49e-46 | 181 |
| Msa0048090 | MtrunA17_Chr2g0304941 | 24.579 | 712 | 448 | 18 | 131 | 826 | 34 | 672 | 2.76e-46 | 180 |
| Msa0048090 | MtrunA17_Chr4g0059961 | 25.000 | 700 | 438 | 22 | 131 | 819 | 37 | 660 | 2.38e-45 | 177 |
| Msa0048090 | MtrunA17_Chr6g0452721 | 24.536 | 701 | 438 | 22 | 132 | 819 | 36 | 658 | 7.88e-42 | 166 |
| Msa0048090 | MtrunA17_Chr2g0334201 | 45.029 | 171 | 79 | 1 | 849 | 1004 | 1 | 171 | 1.16e-40 | 148 |
| Msa0048090 | MtrunA17_Chr7g0276551 | 24.882 | 422 | 269 | 8 | 400 | 819 | 46 | 421 | 9.11e-32 | 133 |
| Msa0048090 | MtrunA17_Chr4g0020561 | 56.044 | 91 | 39 | 1 | 928 | 1017 | 1 | 91 | 3.11e-26 | 103 |
| Msa0048090 | MtrunA17_Chr0c05g0492131 | 24.164 | 538 | 238 | 17 | 389 | 775 | 362 | 880 | 2.32e-19 | 94.4 |
| Msa0048090 | MtrunA17_Chr3g0078371 | 23.725 | 510 | 255 | 14 | 389 | 775 | 436 | 934 | 1.33e-17 | 88.6 |
| Msa0048090 | MtrunA17_Chr8g0374391 | 30.899 | 178 | 94 | 3 | 645 | 822 | 35 | 183 | 1.89e-17 | 83.2 |
| Msa0048090 | MtrunA17_Chr8g0374331 | 30.899 | 178 | 94 | 3 | 645 | 822 | 42 | 190 | 2.44e-17 | 82.8 |
| Msa0048090 | MtrunA17_Chr2g0297051 | 32.584 | 178 | 91 | 5 | 645 | 822 | 821 | 969 | 1.96e-16 | 84.7 |
| Msa0048090 | MtrunA17_Chr2g0297051 | 25.773 | 291 | 201 | 7 | 173 | 457 | 410 | 691 | 5.95e-11 | 67.0 |
| Msa0048090 | MtrunA17_Chr2g0324791 | 23.214 | 560 | 313 | 20 | 440 | 902 | 370 | 909 | 9.29e-16 | 82.8 |
| Msa0048090 | MtrunA17_Chr4g0052521 | 31.461 | 178 | 93 | 5 | 645 | 822 | 789 | 937 | 1.15e-15 | 82.4 |
| Msa0048090 | MtrunA17_Chr8g0363911 | 23.467 | 375 | 187 | 10 | 546 | 833 | 577 | 938 | 2.96e-15 | 80.9 |
| Msa0048090 | MtrunA17_Chr8g0368691 | 24.784 | 464 | 238 | 17 | 487 | 857 | 541 | 986 | 5.15e-15 | 80.1 |
| Msa0048090 | MtrunA17_Chr5g0397621 | 31.429 | 175 | 91 | 4 | 648 | 822 | 696 | 841 | 9.86e-15 | 79.0 |
| Msa0048090 | MtrunA17_Chr4g0020541 | 58.621 | 58 | 23 | 1 | 1 | 57 | 1 | 58 | 1.76e-14 | 69.3 |
| Msa0048090 | MtrunA17_Chr8g0339181 | 32.558 | 172 | 87 | 3 | 651 | 822 | 765 | 907 | 4.74e-14 | 77.0 |
| Msa0048090 | MtrunA17_Chr5g0415271 | 23.822 | 382 | 187 | 12 | 541 | 833 | 552 | 918 | 5.82e-13 | 73.6 |
| Msa0048090 | MtrunA17_Chr4g0071991 | 32.919 | 161 | 81 | 4 | 641 | 801 | 512 | 645 | 1.99e-12 | 71.6 |
| Msa0048090 | MtrunA17_Chr8g0342811 | 23.577 | 369 | 191 | 11 | 543 | 833 | 608 | 963 | 3.20e-12 | 71.2 |
| Msa0048090 | MtrunA17_Chr3g0091611 | 25.882 | 255 | 147 | 8 | 487 | 712 | 519 | 760 | 3.36e-12 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0048090 | AT3G57330.1 | 70.971 | 1030 | 276 | 5 | 1 | 1016 | 1 | 1021 | 0.0 | 1504 |
| Msa0048090 | AT2G41560.1 | 70.708 | 1031 | 280 | 6 | 1 | 1016 | 1 | 1024 | 0.0 | 1503 |
| Msa0048090 | AT3G57330.2 | 72.325 | 972 | 246 | 5 | 59 | 1016 | 4 | 966 | 0.0 | 1449 |
| Msa0048090 | AT2G41560.2 | 73.089 | 929 | 228 | 6 | 103 | 1016 | 1 | 922 | 0.0 | 1392 |
| Msa0048090 | AT2G41560.3 | 73.089 | 929 | 228 | 6 | 103 | 1016 | 1 | 922 | 0.0 | 1392 |
| Msa0048090 | AT2G41560.4 | 73.089 | 929 | 228 | 6 | 103 | 1016 | 1 | 922 | 0.0 | 1392 |
| Msa0048090 | AT4G37640.1 | 61.516 | 1016 | 370 | 6 | 1 | 997 | 1 | 1014 | 0.0 | 1245 |
| Msa0048090 | AT2G22950.1 | 61.652 | 1017 | 368 | 6 | 1 | 997 | 1 | 1015 | 0.0 | 1242 |
| Msa0048090 | AT1G27770.4 | 61.062 | 1017 | 376 | 5 | 1 | 997 | 1 | 1017 | 0.0 | 1238 |
| Msa0048090 | AT1G27770.1 | 61.062 | 1017 | 376 | 5 | 1 | 997 | 1 | 1017 | 0.0 | 1238 |
| Msa0048090 | AT1G27770.3 | 62.927 | 936 | 330 | 3 | 79 | 997 | 19 | 954 | 0.0 | 1182 |
| Msa0048090 | AT4G29900.1 | 48.887 | 1033 | 476 | 16 | 13 | 1005 | 37 | 1057 | 0.0 | 891 |
| Msa0048090 | AT4G29900.2 | 48.887 | 1033 | 476 | 16 | 13 | 1005 | 37 | 1057 | 0.0 | 891 |
| Msa0048090 | AT5G57110.1 | 47.919 | 1033 | 478 | 15 | 8 | 997 | 32 | 1047 | 0.0 | 875 |
| Msa0048090 | AT5G57110.3 | 47.919 | 1033 | 478 | 15 | 8 | 997 | 32 | 1047 | 0.0 | 875 |
| Msa0048090 | AT5G57110.2 | 47.919 | 1033 | 478 | 15 | 8 | 997 | 32 | 1047 | 0.0 | 875 |
| Msa0048090 | AT3G21180.1 | 46.525 | 1036 | 496 | 15 | 8 | 999 | 45 | 1066 | 0.0 | 860 |
| Msa0048090 | AT3G63380.1 | 44.209 | 993 | 512 | 19 | 34 | 997 | 27 | 1006 | 0.0 | 746 |
| Msa0048090 | AT3G22910.1 | 44.824 | 937 | 470 | 14 | 93 | 997 | 81 | 1002 | 0.0 | 717 |
| Msa0048090 | AT1G27770.2 | 54.401 | 693 | 309 | 5 | 1 | 687 | 1 | 692 | 0.0 | 712 |
| Msa0048090 | AT1G27770.2 | 66.990 | 309 | 88 | 1 | 703 | 997 | 635 | 943 | 8.86e-136 | 433 |
| Msa0048090 | AT5G53010.1 | 33.531 | 1011 | 553 | 26 | 35 | 985 | 82 | 1033 | 7.47e-135 | 433 |
| Msa0048090 | AT1G07670.2 | 32.126 | 856 | 493 | 20 | 101 | 880 | 16 | 859 | 3.37e-100 | 340 |
| Msa0048090 | AT1G07670.1 | 32.126 | 856 | 493 | 20 | 101 | 880 | 16 | 859 | 3.37e-100 | 340 |
| Msa0048090 | AT1G07810.1 | 32.084 | 854 | 490 | 23 | 104 | 880 | 19 | 859 | 4.66e-98 | 333 |
| Msa0048090 | AT5G53010.2 | 32.906 | 702 | 438 | 18 | 35 | 717 | 82 | 769 | 2.03e-93 | 315 |
| Msa0048090 | AT4G00900.2 | 31.829 | 842 | 477 | 22 | 118 | 871 | 14 | 846 | 6.06e-92 | 317 |
| Msa0048090 | AT4G00900.1 | 31.829 | 842 | 477 | 22 | 118 | 871 | 14 | 846 | 6.06e-92 | 317 |
| Msa0048090 | AT1G10130.1 | 29.332 | 958 | 558 | 25 | 131 | 984 | 22 | 964 | 1.55e-88 | 306 |
| Msa0048090 | AT1G80660.4 | 24.929 | 702 | 436 | 19 | 131 | 819 | 36 | 659 | 1.18e-52 | 200 |
| Msa0048090 | AT1G80660.3 | 24.929 | 702 | 436 | 19 | 131 | 819 | 36 | 659 | 1.19e-52 | 200 |
| Msa0048090 | AT1G80660.1 | 24.929 | 702 | 436 | 19 | 131 | 819 | 36 | 659 | 1.73e-52 | 200 |
| Msa0048090 | AT3G60330.4 | 25.000 | 704 | 453 | 19 | 131 | 831 | 34 | 665 | 3.05e-50 | 193 |
| Msa0048090 | AT3G60330.3 | 25.000 | 704 | 453 | 19 | 131 | 831 | 34 | 665 | 3.05e-50 | 193 |
| Msa0048090 | AT3G60330.2 | 24.858 | 704 | 454 | 19 | 131 | 831 | 34 | 665 | 5.95e-50 | 192 |
| Msa0048090 | AT3G60330.1 | 24.858 | 704 | 454 | 19 | 131 | 831 | 34 | 665 | 5.95e-50 | 192 |
| Msa0048090 | AT1G80660.2 | 25.126 | 593 | 362 | 15 | 237 | 819 | 10 | 530 | 4.25e-48 | 185 |
| Msa0048090 | AT2G07560.1 | 24.552 | 725 | 431 | 18 | 131 | 826 | 34 | 671 | 1.61e-47 | 184 |
| Msa0048090 | AT2G24520.3 | 24.332 | 711 | 451 | 19 | 131 | 826 | 13 | 651 | 1.65e-47 | 184 |
| Msa0048090 | AT2G24520.1 | 24.332 | 711 | 451 | 19 | 131 | 826 | 13 | 651 | 1.65e-47 | 184 |
| Msa0048090 | AT2G24520.2 | 24.613 | 711 | 449 | 20 | 131 | 826 | 76 | 714 | 1.70e-47 | 184 |
| Msa0048090 | AT5G57350.4 | 25.421 | 712 | 442 | 23 | 131 | 826 | 32 | 670 | 1.51e-46 | 181 |
| Msa0048090 | AT5G57350.2 | 25.421 | 712 | 442 | 23 | 131 | 826 | 32 | 670 | 1.51e-46 | 181 |
| Msa0048090 | AT5G57350.1 | 25.421 | 712 | 442 | 23 | 131 | 826 | 32 | 670 | 1.51e-46 | 181 |
| Msa0048090 | AT3G42640.1 | 24.581 | 716 | 443 | 20 | 131 | 826 | 34 | 672 | 3.12e-46 | 180 |
| Msa0048090 | AT4G30190.1 | 25.983 | 712 | 438 | 25 | 131 | 826 | 31 | 669 | 4.33e-46 | 180 |
| Msa0048090 | AT1G17260.1 | 25.641 | 702 | 430 | 16 | 131 | 819 | 39 | 661 | 4.46e-46 | 180 |
| Msa0048090 | AT2G18960.1 | 25.421 | 712 | 442 | 25 | 131 | 826 | 31 | 669 | 5.54e-45 | 176 |
| Msa0048090 | AT5G62670.1 | 24.857 | 700 | 439 | 21 | 131 | 819 | 35 | 658 | 6.15e-45 | 176 |
| Msa0048090 | AT3G47950.1 | 25.499 | 702 | 432 | 24 | 131 | 819 | 39 | 662 | 2.78e-44 | 174 |
| Msa0048090 | AT3G47950.2 | 25.499 | 702 | 432 | 24 | 131 | 819 | 39 | 662 | 2.78e-44 | 174 |
| Msa0048090 | AT2G18960.3 | 26.202 | 603 | 365 | 21 | 237 | 826 | 70 | 605 | 1.24e-43 | 172 |
| Msa0048090 | AT2G18960.2 | 26.202 | 603 | 365 | 21 | 237 | 826 | 70 | 605 | 1.24e-43 | 172 |
| Msa0048090 | AT4G30190.2 | 25.101 | 745 | 436 | 27 | 131 | 826 | 31 | 702 | 9.28e-41 | 163 |
| Msa0048090 | AT5G57350.3 | 24.886 | 438 | 272 | 13 | 400 | 826 | 17 | 408 | 2.96e-32 | 135 |
| Msa0048090 | AT2G24520.4 | 23.973 | 438 | 276 | 12 | 400 | 826 | 17 | 408 | 1.31e-31 | 133 |
| Msa0048090 | AT5G44790.1 | 25.395 | 697 | 387 | 27 | 156 | 822 | 353 | 946 | 7.98e-31 | 131 |
| Msa0048090 | AT5G23630.1 | 21.538 | 715 | 430 | 26 | 134 | 769 | 167 | 829 | 9.71e-19 | 92.8 |
| Msa0048090 | AT4G33520.2 | 24.312 | 654 | 373 | 22 | 181 | 822 | 334 | 877 | 4.96e-18 | 90.5 |
| Msa0048090 | AT4G33520.3 | 24.387 | 652 | 371 | 22 | 181 | 820 | 334 | 875 | 7.34e-18 | 89.7 |
| Msa0048090 | AT1G68710.2 | 24.783 | 460 | 242 | 15 | 487 | 858 | 535 | 978 | 1.50e-17 | 89.0 |
| Msa0048090 | AT1G68710.1 | 24.783 | 460 | 242 | 15 | 487 | 858 | 535 | 978 | 1.50e-17 | 89.0 |
| Msa0048090 | AT1G68710.3 | 24.783 | 460 | 242 | 15 | 487 | 858 | 535 | 978 | 1.67e-17 | 89.0 |
| Msa0048090 | AT1G63440.1 | 31.461 | 178 | 93 | 3 | 645 | 822 | 787 | 935 | 1.40e-16 | 85.5 |
| Msa0048090 | AT1G26130.1 | 23.884 | 448 | 237 | 13 | 487 | 847 | 530 | 960 | 1.95e-16 | 85.5 |
| Msa0048090 | AT5G04930.1 | 22.649 | 521 | 262 | 16 | 378 | 775 | 378 | 880 | 3.72e-16 | 84.3 |
| Msa0048090 | AT1G59820.1 | 24.890 | 454 | 226 | 15 | 468 | 833 | 499 | 925 | 4.49e-16 | 84.3 |
| Msa0048090 | AT3G13900.1 | 25.373 | 469 | 238 | 17 | 489 | 858 | 539 | 994 | 7.56e-16 | 83.6 |
| Msa0048090 | AT4G30110.1 | 31.606 | 193 | 94 | 7 | 618 | 801 | 481 | 644 | 8.81e-16 | 83.2 |
| Msa0048090 | AT4G30110.2 | 31.606 | 193 | 94 | 7 | 618 | 801 | 481 | 644 | 8.81e-16 | 83.2 |
| Msa0048090 | AT1G26130.2 | 22.545 | 448 | 244 | 11 | 487 | 847 | 530 | 961 | 5.70e-15 | 80.5 |
| Msa0048090 | AT1G26130.4 | 22.545 | 448 | 244 | 11 | 487 | 847 | 530 | 961 | 5.70e-15 | 80.5 |
| Msa0048090 | AT1G26130.3 | 22.545 | 448 | 244 | 11 | 487 | 847 | 530 | 961 | 5.70e-15 | 80.5 |
| Msa0048090 | AT1G17500.2 | 22.899 | 476 | 252 | 15 | 484 | 858 | 514 | 975 | 1.28e-14 | 79.3 |
| Msa0048090 | AT1G17500.1 | 22.899 | 476 | 252 | 15 | 484 | 858 | 514 | 975 | 1.28e-14 | 79.3 |
| Msa0048090 | AT3G13900.3 | 25.455 | 385 | 182 | 14 | 489 | 778 | 539 | 913 | 1.76e-13 | 75.5 |
| Msa0048090 | AT1G72700.1 | 23.869 | 398 | 208 | 11 | 543 | 858 | 603 | 987 | 2.62e-13 | 75.1 |
| Msa0048090 | AT1G72700.3 | 23.869 | 398 | 208 | 11 | 543 | 858 | 603 | 987 | 2.62e-13 | 75.1 |
| Msa0048090 | AT1G72700.2 | 23.869 | 398 | 208 | 11 | 543 | 858 | 603 | 987 | 2.62e-13 | 75.1 |
| Msa0048090 | AT3G13900.2 | 25.722 | 381 | 177 | 14 | 489 | 775 | 539 | 907 | 3.26e-13 | 74.7 |
| Msa0048090 | AT4G11730.1 | 22.343 | 367 | 242 | 10 | 118 | 474 | 23 | 356 | 7.86e-13 | 73.2 |
| Msa0048090 | AT1G13210.1 | 24.408 | 422 | 213 | 18 | 389 | 718 | 367 | 774 | 3.58e-12 | 71.2 |
| Msa0048090 | AT2G19110.2 | 24.549 | 277 | 161 | 8 | 608 | 878 | 481 | 715 | 4.25e-12 | 71.2 |
| Msa0048090 | AT2G19110.3 | 24.549 | 277 | 161 | 8 | 608 | 878 | 481 | 715 | 4.25e-12 | 71.2 |
| Msa0048090 | AT2G19110.1 | 24.549 | 277 | 161 | 8 | 608 | 878 | 481 | 715 | 4.25e-12 | 71.2 |
| Msa0048090 | AT5G21930.4 | 27.753 | 227 | 151 | 6 | 245 | 466 | 345 | 563 | 4.21e-11 | 67.8 |
| Msa0048090 | AT5G21930.2 | 27.753 | 227 | 151 | 6 | 245 | 466 | 345 | 563 | 4.29e-11 | 67.8 |
| Msa0048090 | AT5G21930.1 | 27.753 | 227 | 151 | 6 | 245 | 466 | 345 | 563 | 4.29e-11 | 67.8 |
Find 241 sgRNAs with CRISPR-Local
Find 590 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGAATTTGGCTTGGTTTC+AGG | 0.141946 | 1_2:+129864 | Msa0048090:CDS |
| ATATGGTGGTTGATAAAATT+TGG | 0.156993 | 1_2:+129661 | Msa0048090:CDS |
| GGTGAGGTTGTTGCTGTTAC+TGG | 0.165535 | 1_2:+130597 | Msa0048090:CDS |
| GAACAAAATCACACTCTTTC+AGG | 0.173208 | 1_2:-132852 | None:intergenic |
| GAATCAGCAATATTGGAATT+TGG | 0.218100 | 1_2:+129852 | Msa0048090:CDS |
| ATCTCTGCAGTTCTTAGATT+TGG | 0.221817 | 1_2:+128939 | Msa0048090:CDS |
| TGGTTACTCAGTTTGTTATT+TGG | 0.231534 | 1_2:+132729 | Msa0048090:CDS |
| GCTTTGGGTTAACTTGATTA+TGG | 0.233906 | 1_2:+131552 | Msa0048090:CDS |
| CATAGTAGGCAAGAGATTTA+TGG | 0.239169 | 1_2:+128697 | Msa0048090:CDS |
| AATGGAGTTGCTACAGTAAT+TGG | 0.246434 | 1_2:+129318 | Msa0048090:CDS |
| TCCCTCTAACCTGGCAATTC+TGG | 0.255781 | 1_2:+132709 | Msa0048090:CDS |
| CTATTGTCAAAGTGGCAAAA+TGG | 0.256670 | 1_2:+131311 | Msa0048090:CDS |
| TCTTTCTGCTTGTGAGACTA+TGG | 0.268004 | 1_2:+129587 | Msa0048090:CDS |
| CTTTGATGTGCTACACGTTT+TGG | 0.272434 | 1_2:+133036 | Msa0048090:three_prime_UTR |
| ACCTCCTAATGATGGACTTA+TGG | 0.285968 | 1_2:+131606 | Msa0048090:CDS |
| CACTCTTGGTGCATTGGCTT+TGG | 0.289511 | 1_2:+131576 | Msa0048090:CDS |
| TAACTGCTGTTCAATTGCTT+TGG | 0.292272 | 1_2:+131536 | Msa0048090:CDS |
| AATCTTACTTAGTATATTCT+TGG | 0.297442 | 1_2:+128882 | Msa0048090:CDS |
| CGGGATGTTGGTTTCTCCTT+GGG | 0.301579 | 1_2:-130177 | None:intergenic |
| GGTTATGAGGCACTGCCTTC+TGG | 0.301784 | 1_2:+132828 | Msa0048090:CDS |
| CTCAACCTTAAGTACCTTAC+AGG | 0.303221 | 1_2:-129913 | None:intergenic |
| AATCTCTGATTTCAACTTAT+CGG | 0.303785 | 1_2:-129724 | None:intergenic |
| CCAACATCAGGGAAAGTTTC+GGG | 0.306198 | 1_2:+123849 | Msa0048090:five_prime_UTR |
| GAGAACAGAACCTGAATTCT+AGG | 0.312715 | 1_2:-130437 | None:intergenic |
| AGAAAAGCAGAAGAAAATTC+AGG | 0.312793 | 1_2:+124431 | Msa0048090:CDS |
| AAGACTAGAGCAGCTGGTTT+TGG | 0.314718 | 1_2:+128541 | Msa0048090:CDS |
| CCGGGATGTTGGTTTCTCCT+TGG | 0.315499 | 1_2:-130178 | None:intergenic |
| ACCAACAGAATCAGCAATAT+TGG | 0.321328 | 1_2:+129845 | Msa0048090:CDS |
| AACTGCTGTTCAATTGCTTT+GGG | 0.324794 | 1_2:+131537 | Msa0048090:CDS |
| TGAAAGGATACCTTGAATTC+AGG | 0.328357 | 1_2:-124135 | None:intergenic |
| ACAATCTTTGCTTTCTCTTC+AGG | 0.328550 | 1_2:-130080 | None:intergenic |
| AAATGCTGATGTCATTATAA+TGG | 0.331729 | 1_2:+131273 | Msa0048090:CDS |
| TTGAGTACAGCAGTTGAATC+TGG | 0.332181 | 1_2:-131766 | None:intergenic |
| TGATTTCAAGAACTATAAAA+AGG | 0.332297 | 1_2:+128603 | Msa0048090:CDS |
| AGAAGGAAAACAGACAATAC+TGG | 0.344901 | 1_2:+129818 | Msa0048090:CDS |
| CTTAACACTGATCATTCTAA+TGG | 0.353334 | 1_2:+128786 | Msa0048090:CDS |
| TATTGTCAAAGTGGCAAAAT+GGG | 0.358319 | 1_2:+131312 | Msa0048090:CDS |
| GGACTTGCCATGGGCATTGC+CGG | 0.359215 | 1_2:+130663 | Msa0048090:CDS |
| ACACCATCATAAACACCTTT+TGG | 0.360503 | 1_2:-128856 | None:intergenic |
| TTTCAACTGGTATGCATTTG+AGG | 0.370033 | 1_2:-132779 | None:intergenic |
| TTCTTGAGCTAGAGCACGTT+TGG | 0.372947 | 1_2:-124412 | None:intergenic |
| GCTACAGTAATTGGTAAAAT+CGG | 0.373750 | 1_2:+129327 | Msa0048090:CDS |
| TCCTGTGCGCCCTGGAGTTA+AGG | 0.379401 | 1_2:+130241 | Msa0048090:CDS |
| TTCTTCTGATAACCAACATC+AGG | 0.386107 | 1_2:+123837 | Msa0048090:five_prime_UTR |
| AAAGAGTTCTCAAAGCTTCA+TGG | 0.388729 | 1_2:-130127 | None:intergenic |
| CTTTCCATAAGTCCATCATT+AGG | 0.389201 | 1_2:-131610 | None:intergenic |
| AGCTTTGAGAACTCTTTGTT+TGG | 0.397094 | 1_2:+130133 | Msa0048090:CDS |
| ACCAACATCAGGGAAAGTTT+CGG | 0.397222 | 1_2:+123848 | Msa0048090:five_prime_UTR |
| GGATATCATACCTAGAATTC+AGG | 0.399897 | 1_2:+130427 | Msa0048090:CDS |
| GTTGTGGTATCTCTTTCAAC+TGG | 0.401862 | 1_2:-132792 | None:intergenic |
| AAACTTGCTTTCTTTCCAAC+TGG | 0.405916 | 1_2:-131637 | None:intergenic |
| GATATAGTTCATTTGTCAAC+TGG | 0.406736 | 1_2:+129045 | Msa0048090:CDS |
| TCAATTTATGACTTGGTAGT+TGG | 0.408891 | 1_2:+129021 | Msa0048090:CDS |
| CAATCGAAGCTCTCACTAGA+TGG | 0.409264 | 1_2:+124328 | Msa0048090:CDS |
| ACAGCTAACGGTAATCCTTC+AGG | 0.409892 | 1_2:-129504 | None:intergenic |
| ACCAATATCAGGGAAAGCTT+CGG | 0.412810 | 1_2:+128190 | Msa0048090:intron |
| AGTAATCATAGTTGAGTTCC+TGG | 0.415421 | 1_2:+132668 | Msa0048090:CDS |
| TATATTTCAGAATACTTCTT+CGG | 0.415739 | 1_2:+129779 | Msa0048090:CDS |
| TCATCACACTAACCTAGCTT+TGG | 0.416928 | 1_2:+124207 | Msa0048090:intron |
| GATATTCCTCCACATTGGTT+TGG | 0.417862 | 1_2:-131665 | None:intergenic |
| ATAGTAGGCAAGAGATTTAT+GGG | 0.418505 | 1_2:+128698 | Msa0048090:CDS |
| CCAATATCAGGGAAAGCTTC+GGG | 0.418828 | 1_2:+128191 | Msa0048090:intron |
| ATCAAAGTATATCCATTCTC+CGG | 0.419839 | 1_2:-130197 | None:intergenic |
| ATTGTGAATGACATTATAGA+TGG | 0.421348 | 1_2:+130098 | Msa0048090:CDS |
| TATGGACACTCTTGGTGCAT+TGG | 0.423778 | 1_2:+131570 | Msa0048090:CDS |
| ACCACAAGTCTTCTAGATCT+AGG | 0.424853 | 1_2:+124005 | Msa0048090:five_prime_UTR |
| ATCGATGGAAGGTTATCTTA+AGG | 0.425469 | 1_2:+124278 | Msa0048090:exon |
| CGCTTGACCATCTTGCACTT+TGG | 0.430081 | 1_2:-129193 | None:intergenic |
| TAAGCGAATTCAAACTGGTC+TGG | 0.434098 | 1_2:+124088 | Msa0048090:five_prime_UTR |
| TTCGTTTCTGCATGCATCAC+TGG | 0.436974 | 1_2:+131412 | Msa0048090:CDS |
| ATTGATGAATCAAGTTTGTC+AGG | 0.437900 | 1_2:+129117 | Msa0048090:CDS |
| CACCAAACATATTCCTCAAA+CGG | 0.439529 | 1_2:-130578 | None:intergenic |
| CTTCGATTGTCTATATCTAC+AGG | 0.439863 | 1_2:-129150 | None:intergenic |
| AACCAGAATTGCCAGGTTAG+AGG | 0.444158 | 1_2:-132711 | None:intergenic |
| TCAATCTGTAGCTGCAAAAG+TGG | 0.446826 | 1_2:-133165 | None:intergenic |
| TATTGGTACACCTGAATTCA+AGG | 0.447099 | 1_2:+128510 | Msa0048090:CDS |
| TAGATCCTGTAAGGTACTTA+AGG | 0.447999 | 1_2:+129908 | Msa0048090:CDS |
| AAAATACTTTGGTGAGAAGT+TGG | 0.448100 | 1_2:-132983 | None:intergenic |
| ATGGAGAACTGCCGTTACTT+TGG | 0.448289 | 1_2:+124347 | Msa0048090:CDS |
| ATCGAATCGATTCAAAAGAT+AGG | 0.451177 | 1_2:-124031 | None:intergenic |
| AGCAATATTGGAATTTGGCT+TGG | 0.452620 | 1_2:+129857 | Msa0048090:CDS |
| TTATCTTAAGGATTTCGAAT+TGG | 0.455036 | 1_2:+124290 | Msa0048090:CDS |
| GATAGCCATTGTGGGAATCA+AGG | 0.456922 | 1_2:+130217 | Msa0048090:CDS |
| ACCCGTTTGAGGAATATGTT+TGG | 0.457502 | 1_2:+130576 | Msa0048090:CDS |
| AGCAATTGAACAGCAGTTAG+TGG | 0.459466 | 1_2:-131532 | None:intergenic |
| ATGTCTGACTCGTGCAGTGC+AGG | 0.459614 | 1_2:-130639 | None:intergenic |
| TTGTATCAACTGATTGTCCT+TGG | 0.461000 | 1_2:+131700 | Msa0048090:CDS |
| CTTTCTGCTTGTGAGACTAT+GGG | 0.464616 | 1_2:+129588 | Msa0048090:CDS |
| GAGGGAGGTGTAGCTATAGA+AGG | 0.464787 | 1_2:+130368 | Msa0048090:CDS |
| TGAATGAAAATTCCATCAGC+TGG | 0.468842 | 1_2:-129078 | None:intergenic |
| GTGCTAGTGGGTCTTCCTGA+TGG | 0.469570 | 1_2:+129966 | Msa0048090:CDS |
| TGAACAGCTTCCTTAACTCC+AGG | 0.470425 | 1_2:-130251 | None:intergenic |
| TGTGGGAATCCCTATGCCTA+TGG | 0.471986 | 1_2:-128824 | None:intergenic |
| CTTTAGTTTCCATAGGCATA+GGG | 0.475858 | 1_2:+128815 | Msa0048090:CDS |
| TCAGAGGCATGTTTGACAGC+TGG | 0.476043 | 1_2:+132607 | Msa0048090:CDS |
| CCCGAAACTTTCCCTGATGT+TGG | 0.476413 | 1_2:-123849 | None:intergenic |
| CCCACAGAAGGGTGGCCAAA+AGG | 0.478654 | 1_2:+128841 | Msa0048090:CDS |
| ACCAAACATATTCCTCAAAC+GGG | 0.479261 | 1_2:-130577 | None:intergenic |
| TAGTGGGTCTTCCTGATGGA+GGG | 0.479276 | 1_2:+129970 | Msa0048090:CDS |
| GAAACCAACATCCCGGAGAA+TGG | 0.480331 | 1_2:+130185 | Msa0048090:CDS |
| TCTATTCATGTTACCAGGGA+TGG | 0.481195 | 1_2:+128982 | Msa0048090:CDS |
| CCAGCACTGTCCCTCTAACC+TGG | 0.481218 | 1_2:+132700 | Msa0048090:CDS |
| TCCTTAACTCCAGGGCGCAC+AGG | 0.483869 | 1_2:-130242 | None:intergenic |
| GAAGAAGATGTCGGTGCTAG+TGG | 0.484386 | 1_2:+129953 | Msa0048090:CDS |
| CCACTGCAGGTGAAATTGAA+TGG | 0.486294 | 1_2:+129300 | Msa0048090:CDS |
| AGATTTCTATTCATGTTACC+AGG | 0.486602 | 1_2:+128977 | Msa0048090:CDS |
| GTTGTTGCTGTTACTGGTGA+TGG | 0.492352 | 1_2:+130603 | Msa0048090:CDS |
| CTAGAGACAAACCTCGGTTC+CGG | 0.492595 | 1_2:-130682 | None:intergenic |
| GCTTTAGTTTCCATAGGCAT+AGG | 0.492724 | 1_2:+128814 | Msa0048090:CDS |
| CTAGTGGGTCTTCCTGATGG+AGG | 0.496303 | 1_2:+129969 | Msa0048090:CDS |
| ATCAAGGATCCTGTGCGCCC+TGG | 0.496490 | 1_2:+130233 | Msa0048090:CDS |
| ATACCTTGGTAACCCGTTTG+AGG | 0.501202 | 1_2:+130565 | Msa0048090:CDS |
| AAAGCTCGGACCCCTCCATC+AGG | 0.501465 | 1_2:-129981 | None:intergenic |
| AAAAGGTTGGTGAAGTTCAA+GGG | 0.503522 | 1_2:+128620 | Msa0048090:CDS |
| TAGATGGTTTCTCGGTATAA+CGG | 0.503563 | 1_2:-128726 | None:intergenic |
| TTGGTTCCCGAAAGAAGAAA+AGG | 0.505699 | 1_2:-129174 | None:intergenic |
| TCTGAAATATAGCCTGCAAA+AGG | 0.510920 | 1_2:-129767 | None:intergenic |
| CCATTCAATTTCACCTGCAG+TGG | 0.511766 | 1_2:-129300 | None:intergenic |
| AACTTGATTATGGACACTCT+TGG | 0.513459 | 1_2:+131562 | Msa0048090:CDS |
| GGGGTCCGAGCTTTCTGCAA+AGG | 0.516979 | 1_2:+129990 | Msa0048090:CDS |
| CTCGGTTCCGGCAATGCCCA+TGG | 0.517874 | 1_2:-130670 | None:intergenic |
| TCAGACAGATTGCGAAACTC+TGG | 0.517887 | 1_2:-130392 | None:intergenic |
| GATAAAATCATTGATAGTAA+TGG | 0.518109 | 1_2:+130041 | Msa0048090:CDS |
| AAAGCATCATGATGGTTATG+AGG | 0.519175 | 1_2:+132815 | Msa0048090:CDS |
| ACCAGAATTGCCAGGTTAGA+GGG | 0.520569 | 1_2:-132710 | None:intergenic |
| TGCATTTGCACTGATAAGAC+AGG | 0.521747 | 1_2:+129621 | Msa0048090:CDS |
| CTTTCCGTCTCAGTTGATGA+AGG | 0.524811 | 1_2:+128655 | Msa0048090:CDS |
| GCTACTGAACCTCCTAATGA+TGG | 0.526045 | 1_2:+131598 | Msa0048090:CDS |
| TTCTTCCTGTCTGAATTGAA+AGG | 0.527349 | 1_2:-129936 | None:intergenic |
| TCCAATATTGCTGATTCTGT+TGG | 0.527643 | 1_2:-129846 | None:intergenic |
| AGCTGTATTTATGTTATCGC+CGG | 0.528457 | 1_2:-130312 | None:intergenic |
| TTTATCAACCACCATATGGT+TGG | 0.532379 | 1_2:-129655 | None:intergenic |
| GGTGATCAAGTTCCAGCTGA+TGG | 0.533497 | 1_2:+129066 | Msa0048090:CDS |
| TCAGAAAAGACTAGAGCAGC+TGG | 0.535230 | 1_2:+128535 | Msa0048090:CDS |
| CTTCACTACTATTGTCAAAG+TGG | 0.537544 | 1_2:+131303 | Msa0048090:CDS |
| AAGAGGCTGCTGGGACTAAG+TGG | 0.538097 | 1_2:+131742 | Msa0048090:CDS |
| TTAATGGAGACTTCGCTAGT+TGG | 0.538476 | 1_2:+129412 | Msa0048090:CDS |
| TTTGAGGGGAAGAGGCTGCT+GGG | 0.539430 | 1_2:+131733 | Msa0048090:CDS |
| GCCTCTTGACAAGCATACCT+TGG | 0.541001 | 1_2:+130551 | Msa0048090:CDS |
| TCGATTGATTTATAGAGAAG+TGG | 0.544358 | 1_2:+124049 | Msa0048090:five_prime_UTR |
| GTGCTGCTCTGCTCGTTGAA+CGG | 0.544766 | 1_2:-123881 | None:intergenic |
| CCAATGTGGAGGAATATCTT+CGG | 0.544789 | 1_2:+131670 | Msa0048090:CDS |
| TGCACAGCGTAGATCCTGTA+AGG | 0.546342 | 1_2:+129899 | Msa0048090:CDS |
| AGAAACGAAACGAAACGAAA+AGG | 0.546836 | 1_2:-124167 | None:intergenic |
| TCCATAAGTCCATCATTAGG+AGG | 0.546893 | 1_2:-131607 | None:intergenic |
| ATAAGCGTTCGCATGGTCAC+CGG | 0.547578 | 1_2:+130293 | Msa0048090:CDS |
| AGTGGGTCTTCCTGATGGAG+GGG | 0.548458 | 1_2:+129971 | Msa0048090:CDS |
| GTCAAGACAGTATACATAGT+AGG | 0.550089 | 1_2:+128683 | Msa0048090:CDS |
| AACGTTGACGACCAACCATA+TGG | 0.550519 | 1_2:+129644 | Msa0048090:CDS |
| GAAGGTTTCAATTTATGACT+TGG | 0.554161 | 1_2:+129014 | Msa0048090:CDS |
| ACAACTGATGCAATATCATC+CGG | 0.554785 | 1_2:-128571 | None:intergenic |
| TTGAGCCTTTCAATTCAGAC+AGG | 0.555436 | 1_2:+129931 | Msa0048090:CDS |
| AAGATGATAGTTACAACTGT+TGG | 0.555634 | 1_2:+129216 | Msa0048090:CDS |
| GGATTTCGAATTGGAAGACA+AGG | 0.556134 | 1_2:+124299 | Msa0048090:CDS |
| ATGCACCTTTGCAGAAAGCT+CGG | 0.556163 | 1_2:-129995 | None:intergenic |
| GAAGTAGTTAAAGACAAAGA+AGG | 0.556974 | 1_2:+129801 | Msa0048090:CDS |
| AACTGAGTGGGGAAAGCTGA+TGG | 0.557224 | 1_2:+129245 | Msa0048090:CDS |
| TCAAAGTATATCCATTCTCC+GGG | 0.557569 | 1_2:-130196 | None:intergenic |
| CTTTGGTGAGAAGTTGGTGT+GGG | 0.557854 | 1_2:-132977 | None:intergenic |
| ATATCCATTCTCCGGGATGT+TGG | 0.558522 | 1_2:-130189 | None:intergenic |
| GTCAGACATTGGACTTGCCA+TGG | 0.558667 | 1_2:+130653 | Msa0048090:CDS |
| AAAGGTGTTTATGATGGTGT+TGG | 0.559324 | 1_2:+128859 | Msa0048090:CDS |
| CCAGGTTAGAGGGACAGTGC+TGG | 0.560785 | 1_2:-132700 | None:intergenic |
| CTTCGCTAGTTGGTCTTCAG+AGG | 0.562517 | 1_2:+129422 | Msa0048090:CDS |
| TGAGTACAGCAGTTGAATCT+GGG | 0.563625 | 1_2:-131765 | None:intergenic |
| CCGAAGATATTCCTCCACAT+TGG | 0.563999 | 1_2:-131670 | None:intergenic |
| GTTTGTGCTTTAGTTTCCAT+AGG | 0.564675 | 1_2:+128808 | Msa0048090:CDS |
| ATAGTTGTTGCGATTCCTGA+AGG | 0.565563 | 1_2:+129489 | Msa0048090:CDS |
| GAAGGAAAACAGACAATACT+GGG | 0.566868 | 1_2:+129819 | Msa0048090:CDS |
| GTGCAGTGCAGGAGCATCGT+TGG | 0.567070 | 1_2:-130628 | None:intergenic |
| CATGGGCATTGCCGGAACCG+AGG | 0.567496 | 1_2:+130671 | Msa0048090:CDS |
| CAAAGTGGCAAAATGGGGAC+GGG | 0.568035 | 1_2:+131318 | Msa0048090:CDS |
| GCACTGCACGAGTCAGACAT+TGG | 0.570157 | 1_2:+130642 | Msa0048090:CDS |
| CAGTGCTGGCAAATGTTCCC+AGG | 0.571108 | 1_2:-132686 | None:intergenic |
| TATACTTTGATAGCCATTGT+GGG | 0.571307 | 1_2:+130209 | Msa0048090:CDS |
| TCTGTCTGAGGAGCAAATGA+AGG | 0.571811 | 1_2:+130406 | Msa0048090:CDS |
| GGCATAGGGATTCCCACAGA+AGG | 0.576706 | 1_2:+128829 | Msa0048090:CDS |
| AGACTAAGTGTTACAGCTAA+CGG | 0.576798 | 1_2:-129516 | None:intergenic |
| CCTCAAAATTTAGAACTCCA+AGG | 0.577224 | 1_2:-131717 | None:intergenic |
| TCAGACATTGGACTTGCCAT+GGG | 0.578262 | 1_2:+130654 | Msa0048090:CDS |
| TCTTCTGATAACCAACATCA+GGG | 0.578610 | 1_2:+123838 | Msa0048090:five_prime_UTR |
| AAGAGTTCTCAAAGCTTCAT+GGG | 0.579933 | 1_2:-130126 | None:intergenic |
| GAATTTGGCTTGGTTTCAGG+TGG | 0.579993 | 1_2:+129867 | Msa0048090:CDS |
| CAGGGATGGTAAAAGACAGA+AGG | 0.579994 | 1_2:+128996 | Msa0048090:CDS |
| AGCAGGAATAAGCGTTCGCA+TGG | 0.580994 | 1_2:+130286 | Msa0048090:CDS |
| TCCTAGATCTAGAAGACTTG+TGG | 0.583451 | 1_2:-124006 | None:intergenic |
| TCAAAGTGGCAAAATGGGGA+CGG | 0.583944 | 1_2:+131317 | Msa0048090:CDS |
| ACTGAGTAACCAGAATTGCC+AGG | 0.585448 | 1_2:-132718 | None:intergenic |
| GAACAGCTTCCTTAACTCCA+GGG | 0.587962 | 1_2:-130250 | None:intergenic |
| AGAAGATGAGACTCCACTGC+AGG | 0.588851 | 1_2:+129287 | Msa0048090:CDS |
| CATTTGAGGATAGCAGCTAA+AGG | 0.593737 | 1_2:-132765 | None:intergenic |
| CCAAGGAGAAACCAACATCC+CGG | 0.595574 | 1_2:+130178 | Msa0048090:CDS |
| ATATACTTTGATAGCCATTG+TGG | 0.597537 | 1_2:+130208 | Msa0048090:CDS |
| AAGAAGATGTCGGTGCTAGT+GGG | 0.598729 | 1_2:+129954 | Msa0048090:CDS |
| AACTATTATAGTTACAGCAA+TGG | 0.598887 | 1_2:-129472 | None:intergenic |
| GTAATCATAGTTGAGTTCCT+GGG | 0.601720 | 1_2:+132669 | Msa0048090:CDS |
| CTGATGGAAACTTTGAGTGA+GGG | 0.603028 | 1_2:+129261 | Msa0048090:CDS |
| CGATAACATAAATACAGCTA+AGG | 0.604960 | 1_2:+130316 | Msa0048090:CDS |
| GACACCTTCATCAACTGAGA+CGG | 0.606673 | 1_2:-128659 | None:intergenic |
| ACCACAACAAAGCATCATGA+TGG | 0.607396 | 1_2:+132807 | Msa0048090:CDS |
| GCTGATGGAAACTTTGAGTG+AGG | 0.609051 | 1_2:+129260 | Msa0048090:CDS |
| GGTATGCTTGTCAAGAGGCA+AGG | 0.609665 | 1_2:-130547 | None:intergenic |
| TGGTCAAGAATCCTCGTCGG+AGG | 0.612394 | 1_2:+124367 | Msa0048090:CDS |
| GATTTCTATTCATGTTACCA+GGG | 0.614762 | 1_2:+128978 | Msa0048090:CDS |
| AACCATACAAAACCAAAGCT+AGG | 0.617100 | 1_2:-124219 | None:intergenic |
| TCGGGAACCAAAGTGCAAGA+TGG | 0.617459 | 1_2:+129186 | Msa0048090:CDS |
| ATGGAAACTTTGAGTGAGGG+AGG | 0.617992 | 1_2:+129264 | Msa0048090:CDS |
| CACACTCTTTCAGGACCAGA+AGG | 0.618029 | 1_2:-132843 | None:intergenic |
| TTATTACCAAACCAATGTGG+AGG | 0.619808 | 1_2:+131659 | Msa0048090:CDS |
| CTTATGGAAAGACAACCAGT+TGG | 0.619856 | 1_2:+131622 | Msa0048090:CDS |
| TGTTGGCATGAGAACTGAGT+GGG | 0.623986 | 1_2:+129233 | Msa0048090:CDS |
| GAAAAGATAAACATATTCAG+AGG | 0.624433 | 1_2:+132591 | Msa0048090:CDS |
| AACAGATTGAAATCGATGGA+AGG | 0.624749 | 1_2:+124267 | Msa0048090:exon |
| AGGATCCTTGATTCCCACAA+TGG | 0.625525 | 1_2:-130222 | None:intergenic |
| AGAATGCGGTATACTTACTG+AGG | 0.629838 | 1_2:+130349 | Msa0048090:CDS |
| GCATAGGGATTCCCACAGAA+GGG | 0.634175 | 1_2:+128830 | Msa0048090:CDS |
| AGAGTTTCGCAATCTGTCTG+AGG | 0.634441 | 1_2:+130394 | Msa0048090:CDS |
| TGGCCAAAAGGTGTTTATGA+TGG | 0.634795 | 1_2:+128853 | Msa0048090:CDS |
| TTTGAGGAATATGTTTGGTG+AGG | 0.643337 | 1_2:+130581 | Msa0048090:CDS |
| ACCAAGGTATGCTTGTCAAG+AGG | 0.643745 | 1_2:-130552 | None:intergenic |
| AGGATTCTTGACCAAAGTAA+CGG | 0.644536 | 1_2:-124358 | None:intergenic |
| GAAAAGACTGTGGAGATGAA+AGG | 0.645618 | 1_2:+129690 | Msa0048090:CDS |
| ATTCCTCAAACGGGTTACCA+AGG | 0.648170 | 1_2:-130568 | None:intergenic |
| ATTGTCAAAGTGGCAAAATG+GGG | 0.650955 | 1_2:+131313 | Msa0048090:CDS |
| ACCATCATGATGCTTTGTTG+TGG | 0.652131 | 1_2:-132808 | None:intergenic |
| TTCAGACAGGAAGAAGATGT+CGG | 0.657425 | 1_2:+129944 | Msa0048090:CDS |
| TTGGATATGTGAAAAGACTG+TGG | 0.658651 | 1_2:+129680 | Msa0048090:CDS |
| ACTTTGGTGAGAAGTTGGTG+TGG | 0.658737 | 1_2:-132978 | None:intergenic |
| GAATGCGGTATACTTACTGA+GGG | 0.662028 | 1_2:+130350 | Msa0048090:CDS |
| TGCGGTATACTTACTGAGGG+AGG | 0.662412 | 1_2:+130353 | Msa0048090:CDS |
| CTTTGGTCAAGAATCCTCGT+CGG | 0.668315 | 1_2:+124364 | Msa0048090:CDS |
| TAGGGATTCCCACAGAAGGG+TGG | 0.670339 | 1_2:+128833 | Msa0048090:CDS |
| AAAGACATAGATGAAACCCA+AGG | 0.685479 | 1_2:+130161 | Msa0048090:CDS |
| GTTGACGACCAACCATATGG+TGG | 0.691126 | 1_2:+129647 | Msa0048090:CDS |
| ATGCAGTGCTGCTCGTTGAG+CGG | 0.695225 | 1_2:-128223 | None:intergenic |
| ACGTTTCGAAACCTCCGACG+AGG | 0.707414 | 1_2:-124378 | None:intergenic |
| AAGGCTATAGCTAAAGAATG+CGG | 0.709220 | 1_2:+130335 | Msa0048090:CDS |
| GATTACTTGAAATACCGCTG+TGG | 0.733358 | 1_2:-132652 | None:intergenic |
| AAGTGTTATTCTCGCCACAG+CGG | 0.737214 | 1_2:+132638 | Msa0048090:CDS |
| CTGTTGGCATGAGAACTGAG+TGG | 0.779758 | 1_2:+129232 | Msa0048090:CDS |
| GTTGGCATGAGAACTGAGTG+GGG | 0.801756 | 1_2:+129234 | Msa0048090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr1_2:124782-124801 | Msa0048090:intron | 10.0% |
| !!! | ATATTAATAACATAACTTTT+TGG | + | chr1_2:125289-125308 | Msa0048090:intron | 10.0% |
| !! | TTTAATAAAAAATTGTGTAA+TGG | - | chr1_2:125881-125900 | None:intergenic | 10.0% |
| !!! | TAAAATAATCATTATTTTGT+TGG | + | chr1_2:125897-125916 | Msa0048090:intron | 10.0% |
| !! | TAATTTAATATTATGCAATA+GGG | - | chr1_2:126461-126480 | None:intergenic | 10.0% |
| !!! | AGTGTTATTTAAATTAAATT+TGG | + | chr1_2:126602-126621 | Msa0048090:intron | 10.0% |
| !!! | GTGTTATTTAAATTAAATTT+GGG | + | chr1_2:126603-126622 | Msa0048090:intron | 10.0% |
| !!! | TTTTATAGTATTAACATTAT+TGG | + | chr1_2:126793-126812 | Msa0048090:intron | 10.0% |
| !! | TTTATAGTATTAACATTATT+GGG | + | chr1_2:126794-126813 | Msa0048090:intron | 10.0% |
| !!! | CACAATTTATATTTTAAATT+TGG | + | chr1_2:127738-127757 | Msa0048090:intron | 10.0% |
| !!! | AGATTTTATATTGAAAAAAT+TGG | - | chr1_2:127988-128007 | None:intergenic | 10.0% |
| !! | TAATTGATCATAATATTAAA+AGG | + | chr1_2:132041-132060 | Msa0048090:intron | 10.0% |
| !! | TAATTAGAGTTATATTGTAT+TGG | + | chr1_2:124847-124866 | Msa0048090:intron | 15.0% |
| !! | ATTATACTCAAAAATAGAAA+AGG | - | chr1_2:125119-125138 | None:intergenic | 15.0% |
| !!! | TATTGATAACTAATATTTGT+TGG | - | chr1_2:125505-125524 | None:intergenic | 15.0% |
| !! | ATTTAAGAACTCTAAATTAA+AGG | + | chr1_2:126040-126059 | Msa0048090:intron | 15.0% |
| !! | TTATGAGAAAAATATACTAT+TGG | + | chr1_2:126319-126338 | Msa0048090:intron | 15.0% |
| !! | TATGAGAAAAATATACTATT+GGG | + | chr1_2:126320-126339 | Msa0048090:intron | 15.0% |
| !! | CTAATTTAATATTATGCAAT+AGG | - | chr1_2:126462-126481 | None:intergenic | 15.0% |
| !!! | AAACTTTGTTTTTTTTTTGT+TGG | - | chr1_2:126497-126516 | None:intergenic | 15.0% |
| !! | TATTTAAATTAAATTTGGGT+TGG | + | chr1_2:126607-126626 | Msa0048090:intron | 15.0% |
| !!! | TTTTCTATTTTAACTTGTTT+GGG | - | chr1_2:127565-127584 | None:intergenic | 15.0% |
| !!! | TTTTTCTATTTTAACTTGTT+TGG | - | chr1_2:127566-127585 | None:intergenic | 15.0% |
| !! | AAATAGAAAAACAACAAAAA+AGG | + | chr1_2:127575-127594 | Msa0048090:intron | 15.0% |
| !!! | TGTAACATTAAAGTTTTTTT+AGG | + | chr1_2:127874-127893 | Msa0048090:intron | 15.0% |
| !!! | AAATATAATTTTAACTACTG+TGG | - | chr1_2:128368-128387 | None:intergenic | 15.0% |
| !! | GAAAAAATTAATGAATGATA+AGG | + | chr1_2:129551-129570 | Msa0048090:CDS | 15.0% |
| !!! | TTTTTGAATGTTTATGTATA+TGG | - | chr1_2:131344-131363 | None:intergenic | 15.0% |
| !!! | AAAATTTAAAACTGTTAAAG+AGG | + | chr1_2:132156-132175 | Msa0048090:intron | 15.0% |
| !!! | TTATAACTTTGTTTTTTTGA+GGG | + | chr1_2:132402-132421 | Msa0048090:intron | 15.0% |
| !! | CATTTCTTCTTCATTATTAT+TGG | - | chr1_2:125056-125075 | None:intergenic | 20.0% |
| !! | CAATAATAATGAAGAAGAAA+TGG | + | chr1_2:125054-125073 | Msa0048090:intron | 20.0% |
| !! | ATTAACCATGTCAATAATAA+TGG | - | chr1_2:125454-125473 | None:intergenic | 20.0% |
| !! | ATGTCAAAATATTATTACTC+TGG | - | chr1_2:125607-125626 | None:intergenic | 20.0% |
| !! | AATAAAAAATTGTGTAATGG+AGG | - | chr1_2:125878-125897 | None:intergenic | 20.0% |
| !! | TCTCTAACAAAATGTTTAAA+TGG | - | chr1_2:125938-125957 | None:intergenic | 20.0% |
| !!! | TTTTGTTAGAGAGTTTTTAT+TGG | + | chr1_2:125946-125965 | Msa0048090:intron | 20.0% |
| !!! | TTAATACACTTTTCAAAAAG+TGG | - | chr1_2:126209-126228 | None:intergenic | 20.0% |
| !!! | TTTATTCCATTTTTGACAAA+AGG | - | chr1_2:126656-126675 | None:intergenic | 20.0% |
| !!! | TTTAATCTAAACTCTAAAGT+TGG | + | chr1_2:126836-126855 | Msa0048090:intron | 20.0% |
| !! | TAGATTTACAATGTAATCAT+AGG | - | chr1_2:126911-126930 | None:intergenic | 20.0% |
| !! | GATTACATTGTAAATCTATT+TGG | + | chr1_2:126913-126932 | Msa0048090:intron | 20.0% |
| !!! | AATTTTTTTGCAAAGATAAG+GGG | - | chr1_2:127028-127047 | None:intergenic | 20.0% |
| !!! | CAATTTTTTTGCAAAGATAA+GGG | - | chr1_2:127029-127048 | None:intergenic | 20.0% |
| !!! | AAAATTGCATTGTTTTTGTT+AGG | + | chr1_2:127113-127132 | Msa0048090:intron | 20.0% |
| !!! | AAATTGCATTGTTTTTGTTA+GGG | + | chr1_2:127114-127133 | Msa0048090:intron | 20.0% |
| !!! | TATTTTTTATGTGGTAAAAG+AGG | - | chr1_2:127258-127277 | None:intergenic | 20.0% |
| !!! | TCTTTTACCACATAAAAAAT+AGG | + | chr1_2:127257-127276 | Msa0048090:intron | 20.0% |
| !!! | TTTCTATTTTAACTTGTTTG+GGG | - | chr1_2:127564-127583 | None:intergenic | 20.0% |
| !!! | TTTTATAGTTCTTGAAATCA+TGG | - | chr1_2:128603-128622 | None:intergenic | 20.0% |
| !! | TGATTTCAAGAACTATAAAA+AGG | + | chr1_2:128603-128622 | Msa0048090:CDS | 20.0% |
| !! | AATCTTACTTAGTATATTCT+TGG | + | chr1_2:128882-128901 | Msa0048090:CDS | 20.0% |
| !! | TATATTTCAGAATACTTCTT+CGG | + | chr1_2:129779-129798 | Msa0048090:CDS | 20.0% |
| !!! | GATAAAATCATTGATAGTAA+TGG | + | chr1_2:130041-130060 | Msa0048090:CDS | 20.0% |
| !! | TCGTATGTTATTAATTGATA+TGG | + | chr1_2:130505-130524 | Msa0048090:intron | 20.0% |
| !! | TTATTAATTGATATGGTTTC+AGG | + | chr1_2:130512-130531 | Msa0048090:intron | 20.0% |
| !! | CAAAACATAATATAACTAGA+AGG | - | chr1_2:130826-130845 | None:intergenic | 20.0% |
| !!! | TTCTGTTATTTTGTCTATTA+AGG | + | chr1_2:130948-130967 | Msa0048090:intron | 20.0% |
| !!! | TTGCTACATGTTATTTTATT+TGG | + | chr1_2:131063-131082 | Msa0048090:intron | 20.0% |
| !! | ATTAGGGATTAATATAACAT+AGG | - | chr1_2:131201-131220 | None:intergenic | 20.0% |
| !! | GTTAACTTAAACATCAATTA+GGG | - | chr1_2:131217-131236 | None:intergenic | 20.0% |
| !! | AGTTAACTTAAACATCAATT+AGG | - | chr1_2:131218-131237 | None:intergenic | 20.0% |
| !!! | AAACTTTCTTCATTATTTTC+AGG | + | chr1_2:131502-131521 | Msa0048090:intron | 20.0% |
| !! | AAGAAGATAAAATGAATTGT+AGG | + | chr1_2:132014-132033 | Msa0048090:intron | 20.0% |
| !!! | TTCTAACTCAGTTATTTTAT+TGG | - | chr1_2:132096-132115 | None:intergenic | 20.0% |
| !!! | CTTATAACTTTGTTTTTTTG+AGG | + | chr1_2:132401-132420 | Msa0048090:intron | 20.0% |
| !!! | TATAACTTTGTTTTTTTGAG+GGG | + | chr1_2:132403-132422 | Msa0048090:intron | 20.0% |
| !!! | ATCAATTTTCCTTAAATACT+AGG | + | chr1_2:132451-132470 | Msa0048090:intron | 20.0% |
| ! | GAAAAGGTTGTTAAATTGAA+AGG | - | chr1_2:124154-124173 | None:intergenic | 25.0% |
| ! | TTATCTTAAGGATTTCGAAT+TGG | + | chr1_2:124290-124309 | Msa0048090:CDS | 25.0% |
| ! | GAGATTAAAGAAGAAAATGT+TGG | - | chr1_2:124467-124486 | None:intergenic | 25.0% |
| !! | TGATACAACTAATTCACTTT+TGG | + | chr1_2:124581-124600 | Msa0048090:intron | 25.0% |
| ! | TGTATAAATAAAGGAGAAAG+TGG | + | chr1_2:124791-124810 | Msa0048090:intron | 25.0% |
| !! | TTGAAATGACTCAGTTATTT+TGG | + | chr1_2:124894-124913 | Msa0048090:intron | 25.0% |
| !!! | TGAAATGACTCAGTTATTTT+GGG | + | chr1_2:124895-124914 | Msa0048090:intron | 25.0% |
| !!! | GGACACTTTTTTTAGTAAAT+GGG | + | chr1_2:124916-124935 | Msa0048090:intron | 25.0% |
| ! | TGAGATAATAATATGGAGAA+TGG | - | chr1_2:125396-125415 | None:intergenic | 25.0% |
| ! | TGGTTAATCATAAAATGAAC+TGG | + | chr1_2:125466-125485 | Msa0048090:intron | 25.0% |
| ! | TGATACTTTGCACTAATAAA+TGG | + | chr1_2:125533-125552 | Msa0048090:intron | 25.0% |
| ! | CAAAATATTATTACTCTGGT+TGG | - | chr1_2:125603-125622 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | - | chr1_2:125656-125675 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | chr1_2:125655-125674 | Msa0048090:intron | 25.0% |
| ! | TATCATTTCTCAACCAATTA+AGG | + | chr1_2:125780-125799 | Msa0048090:intron | 25.0% |
| !! | AATAGATATATGGCCTTAAT+TGG | - | chr1_2:125796-125815 | None:intergenic | 25.0% |
| ! | ATTAAGGCCATATATCTATT+AGG | + | chr1_2:125796-125815 | Msa0048090:intron | 25.0% |
| !! | TAGAGTACCTAATAGATATA+TGG | - | chr1_2:125806-125825 | None:intergenic | 25.0% |
| ! | ATATCTATTAGGTACTCTAT+TGG | + | chr1_2:125807-125826 | Msa0048090:intron | 25.0% |
| ! | TATCTATTAGGTACTCTATT+GGG | + | chr1_2:125808-125827 | Msa0048090:intron | 25.0% |
| !! | ATTTTGTTGGAAGTTATTGA+TGG | + | chr1_2:125910-125929 | Msa0048090:intron | 25.0% |
| !!! | TTTTCAAAAAGTGGTTGATA+AGG | - | chr1_2:126200-126219 | None:intergenic | 25.0% |
| !!! | TTGCAAACAAAATGTTTTTG+GGG | - | chr1_2:126583-126602 | None:intergenic | 25.0% |
| !! | CTTGCAAACAAAATGTTTTT+GGG | - | chr1_2:126584-126603 | None:intergenic | 25.0% |
| !! | ACTTGCAAACAAAATGTTTT+TGG | - | chr1_2:126585-126604 | None:intergenic | 25.0% |
| !!! | TAAATTAAATTTGGGTTGGA+CGG | + | chr1_2:126611-126630 | Msa0048090:intron | 25.0% |
| ! | GGAATAAAATAAAAAACGTG+AGG | + | chr1_2:126668-126687 | Msa0048090:intron | 25.0% |
| ! | ATAGTATTAACATTATTGGG+AGG | + | chr1_2:126797-126816 | Msa0048090:intron | 25.0% |
| !!! | GCAATTTTTTTGCAAAGATA+AGG | - | chr1_2:127030-127049 | None:intergenic | 25.0% |
| ! | TTATGAATAATAACTTGGCA+TGG | - | chr1_2:127235-127254 | None:intergenic | 25.0% |
| ! | AGAGGTTATGAATAATAACT+TGG | - | chr1_2:127240-127259 | None:intergenic | 25.0% |
| !! | TGATATTTGCTGAAATTGAT+TGG | - | chr1_2:127297-127316 | None:intergenic | 25.0% |
| !!! | TTCTATTTTAACTTGTTTGG+GGG | - | chr1_2:127563-127582 | None:intergenic | 25.0% |
| !!! | TCTTTGGAGTTAAAGATTTA+CGG | + | chr1_2:127787-127806 | Msa0048090:intron | 25.0% |
| !! | TTATCTTGATAACCAATATC+AGG | + | chr1_2:128179-128198 | Msa0048090:intron | 25.0% |
| !! | TATCTTGATAACCAATATCA+GGG | + | chr1_2:128180-128199 | Msa0048090:intron | 25.0% |
| !! | ATTTTCCAATTAGCAGTTAT+TGG | + | chr1_2:128295-128314 | Msa0048090:intron | 25.0% |
| !! | TTCTATCGATTGATTTATAG+AGG | + | chr1_2:128387-128406 | Msa0048090:intron | 25.0% |
| ! | TTCAAGAACTATAAAAAGGT+TGG | + | chr1_2:128607-128626 | Msa0048090:CDS | 25.0% |
| !! | AAAACTTTTAGATGGTTTCT+CGG | - | chr1_2:128737-128756 | None:intergenic | 25.0% |
| !! | AACATCAGAAAACTTTTAGA+TGG | - | chr1_2:128745-128764 | None:intergenic | 25.0% |
| !! | AAAGTTTTCTGATGTTTGTT+TGG | + | chr1_2:128749-128768 | Msa0048090:CDS | 25.0% |
| !! | AAGTTTTCTGATGTTTGTTT+GGG | + | chr1_2:128750-128769 | Msa0048090:CDS | 25.0% |
| !! | AAATTTTATCAACCACCATA+TGG | - | chr1_2:129662-129681 | None:intergenic | 25.0% |
| !!! | ATATGGTGGTTGATAAAATT+TGG | + | chr1_2:129661-129680 | Msa0048090:CDS | 25.0% |
| ! | AATCTCTGATTTCAACTTAT+CGG | - | chr1_2:129727-129746 | None:intergenic | 25.0% |
| ! | ATTGTGAATGACATTATAGA+TGG | + | chr1_2:130098-130117 | Msa0048090:CDS | 25.0% |
| !!! | TAGTAATTATTGGTTTACCA+TGG | + | chr1_2:130702-130721 | Msa0048090:intron | 25.0% |
| !! | GGTTAATTGAATCTTGTTTA+AGG | + | chr1_2:130774-130793 | Msa0048090:intron | 25.0% |
| ! | AAACATTTACAAGGTACAAA+AGG | - | chr1_2:131035-131054 | None:intergenic | 25.0% |
| ! | AGAAAAATGCTTGATTCTTA+GGG | - | chr1_2:131102-131121 | None:intergenic | 25.0% |
| ! | AAGAAAAATGCTTGATTCTT+AGG | - | chr1_2:131103-131122 | None:intergenic | 25.0% |
| ! | AAATGCTGATGTCATTATAA+TGG | + | chr1_2:131273-131292 | Msa0048090:CDS | 25.0% |
| ! | ATCTTCTTTGTCTGTTATAT+AGG | - | chr1_2:131983-132002 | None:intergenic | 25.0% |
| ! | TATAAAAATGCCAGAATAGT+TGG | - | chr1_2:132188-132207 | None:intergenic | 25.0% |
| ! | ACAAAGTAAGCTTAAGAAAT+TGG | - | chr1_2:132517-132536 | None:intergenic | 25.0% |
| ! | GAAAAGATAAACATATTCAG+AGG | + | chr1_2:132591-132610 | Msa0048090:CDS | 25.0% |
| !! | CAAAAACATGGATGAAATTT+TGG | + | chr1_2:132895-132914 | Msa0048090:three_prime_UTR | 25.0% |
| ! | TTATCCTACCAAAAATACTT+TGG | - | chr1_2:132997-133016 | None:intergenic | 25.0% |
| !!! | AAGTATTTTTGGTAGGATAA+AGG | + | chr1_2:132997-133016 | Msa0048090:three_prime_UTR | 25.0% |
| ! | ATTTTCCAATCAGCAGTTAT+TGG | + | chr1_2:123961-123980 | Msa0048090:five_prime_UTR | 30.0% |
| ! | TTTTTCCAATAACTGCTGAT+TGG | - | chr1_2:123969-123988 | None:intergenic | 30.0% |
| ! | ATCGAATCGATTCAAAAGAT+AGG | - | chr1_2:124034-124053 | None:intergenic | 30.0% |
| ! | TCGATTGATTTATAGAGAAG+TGG | + | chr1_2:124049-124068 | Msa0048090:five_prime_UTR | 30.0% |
| ! | GATTTTAAGCGAATTCAAAC+TGG | + | chr1_2:124083-124102 | Msa0048090:five_prime_UTR | 30.0% |
| TATTGGTATACCTGAATTCA+AGG | + | chr1_2:124125-124144 | Msa0048090:intron | 30.0% | |
| GAAAAACAGATTGAAATCGA+TGG | + | chr1_2:124263-124282 | Msa0048090:exon | 30.0% | |
| AGAAAAGCAGAAGAAAATTC+AGG | + | chr1_2:124431-124450 | Msa0048090:CDS | 30.0% | |
| !! | CTAATTCACTTTTGGTTGAA+CGG | + | chr1_2:124589-124608 | Msa0048090:intron | 30.0% |
| !!! | GGGACACTTTTTTTAGTAAA+TGG | + | chr1_2:124915-124934 | Msa0048090:intron | 30.0% |
| ATTATATGACCATCCAAACA+TGG | - | chr1_2:125083-125102 | None:intergenic | 30.0% | |
| CTTGTGGTGAGATAATAATA+TGG | - | chr1_2:125403-125422 | None:intergenic | 30.0% | |
| !!! | CACAAGACTTTTTAATTTGC+CGG | + | chr1_2:125417-125436 | Msa0048090:intron | 30.0% |
| !!! | ACAAGACTTTTTAATTTGCC+GGG | + | chr1_2:125418-125437 | Msa0048090:intron | 30.0% |
| ! | AATAATGGAGGAAATATACC+CGG | - | chr1_2:125439-125458 | None:intergenic | 30.0% |
| TTCCTCCATTATTATTGACA+TGG | + | chr1_2:125446-125465 | Msa0048090:intron | 30.0% | |
| AACCATGTCAATAATAATGG+AGG | - | chr1_2:125451-125470 | None:intergenic | 30.0% | |
| TAATCATAAAATGAACTGGC+TGG | + | chr1_2:125470-125489 | Msa0048090:intron | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | - | chr1_2:125630-125649 | None:intergenic | 30.0% | |
| !!! | AACCACTTTTTGACAACTTT+TGG | - | chr1_2:125753-125772 | None:intergenic | 30.0% |
| ATCTATTAGGTACTCTATTG+GGG | + | chr1_2:125809-125828 | Msa0048090:intron | 30.0% | |
| !!! | CTCTATTGGGGAATTTTTTT+CGG | + | chr1_2:125821-125840 | Msa0048090:intron | 30.0% |
| !! | TACACTAAAAGCATTCACAA+TGG | - | chr1_2:126069-126088 | None:intergenic | 30.0% |
| CATCGAATCAAATTAAAAGG+AGG | + | chr1_2:126273-126292 | Msa0048090:intron | 30.0% | |
| TGTACTCCATAATTGTCAAA+CGG | + | chr1_2:126404-126423 | Msa0048090:intron | 30.0% | |
| TATTAACATTATTGGGAGGA+GGG | + | chr1_2:126801-126820 | Msa0048090:intron | 30.0% | |
| CTAAGCATGATAAAAATAGG+GGG | - | chr1_2:126987-127006 | None:intergenic | 30.0% | |
| CCTAAGCATGATAAAAATAG+GGG | - | chr1_2:126988-127007 | None:intergenic | 30.0% | |
| CCCTAAGCATGATAAAAATA+GGG | - | chr1_2:126989-127008 | None:intergenic | 30.0% | |
| !!! | CCCTATTTTTATCATGCTTA+GGG | + | chr1_2:126986-127005 | Msa0048090:intron | 30.0% |
| TCCCTAAGCATGATAAAAAT+AGG | - | chr1_2:126990-127009 | None:intergenic | 30.0% | |
| GTCAAAAAGATGACTAATGT+TGG | - | chr1_2:127536-127555 | None:intergenic | 30.0% | |
| !!! | TCTATTTTAACTTGTTTGGG+GGG | - | chr1_2:127562-127581 | None:intergenic | 30.0% |
| !!! | ACTCCATTTTTTAGAGAAAG+AGG | - | chr1_2:127814-127833 | None:intergenic | 30.0% |
| !! | TAGCATTGATAAAAGATTGC+AGG | + | chr1_2:127908-127927 | Msa0048090:intron | 30.0% |
| AATAATCTGCTTCCACTTTA+AGG | - | chr1_2:128057-128076 | None:intergenic | 30.0% | |
| ! | CTTTTCCAATAACTGCTAAT+TGG | - | chr1_2:128303-128322 | None:intergenic | 30.0% |
| AAGTATAAAGACATTGAGCT+GGG | - | chr1_2:128442-128461 | None:intergenic | 30.0% | |
| AAAGTATAAAGACATTGAGC+TGG | - | chr1_2:128443-128462 | None:intergenic | 30.0% | |
| ! | TTTCTTTGTTATGCAGCTAT+TGG | + | chr1_2:128493-128512 | Msa0048090:intron | 30.0% |
| ! | TTTTCTGATACCTTGAATTC+AGG | - | chr1_2:128523-128542 | None:intergenic | 30.0% |
| ATAGTAGGCAAGAGATTTAT+GGG | + | chr1_2:128698-128717 | Msa0048090:CDS | 30.0% | |
| CTTAACACTGATCATTCTAA+TGG | + | chr1_2:128786-128805 | Msa0048090:CDS | 30.0% | |
| AGATTTCTATTCATGTTACC+AGG | + | chr1_2:128977-128996 | Msa0048090:CDS | 30.0% | |
| GATTTCTATTCATGTTACCA+GGG | + | chr1_2:128978-128997 | Msa0048090:CDS | 30.0% | |
| GAAGGTTTCAATTTATGACT+TGG | + | chr1_2:129014-129033 | Msa0048090:CDS | 30.0% | |
| !! | TCAATTTATGACTTGGTAGT+TGG | + | chr1_2:129021-129040 | Msa0048090:CDS | 30.0% |
| GATATAGTTCATTTGTCAAC+TGG | + | chr1_2:129045-129064 | Msa0048090:CDS | 30.0% | |
| ATTGATGAATCAAGTTTGTC+AGG | + | chr1_2:129117-129136 | Msa0048090:CDS | 30.0% | |
| AAGATGATAGTTACAACTGT+TGG | + | chr1_2:129216-129235 | Msa0048090:CDS | 30.0% | |
| GCTACAGTAATTGGTAAAAT+CGG | + | chr1_2:129327-129346 | Msa0048090:CDS | 30.0% | |
| GTGATTGAAAAAGCAGTTAA+TGG | + | chr1_2:129396-129415 | Msa0048090:CDS | 30.0% | |
| GAAGTAGTTAAAGACAAAGA+AGG | + | chr1_2:129801-129820 | Msa0048090:CDS | 30.0% | |
| GAATCAGCAATATTGGAATT+TGG | + | chr1_2:129852-129871 | Msa0048090:CDS | 30.0% | |
| ATCAAAGTATATCCATTCTC+CGG | - | chr1_2:130200-130219 | None:intergenic | 30.0% | |
| ! | ATATACTTTGATAGCCATTG+TGG | + | chr1_2:130208-130227 | Msa0048090:CDS | 30.0% |
| ! | TATACTTTGATAGCCATTGT+GGG | + | chr1_2:130209-130228 | Msa0048090:CDS | 30.0% |
| CGATAACATAAATACAGCTA+AGG | + | chr1_2:130316-130335 | Msa0048090:CDS | 30.0% | |
| ! | ATTGATATGGTTTCAGGTAA+TGG | + | chr1_2:130518-130537 | Msa0048090:intron | 30.0% |
| TAATTACTAGAGACAAACCT+CGG | - | chr1_2:130691-130710 | None:intergenic | 30.0% | |
| GGTTTGTCTCTAGTAATTAT+TGG | + | chr1_2:130692-130711 | Msa0048090:intron | 30.0% | |
| AACATGTGGAAACATTTACA+AGG | - | chr1_2:131044-131063 | None:intergenic | 30.0% | |
| AATAACATGTAGCAAACATG+TGG | - | chr1_2:131058-131077 | None:intergenic | 30.0% | |
| ! | TCCTAAAAAGTTATGGCTTT+TGG | + | chr1_2:131130-131149 | Msa0048090:intron | 30.0% |
| ! | CCTAAAAAGTTATGGCTTTT+GGG | + | chr1_2:131131-131150 | Msa0048090:intron | 30.0% |
| AGGGATTAATATAACATAGG+TGG | - | chr1_2:131198-131217 | None:intergenic | 30.0% | |
| ! | CCTGAAAAAGGTGTAATTTA+AGG | - | chr1_2:131243-131262 | None:intergenic | 30.0% |
| ! | CCTTAAATTACACCTTTTTC+AGG | + | chr1_2:131240-131259 | Msa0048090:intron | 30.0% |
| ! | AATGACATCAGCATTTTCTT+TGG | - | chr1_2:131269-131288 | None:intergenic | 30.0% |
| TATTGTCAAAGTGGCAAAAT+GGG | + | chr1_2:131312-131331 | Msa0048090:CDS | 30.0% | |
| CATAGTATTCAACATTTCAG+TGG | - | chr1_2:131464-131483 | None:intergenic | 30.0% | |
| !! | GTTTTATTACCAAACCAATG+TGG | + | chr1_2:131656-131675 | Msa0048090:CDS | 30.0% |
| !!! | CTTGGAGTTCTAAATTTTGA+GGG | + | chr1_2:131718-131737 | Msa0048090:CDS | 30.0% |
| !!! | TTGGAGTTCTAAATTTTGAG+GGG | + | chr1_2:131719-131738 | Msa0048090:CDS | 30.0% |
| ! | ACACATTTTAAATACCGAAC+CGG | + | chr1_2:131870-131889 | Msa0048090:intron | 30.0% |
| TTGTCTGTTATATAGGCATT+AGG | - | chr1_2:131976-131995 | None:intergenic | 30.0% | |
| CGTTAACACGTAATAACAAA+TGG | - | chr1_2:132246-132265 | None:intergenic | 30.0% | |
| !! | ACAATGTTACTGTAGTTTTG+TGG | + | chr1_2:132312-132331 | Msa0048090:intron | 30.0% |
| AGATACAAGAGTAGAATACT+AGG | - | chr1_2:132347-132366 | None:intergenic | 30.0% | |
| GTATTCTACTCTTGTATCTA+TGG | + | chr1_2:132348-132367 | Msa0048090:intron | 30.0% | |
| GGAAAATTGATAGATCATAG+AGG | - | chr1_2:132442-132461 | None:intergenic | 30.0% | |
| ! | TTTTCCTTTTGTCTTTTACC+AGG | + | chr1_2:132539-132558 | Msa0048090:intron | 30.0% |
| !! | TGGTTACTCAGTTTGTTATT+TGG | + | chr1_2:132729-132748 | Msa0048090:CDS | 30.0% |
| !! | TGTTTTTGCACAACAGAAAA+TGG | - | chr1_2:132883-132902 | None:intergenic | 30.0% |
| ! | TTTTCTGTTGTGCAAAAACA+TGG | + | chr1_2:132883-132902 | Msa0048090:three_prime_UTR | 30.0% |
| !! | GTTTTTGAGAAACTATCTCA+CGG | + | chr1_2:132938-132957 | Msa0048090:three_prime_UTR | 30.0% |
| AAAATACTTTGGTGAGAAGT+TGG | - | chr1_2:132986-133005 | None:intergenic | 30.0% | |
| !! | ACTTCTCACCAAAGTATTTT+TGG | + | chr1_2:132986-133005 | Msa0048090:three_prime_UTR | 30.0% |
| TTCTTCTGATAACCAACATC+AGG | + | chr1_2:123837-123856 | Msa0048090:five_prime_UTR | 35.0% | |
| TCTTCTGATAACCAACATCA+GGG | + | chr1_2:123838-123857 | Msa0048090:five_prime_UTR | 35.0% | |
| ! | TGGTTTTCTTATGCAGCTAT+TGG | + | chr1_2:124108-124127 | Msa0048090:five_prime_UTR | 35.0% |
| TGAAAGGATACCTTGAATTC+AGG | - | chr1_2:124138-124157 | None:intergenic | 35.0% | |
| AGAAACGAAACGAAACGAAA+AGG | - | chr1_2:124170-124189 | None:intergenic | 35.0% | |
| !!! | AACCTAGCTTTGGTTTTGTA+TGG | + | chr1_2:124217-124236 | Msa0048090:five_prime_UTR | 35.0% |
| AACCATACAAAACCAAAGCT+AGG | - | chr1_2:124222-124241 | None:intergenic | 35.0% | |
| AACAGATTGAAATCGATGGA+AGG | + | chr1_2:124267-124286 | Msa0048090:exon | 35.0% | |
| ATCGATGGAAGGTTATCTTA+AGG | + | chr1_2:124278-124297 | Msa0048090:exon | 35.0% | |
| AGGATTCTTGACCAAAGTAA+CGG | - | chr1_2:124361-124380 | None:intergenic | 35.0% | |
| AAATTATGTGTGCAGACACA+TGG | + | chr1_2:124680-124699 | Msa0048090:intron | 35.0% | |
| AATTATGTGTGCAGACACAT+GGG | + | chr1_2:124681-124700 | Msa0048090:intron | 35.0% | |
| TCTGTGTGAAAAACCAAACT+CGG | - | chr1_2:124761-124780 | None:intergenic | 35.0% | |
| AGTAAATGGGTCAGATATTC+CGG | + | chr1_2:124929-124948 | Msa0048090:intron | 35.0% | |
| ! | GTTGTATAACTTGTGTCTCA+TGG | + | chr1_2:125363-125382 | Msa0048090:intron | 35.0% |
| CGGCAAATTAAAAAGTCTTG+TGG | - | chr1_2:125419-125438 | None:intergenic | 35.0% | |
| AGAGAGAAAAAAGAAGAGAG+AGG | + | chr1_2:125691-125710 | Msa0048090:intron | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | + | chr1_2:125748-125767 | Msa0048090:intron | 35.0% | |
| TTGATAAGGTCCAATGCAAA+AGG | - | chr1_2:126186-126205 | None:intergenic | 35.0% | |
| TCAACCATGTTCACTATTGA+CGG | + | chr1_2:126250-126269 | Msa0048090:intron | 35.0% | |
| ! | CGGCATCGAATCAAATTAAA+AGG | + | chr1_2:126270-126289 | Msa0048090:intron | 35.0% |
| GTACTCCATAATTGTCAAAC+GGG | + | chr1_2:126405-126424 | Msa0048090:intron | 35.0% | |
| TACTCCATAATTGTCAAACG+GGG | + | chr1_2:126406-126425 | Msa0048090:intron | 35.0% | |
| ! | TGAATCATAGCAGCATTGAA+GGG | - | chr1_2:126557-126576 | None:intergenic | 35.0% |
| ! | TTGAATCATAGCAGCATTGA+AGG | - | chr1_2:126558-126577 | None:intergenic | 35.0% |
| GCGCAAATCAAAATTACACA+TGG | - | chr1_2:126706-126725 | None:intergenic | 35.0% | |
| GTATTAACATTATTGGGAGG+AGG | + | chr1_2:126800-126819 | Msa0048090:intron | 35.0% | |
| ATTAACATTATTGGGAGGAG+GGG | + | chr1_2:126802-126821 | Msa0048090:intron | 35.0% | |
| !!! | CCCCTATTTTTATCATGCTT+AGG | + | chr1_2:126985-127004 | Msa0048090:intron | 35.0% |
| ! | CTTAGGGAAATATGCTCTTT+TGG | + | chr1_2:127002-127021 | Msa0048090:intron | 35.0% |
| TCAGCATAGTTGGGAAAATT+AGG | + | chr1_2:127085-127104 | Msa0048090:intron | 35.0% | |
| AGGGATCAAAATTGCTACAA+CGG | + | chr1_2:127133-127152 | Msa0048090:intron | 35.0% | |
| !! | GATTGGCTTAAATGCATGTT+CGG | - | chr1_2:127172-127191 | None:intergenic | 35.0% |
| TGGCAGTATGCAAAATAGAT+TGG | - | chr1_2:127189-127208 | None:intergenic | 35.0% | |
| ATACTGCCAAAAACGAAGTT+TGG | + | chr1_2:127200-127219 | Msa0048090:intron | 35.0% | |
| !!! | TGCAGGTCCTATTTTTTATG+TGG | - | chr1_2:127267-127286 | None:intergenic | 35.0% |
| ACATAAAAAATAGGACCTGC+AGG | + | chr1_2:127266-127285 | Msa0048090:intron | 35.0% | |
| CCAAAGAAGCAATTAGCAAA+TGG | - | chr1_2:127774-127793 | None:intergenic | 35.0% | |
| ! | CCATTTGCTAATTGCTTCTT+TGG | + | chr1_2:127771-127790 | Msa0048090:intron | 35.0% |
| ! | GGTCCTCTTTCTCTAAAAAA+TGG | + | chr1_2:127808-127827 | Msa0048090:intron | 35.0% |
| CATTGTCAGAATCCTTAAAG+TGG | + | chr1_2:128042-128061 | Msa0048090:intron | 35.0% | |
| ! | TCGATTGATTTATAGAGGAG+TGG | + | chr1_2:128392-128411 | Msa0048090:intron | 35.0% |
| AGTATAAAGACATTGAGCTG+GGG | - | chr1_2:128441-128460 | None:intergenic | 35.0% | |
| TTCCATAAGCTAATTCAGAC+TGG | + | chr1_2:128464-128483 | Msa0048090:intron | 35.0% | |
| TATTGGTACACCTGAATTCA+AGG | + | chr1_2:128510-128529 | Msa0048090:CDS | 35.0% | |
| ACAACTGATGCAATATCATC+CGG | - | chr1_2:128574-128593 | None:intergenic | 35.0% | |
| !! | AAAAAGGTTGGTGAAGTTCA+AGG | + | chr1_2:128619-128638 | Msa0048090:CDS | 35.0% |
| !! | AAAAGGTTGGTGAAGTTCAA+GGG | + | chr1_2:128620-128639 | Msa0048090:CDS | 35.0% |
| GTCAAGACAGTATACATAGT+AGG | + | chr1_2:128683-128702 | Msa0048090:CDS | 35.0% | |
| CATAGTAGGCAAGAGATTTA+TGG | + | chr1_2:128697-128716 | Msa0048090:CDS | 35.0% | |
| TAGATGGTTTCTCGGTATAA+CGG | - | chr1_2:128729-128748 | None:intergenic | 35.0% | |
| ! | GTTTGTGCTTTAGTTTCCAT+AGG | + | chr1_2:128808-128827 | Msa0048090:CDS | 35.0% |
| ! | CTTTAGTTTCCATAGGCATA+GGG | + | chr1_2:128815-128834 | Msa0048090:CDS | 35.0% |
| ! | ACACCATCATAAACACCTTT+TGG | - | chr1_2:128859-128878 | None:intergenic | 35.0% |
| !! | AAAGGTGTTTATGATGGTGT+TGG | + | chr1_2:128859-128878 | Msa0048090:CDS | 35.0% |
| ATCTCTGCAGTTCTTAGATT+TGG | + | chr1_2:128939-128958 | Msa0048090:CDS | 35.0% | |
| TGAATGAAAATTCCATCAGC+TGG | - | chr1_2:129081-129100 | None:intergenic | 35.0% | |
| ! | GCTGATGGAATTTTCATTCA+TGG | + | chr1_2:129081-129100 | Msa0048090:CDS | 35.0% |
| CTTCGATTGTCTATATCTAC+AGG | - | chr1_2:129153-129172 | None:intergenic | 35.0% | |
| ! | TCGAAGACCTTTTCTTCTTT+CGG | + | chr1_2:129167-129186 | Msa0048090:CDS | 35.0% |
| AATGGAGTTGCTACAGTAAT+TGG | + | chr1_2:129318-129337 | Msa0048090:CDS | 35.0% | |
| AGACTAAGTGTTACAGCTAA+CGG | - | chr1_2:129519-129538 | None:intergenic | 35.0% | |
| TTTATCAACCACCATATGGT+TGG | - | chr1_2:129658-129677 | None:intergenic | 35.0% | |
| TTGGATATGTGAAAAGACTG+TGG | + | chr1_2:129680-129699 | Msa0048090:CDS | 35.0% | |
| ! | TCTGAAATATAGCCTGCAAA+AGG | - | chr1_2:129770-129789 | None:intergenic | 35.0% |
| AGAAGGAAAACAGACAATAC+TGG | + | chr1_2:129818-129837 | Msa0048090:CDS | 35.0% | |
| GAAGGAAAACAGACAATACT+GGG | + | chr1_2:129819-129838 | Msa0048090:CDS | 35.0% | |
| ACCAACAGAATCAGCAATAT+TGG | + | chr1_2:129845-129864 | Msa0048090:CDS | 35.0% | |
| !! | TCCAATATTGCTGATTCTGT+TGG | - | chr1_2:129849-129868 | None:intergenic | 35.0% |
| AGCAATATTGGAATTTGGCT+TGG | + | chr1_2:129857-129876 | Msa0048090:CDS | 35.0% | |
| ! | TAGATCCTGTAAGGTACTTA+AGG | + | chr1_2:129908-129927 | Msa0048090:CDS | 35.0% |
| TTCTTCCTGTCTGAATTGAA+AGG | - | chr1_2:129939-129958 | None:intergenic | 35.0% | |
| ACAATCTTTGCTTTCTCTTC+AGG | - | chr1_2:130083-130102 | None:intergenic | 35.0% | |
| AAGAGTTCTCAAAGCTTCAT+GGG | - | chr1_2:130129-130148 | None:intergenic | 35.0% | |
| AAAGAGTTCTCAAAGCTTCA+TGG | - | chr1_2:130130-130149 | None:intergenic | 35.0% | |
| !! | AGCTTTGAGAACTCTTTGTT+TGG | + | chr1_2:130133-130152 | Msa0048090:CDS | 35.0% |
| AAAGACATAGATGAAACCCA+AGG | + | chr1_2:130161-130180 | Msa0048090:CDS | 35.0% | |
| TCAAAGTATATCCATTCTCC+GGG | - | chr1_2:130199-130218 | None:intergenic | 35.0% | |
| GTTCAAAAATGTTTAGCAGC+AGG | + | chr1_2:130269-130288 | Msa0048090:CDS | 35.0% | |
| AGCTGTATTTATGTTATCGC+CGG | - | chr1_2:130315-130334 | None:intergenic | 35.0% | |
| AAGGCTATAGCTAAAGAATG+CGG | + | chr1_2:130335-130354 | Msa0048090:CDS | 35.0% | |
| GGATATCATACCTAGAATTC+AGG | + | chr1_2:130427-130446 | Msa0048090:CDS | 35.0% | |
| ACCAAACATATTCCTCAAAC+GGG | - | chr1_2:130580-130599 | None:intergenic | 35.0% | |
| CACCAAACATATTCCTCAAA+CGG | - | chr1_2:130581-130600 | None:intergenic | 35.0% | |
| ! | TTTGAGGAATATGTTTGGTG+AGG | + | chr1_2:130581-130600 | Msa0048090:CDS | 35.0% |
| ATTAACACTACGATTCACCA+TGG | - | chr1_2:130722-130741 | None:intergenic | 35.0% | |
| CTTGATTCTTAGGGAATAAC+TGG | - | chr1_2:131093-131112 | None:intergenic | 35.0% | |
| GAACGTGTCCTAAAAAGTTA+TGG | + | chr1_2:131123-131142 | Msa0048090:intron | 35.0% | |
| ! | CCCAAAAGCCATAACTTTTT+AGG | - | chr1_2:131134-131153 | None:intergenic | 35.0% |
| TTTCTTTGGCAACCTGAAAA+AGG | - | chr1_2:131255-131274 | None:intergenic | 35.0% | |
| CTTCACTACTATTGTCAAAG+TGG | + | chr1_2:131303-131322 | Msa0048090:CDS | 35.0% | |
| CTATTGTCAAAGTGGCAAAA+TGG | + | chr1_2:131311-131330 | Msa0048090:CDS | 35.0% | |
| ATTGTCAAAGTGGCAAAATG+GGG | + | chr1_2:131313-131332 | Msa0048090:CDS | 35.0% | |
| TAACTGCTGTTCAATTGCTT+TGG | + | chr1_2:131536-131555 | Msa0048090:CDS | 35.0% | |
| AACTGCTGTTCAATTGCTTT+GGG | + | chr1_2:131537-131556 | Msa0048090:CDS | 35.0% | |
| ! | GCTTTGGGTTAACTTGATTA+TGG | + | chr1_2:131552-131571 | Msa0048090:CDS | 35.0% |
| AACTTGATTATGGACACTCT+TGG | + | chr1_2:131562-131581 | Msa0048090:CDS | 35.0% | |
| CTTTCCATAAGTCCATCATT+AGG | - | chr1_2:131613-131632 | None:intergenic | 35.0% | |
| ! | AAACTTGCTTTCTTTCCAAC+TGG | - | chr1_2:131640-131659 | None:intergenic | 35.0% |
| TTATTACCAAACCAATGTGG+AGG | + | chr1_2:131659-131678 | Msa0048090:CDS | 35.0% | |
| TTGTATCAACTGATTGTCCT+TGG | + | chr1_2:131700-131719 | Msa0048090:CDS | 35.0% | |
| ! | CCTCAAAATTTAGAACTCCA+AGG | - | chr1_2:131720-131739 | None:intergenic | 35.0% |
| !!! | CCTTGGAGTTCTAAATTTTG+AGG | + | chr1_2:131717-131736 | Msa0048090:CDS | 35.0% |
| !! | TTCTAAATTTTGAGGGGAAG+AGG | + | chr1_2:131725-131744 | Msa0048090:CDS | 35.0% |
| CATTACCTGGCAAAATACAA+AGG | - | chr1_2:131809-131828 | None:intergenic | 35.0% | |
| AACACCTGGTAAAAGACAAA+AGG | - | chr1_2:132546-132565 | None:intergenic | 35.0% | |
| TGTTTATCTCATTGAACACC+TGG | - | chr1_2:132560-132579 | None:intergenic | 35.0% | |
| AGTAATCATAGTTGAGTTCC+TGG | + | chr1_2:132668-132687 | Msa0048090:CDS | 35.0% | |
| GTAATCATAGTTGAGTTCCT+GGG | + | chr1_2:132669-132688 | Msa0048090:CDS | 35.0% | |
| TTTCAACTGGTATGCATTTG+AGG | - | chr1_2:132782-132801 | None:intergenic | 35.0% | |
| ! | AAAGCATCATGATGGTTATG+AGG | + | chr1_2:132815-132834 | Msa0048090:CDS | 35.0% |
| GAACAAAATCACACTCTTTC+AGG | - | chr1_2:132855-132874 | None:intergenic | 35.0% | |
| AAACTATCTCACGGAAAAAG+TGG | + | chr1_2:132947-132966 | Msa0048090:three_prime_UTR | 35.0% | |
| !!! | CTCACCAAAGTATTTTTGGT+AGG | + | chr1_2:132990-133009 | Msa0048090:three_prime_UTR | 35.0% |
| ACCAACATCAGGGAAAGTTT+CGG | + | chr1_2:123848-123867 | Msa0048090:five_prime_UTR | 40.0% | |
| ACCACAAGTCTTCTAGATCT+AGG | + | chr1_2:124005-124024 | Msa0048090:five_prime_UTR | 40.0% | |
| TCCTAGATCTAGAAGACTTG+TGG | - | chr1_2:124009-124028 | None:intergenic | 40.0% | |
| TAAGCGAATTCAAACTGGTC+TGG | + | chr1_2:124088-124107 | Msa0048090:five_prime_UTR | 40.0% | |
| TCATCACACTAACCTAGCTT+TGG | + | chr1_2:124207-124226 | Msa0048090:intron | 40.0% | |
| GGATTTCGAATTGGAAGACA+AGG | + | chr1_2:124299-124318 | Msa0048090:CDS | 40.0% | |
| AAAACCAAACTCGGATGTAC+CGG | - | chr1_2:124752-124771 | None:intergenic | 40.0% | |
| GTAAATGGGTCAGATATTCC+GGG | + | chr1_2:124930-124949 | Msa0048090:intron | 40.0% | |
| GAAGAAATGGTGTCCATGTT+TGG | + | chr1_2:125067-125086 | Msa0048090:intron | 40.0% | |
| AAATGGTGTCCATGTTTGGA+TGG | + | chr1_2:125071-125090 | Msa0048090:intron | 40.0% | |
| !! | TACTCTGGTTGGTTTGCTAT+TGG | - | chr1_2:125592-125611 | None:intergenic | 40.0% |
| !! | TCGGAAGTTTTCTAAGAGTG+AGG | + | chr1_2:125840-125859 | Msa0048090:intron | 40.0% |
| !! | CGGAAGTTTTCTAAGAGTGA+GGG | + | chr1_2:125841-125860 | Msa0048090:intron | 40.0% |
| ATTAGGTAAGTCATGACGAC+GGG | - | chr1_2:126126-126145 | None:intergenic | 40.0% | |
| CATTAGGTAAGTCATGACGA+CGG | - | chr1_2:126127-126146 | None:intergenic | 40.0% | |
| GACTAACAGGTTAGGACATT+AGG | - | chr1_2:126143-126162 | None:intergenic | 40.0% | |
| ! | TCTATCGGTCTAAGACTAAC+AGG | - | chr1_2:126156-126175 | None:intergenic | 40.0% |
| GCAAAAGGTGACAAGTCTAT+CGG | - | chr1_2:126171-126190 | None:intergenic | 40.0% | |
| ! | AGACTTGTCACCTTTTGCAT+TGG | + | chr1_2:126173-126192 | Msa0048090:intron | 40.0% |
| CTAACCCCGTTTGACAATTA+TGG | - | chr1_2:126413-126432 | None:intergenic | 40.0% | |
| CATAATTGTCAAACGGGGTT+AGG | + | chr1_2:126411-126430 | Msa0048090:intron | 40.0% | |
| ! | CTGGAGCCTTTTGTCAAAAA+TGG | + | chr1_2:126647-126666 | Msa0048090:intron | 40.0% |
| !! | TGATTTGCGCGTTTCTTTTG+TGG | + | chr1_2:126716-126735 | Msa0048090:intron | 40.0% |
| GCATAGTTGGGAAAATTAGG+AGG | + | chr1_2:127088-127107 | Msa0048090:intron | 40.0% | |
| TTGCTACAACGGCAAACATA+AGG | + | chr1_2:127144-127163 | Msa0048090:intron | 40.0% | |
| TGCTACAACGGCAAACATAA+GGG | + | chr1_2:127145-127164 | Msa0048090:intron | 40.0% | |
| ! | GTTCCACCAAACTTCGTTTT+TGG | - | chr1_2:127209-127228 | None:intergenic | 40.0% |
| TAAAAAATAGGACCTGCAGG+AGG | + | chr1_2:127269-127288 | Msa0048090:intron | 40.0% | |
| CCTAGCTAGTTAGTAACAAG+AGG | - | chr1_2:128020-128039 | None:intergenic | 40.0% | |
| CCTCTTGTTACTAACTAGCT+AGG | + | chr1_2:128017-128036 | Msa0048090:intron | 40.0% | |
| ACCAATATCAGGGAAAGCTT+CGG | + | chr1_2:128190-128209 | Msa0048090:intron | 40.0% | |
| ! | ACTGCATTTTACGGATGGTA+AGG | + | chr1_2:128239-128258 | Msa0048090:intron | 40.0% |
| ACCACAAGTCTTCTAGATCT+AGG | + | chr1_2:124005-124024 | Msa0048090:five_prime_UTR | 40.0% | |
| TCCTAGATCTAGAAGACTTG+TGG | - | chr1_2:124009-124028 | None:intergenic | 40.0% | |
| GTATAAAGACATTGAGCTGG+GGG | - | chr1_2:128440-128459 | None:intergenic | 40.0% | |
| ! | GACCAGTCTGAATTAGCTTA+TGG | - | chr1_2:128469-128488 | None:intergenic | 40.0% |
| ! | TAAGCTAATTCAGACTGGTC+TGG | + | chr1_2:128469-128488 | Msa0048090:intron | 40.0% |
| ! | GCTTTAGTTTCCATAGGCAT+AGG | + | chr1_2:128814-128833 | Msa0048090:CDS | 40.0% |
| !! | TGGCCAAAAGGTGTTTATGA+TGG | + | chr1_2:128853-128872 | Msa0048090:CDS | 40.0% |
| TCTATTCATGTTACCAGGGA+TGG | + | chr1_2:128982-129001 | Msa0048090:CDS | 40.0% | |
| ! | CGAAGACCTTTTCTTCTTTC+GGG | + | chr1_2:129168-129187 | Msa0048090:CDS | 40.0% |
| TTGGTTCCCGAAAGAAGAAA+AGG | - | chr1_2:129177-129196 | None:intergenic | 40.0% | |
| CTGATGGAAACTTTGAGTGA+GGG | + | chr1_2:129261-129280 | Msa0048090:CDS | 40.0% | |
| !! | TTTTGCTGTGCTGACGTTTT+TGG | + | chr1_2:129356-129375 | Msa0048090:CDS | 40.0% |
| TTAATGGAGACTTCGCTAGT+TGG | + | chr1_2:129412-129431 | Msa0048090:CDS | 40.0% | |
| ATAGTTGTTGCGATTCCTGA+AGG | + | chr1_2:129489-129508 | Msa0048090:CDS | 40.0% | |
| TCTTTCTGCTTGTGAGACTA+TGG | + | chr1_2:129587-129606 | Msa0048090:CDS | 40.0% | |
| CTTTCTGCTTGTGAGACTAT+GGG | + | chr1_2:129588-129607 | Msa0048090:CDS | 40.0% | |
| ! | TGCATTTGCACTGATAAGAC+AGG | + | chr1_2:129621-129640 | Msa0048090:CDS | 40.0% |
| GAAAAGACTGTGGAGATGAA+AGG | + | chr1_2:129690-129709 | Msa0048090:CDS | 40.0% | |
| !!! | AGTTCTAAGCATCCTTTTGC+AGG | + | chr1_2:129755-129774 | Msa0048090:CDS | 40.0% |
| !! | TTGGAATTTGGCTTGGTTTC+AGG | + | chr1_2:129864-129883 | Msa0048090:CDS | 40.0% |
| CTCAACCTTAAGTACCTTAC+AGG | - | chr1_2:129916-129935 | None:intergenic | 40.0% | |
| TTGAGCCTTTCAATTCAGAC+AGG | + | chr1_2:129931-129950 | Msa0048090:CDS | 40.0% | |
| TTCAGACAGGAAGAAGATGT+CGG | + | chr1_2:129944-129963 | Msa0048090:CDS | 40.0% | |
| AGAATGCGGTATACTTACTG+AGG | + | chr1_2:130349-130368 | Msa0048090:CDS | 40.0% | |
| GAATGCGGTATACTTACTGA+GGG | + | chr1_2:130350-130369 | Msa0048090:CDS | 40.0% | |
| GAGAACAGAACCTGAATTCT+AGG | - | chr1_2:130440-130459 | None:intergenic | 40.0% | |
| ACCCGTTTGAGGAATATGTT+TGG | + | chr1_2:130576-130595 | Msa0048090:CDS | 40.0% | |
| ACTACATAAGAACAGTGCAG+TGG | - | chr1_2:130753-130772 | None:intergenic | 40.0% | |
| CTGCACTGTTCTTATGTAGT+TGG | + | chr1_2:130753-130772 | Msa0048090:intron | 40.0% | |
| AGCAATTGAACAGCAGTTAG+TGG | - | chr1_2:131535-131554 | None:intergenic | 40.0% | |
| !! | ACCTCCTAATGATGGACTTA+TGG | + | chr1_2:131606-131625 | Msa0048090:CDS | 40.0% |
| TCCATAAGTCCATCATTAGG+AGG | - | chr1_2:131610-131629 | None:intergenic | 40.0% | |
| CTTATGGAAAGACAACCAGT+TGG | + | chr1_2:131622-131641 | Msa0048090:CDS | 40.0% | |
| ! | GATATTCCTCCACATTGGTT+TGG | - | chr1_2:131668-131687 | None:intergenic | 40.0% |
| CCAATGTGGAGGAATATCTT+CGG | + | chr1_2:131670-131689 | Msa0048090:CDS | 40.0% | |
| TGAGTACAGCAGTTGAATCT+GGG | - | chr1_2:131768-131787 | None:intergenic | 40.0% | |
| TTGAGTACAGCAGTTGAATC+TGG | - | chr1_2:131769-131788 | None:intergenic | 40.0% | |
| ! | CAACTCCTTTGTATTTTGCC+AGG | + | chr1_2:131801-131820 | Msa0048090:intron | 40.0% |
| GGCATTAGGCAGTTTGATTA+TGG | - | chr1_2:131962-131981 | None:intergenic | 40.0% | |
| GAGGATTTCACCAACTATTC+TGG | + | chr1_2:132175-132194 | Msa0048090:intron | 40.0% | |
| TGCGTCACACCTAGTATTTA+AGG | - | chr1_2:132463-132482 | None:intergenic | 40.0% | |
| GATTACTTGAAATACCGCTG+TGG | - | chr1_2:132655-132674 | None:intergenic | 40.0% | |
| CATTTGAGGATAGCAGCTAA+AGG | - | chr1_2:132768-132787 | None:intergenic | 40.0% | |
| GTTGTGGTATCTCTTTCAAC+TGG | - | chr1_2:132795-132814 | None:intergenic | 40.0% | |
| ! | ACCACAACAAAGCATCATGA+TGG | + | chr1_2:132807-132826 | Msa0048090:CDS | 40.0% |
| ! | ACCATCATGATGCTTTGTTG+TGG | - | chr1_2:132811-132830 | None:intergenic | 40.0% |
| ! | CTTTGATGTGCTACACGTTT+TGG | + | chr1_2:133036-133055 | Msa0048090:three_prime_UTR | 40.0% |
| TCAATCTGTAGCTGCAAAAG+TGG | - | chr1_2:133168-133187 | None:intergenic | 40.0% | |
| CCAACATCAGGGAAAGTTTC+GGG | + | chr1_2:123849-123868 | Msa0048090:five_prime_UTR | 45.0% | |
| ! | CAGAGCAGCACTGCATTTTA+CGG | + | chr1_2:123893-123912 | Msa0048090:five_prime_UTR | 45.0% |
| ! | GCATTTTACGGCGGATGTTA+AGG | + | chr1_2:123905-123924 | Msa0048090:five_prime_UTR | 45.0% |
| CAATCGAAGCTCTCACTAGA+TGG | + | chr1_2:124328-124347 | Msa0048090:CDS | 45.0% | |
| ATGGAGAACTGCCGTTACTT+TGG | + | chr1_2:124347-124366 | Msa0048090:CDS | 45.0% | |
| CTTTGGTCAAGAATCCTCGT+CGG | + | chr1_2:124364-124383 | Msa0048090:CDS | 45.0% | |
| TTCTTGAGCTAGAGCACGTT+TGG | - | chr1_2:124415-124434 | None:intergenic | 45.0% | |
| GTTGTTTATTCCCTCCATCC+CGG | + | chr1_2:124730-124749 | Msa0048090:intron | 45.0% | |
| AAACCAAACTCGGATGTACC+GGG | - | chr1_2:124751-124770 | None:intergenic | 45.0% | |
| ! | ATTTTCACGTGCCTAGTGTG+TGG | + | chr1_2:125142-125161 | Msa0048090:intron | 45.0% |
| ACCACTAAGTACAGTAGTGC+TGG | - | chr1_2:125168-125187 | None:intergenic | 45.0% | |
| TTAGGTAAGTCATGACGACG+GGG | - | chr1_2:126125-126144 | None:intergenic | 45.0% | |
| ! | CGGTCTAAGACTAACAGGTT+AGG | - | chr1_2:126151-126170 | None:intergenic | 45.0% |
| GATGCCGTCAATAGTGAACA+TGG | - | chr1_2:126257-126276 | None:intergenic | 45.0% | |
| TTGTTACGTCGGCAAACACA+GGG | - | chr1_2:126958-126977 | None:intergenic | 45.0% | |
| ATTGTTACGTCGGCAAACAC+AGG | - | chr1_2:126959-126978 | None:intergenic | 45.0% | |
| GGGGGTCAAAATTGTTACGT+CGG | - | chr1_2:126969-126988 | None:intergenic | 45.0% | |
| TGCGATTATGACCCCTGTTT+AGG | + | chr1_2:127047-127066 | Msa0048090:intron | 45.0% | |
| ! | TGACCCCTGTTTAGGACATA+TGG | + | chr1_2:127055-127074 | Msa0048090:intron | 45.0% |
| CTGCCATATGTCCTAAACAG+GGG | - | chr1_2:127061-127080 | None:intergenic | 45.0% | |
| GCTGCCATATGTCCTAAACA+GGG | - | chr1_2:127062-127081 | None:intergenic | 45.0% | |
| AGCTGCCATATGTCCTAAAC+AGG | - | chr1_2:127063-127082 | None:intergenic | 45.0% | |
| GCTACAACGGCAAACATAAG+GGG | + | chr1_2:127146-127165 | Msa0048090:intron | 45.0% | |
| CTGCCAAAAACGAAGTTTGG+TGG | + | chr1_2:127203-127222 | Msa0048090:intron | 45.0% | |
| AATTGATTGGAACCTCCTGC+AGG | - | chr1_2:127284-127303 | None:intergenic | 45.0% | |
| CCAATATCAGGGAAAGCTTC+GGG | + | chr1_2:128191-128210 | Msa0048090:intron | 45.0% | |
| ! | ACGAGCAGCACTGCATTTTA+CGG | + | chr1_2:128230-128249 | Msa0048090:CDS | 45.0% |
| TCAGAAAAGACTAGAGCAGC+TGG | + | chr1_2:128535-128554 | Msa0048090:CDS | 45.0% | |
| !! | AAGACTAGAGCAGCTGGTTT+TGG | + | chr1_2:128541-128560 | Msa0048090:CDS | 45.0% |
| !!! | AGCTGGTTTTGGTATCGAAC+CGG | + | chr1_2:128552-128571 | Msa0048090:CDS | 45.0% |
| !! | CTTTCCGTCTCAGTTGATGA+AGG | + | chr1_2:128655-128674 | Msa0048090:CDS | 45.0% |
| GACACCTTCATCAACTGAGA+CGG | - | chr1_2:128662-128681 | None:intergenic | 45.0% | |
| ! | CTTCTGTCTTTTACCATCCC+TGG | - | chr1_2:128998-129017 | None:intergenic | 45.0% |
| CAGGGATGGTAAAAGACAGA+AGG | + | chr1_2:128996-129015 | Msa0048090:CDS | 45.0% | |
| TGTTGGCATGAGAACTGAGT+GGG | + | chr1_2:129233-129252 | Msa0048090:CDS | 45.0% | |
| GCTGATGGAAACTTTGAGTG+AGG | + | chr1_2:129260-129279 | Msa0048090:CDS | 45.0% | |
| ATGGAAACTTTGAGTGAGGG+AGG | + | chr1_2:129264-129283 | Msa0048090:CDS | 45.0% | |
| CCATTCAATTTCACCTGCAG+TGG | - | chr1_2:129303-129322 | None:intergenic | 45.0% | |
| CCACTGCAGGTGAAATTGAA+TGG | + | chr1_2:129300-129319 | Msa0048090:CDS | 45.0% | |
| !!! | CGTTTTTGGTCTTGACAGCA+AGG | + | chr1_2:129370-129389 | Msa0048090:CDS | 45.0% |
| ACAGCTAACGGTAATCCTTC+AGG | - | chr1_2:129507-129526 | None:intergenic | 45.0% | |
| AACGTTGACGACCAACCATA+TGG | + | chr1_2:129644-129663 | Msa0048090:CDS | 45.0% | |
| !! | GAATTTGGCTTGGTTTCAGG+TGG | + | chr1_2:129867-129886 | Msa0048090:CDS | 45.0% |
| !! | AAGAAGATGTCGGTGCTAGT+GGG | + | chr1_2:129954-129973 | Msa0048090:CDS | 45.0% |
| ATGCACCTTTGCAGAAAGCT+CGG | - | chr1_2:129998-130017 | None:intergenic | 45.0% | |
| ATATCCATTCTCCGGGATGT+TGG | - | chr1_2:130192-130211 | None:intergenic | 45.0% | |
| GATAGCCATTGTGGGAATCA+AGG | + | chr1_2:130217-130236 | Msa0048090:CDS | 45.0% | |
| AGGATCCTTGATTCCCACAA+TGG | - | chr1_2:130225-130244 | None:intergenic | 45.0% | |
| GAACAGCTTCCTTAACTCCA+GGG | - | chr1_2:130253-130272 | None:intergenic | 45.0% | |
| TGAACAGCTTCCTTAACTCC+AGG | - | chr1_2:130254-130273 | None:intergenic | 45.0% | |
| TCAGACAGATTGCGAAACTC+TGG | - | chr1_2:130395-130414 | None:intergenic | 45.0% | |
| AGAGTTTCGCAATCTGTCTG+AGG | + | chr1_2:130394-130413 | Msa0048090:CDS | 45.0% | |
| TCTGTCTGAGGAGCAAATGA+AGG | + | chr1_2:130406-130425 | Msa0048090:CDS | 45.0% | |
| ACCAAGGTATGCTTGTCAAG+AGG | - | chr1_2:130555-130574 | None:intergenic | 45.0% | |
| ! | ATACCTTGGTAACCCGTTTG+AGG | + | chr1_2:130565-130584 | Msa0048090:CDS | 45.0% |
| !! | ATTCCTCAAACGGGTTACCA+AGG | - | chr1_2:130571-130590 | None:intergenic | 45.0% |
| ! | GTTGTTGCTGTTACTGGTGA+TGG | + | chr1_2:130603-130622 | Msa0048090:CDS | 45.0% |
| TCAGACATTGGACTTGCCAT+GGG | + | chr1_2:130654-130673 | Msa0048090:CDS | 45.0% | |
| ! | CACCACTCTAAAAAGTGGAG+GGG | - | chr1_2:130888-130907 | None:intergenic | 45.0% |
| ! | CCACCACTCTAAAAAGTGGA+GGG | - | chr1_2:130889-130908 | None:intergenic | 45.0% |
| ! | TCCACCACTCTAAAAAGTGG+AGG | - | chr1_2:130890-130909 | None:intergenic | 45.0% |
| !!! | TCCACTTTTTAGAGTGGTGG+AGG | + | chr1_2:130889-130908 | Msa0048090:intron | 45.0% |
| TCAAAGTGGCAAAATGGGGA+CGG | + | chr1_2:131317-131336 | Msa0048090:CDS | 45.0% | |
| TTCGTTTCTGCATGCATCAC+TGG | + | chr1_2:131412-131431 | Msa0048090:CDS | 45.0% | |
| ! | TATGGACACTCTTGGTGCAT+TGG | + | chr1_2:131570-131589 | Msa0048090:CDS | 45.0% |
| GCTACTGAACCTCCTAATGA+TGG | + | chr1_2:131598-131617 | Msa0048090:CDS | 45.0% | |
| CCGAAGATATTCCTCCACAT+TGG | - | chr1_2:131673-131692 | None:intergenic | 45.0% | |
| ! | CGTTGATGAGACACATTACC+TGG | - | chr1_2:131822-131841 | None:intergenic | 45.0% |
| ! | AAGTGTTATTCTCGCCACAG+CGG | + | chr1_2:132638-132657 | Msa0048090:CDS | 45.0% |
| ACCAGAATTGCCAGGTTAGA+GGG | - | chr1_2:132713-132732 | None:intergenic | 45.0% | |
| AACCAGAATTGCCAGGTTAG+AGG | - | chr1_2:132714-132733 | None:intergenic | 45.0% | |
| ACTGAGTAACCAGAATTGCC+AGG | - | chr1_2:132721-132740 | None:intergenic | 45.0% | |
| !! | CTTTGGTGAGAAGTTGGTGT+GGG | - | chr1_2:132980-132999 | None:intergenic | 45.0% |
| !! | ACTTTGGTGAGAAGTTGGTG+TGG | - | chr1_2:132981-133000 | None:intergenic | 45.0% |
| !! | TTGAAAAATAAAAAATAAAA+AGG | - | chr1_2:124497-124516 | None:intergenic | 5.0% |
| !!! | TTATTAAATGATTTTTAATT+TGG | + | chr1_2:125022-125041 | Msa0048090:intron | 5.0% |
| CCCGAAACTTTCCCTGATGT+TGG | - | chr1_2:123852-123871 | None:intergenic | 50.0% | |
| ! | AGCAGCACTGCATTTTACGG+CGG | + | chr1_2:123896-123915 | Msa0048090:five_prime_UTR | 50.0% |
| TGCAGACACATGGGACACAT+GGG | + | chr1_2:124690-124709 | Msa0048090:intron | 50.0% | |
| ATGGGTCAGATATTCCGGGA+CGG | + | chr1_2:124934-124953 | Msa0048090:intron | 50.0% | |
| ATTAGATACTCCCTCCGTCC+CGG | - | chr1_2:124951-124970 | None:intergenic | 50.0% | |
| GCCAGCACTACTGTACTTAG+TGG | + | chr1_2:125164-125183 | Msa0048090:intron | 50.0% | |
| TGTCAAACGGGGTTAGGCAA+AGG | + | chr1_2:126417-126436 | Msa0048090:intron | 50.0% | |
| ! | CAGCATTGAAGGGAACAACG+TGG | - | chr1_2:126547-126566 | None:intergenic | 50.0% |
| ! | GCGCGTTTCTTTTGTGGCAT+AGG | + | chr1_2:126722-126741 | Msa0048090:intron | 50.0% |
| TGTTACGTCGGCAAACACAG+GGG | - | chr1_2:126957-126976 | None:intergenic | 50.0% | |
| TGGCAGCTTCTCAGCATAGT+TGG | + | chr1_2:127075-127094 | Msa0048090:intron | 50.0% | |
| GGCAGCTTCTCAGCATAGTT+GGG | + | chr1_2:127076-127095 | Msa0048090:intron | 50.0% | |
| CCCGAAGCTTTCCCTGATAT+TGG | - | chr1_2:128194-128213 | None:intergenic | 50.0% | |
| ! | GCAGCACTGCATTTTACGGA+TGG | + | chr1_2:128234-128253 | Msa0048090:CDS | 50.0% |
| TGTGGGAATCCCTATGCCTA+TGG | - | chr1_2:128827-128846 | None:intergenic | 50.0% | |
| GCATAGGGATTCCCACAGAA+GGG | + | chr1_2:128830-128849 | Msa0048090:CDS | 50.0% | |
| GGTGATCAAGTTCCAGCTGA+TGG | + | chr1_2:129066-129085 | Msa0048090:CDS | 50.0% | |
| TCGGGAACCAAAGTGCAAGA+TGG | + | chr1_2:129186-129205 | Msa0048090:CDS | 50.0% | |
| CGCTTGACCATCTTGCACTT+TGG | - | chr1_2:129196-129215 | None:intergenic | 50.0% | |
| CTGTTGGCATGAGAACTGAG+TGG | + | chr1_2:129232-129251 | Msa0048090:CDS | 50.0% | |
| GTTGGCATGAGAACTGAGTG+GGG | + | chr1_2:129234-129253 | Msa0048090:CDS | 50.0% | |
| AACTGAGTGGGGAAAGCTGA+TGG | + | chr1_2:129245-129264 | Msa0048090:CDS | 50.0% | |
| AGAAGATGAGACTCCACTGC+AGG | + | chr1_2:129287-129306 | Msa0048090:CDS | 50.0% | |
| !! | CTTCGCTAGTTGGTCTTCAG+AGG | + | chr1_2:129422-129441 | Msa0048090:CDS | 50.0% |
| GTTGACGACCAACCATATGG+TGG | + | chr1_2:129647-129666 | Msa0048090:CDS | 50.0% | |
| TGCACAGCGTAGATCCTGTA+AGG | + | chr1_2:129899-129918 | Msa0048090:CDS | 50.0% | |
| !! | GAAGAAGATGTCGGTGCTAG+TGG | + | chr1_2:129953-129972 | Msa0048090:CDS | 50.0% |
| ! | TAGTGGGTCTTCCTGATGGA+GGG | + | chr1_2:129970-129989 | Msa0048090:CDS | 50.0% |
| !! | CGGGATGTTGGTTTCTCCTT+GGG | - | chr1_2:130180-130199 | None:intergenic | 50.0% |
| CCAAGGAGAAACCAACATCC+CGG | + | chr1_2:130178-130197 | Msa0048090:CDS | 50.0% | |
| GAAACCAACATCCCGGAGAA+TGG | + | chr1_2:130185-130204 | Msa0048090:CDS | 50.0% | |
| AGCAGGAATAAGCGTTCGCA+TGG | + | chr1_2:130286-130305 | Msa0048090:CDS | 50.0% | |
| ATAAGCGTTCGCATGGTCAC+CGG | + | chr1_2:130293-130312 | Msa0048090:CDS | 50.0% | |
| TGCGGTATACTTACTGAGGG+AGG | + | chr1_2:130353-130372 | Msa0048090:CDS | 50.0% | |
| ! | GAGGGAGGTGTAGCTATAGA+AGG | + | chr1_2:130368-130387 | Msa0048090:CDS | 50.0% |
| GGTATGCTTGTCAAGAGGCA+AGG | - | chr1_2:130550-130569 | None:intergenic | 50.0% | |
| GCCTCTTGACAAGCATACCT+TGG | + | chr1_2:130551-130570 | Msa0048090:CDS | 50.0% | |
| ! | GGTGAGGTTGTTGCTGTTAC+TGG | + | chr1_2:130597-130616 | Msa0048090:CDS | 50.0% |
| GTCAGACATTGGACTTGCCA+TGG | + | chr1_2:130653-130672 | Msa0048090:CDS | 50.0% | |
| CTAGAGACAAACCTCGGTTC+CGG | - | chr1_2:130685-130704 | None:intergenic | 50.0% | |
| ! | CACTCTAAAAAGTGGAGGGG+AGG | - | chr1_2:130885-130904 | None:intergenic | 50.0% |
| !!! | CTCCCCTCCACTTTTTAGAG+TGG | + | chr1_2:130883-130902 | Msa0048090:intron | 50.0% |
| !!! | CCCTCCACTTTTTAGAGTGG+TGG | + | chr1_2:130886-130905 | Msa0048090:intron | 50.0% |
| ! | GCCTCCACCACTCTAAAAAG+TGG | - | chr1_2:130893-130912 | None:intergenic | 50.0% |
| CAAAGTGGCAAAATGGGGAC+GGG | + | chr1_2:131318-131337 | Msa0048090:CDS | 50.0% | |
| !! | CACTCTTGGTGCATTGGCTT+TGG | + | chr1_2:131576-131595 | Msa0048090:CDS | 50.0% |
| TACCGAACCGGACATCAAAC+CGG | + | chr1_2:131882-131901 | Msa0048090:intron | 50.0% | |
| ! | TCAGAGGCATGTTTGACAGC+TGG | + | chr1_2:132607-132626 | Msa0048090:CDS | 50.0% |
| TCCCTCTAACCTGGCAATTC+TGG | + | chr1_2:132709-132728 | Msa0048090:CDS | 50.0% | |
| CACACTCTTTCAGGACCAGA+AGG | - | chr1_2:132846-132865 | None:intergenic | 50.0% | |
| ! | GTGCTGCTCTGCTCGTTGAA+CGG | - | chr1_2:123884-123903 | None:intergenic | 55.0% |
| TGGTCAAGAATCCTCGTCGG+AGG | + | chr1_2:124367-124386 | Msa0048090:CDS | 55.0% | |
| ACGTTTCGAAACCTCCGACG+AGG | - | chr1_2:124381-124400 | None:intergenic | 55.0% | |
| GTGCAGACACATGGGACACA+TGG | + | chr1_2:124689-124708 | Msa0048090:intron | 55.0% | |
| GCAGACACATGGGACACATG+GGG | + | chr1_2:124691-124710 | Msa0048090:intron | 55.0% | |
| CAGACACATGGGACACATGG+GGG | + | chr1_2:124692-124711 | Msa0048090:intron | 55.0% | |
| AGACACATGGGACACATGGG+GGG | + | chr1_2:124693-124712 | Msa0048090:intron | 55.0% | |
| CAAACTCGGATGTACCGGGA+TGG | - | chr1_2:124747-124766 | None:intergenic | 55.0% | |
| CATCCCGGTACATCCGAGTT+TGG | + | chr1_2:124745-124764 | Msa0048090:intron | 55.0% | |
| GTCAGATATTCCGGGACGGA+GGG | + | chr1_2:124938-124957 | Msa0048090:intron | 55.0% | |
| !! | AGTAGTGCTGGCCACACACT+AGG | - | chr1_2:125156-125175 | None:intergenic | 55.0% |
| GGGTTGGACGGCAATTAACG+TGG | + | chr1_2:126623-126642 | Msa0048090:intron | 55.0% | |
| GGACGGCAATTAACGTGGTC+TGG | + | chr1_2:126628-126647 | Msa0048090:intron | 55.0% | |
| GTTACGTCGGCAAACACAGG+GGG | - | chr1_2:126956-126975 | None:intergenic | 55.0% | |
| ! | ATGCAGTGCTGCTCGTTGAG+CGG | - | chr1_2:128226-128245 | None:intergenic | 55.0% |
| GGCATAGGGATTCCCACAGA+AGG | + | chr1_2:128829-128848 | Msa0048090:CDS | 55.0% | |
| TAGGGATTCCCACAGAAGGG+TGG | + | chr1_2:128833-128852 | Msa0048090:CDS | 55.0% | |
| ! | CCTTTTGGCCACCCTTCTGT+GGG | - | chr1_2:128844-128863 | None:intergenic | 55.0% |
| ! | ACCTTTTGGCCACCCTTCTG+TGG | - | chr1_2:128845-128864 | None:intergenic | 55.0% |
| ! | GTGCTAGTGGGTCTTCCTGA+TGG | + | chr1_2:129966-129985 | Msa0048090:CDS | 55.0% |
| ! | CTAGTGGGTCTTCCTGATGG+AGG | + | chr1_2:129969-129988 | Msa0048090:CDS | 55.0% |
| AGTGGGTCTTCCTGATGGAG+GGG | + | chr1_2:129971-129990 | Msa0048090:CDS | 55.0% | |
| !! | CCGGGATGTTGGTTTCTCCT+TGG | - | chr1_2:130181-130200 | None:intergenic | 55.0% |
| ! | ATGTCTGACTCGTGCAGTGC+AGG | - | chr1_2:130642-130661 | None:intergenic | 55.0% |
| GCACTGCACGAGTCAGACAT+TGG | + | chr1_2:130642-130661 | Msa0048090:CDS | 55.0% | |
| ! | GGAGGGGAGGAAGTACAAGA+GGG | - | chr1_2:130872-130891 | None:intergenic | 55.0% |
| ! | TGGAGGGGAGGAAGTACAAG+AGG | - | chr1_2:130873-130892 | None:intergenic | 55.0% |
| !! | TTTTGAGGGGAAGAGGCTGC+TGG | + | chr1_2:131732-131751 | Msa0048090:CDS | 55.0% |
| TTTGAGGGGAAGAGGCTGCT+GGG | + | chr1_2:131733-131752 | Msa0048090:CDS | 55.0% | |
| AAGAGGCTGCTGGGACTAAG+TGG | + | chr1_2:131742-131761 | Msa0048090:CDS | 55.0% | |
| ATCAAACCGGCGAGACCTCT+GGG | + | chr1_2:131895-131914 | Msa0048090:intron | 55.0% | |
| GCAGCTGAACAATGACCCAG+AGG | - | chr1_2:131913-131932 | None:intergenic | 55.0% | |
| !! | CAGTGCTGGCAAATGTTCCC+AGG | - | chr1_2:132689-132708 | None:intergenic | 55.0% |
| !! | GGTTATGAGGCACTGCCTTC+TGG | + | chr1_2:132828-132847 | Msa0048090:CDS | 55.0% |
| ACATGGGACACATGGGGGGA+CGG | + | chr1_2:124697-124716 | Msa0048090:intron | 60.0% | |
| CTCGGATGTACCGGGATGGA+GGG | - | chr1_2:124743-124762 | None:intergenic | 60.0% | |
| ACTCGGATGTACCGGGATGG+AGG | - | chr1_2:124744-124763 | None:intergenic | 60.0% | |
| GGTCAGATATTCCGGGACGG+AGG | + | chr1_2:124937-124956 | Msa0048090:intron | 60.0% | |
| CCCACAGAAGGGTGGCCAAA+AGG | + | chr1_2:128841-128860 | Msa0048090:CDS | 60.0% | |
| AAAGCTCGGACCCCTCCATC+AGG | - | chr1_2:129984-130003 | None:intergenic | 60.0% | |
| GGGGTCCGAGCTTTCTGCAA+AGG | + | chr1_2:129990-130009 | Msa0048090:CDS | 60.0% | |
| ATCAAGGATCCTGTGCGCCC+TGG | + | chr1_2:130233-130252 | Msa0048090:CDS | 60.0% | |
| TCCTGTGCGCCCTGGAGTTA+AGG | + | chr1_2:130241-130260 | Msa0048090:CDS | 60.0% | |
| TCCTTAACTCCAGGGCGCAC+AGG | - | chr1_2:130245-130264 | None:intergenic | 60.0% | |
| !! | GTGCAGTGCAGGAGCATCGT+TGG | - | chr1_2:130631-130650 | None:intergenic | 60.0% |
| ! | GGACTTGCCATGGGCATTGC+CGG | + | chr1_2:130663-130682 | Msa0048090:CDS | 60.0% |
| !! | CGCCGGTTTGATGTCCGGTT+CGG | - | chr1_2:131887-131906 | None:intergenic | 60.0% |
| !! | GGTCTCGCCGGTTTGATGTC+CGG | - | chr1_2:131892-131911 | None:intergenic | 60.0% |
| CATCAAACCGGCGAGACCTC+TGG | + | chr1_2:131894-131913 | Msa0048090:intron | 60.0% | |
| CAATGACCCAGAGGTCTCGC+CGG | - | chr1_2:131904-131923 | None:intergenic | 60.0% | |
| CCAGGTTAGAGGGACAGTGC+TGG | - | chr1_2:132703-132722 | None:intergenic | 60.0% | |
| CCAGCACTGTCCCTCTAACC+TGG | + | chr1_2:132700-132719 | Msa0048090:CDS | 60.0% | |
| CTCGGTTCCGGCAATGCCCA+TGG | - | chr1_2:130673-130692 | None:intergenic | 65.0% | |
| ! | CATGGGCATTGCCGGAACCG+AGG | + | chr1_2:130671-130690 | Msa0048090:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 123774 | 133207 | 123774 | ID=Msa0048090;Name=Msa0048090 |
| chr1_2 | mRNA | 123774 | 133207 | 123774 | ID=Msa0048090-mRNA-1;Parent=Msa0048090;Name=Msa0048090-mRNA-1;_AED=0.08;_eAED=0.08;_QI=463|0.87|0.88|1|0.75|0.66|9|341|1019 |
| chr1_2 | exon | 123774 | 124142 | 123774 | ID=Msa0048090-mRNA-1:exon:0;Parent=Msa0048090-mRNA-1 |
| chr1_2 | exon | 124164 | 124191 | 124164 | ID=Msa0048090-mRNA-1:exon:1;Parent=Msa0048090-mRNA-1 |
| chr1_2 | exon | 124216 | 124452 | 124216 | ID=Msa0048090-mRNA-1:exon:2;Parent=Msa0048090-mRNA-1 |
| chr1_2 | exon | 128201 | 128255 | 128201 | ID=Msa0048090-mRNA-1:exon:3;Parent=Msa0048090-mRNA-1 |
| chr1_2 | exon | 128509 | 130448 | 128509 | ID=Msa0048090-mRNA-1:exon:4;Parent=Msa0048090-mRNA-1 |
| chr1_2 | exon | 130534 | 130692 | 130534 | ID=Msa0048090-mRNA-1:exon:5;Parent=Msa0048090-mRNA-1 |
| chr1_2 | exon | 131262 | 131433 | 131262 | ID=Msa0048090-mRNA-1:exon:6;Parent=Msa0048090-mRNA-1 |
| chr1_2 | exon | 131524 | 131780 | 131524 | ID=Msa0048090-mRNA-1:exon:7;Parent=Msa0048090-mRNA-1 |
| chr1_2 | exon | 132561 | 133207 | 132561 | ID=Msa0048090-mRNA-1:exon:8;Parent=Msa0048090-mRNA-1 |
| chr1_2 | five_prime_UTR | 123774 | 124142 | 123774 | ID=Msa0048090-mRNA-1:five_prime_utr;Parent=Msa0048090-mRNA-1 |
| chr1_2 | five_prime_UTR | 124164 | 124191 | 124164 | ID=Msa0048090-mRNA-1:five_prime_utr;Parent=Msa0048090-mRNA-1 |
| chr1_2 | five_prime_UTR | 124216 | 124281 | 124216 | ID=Msa0048090-mRNA-1:five_prime_utr;Parent=Msa0048090-mRNA-1 |
| chr1_2 | CDS | 124282 | 124452 | 124282 | ID=Msa0048090-mRNA-1:cds;Parent=Msa0048090-mRNA-1 |
| chr1_2 | CDS | 128201 | 128255 | 128201 | ID=Msa0048090-mRNA-1:cds;Parent=Msa0048090-mRNA-1 |
| chr1_2 | CDS | 128509 | 130448 | 128509 | ID=Msa0048090-mRNA-1:cds;Parent=Msa0048090-mRNA-1 |
| chr1_2 | CDS | 130534 | 130692 | 130534 | ID=Msa0048090-mRNA-1:cds;Parent=Msa0048090-mRNA-1 |
| chr1_2 | CDS | 131262 | 131433 | 131262 | ID=Msa0048090-mRNA-1:cds;Parent=Msa0048090-mRNA-1 |
| chr1_2 | CDS | 131524 | 131780 | 131524 | ID=Msa0048090-mRNA-1:cds;Parent=Msa0048090-mRNA-1 |
| chr1_2 | CDS | 132561 | 132866 | 132561 | ID=Msa0048090-mRNA-1:cds;Parent=Msa0048090-mRNA-1 |
| chr1_2 | three_prime_UTR | 132867 | 133207 | 132867 | ID=Msa0048090-mRNA-1:three_prime_utr;Parent=Msa0048090-mRNA-1 |
| Gene Sequence |
| Protein sequence |