AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0286810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0286810 MtrunA17_Chr2g0303701 97.378 572 12 2 1 572 1 569 0.0 1129
Msa0286810 MtrunA17_Chr2g0303731 74.826 576 136 6 1 572 1 571 0.0 884
Msa0286810 MtrunA17_Chr8g0376631 74.913 574 137 4 1 571 1 570 0.0 845
Msa0286810 MtrunA17_Chr8g0376601 71.350 548 149 5 1 545 1 543 0.0 776
Msa0286810 MtrunA17_Chr8g0376611 74.200 500 120 4 70 566 3 496 0.0 747
Msa0286810 MtrunA17_Chr2g0290181 58.201 567 227 4 2 562 3 565 0.0 649
Msa0286810 MtrunA17_Chr2g0290161 50.996 502 210 6 67 562 1 472 8.01e-162 470
Msa0286810 MtrunA17_Chr7g0214451 56.338 355 147 1 6 360 21 367 3.14e-131 392
Msa0286810 MtrunA17_Chr7g0214451 56.667 120 50 1 439 556 363 482 2.50e-38 147
Msa0286810 MtrunA17_Chr1g0213611 57.386 352 142 1 6 357 66 409 1.04e-129 390
Msa0286810 MtrunA17_Chr1g0213611 56.481 108 47 0 449 556 424 531 5.26e-36 141
Msa0286810 MtrunA17_Chr5g0434261 53.740 361 108 7 188 545 1 305 1.63e-123 366
Msa0286810 MtrunA17_Chr1g0213631 55.911 313 138 0 45 357 4 316 4.01e-112 342
Msa0286810 MtrunA17_Chr1g0213631 55.172 116 51 1 442 556 320 435 7.26e-36 140
Msa0286810 MtrunA17_Chr5g0434251 71.622 148 42 0 419 566 5 152 6.54e-78 243
Msa0286810 MtrunA17_Chr6g0450271 67.857 196 54 4 223 415 32 221 1.37e-74 238
Msa0286810 MtrunA17_Chr5g0434231 68.208 173 31 1 70 242 6 154 9.60e-73 229
Msa0286810 MtrunA17_Chr6g0450291 68.421 171 45 4 248 415 1 165 9.71e-64 207
Msa0286810 MtrunA17_Chr6g0450281 68.421 171 45 4 248 415 1 165 2.33e-63 206
Msa0286810 MtrunA17_Chr6g0450241 67.836 171 46 4 248 415 1 165 8.49e-63 204
Msa0286810 MtrunA17_Chr2g0282031 36.747 332 201 3 25 350 52 380 1.44e-57 201
Msa0286810 MtrunA17_Chr2g0282031 40.385 104 62 0 452 555 399 502 6.69e-15 77.4
Msa0286810 MtrunA17_Chr7g0250881 36.923 325 198 3 33 357 72 389 8.10e-56 196
Msa0286810 MtrunA17_Chr4g0036021 33.051 354 213 6 22 357 23 370 6.98e-55 194
Msa0286810 MtrunA17_Chr4g0036021 38.596 114 64 1 452 565 386 493 3.01e-12 69.3
Msa0286810 MtrunA17_Chr6g0457781 36.923 325 198 3 33 357 112 429 1.02e-54 194
Msa0286810 MtrunA17_Chr6g0485661 33.994 353 221 5 7 350 37 386 1.48e-51 184
Msa0286810 MtrunA17_Chr4g0034681 33.426 359 206 8 22 357 26 374 8.03e-51 182
Msa0286810 MtrunA17_Chr4g0034681 33.929 112 68 1 460 571 398 503 5.86e-11 65.1
Msa0286810 MtrunA17_Chr3g0121674 49.701 167 84 0 188 354 1 167 1.80e-50 176
Msa0286810 MtrunA17_Chr3g0121674 53.982 113 50 1 446 556 177 289 9.64e-37 139
Msa0286810 MtrunA17_Chr3g0144361 32.597 362 215 6 20 357 18 374 4.89e-50 180
Msa0286810 MtrunA17_Chr5g0432581 34.903 361 211 8 23 364 16 371 2.35e-49 178
Msa0286810 MtrunA17_Chr5g0432581 37.383 107 63 2 452 556 381 485 8.08e-13 70.9
Msa0286810 MtrunA17_Chr5g0394341 34.513 339 194 7 24 340 20 352 4.90e-49 177
Msa0286810 MtrunA17_Chr8g0373531 34.783 345 202 7 23 348 16 356 5.47e-48 174
Msa0286810 MtrunA17_Chr8g0373531 37.143 105 66 0 452 556 381 485 3.80e-14 75.1
Msa0286810 MtrunA17_Chr1g0164871 33.433 335 201 6 24 340 21 351 6.40e-48 174
Msa0286810 MtrunA17_Chr5g0437021 33.134 335 202 5 24 340 21 351 8.43e-48 174
Msa0286810 MtrunA17_Chr1g0164851 33.333 336 202 6 23 340 20 351 8.97e-48 174
Msa0286810 MtrunA17_Chr4g0021771 34.286 350 218 6 25 367 54 398 1.01e-47 174
Msa0286810 MtrunA17_Chr4g0021771 39.815 108 60 1 454 556 398 505 5.81e-15 77.8
Msa0286810 MtrunA17_Chr8g0390141 33.724 341 202 7 21 340 18 355 4.56e-47 172
Msa0286810 MtrunA17_Chr5g0434241 80.198 101 17 1 248 345 1 101 8.47e-47 159
Msa0286810 MtrunA17_Chr8g0390521 34.024 338 209 5 23 350 15 348 2.72e-46 170
Msa0286810 MtrunA17_Chr1g0205671 31.965 341 201 8 23 340 20 352 6.17e-46 169
Msa0286810 MtrunA17_Chr4g0048411 33.828 337 198 6 24 340 21 352 8.28e-46 169
Msa0286810 MtrunA17_Chr4g0032021 33.148 359 215 8 20 358 92 445 1.05e-45 169
Msa0286810 MtrunA17_Chr4g0032021 39.423 104 63 0 452 555 453 556 1.77e-14 76.3
Msa0286810 MtrunA17_Chr4g0048051 34.320 338 195 7 24 340 21 352 1.07e-45 168
Msa0286810 MtrunA17_Chr1g0205681 33.133 332 190 8 33 340 30 353 5.96e-45 166
Msa0286810 MtrunA17_Chr4g0065311 32.865 356 211 9 1 338 1 346 1.34e-44 165
Msa0286810 MtrunA17_Chr4g0039651 32.836 335 205 7 36 353 55 386 1.50e-44 165
Msa0286810 MtrunA17_Chr4g0039651 34.286 105 69 0 447 551 394 498 1.67e-11 66.6
Msa0286810 MtrunA17_Chr5g0417611 31.548 336 206 7 23 338 20 351 3.93e-43 161
Msa0286810 MtrunA17_Chr1g0205691 33.140 344 204 8 33 355 29 367 5.73e-43 161
Msa0286810 MtrunA17_Chr5g0445601 32.132 333 205 7 23 338 24 352 4.41e-42 158
Msa0286810 MtrunA17_Chr7g0257631 32.326 331 203 6 25 338 60 386 1.97e-41 157
Msa0286810 MtrunA17_Chr5g0420841 31.487 343 211 7 33 355 28 366 2.86e-41 156
Msa0286810 MtrunA17_Chr8g0390261 32.515 326 195 8 35 340 35 355 7.00e-41 155
Msa0286810 MtrunA17_Chr4g0065324 32.817 323 196 7 33 338 36 354 1.01e-39 151
Msa0286810 MtrunA17_Chr3g0085971 32.024 331 195 7 33 340 28 351 3.03e-39 150
Msa0286810 MtrunA17_Chr6g0486681 31.737 334 207 7 35 350 35 365 5.38e-39 149
Msa0286810 MtrunA17_Chr6g0486671 31.737 334 207 7 35 350 35 365 5.38e-39 149
Msa0286810 MtrunA17_Chr3g0128081 31.343 335 206 7 26 340 22 352 5.48e-39 149
Msa0286810 MtrunA17_Chr5g0403831 30.362 359 226 5 16 355 21 374 8.09e-39 149
Msa0286810 MtrunA17_Chr3g0119401 30.931 333 215 5 24 353 95 415 1.52e-37 145
Msa0286810 MtrunA17_Chr3g0115721 30.194 361 224 9 37 379 34 384 1.60e-36 142
Msa0286810 MtrunA17_Chr3g0115711 30.368 326 198 6 37 341 34 351 1.73e-36 142
Msa0286810 MtrunA17_Chr6g0486021 31.085 341 221 6 14 352 40 368 1.80e-36 142
Msa0286810 MtrunA17_Chr5g0407441 35.426 223 141 3 26 246 4 225 4.54e-36 143
Msa0286810 MtrunA17_Chr5g0407441 35.417 96 62 0 452 547 608 703 5.42e-11 65.5
Msa0286810 MtrunA17_Chr3g0144261 35.455 220 137 3 29 246 7 223 1.97e-35 141
Msa0286810 MtrunA17_Chr3g0144261 35.417 96 62 0 452 547 616 711 7.36e-14 74.7
Msa0286810 MtrunA17_Chr3g0115741 28.446 341 214 8 37 356 37 368 2.69e-35 139
Msa0286810 MtrunA17_Chr1g0155221 33.096 281 177 5 78 357 98 368 4.62e-35 138
Msa0286810 MtrunA17_Chr1g0155221 30.645 124 74 3 438 554 371 489 2.04e-11 66.6
Msa0286810 MtrunA17_Chr8g0376621 86.765 68 9 0 1 68 1 68 5.03e-35 126
Msa0286810 MtrunA17_Chr3g0128171 32.090 268 176 4 73 338 40 303 6.88e-35 137
Msa0286810 MtrunA17_Chr3g0115751 30.341 323 205 6 33 338 35 354 2.55e-34 136
Msa0286810 MtrunA17_Chr3g0078991 29.882 338 212 7 25 341 22 355 2.61e-34 136
Msa0286810 MtrunA17_Chr7g0273281 29.655 290 186 6 78 363 111 386 5.35e-34 135
Msa0286810 MtrunA17_Chr7g0273281 32.381 105 70 1 452 556 395 498 2.70e-11 66.2
Msa0286810 MtrunA17_Chr5g0434221 85.294 68 10 0 1 68 1 68 5.56e-34 123
Msa0286810 MtrunA17_Chr3g0115781 31.065 338 209 8 37 356 36 367 9.11e-34 134
Msa0286810 MtrunA17_Chr3g0146061 37.850 214 128 4 36 246 14 225 1.13e-33 136
Msa0286810 MtrunA17_Chr3g0146061 35.417 96 62 0 452 547 626 721 1.84e-13 73.6
Msa0286810 MtrunA17_Chr3g0078971 31.268 339 203 9 23 338 20 351 4.69e-33 132
Msa0286810 MtrunA17_Chr4g0004821 29.464 336 227 5 21 356 33 358 7.67e-33 131
Msa0286810 MtrunA17_Chr2g0286721 30.851 282 182 6 78 357 98 368 8.60e-33 131
Msa0286810 MtrunA17_Chr2g0286721 30.189 159 106 3 399 554 328 484 6.87e-12 67.8
Msa0286810 MtrunA17_Chr8g0370141 33.333 225 145 4 26 247 4 226 1.61e-32 129
Msa0286810 MtrunA17_Chr7g0259471 30.088 339 215 7 24 357 37 358 1.63e-32 130
Msa0286810 MtrunA17_Chr7g0259471 37.383 107 58 2 452 554 373 474 4.82e-13 71.6
Msa0286810 MtrunA17_Chr8g0373181 32.180 289 169 6 78 357 96 366 7.01e-32 129
Msa0286810 MtrunA17_Chr8g0373181 35.238 105 65 2 447 550 380 482 9.04e-12 67.8
Msa0286810 MtrunA17_Chr7g0259221 30.282 284 180 5 78 357 91 360 1.68e-30 124
Msa0286810 MtrunA17_Chr7g0259221 35.922 103 65 1 452 554 375 476 1.02e-12 70.5
Msa0286810 MtrunA17_Chr4g0066581 28.470 281 190 5 78 357 101 371 2.85e-30 124
Msa0286810 MtrunA17_Chr4g0066581 36.893 103 64 1 452 554 386 487 1.10e-12 70.5
Msa0286810 MtrunA17_Chr5g0419321 35.176 199 126 3 48 244 54 251 2.42e-29 123
Msa0286810 MtrunA17_Chr3g0078791 30.800 250 147 4 93 340 52 277 1.34e-26 112
Msa0286810 MtrunA17_Chr8g0373191 31.164 292 158 8 73 357 83 338 3.05e-26 112
Msa0286810 MtrunA17_Chr3g0115731 28.108 370 199 13 37 379 34 363 3.36e-23 103
Msa0286810 MtrunA17_Chr5g0404191 34.659 176 109 2 73 247 94 264 1.33e-21 95.5
Msa0286810 MtrunA17_Chr2g0290171 62.687 67 22 1 2 68 3 66 1.62e-20 85.9
Msa0286810 MtrunA17_Chr4g0065351 29.688 192 130 4 148 338 2 189 3.99e-18 86.3
Msa0286810 MtrunA17_Chr7g0273271 32.353 136 87 2 78 213 76 206 2.35e-16 78.2
Msa0286810 MtrunA17_Chr7g0273261 35.338 133 84 2 423 554 107 238 2.67e-14 73.2
Msa0286810 MtrunA17_Chr5g0404181 35.238 105 65 2 447 550 26 128 7.18e-14 68.9
Msa0286810 MtrunA17_Chr4g0065341 33.333 129 70 3 25 137 26 154 1.01e-11 63.9
Msa0286810 MtrunA17_Chr8g0370151 33.333 120 70 1 452 571 247 356 1.12e-11 66.6
Msa0286810 MtrunA17_Chr2g0319001 25.862 290 171 11 77 340 132 403 1.47e-11 67.0
Msa0286810 MtrunA17_Chr5g0446681 31.788 151 84 4 33 183 29 160 3.12e-11 64.7
Msa0286810 MtrunA17_Chr8g0356471 26.007 273 179 8 73 336 132 390 3.23e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0286810 AT1G30220.1 67.418 577 181 4 1 572 1 575 0.0 803
Msa0286810 AT4G16480.2 58.201 567 223 5 1 557 2 564 0.0 650
Msa0286810 AT4G16480.3 58.201 567 223 5 1 557 2 564 0.0 650
Msa0286810 AT4G16480.1 58.201 567 223 5 1 557 2 564 0.0 650
Msa0286810 AT2G35740.1 56.169 543 226 4 24 557 24 563 0.0 631
Msa0286810 AT2G43330.1 55.742 357 149 2 6 361 19 367 5.67e-123 372
Msa0286810 AT2G43330.1 58.333 108 45 0 449 556 375 482 1.80e-37 145
Msa0286810 AT4G36670.1 34.770 348 207 5 23 353 14 358 4.73e-55 194
Msa0286810 AT4G36670.1 38.462 104 64 0 452 555 378 481 1.28e-14 77.0
Msa0286810 AT3G18830.1 33.616 354 205 6 22 353 32 377 3.07e-52 187
Msa0286810 AT3G19940.1 34.627 335 195 6 25 340 24 353 4.61e-51 183
Msa0286810 AT1G07340.1 33.951 324 195 5 33 340 30 350 4.65e-51 183
Msa0286810 AT1G50310.1 33.234 334 202 5 25 340 24 354 6.16e-51 183
Msa0286810 AT2G20780.1 34.402 343 216 5 20 357 49 387 1.82e-50 182
Msa0286810 AT2G20780.1 35.922 103 66 0 452 554 399 501 4.49e-14 75.5
Msa0286810 AT2G18480.1 35.393 356 204 8 23 356 15 366 3.25e-50 181
Msa0286810 AT2G18480.1 40.196 102 61 0 452 553 382 483 6.43e-16 81.3
Msa0286810 AT5G16150.2 36.859 312 190 3 35 346 114 418 3.96e-49 179
Msa0286810 AT5G16150.1 36.859 312 190 3 35 346 114 418 3.96e-49 179
Msa0286810 AT5G16150.3 36.859 312 190 3 35 346 114 418 3.96e-49 179
Msa0286810 AT3G05960.1 33.333 357 208 9 5 342 5 350 1.12e-48 177
Msa0286810 AT2G16120.1 32.092 349 217 4 22 353 22 367 3.27e-47 173
Msa0286810 AT5G26250.1 33.631 336 200 8 25 342 21 351 4.64e-47 172
Msa0286810 AT5G59250.1 32.884 371 224 9 8 358 82 447 7.82e-47 173
Msa0286810 AT5G59250.1 39.815 108 65 0 448 555 451 558 2.35e-14 76.3
Msa0286810 AT2G16130.1 32.277 347 211 5 28 353 24 367 7.84e-46 169
Msa0286810 AT2G16130.1 33.333 102 68 0 452 553 388 489 8.97e-12 68.2
Msa0286810 AT1G11260.1 32.653 343 196 7 23 340 20 352 2.79e-45 168
Msa0286810 AT5G23270.1 33.432 338 197 7 25 340 23 354 1.59e-43 162
Msa0286810 AT5G26340.1 32.544 338 202 7 24 340 21 353 7.57e-43 161
Msa0286810 AT5G17010.1 32.938 337 204 8 35 353 56 388 3.69e-42 159
Msa0286810 AT5G17010.3 32.938 337 204 8 35 353 56 388 3.69e-42 159
Msa0286810 AT5G17010.4 32.938 337 204 8 35 353 56 388 3.69e-42 159
Msa0286810 AT1G05030.1 33.333 324 204 5 33 353 86 400 1.76e-41 157
Msa0286810 AT3G19930.1 31.343 335 208 5 24 340 21 351 3.27e-41 156
Msa0286810 AT3G19930.2 31.343 335 208 5 24 340 21 351 3.27e-41 156
Msa0286810 AT1G77210.2 29.972 357 222 6 2 340 9 355 3.71e-41 156
Msa0286810 AT1G77210.1 29.972 357 222 6 2 340 9 355 3.71e-41 156
Msa0286810 AT2G20780.2 32.934 334 210 7 31 357 3 329 4.49e-40 152
Msa0286810 AT2G20780.2 38.298 94 58 0 461 554 350 443 9.33e-14 74.3
Msa0286810 AT4G21480.1 32.537 335 201 6 25 340 22 350 4.74e-40 153
Msa0286810 AT3G03090.1 30.448 335 215 5 35 353 56 388 1.74e-39 151
Msa0286810 AT3G03090.1 34.615 104 68 0 448 551 397 500 3.74e-11 66.2
Msa0286810 AT3G51490.1 35.714 224 139 4 26 246 4 225 6.01e-38 149
Msa0286810 AT3G51490.1 37.500 96 60 0 452 547 611 706 6.67e-13 72.0
Msa0286810 AT3G51490.2 35.714 224 139 4 26 246 4 225 6.97e-38 149
Msa0286810 AT3G51490.2 37.500 96 60 0 452 547 619 714 6.22e-13 72.4
Msa0286810 AT4G02050.2 30.931 333 205 8 25 338 26 352 1.23e-37 146
Msa0286810 AT4G02050.1 30.931 333 205 8 25 338 26 352 1.23e-37 146
Msa0286810 AT1G05030.2 32.797 311 197 5 46 353 47 348 2.19e-37 145
Msa0286810 AT2G48020.4 30.769 338 218 7 22 357 23 346 3.71e-35 136
Msa0286810 AT2G48020.2 30.769 338 218 7 22 357 23 346 8.78e-35 137
Msa0286810 AT2G48020.2 39.806 103 61 1 452 554 361 462 1.97e-15 79.3
Msa0286810 AT2G48020.1 30.769 338 218 7 22 357 23 346 8.78e-35 137
Msa0286810 AT2G48020.1 39.806 103 61 1 452 554 361 462 1.97e-15 79.3
Msa0286810 AT1G20840.2 34.649 228 142 4 29 253 7 230 9.41e-35 140
Msa0286810 AT1G20840.2 38.462 91 56 0 457 547 623 713 8.64e-14 75.1
Msa0286810 AT1G20840.1 34.649 228 142 4 29 253 7 230 9.41e-35 140
Msa0286810 AT1G20840.1 38.462 91 56 0 457 547 623 713 8.64e-14 75.1
Msa0286810 AT1G34580.1 30.530 321 202 5 37 338 35 353 1.88e-34 137
Msa0286810 AT5G61520.1 27.368 380 249 6 7 363 5 380 2.43e-34 137
Msa0286810 AT1G67300.2 28.371 356 239 6 4 355 31 374 2.50e-34 136
Msa0286810 AT5G18840.1 32.509 283 176 6 78 357 93 363 2.97e-34 136
Msa0286810 AT5G18840.1 33.071 127 81 2 433 556 356 481 3.91e-12 69.3
Msa0286810 AT1G54730.3 31.673 281 180 6 78 357 81 350 3.14e-34 135
Msa0286810 AT1G79820.4 28.324 346 234 6 14 357 44 377 3.34e-34 135
Msa0286810 AT1G54730.2 31.673 281 180 6 78 357 81 350 5.20e-34 135
Msa0286810 AT1G54730.9 31.673 281 180 6 78 357 81 350 5.30e-34 134
Msa0286810 AT1G54730.7 31.673 281 180 6 78 357 81 350 5.30e-34 134
Msa0286810 AT1G67300.4 27.762 353 239 6 4 352 31 371 6.95e-34 134
Msa0286810 AT1G67300.5 27.762 353 239 6 4 352 31 371 6.95e-34 134
Msa0286810 AT1G67300.6 27.762 353 239 6 4 352 31 371 9.13e-34 134
Msa0286810 AT1G67300.7 27.762 353 239 6 4 352 31 371 9.13e-34 134
Msa0286810 AT1G79820.2 28.613 346 233 6 14 357 44 377 1.09e-33 134
Msa0286810 AT1G79820.1 28.613 346 233 6 14 357 44 377 1.09e-33 134
Msa0286810 AT1G67300.1 27.762 353 239 6 4 352 31 371 1.37e-33 134
Msa0286810 AT1G67300.3 27.762 353 239 6 4 352 31 371 1.37e-33 134
Msa0286810 AT4G35300.9 37.559 213 130 3 36 246 14 225 1.53e-33 136
Msa0286810 AT4G35300.9 40.625 96 57 0 452 547 615 710 1.78e-15 80.5
Msa0286810 AT4G35300.2 37.559 213 130 3 36 246 14 225 1.53e-33 136
Msa0286810 AT4G35300.2 40.625 96 57 0 452 547 615 710 1.78e-15 80.5
Msa0286810 AT4G35300.3 37.559 213 130 3 36 246 14 225 1.53e-33 136
Msa0286810 AT4G35300.3 40.625 96 57 0 452 547 615 710 1.78e-15 80.5
Msa0286810 AT4G35300.4 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa0286810 AT4G35300.4 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa0286810 AT4G35300.8 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa0286810 AT4G35300.8 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa0286810 AT4G35300.6 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa0286810 AT4G35300.6 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa0286810 AT4G35300.11 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa0286810 AT4G35300.11 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa0286810 AT4G35300.1 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa0286810 AT4G35300.1 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa0286810 AT4G35300.10 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa0286810 AT4G35300.10 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa0286810 AT4G35300.7 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa0286810 AT4G35300.7 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa0286810 AT3G05155.1 30.114 352 220 6 78 428 76 402 2.13e-33 133
Msa0286810 AT3G05155.1 33.333 99 65 1 452 550 358 455 9.84e-13 70.9
Msa0286810 AT1G75220.1 31.834 289 186 5 78 365 97 375 4.55e-33 132
Msa0286810 AT1G75220.1 31.193 109 71 2 449 554 380 487 1.43e-11 67.4
Msa0286810 AT3G05400.1 31.849 292 185 6 73 362 70 349 1.11e-32 131
Msa0286810 AT3G05155.2 32.830 265 163 5 78 341 76 326 2.77e-32 127
Msa0286810 AT1G19450.1 31.333 300 190 5 78 376 98 382 2.82e-32 130
Msa0286810 AT3G05150.2 32.384 281 179 5 78 357 84 354 3.68e-32 130
Msa0286810 AT3G05150.2 38.095 105 64 1 452 556 369 472 2.35e-15 79.3
Msa0286810 AT3G05150.1 32.384 281 179 5 78 357 84 354 3.75e-32 129
Msa0286810 AT3G05150.1 38.235 102 62 1 452 553 369 469 3.05e-15 79.0
Msa0286810 AT3G05150.3 32.384 281 179 5 78 357 84 354 3.75e-32 129
Msa0286810 AT3G05150.3 38.235 102 62 1 452 553 369 469 3.05e-15 79.0
Msa0286810 AT2G48020.3 30.341 323 209 7 22 342 23 331 4.19e-32 127
Msa0286810 AT1G54730.11 31.321 265 170 6 78 341 81 334 9.29e-32 126
Msa0286810 AT1G08930.1 30.769 286 176 8 78 357 107 376 2.64e-31 127
Msa0286810 AT1G08930.2 30.769 286 176 8 78 357 107 376 2.64e-31 127
Msa0286810 AT5G27360.4 31.118 331 207 6 31 357 40 353 2.85e-31 126
Msa0286810 AT5G27360.3 30.564 337 213 6 31 363 88 407 3.13e-31 127
Msa0286810 AT5G27360.3 33.333 99 65 1 455 553 419 516 4.23e-11 65.9
Msa0286810 AT5G27360.1 30.564 337 213 6 31 363 40 359 6.35e-31 126
Msa0286810 AT5G27360.1 33.333 99 65 1 455 553 371 468 4.33e-11 65.9
Msa0286810 AT1G34580.2 29.801 302 194 4 53 338 4 303 7.67e-31 125
Msa0286810 AT5G61520.2 28.859 298 207 4 67 363 39 332 2.18e-30 124
Msa0286810 AT1G50310.2 33.990 203 130 3 139 340 12 211 2.37e-30 122
Msa0286810 AT3G05165.3 29.021 286 193 3 78 363 79 354 2.28e-29 121
Msa0286810 AT3G05165.2 29.021 286 193 3 78 363 79 354 2.28e-29 121
Msa0286810 AT3G05165.1 29.021 286 193 3 78 363 79 354 2.28e-29 121
Msa0286810 AT5G27350.1 30.435 345 222 5 31 370 36 367 2.68e-29 121
Msa0286810 AT3G05165.4 29.021 286 193 3 78 363 79 354 3.08e-29 121
Msa0286810 AT3G05165.5 29.021 286 193 3 78 363 79 354 3.08e-29 121
Msa0286810 AT3G05165.6 29.021 286 193 3 78 363 79 354 4.57e-29 121
Msa0286810 AT3G05160.1 29.655 290 186 5 78 363 70 345 4.58e-29 120
Msa0286810 AT3G05160.1 34.343 99 64 1 455 553 357 454 6.97e-11 65.1
Msa0286810 AT3G05160.3 29.655 290 186 5 78 363 21 296 5.66e-29 119
Msa0286810 AT3G05160.3 34.343 99 64 1 455 553 308 405 9.70e-11 64.3
Msa0286810 AT3G05160.2 29.655 290 186 5 78 363 21 296 5.66e-29 119
Msa0286810 AT3G05160.2 34.343 99 64 1 455 553 308 405 9.70e-11 64.3
Msa0286810 AT1G54730.10 32.751 229 146 5 78 305 81 302 8.40e-29 117
Msa0286810 AT1G54730.6 32.751 229 146 5 78 305 81 302 8.40e-29 117
Msa0286810 AT1G54730.4 30.824 279 177 8 78 348 81 351 9.02e-29 119
Msa0286810 AT1G54730.5 30.824 279 177 8 78 348 81 351 1.44e-28 119
Msa0286810 AT1G54730.5 31.933 119 80 1 432 550 324 441 1.52e-13 73.6
Msa0286810 AT1G54730.8 30.824 279 177 8 78 348 81 351 1.51e-28 118
Msa0286810 AT3G05400.2 30.822 292 168 7 73 362 70 329 1.97e-28 118
Msa0286810 AT5G17010.2 31.618 272 160 8 35 284 53 320 7.48e-28 117
Msa0286810 AT3G51490.3 35.429 175 109 3 75 246 2 175 9.08e-28 118
Msa0286810 AT3G51490.3 37.500 96 60 0 452 547 569 664 6.09e-13 72.0
Msa0286810 AT1G08920.1 31.502 273 169 7 78 346 81 339 1.72e-27 116
Msa0286810 AT1G08920.3 31.502 273 169 7 78 346 81 339 1.90e-27 115
Msa0286810 AT1G08920.2 31.227 269 167 7 78 342 81 335 5.69e-27 114
Msa0286810 AT1G08890.1 31.317 281 181 4 78 357 76 345 7.84e-27 114
Msa0286810 AT5G27360.2 31.086 267 166 5 101 363 3 255 1.27e-26 112
Msa0286810 AT5G27360.2 32.353 102 68 1 455 556 267 367 5.20e-11 65.1
Msa0286810 AT5G27360.5 31.086 267 166 5 101 363 3 255 1.27e-26 112
Msa0286810 AT5G27360.5 32.353 102 68 1 455 556 267 367 5.20e-11 65.1
Msa0286810 AT1G08900.4 30.882 272 176 5 78 348 74 334 2.71e-26 112
Msa0286810 AT1G08900.5 29.964 277 182 5 73 348 27 292 4.77e-26 111
Msa0286810 AT1G08900.1 30.147 272 178 5 78 348 74 334 5.67e-26 111
Msa0286810 AT1G08900.1 32.353 102 68 1 454 555 360 460 9.74e-11 64.7
Msa0286810 AT1G08900.2 30.147 272 178 5 78 348 74 334 5.67e-26 111
Msa0286810 AT1G08900.2 32.353 102 68 1 454 555 360 460 9.74e-11 64.7
Msa0286810 AT3G20460.1 27.458 295 197 6 78 366 102 385 5.84e-26 112
Msa0286810 AT1G08900.3 30.147 272 178 5 78 348 66 326 6.08e-26 111
Msa0286810 AT1G08900.3 32.353 102 68 1 454 555 352 452 9.71e-11 64.7
Msa0286810 AT4G04750.1 28.369 282 190 5 78 357 85 356 1.10e-24 107
Msa0286810 AT4G04750.1 34.000 100 65 1 452 551 371 469 6.95e-11 65.1
Msa0286810 AT4G04750.2 28.369 282 190 5 78 357 85 356 1.10e-24 107
Msa0286810 AT4G04750.2 34.000 100 65 1 452 551 371 469 6.95e-11 65.1
Msa0286810 AT4G04750.3 28.369 282 190 5 78 357 129 400 1.41e-24 108
Msa0286810 AT4G04750.3 34.000 100 65 1 452 551 415 513 4.78e-11 65.9
Msa0286810 AT1G77210.3 33.005 203 132 3 139 340 7 206 1.17e-23 103
Msa0286810 AT4G04760.3 29.110 292 188 7 78 363 21 299 2.67e-23 103
Msa0286810 AT4G04760.3 32.203 118 74 3 436 553 297 408 3.80e-11 65.9
Msa0286810 AT4G04760.1 29.110 292 188 7 78 363 80 358 3.13e-23 103
Msa0286810 AT4G04760.1 32.203 118 74 3 436 553 356 467 4.72e-11 65.9
Msa0286810 AT1G79820.3 28.016 257 176 4 14 268 44 293 8.74e-22 99.0
Msa0286810 AT4G04760.2 29.057 265 169 7 78 336 80 331 8.11e-20 93.2
Msa0286810 AT4G04760.2 32.500 120 75 3 434 553 351 464 8.92e-12 68.2
Msa0286810 AT4G35300.5 40.625 96 57 0 452 547 428 523 7.68e-16 80.9
Msa0286810 AT1G79820.5 27.044 159 114 1 110 268 75 231 7.22e-11 64.7

Find 141 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAGACATTGGTTATCTTT+TGG 0.215526 2_3:-28479483 Msa0286810:three_prime_UTR
GTTTCATAGCTTAAATTAAT+TGG 0.217938 2_3:-28479618 Msa0286810:three_prime_UTR
GCAATTGCTGGAGCAATTAT+TGG 0.236188 2_3:-28481609 Msa0286810:CDS
AGTATTAAATGATTTCTAAT+TGG 0.243935 2_3:-28479325 Msa0286810:three_prime_UTR
GGAATTGTATGAAGTGTATA+AGG 0.246709 2_3:-28480284 Msa0286810:CDS
CAGCTATGAACAATCATAAT+TGG 0.292908 2_3:-28480305 Msa0286810:CDS
TTGACTTTGACTGTGGCAAT+TGG 0.311315 2_3:-28479859 Msa0286810:CDS
CTTCTGTCACTAATCACTTC+TGG 0.342039 2_3:-28480537 Msa0286810:CDS
TTTAATAGGGTCAATTATCT+TGG 0.346819 2_3:-28481514 Msa0286810:CDS
TGCGTGTATGTTTGGATTAA+CGG 0.349020 2_3:-28479567 Msa0286810:three_prime_UTR
GGTAGAGTATTTGTTGGTCT+TGG 0.352669 2_3:-28481459 Msa0286810:CDS
ATAGCTGCTGTCTTGAACTC+AGG 0.365217 2_3:+28480321 None:intergenic
CATGGAACTGTTCCCATTCC+AGG 0.373716 2_3:+28479985 None:intergenic
TTTGATTTGGTCAAATTTGT+TGG 0.375895 2_3:-28479518 Msa0286810:three_prime_UTR
TTCTCCCTCTGAGAAATAAT+TGG 0.381457 2_3:-28479680 Msa0286810:exon
ACCTCCTTCCATGCTATTGT+TGG 0.383036 2_3:+28485056 None:intergenic
GATTTGTGCAGATCAAGTTT+TGG 0.388591 2_3:-28479714 Msa0286810:CDS
ACAATGAGAGTAGCTGGATT+TGG 0.389582 2_3:+28481483 None:intergenic
CGTATGATTAGTTGGATTGC+TGG 0.392546 2_3:-28479416 Msa0286810:three_prime_UTR
CATGTCTTCCTTTCTACTGC+TGG 0.393342 2_3:+28484080 None:intergenic
AGAAAGGAAGACATGGCTTC+AGG 0.394649 2_3:-28484072 Msa0286810:intron
AAAGCAGACATATCTGCTTC+TGG 0.397219 2_3:+28485030 None:intergenic
ATCAGTTGAAATGGAGCTTA+AGG 0.397966 2_3:-28480733 Msa0286810:CDS
TTGATTTGGTCAAATTTGTT+GGG 0.403219 2_3:-28479517 Msa0286810:three_prime_UTR
ATTGTTGGTAGAGTATTTGT+TGG 0.405460 2_3:-28481465 Msa0286810:CDS
GAGAATGTTTATCTCTATCA+TGG 0.407356 2_3:-28485005 Msa0286810:CDS
GTTGCGGTGTCACTTTGATT+TGG 0.410522 2_3:-28479531 Msa0286810:three_prime_UTR
ATATATTTCATTGACAAAAC+CGG 0.410815 2_3:-28480486 Msa0286810:CDS
AAATGGGTCGTATGATTAGT+TGG 0.412737 2_3:-28479424 Msa0286810:three_prime_UTR
ATACTTGCTGTGTTGTGTTT+CGG 0.413397 2_3:+28485189 None:intergenic
GTATTTGTTGGTCTTGGTGT+AGG 0.414771 2_3:-28481453 Msa0286810:CDS
GGCACATGGAGGTGGATGTT+AGG 0.417581 2_3:-28481173 Msa0286810:CDS
GCTTCGCCAACTAGAGTTAG+AGG 0.419914 2_3:-28481393 Msa0286810:CDS
ATTGAAAGAATCAGTTGAAA+TGG 0.425753 2_3:-28480742 Msa0286810:CDS
CATATTCTTCTCACCTGGAA+TGG 0.431782 2_3:-28479998 Msa0286810:CDS
GCAATTATTGGAGCAGCAAT+TGG 0.438593 2_3:-28481597 Msa0286810:CDS
GTATGTGCAGGAGTTATATC+TGG 0.439009 2_3:-28484131 Msa0286810:intron
CCTTCCATTGTTCAGTTGGC+CGG 0.440677 2_3:-28480585 Msa0286810:CDS
AGCAATTGCTGTACTCACTA+TGG 0.443192 2_3:+28481623 None:intergenic
ACTTCTGGCCTCAATGCAAT+AGG 0.445200 2_3:-28480522 Msa0286810:CDS
CATCAACTTGGCCTTTACTA+AGG 0.446650 2_3:-28481313 Msa0286810:intron
AAAGGTTGTCCTAGCAACTT+TGG 0.448496 2_3:-28480054 Msa0286810:CDS
ATTGGAACCCCTTTAGTCTC+TGG 0.450446 2_3:+28479766 None:intergenic
GTTAGAAGAGGTTTATATGC+AGG 0.450905 2_3:-28480666 Msa0286810:CDS
AAAGGCCAAGTTGATGAGAT+AGG 0.452110 2_3:+28481320 None:intergenic
CCTTTCCTATCTCATCAACT+TGG 0.453480 2_3:-28481325 Msa0286810:CDS
TGTTGATACCGACAAATTGT+TGG 0.456542 2_3:+28480625 None:intergenic
TGAAATTTGCAGACCAAGCC+AGG 0.459373 2_3:-28480144 Msa0286810:intron
AACATCCACCTCCATGTGCC+TGG 0.460125 2_3:+28481176 None:intergenic
ATCTATCCATTGAGGTATAG+AGG 0.460517 2_3:-28479946 Msa0286810:CDS
TATTTGTTGGTCTTGGTGTA+GGG 0.463553 2_3:-28481452 Msa0286810:CDS
ATGTCTTCCTTTCTACTGCT+GGG 0.469742 2_3:+28484081 None:intergenic
CTGTGGCAATTGGACCTGCT+TGG 0.472061 2_3:-28479849 Msa0286810:CDS
CAATGCAAGTTTCTTCCTCC+CGG 0.473299 2_3:+28480467 None:intergenic
TGGTGTAGGGATGGCTTCAA+TGG 0.473336 2_3:-28481439 Msa0286810:CDS
AATCCAGCTACTCTCATTGT+TGG 0.476349 2_3:-28481480 Msa0286810:CDS
ATATTCTTCTCACCTGGAAT+GGG 0.477734 2_3:-28479997 Msa0286810:CDS
AAAGCAAGACGAAGAACATA+AGG 0.481359 2_3:+28484976 None:intergenic
CTACCAACAATGAGAGTAGC+TGG 0.485518 2_3:+28481477 None:intergenic
AGGGGTTCCAATGGAGGAAG+TGG 0.488028 2_3:-28479755 Msa0286810:CDS
GATTAAACATGCACCTGGCT+TGG 0.488753 2_3:+28480131 None:intergenic
AGGCACCAGGCACATGGAGG+TGG 0.488950 2_3:-28481181 Msa0286810:CDS
GGATGGATCAATGATAGATT+CGG 0.492067 2_3:-28481573 Msa0286810:CDS
CATATTCCTCTATACCTCAA+TGG 0.493473 2_3:+28479940 None:intergenic
AGAGGTTTATATGCAGGTTG+TGG 0.493521 2_3:-28480660 Msa0286810:CDS
ATAGTGAGTACAGCAATTGC+TGG 0.496005 2_3:-28481621 Msa0286810:CDS
CGGTGAATTTGTCCGAGTTG+CGG 0.500173 2_3:-28479547 Msa0286810:three_prime_UTR
AACTCTAGTTGGCGAAGCCT+CGG 0.502911 2_3:+28481398 None:intergenic
TTGTGCTGCTCCTGGTGACA+TGG 0.507167 2_3:-28480238 Msa0286810:intron
ATGAATTCCCAGCAGTAGAA+AGG 0.509817 2_3:-28484088 Msa0286810:CDS
AGTTTCACACACCTTAGTAA+AGG 0.510939 2_3:+28481302 None:intergenic
CATAGAGCATGGTACACAAA+AGG 0.511414 2_3:-28480072 Msa0286810:CDS
TGTTGGTCTTGGTGTAGGGA+TGG 0.512125 2_3:-28481448 Msa0286810:CDS
CTGACCAATTATTTCTCAGA+GGG 0.515286 2_3:+28479676 None:intergenic
CTTGCATTGATTAGTTTGAC+CGG 0.517094 2_3:-28480453 Msa0286810:CDS
TCGCTCAGGCACCAGGCACA+TGG 0.524907 2_3:-28481187 Msa0286810:intron
CTGGAATGGGAACAGTTCCA+TGG 0.524999 2_3:-28479984 Msa0286810:CDS
CAGTCCTTCCATTGTTCAGT+TGG 0.529091 2_3:-28480589 Msa0286810:CDS
ATCCTTCTTGACTTTGACTG+TGG 0.529313 2_3:-28479866 Msa0286810:CDS
AGAGCACCTCTAACTCTAGT+TGG 0.534348 2_3:+28481387 None:intergenic
CACTTCCCGAGTCACCTCGT+TGG 0.534418 2_3:-28481106 Msa0286810:CDS
ATACTCTCCACTTCCTCCAT+TGG 0.537148 2_3:+28479748 None:intergenic
GTACAACCAACGAGGTGACT+CGG 0.541162 2_3:+28481100 None:intergenic
AAAACAACATCTGTTAGAAG+AGG 0.541737 2_3:-28480678 Msa0286810:CDS
GTTGTCCTAGCAACTTTGGT+TGG 0.543320 2_3:-28480050 Msa0286810:CDS
ATTTCAGAGTTAACAACCCA+TGG 0.544878 2_3:+28479967 None:intergenic
TTCGCTTTCACGAAAAGTAA+CGG 0.545737 2_3:+28480404 None:intergenic
TGATTTCTCGCTCAGGCACC+AGG 0.546000 2_3:-28481194 Msa0286810:intron
ATTATTGGAGCAGCAATTGG+TGG 0.548778 2_3:-28481594 Msa0286810:CDS
ATTCTAAATATGCAAGACAT+TGG 0.551719 2_3:-28479494 Msa0286810:three_prime_UTR
TTGGAGCAGCAATTGGTGGA+TGG 0.555014 2_3:-28481590 Msa0286810:CDS
AGCACAATTTGTATCACAGC+AGG 0.556466 2_3:+28481137 None:intergenic
TACAACCAACGAGGTGACTC+GGG 0.561888 2_3:+28481101 None:intergenic
ACCTCGTTGGTTGTACCGCA+AGG 0.564238 2_3:-28481093 Msa0286810:intron
AGAGACTAAAGGGGTTCCAA+TGG 0.566345 2_3:-28479764 Msa0286810:CDS
GAATTGTATGAAGTGTATAA+GGG 0.566500 2_3:-28480283 Msa0286810:CDS
TAGCTGCTGTCTTGAACTCA+GGG 0.566600 2_3:+28480322 None:intergenic
TGCCACAGTCAAAGTCAAGA+AGG 0.567232 2_3:+28479864 None:intergenic
CACACCAACAATAGCATGGA+AGG 0.568763 2_3:-28485060 Msa0286810:exon
TTCGAGATTAAACATGCACC+TGG 0.569618 2_3:+28480126 None:intergenic
TACATCATATTCTTCTCACC+TGG 0.570930 2_3:-28480003 Msa0286810:CDS
AGGGCTGAGTCCACTACTTG+TGG 0.575120 2_3:-28480264 Msa0286810:CDS
TATATTTCATTGACAAAACC+GGG 0.581152 2_3:-28480485 Msa0286810:CDS
CTGTAGAGGATTGTGAAATG+AGG 0.586256 2_3:-28479378 Msa0286810:three_prime_UTR
GACTAAAGGGGTTCCAATGG+AGG 0.587381 2_3:-28479761 Msa0286810:CDS
GCGATCCAACCAAAGTTGCT+AGG 0.590293 2_3:+28480045 None:intergenic
TGGAATGGGAACAGTTCCAT+GGG 0.592733 2_3:-28479983 Msa0286810:CDS
AGAATATGATGTAGAGTGCG+AGG 0.597439 2_3:+28480013 None:intergenic
CCGGCCAACTGAACAATGGA+AGG 0.599512 2_3:+28480585 None:intergenic
AAATTGAACCTATTGCATTG+AGG 0.600439 2_3:+28480514 None:intergenic
CTTTCGATGACACTAACCAT+TGG 0.601711 2_3:+28480372 None:intergenic
ATCAAAGTGACACCGCAACT+CGG 0.602637 2_3:+28479535 None:intergenic
AGAACACACCAACAATAGCA+TGG 0.604784 2_3:-28485064 Msa0286810:exon
CAGCAGTAGAAAGGAAGACA+TGG 0.606845 2_3:-28484079 Msa0286810:CDS
AACAATGTAACAGGGCAAAG+AGG 0.608199 2_3:-28480829 Msa0286810:intron
AATAGCATCAACAACGGTGT+GGG 0.610367 2_3:-28479911 Msa0286810:CDS
ACTCTGAAATCTATCCATTG+AGG 0.612345 2_3:-28479954 Msa0286810:CDS
AAGCGAAATTCATGCACCAA+TGG 0.615781 2_3:-28480388 Msa0286810:CDS
AAGAGATTTACCATGTCACC+AGG 0.619446 2_3:+28480228 None:intergenic
AGCACAAAATCCACAAGTAG+TGG 0.619823 2_3:+28480254 None:intergenic
AATCCTCATGAAATCTGTAG+AGG 0.620619 2_3:-28479392 Msa0286810:three_prime_UTR
AATATCATGAAAGTCCAAGC+AGG 0.622278 2_3:+28479835 None:intergenic
ATCTCCTTTGTATATCTCCG+AGG 0.630924 2_3:-28481415 Msa0286810:CDS
CCAAGTTGATGAGATAGGAA+AGG 0.636278 2_3:+28481325 None:intergenic
TCTGACCAATTATTTCTCAG+AGG 0.636844 2_3:+28479675 None:intergenic
GAATATGATGTAGAGTGCGA+GGG 0.637075 2_3:+28480014 None:intergenic
AGAAGGATTGTGAAACAACA+AGG 0.638416 2_3:+28479881 None:intergenic
AATCCTCTACAGATTTCATG+AGG 0.647807 2_3:+28479389 None:intergenic
GCGGCGTTGATCATAGAGCA+TGG 0.648819 2_3:-28480083 Msa0286810:CDS
GAATAGCATCAACAACGGTG+TGG 0.653838 2_3:-28479912 Msa0286810:CDS
CGGTTAAAAGAGTCAAAGAG+AGG 0.654748 2_3:+28480424 None:intergenic
GAAGCCTCGGAGATATACAA+AGG 0.655795 2_3:+28481411 None:intergenic
AGGTATAGAGGAATATGCGG+AGG 0.666557 2_3:-28479934 Msa0286810:CDS
CTCAGGCACCAGGCACATGG+AGG 0.675695 2_3:-28481184 Msa0286810:intron
AAAACCGGCCAACTGAACAA+TGG 0.684628 2_3:+28480581 None:intergenic
TTGAGGTATAGAGGAATATG+CGG 0.686287 2_3:-28479937 Msa0286810:CDS
ACCAACAATAGCATGGAAGG+AGG 0.695364 2_3:-28485057 Msa0286810:exon
AGTCAAAGAGAGGACAACAC+CGG 0.714867 2_3:+28480434 None:intergenic
CGGAGGAATAGCATCAACAA+CGG 0.719019 2_3:-28479917 Msa0286810:CDS
ATTTCATTGACAAAACCGGG+AGG 0.748225 2_3:-28480482 Msa0286810:CDS
ACCTTGCGGTACAACCAACG+AGG 0.754260 2_3:+28481092 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTATATATTTTTAA+AGG - chr2_3:28480142-28480161 Msa0286810:intron 0.0%
!! ATAATATAAAAAAATTGGAT+TGG - chr2_3:28480649-28480668 Msa0286810:CDS 10.0%
!! TAAGATCAAATTTAATATAT+CGG - chr2_3:28480874-28480893 Msa0286810:intron 10.0%
!! ACATAAAATATGAAAATTAA+TGG + chr2_3:28481362-28481381 None:intergenic 10.0%
!!! TATGTGATTTTATATTTATT+AGG - chr2_3:28481813-28481832 Msa0286810:intron 10.0%
!!! ATGTGATTTTATATTTATTA+GGG - chr2_3:28481814-28481833 Msa0286810:intron 10.0%
!! AAAAATAAAAATTGTGAATT+TGG - chr2_3:28482030-28482049 Msa0286810:intron 10.0%
!!! ATTTTATTTTTTTAACATTC+CGG + chr2_3:28482789-28482808 None:intergenic 10.0%
!!! TACTGATTTTATGAAATATT+AGG + chr2_3:28479989-28480008 None:intergenic 15.0%
!! ATAATTAGATTAGATTTACA+TGG + chr2_3:28481110-28481129 None:intergenic 15.0%
!! TGTTAAAAAAAGACATTATT+AGG + chr2_3:28481482-28481501 None:intergenic 15.0%
!! TAAAATCACATAATTTGAAA+CGG + chr2_3:28481805-28481824 None:intergenic 15.0%
!!! TGTGATTTTATATTTATTAG+GGG - chr2_3:28481815-28481834 Msa0286810:intron 15.0%
!! TAAAAAAAGAGTAAACTATT+TGG + chr2_3:28482005-28482024 None:intergenic 15.0%
!!! GATTTAGTAAATTACTTTTT+TGG + chr2_3:28482127-28482146 None:intergenic 15.0%
!!! TTTTATTTTTTTAACATTCC+GGG + chr2_3:28482788-28482807 None:intergenic 15.0%
!! TGATAAAAAAAAAATGTAAC+AGG - chr2_3:28482860-28482879 Msa0286810:intron 15.0%
!!! TTTTTTTCGTTTTTATATGT+CGG - chr2_3:28483254-28483273 Msa0286810:intron 15.0%
!! AGTATTAAATGATTTCTAAT+TGG - chr2_3:28485184-28485203 Msa0286810:five_prime_UTR 15.0%
!! AAAAATTTATGAAGAAACAG+AGG + chr2_3:28479622-28479641 None:intergenic 20.0%
!!! ATTATGTAAAGGTTGATAAA+TGG - chr2_3:28480352-28480371 Msa0286810:CDS 20.0%
!!! ATTTCAACCTTTTACTTTAA+TGG - chr2_3:28480526-28480545 Msa0286810:CDS 20.0%
!! TAAAAAAAGACATTATTAGG+AGG + chr2_3:28481479-28481498 None:intergenic 20.0%
!!! TTTTTTAACAAATGTTCGAT+TGG - chr2_3:28481492-28481511 Msa0286810:CDS 20.0%
!! TTCAGTGTAATTATATATGT+CGG + chr2_3:28481662-28481681 None:intergenic 20.0%
!!! GTGATTTTATATTTATTAGG+GGG - chr2_3:28481816-28481835 Msa0286810:intron 20.0%
!! AGTTTGGAAAAATTAATGAT+GGG + chr2_3:28481843-28481862 None:intergenic 20.0%
!! TTGACTAATTTATAAGAGTT+TGG + chr2_3:28481859-28481878 None:intergenic 20.0%
!! TTTGATGAGATAAATTACTT+GGG + chr2_3:28482077-28482096 None:intergenic 20.0%
!!! TTTTGATGAGATAAATTACT+TGG + chr2_3:28482078-28482097 None:intergenic 20.0%
!!! AATTTATTCCTTTTCATTTG+TGG + chr2_3:28482152-28482171 None:intergenic 20.0%
!!! GAATAAATTTTTCCTGAAAA+AGG - chr2_3:28482163-28482182 Msa0286810:intron 20.0%
!!! CTTTTTAACAATTATGGAAA+CGG + chr2_3:28482522-28482541 None:intergenic 20.0%
!! AAAATATAATGCTTCTTTGT+TGG - chr2_3:28482689-28482708 Msa0286810:intron 20.0%
!! CATATAAAAACGAAAAAAAG+AGG + chr2_3:28483253-28483272 None:intergenic 20.0%
!! ATTGGATGTAAAATAAAAGT+TGG - chr2_3:28483509-28483528 Msa0286810:intron 20.0%
!! ATATATTTCATTGACAAAAC+CGG - chr2_3:28484023-28484042 Msa0286810:intron 20.0%
!! AAAAATACAGAAGATATTTG+CGG - chr2_3:28484407-28484426 Msa0286810:intron 20.0%
!! AAAAATGATGACAAAGAAAA+TGG + chr2_3:28484720-28484739 None:intergenic 20.0%
!! GTTTCATAGCTTAAATTAAT+TGG - chr2_3:28484891-28484910 Msa0286810:intron 20.0%
!!! AGTTAGCATTTTAATTCAAA+TGG - chr2_3:28485068-28485087 Msa0286810:five_prime_UTR 20.0%
!!! GTTAGCATTTTAATTCAAAT+GGG - chr2_3:28485069-28485088 Msa0286810:five_prime_UTR 20.0%
! TCATGCATTTAAACAATCAA+CGG - chr2_3:28479939-28479958 Msa0286810:CDS 25.0%
!!! TGATTTTAATGTTGAGTCAA+AGG - chr2_3:28480034-28480053 Msa0286810:CDS 25.0%
! AAGAAAAGCTATTATTTGAC+TGG - chr2_3:28480215-28480234 Msa0286810:intron 25.0%
!! GAAAAGGGATTTATTTGTTA+AGG + chr2_3:28480500-28480519 None:intergenic 25.0%
! TTCAAGTCCATTAAAGTAAA+AGG + chr2_3:28480536-28480555 None:intergenic 25.0%
!!! TGTTTTTTTGTGAATCAAGT+TGG + chr2_3:28480589-28480608 None:intergenic 25.0%
! TTAGATTAGATTTACATGGT+TGG + chr2_3:28481106-28481125 None:intergenic 25.0%
!! ATGATACGTATGTATTCTTT+TGG - chr2_3:28481174-28481193 Msa0286810:CDS 25.0%
! TATGAAAATTAATGGTTGAG+AGG + chr2_3:28481354-28481373 None:intergenic 25.0%
!!! TCAATGGTATTTTAGTTATG+TGG + chr2_3:28481435-28481454 None:intergenic 25.0%
! GAGTTTGGAAAAATTAATGA+TGG + chr2_3:28481844-28481863 None:intergenic 25.0%
!! AACCATGAGTTTTCAAATAA+AGG - chr2_3:28481877-28481896 Msa0286810:intron 25.0%
!! ATCCTTTATTTGAAAACTCA+TGG + chr2_3:28481882-28481901 None:intergenic 25.0%
!!! GTTATTTCTAACCTAAAATG+AGG + chr2_3:28481931-28481950 None:intergenic 25.0%
! CGTTTCCATAATTGTTAAAA+AGG - chr2_3:28482520-28482539 Msa0286810:intron 25.0%
!! TGCATCCTTTTTAACAATTA+TGG + chr2_3:28482528-28482547 None:intergenic 25.0%
!!! TGTTTTCATTCTTTGAGAAA+AGG + chr2_3:28482654-28482673 None:intergenic 25.0%
! AATTGACCCTATTAAAAAGA+GGG + chr2_3:28482991-28483010 None:intergenic 25.0%
! TAATTGACCCTATTAAAAAG+AGG + chr2_3:28482992-28483011 None:intergenic 25.0%
! TTTAATAGGGTCAATTATCT+TGG - chr2_3:28482995-28483014 Msa0286810:intron 25.0%
! ATCTTCTTTAACAATGTAAC+AGG - chr2_3:28483671-28483690 Msa0286810:intron 25.0%
! TCTTCTTTAACAATGTAACA+GGG - chr2_3:28483672-28483691 Msa0286810:intron 25.0%
!! AATTCTGAAAAAGATATACG+AGG - chr2_3:28483716-28483735 Msa0286810:intron 25.0%
! ATTGAAAGAATCAGTTGAAA+TGG - chr2_3:28483767-28483786 Msa0286810:intron 25.0%
! TATATTTCATTGACAAAACC+GGG - chr2_3:28484024-28484043 Msa0286810:intron 25.0%
! GAATTGTATGAAGTGTATAA+GGG - chr2_3:28484226-28484245 Msa0286810:intron 25.0%
!!! TTTGATTTGGTCAAATTTGT+TGG - chr2_3:28484991-28485010 Msa0286810:CDS 25.0%
!!! TTGATTTGGTCAAATTTGTT+GGG - chr2_3:28484992-28485011 Msa0286810:CDS 25.0%
! ATTCTAAATATGCAAGACAT+TGG - chr2_3:28485015-28485034 Msa0286810:CDS 25.0%
GAGAATGTTTATCTCTATCA+TGG - chr2_3:28479504-28479523 Msa0286810:three_prime_UTR 30.0%
ATTTATGAAGAAACAGAGGA+GGG + chr2_3:28479618-28479637 None:intergenic 30.0%
AATTTATGAAGAAACAGAGG+AGG + chr2_3:28479619-28479638 None:intergenic 30.0%
ATTCTCTTTAACTCCAATTG+TGG - chr2_3:28479754-28479773 Msa0286810:CDS 30.0%
CTAGTAATGACAATTAGTGT+TGG - chr2_3:28479803-28479822 Msa0286810:CDS 30.0%
AATGCATGAAATTGCGATAA+CGG + chr2_3:28479928-28479947 None:intergenic 30.0%
CATGCATTTAAACAATCAAC+GGG - chr2_3:28479940-28479959 Msa0286810:CDS 30.0%
GGTTGAAATTCACAAGAAAA+GGG + chr2_3:28480515-28480534 None:intergenic 30.0%
AGGTTGAAATTCACAAGAAA+AGG + chr2_3:28480516-28480535 None:intergenic 30.0%
!!! TTTTTTGTGAATCAAGTTGG+TGG + chr2_3:28480586-28480605 None:intergenic 30.0%
TTTCTATGTATCACAACACT+TGG - chr2_3:28480620-28480639 Msa0286810:CDS 30.0%
TTGATCTTATCCGTTAAATC+CGG + chr2_3:28480863-28480882 None:intergenic 30.0%
AGGTAAATTTGCCAATAGAA+GGG + chr2_3:28481053-28481072 None:intergenic 30.0%
TAGGTAAATTTGCCAATAGA+AGG + chr2_3:28481054-28481073 None:intergenic 30.0%
AAACTCTAAATTCATCGAGT+AGG + chr2_3:28481073-28481092 None:intergenic 30.0%
TGACATGTATATGTGAATAG+AGG - chr2_3:28481232-28481251 Msa0286810:intron 30.0%
ATATGTGAATAGAGGAATAG+AGG - chr2_3:28481240-28481259 Msa0286810:intron 30.0%
TACCATTGAAATTCTCTAAG+AGG - chr2_3:28481446-28481465 Msa0286810:CDS 30.0%
TCATAGATCAATGGAAATTG+TGG + chr2_3:28481587-28481606 None:intergenic 30.0%
GTGCTTAATTCATAGATCAA+TGG + chr2_3:28481596-28481615 None:intergenic 30.0%
!! GCACATACACTTTTTGAATT+AGG - chr2_3:28481612-28481631 Msa0286810:CDS 30.0%
GTAATTATATATGTCGGTGT+CGG + chr2_3:28481656-28481675 None:intergenic 30.0%
! ATCACATAATTTGAAACGGA+TGG + chr2_3:28481801-28481820 None:intergenic 30.0%
AAAATGAGGTGGTTTCTTAT+AGG + chr2_3:28481917-28481936 None:intergenic 30.0%
! ATAAGAAACCACCTCATTTT+AGG - chr2_3:28481917-28481936 Msa0286810:intron 30.0%
ATTTCTAACCTAAAATGAGG+TGG + chr2_3:28481928-28481947 None:intergenic 30.0%
TAAATCTGCCACAAATGAAA+AGG - chr2_3:28482141-28482160 Msa0286810:intron 30.0%
!! TTGTATTGATTCTGTGGATT+TGG - chr2_3:28482271-28482290 Msa0286810:intron 30.0%
ACCAAATTGAATAGTTGAAC+CGG - chr2_3:28482394-28482413 Msa0286810:intron 30.0%
TAACTGAATTAGAGACTCTT+CGG + chr2_3:28482432-28482451 None:intergenic 30.0%
AATGTTTGAATGTTCAAGTC+CGG - chr2_3:28482458-28482477 Msa0286810:intron 30.0%
TCTAAGAAACATGTGAGTTA+TGG + chr2_3:28482491-28482510 None:intergenic 30.0%
AGGATGCAATCAAATCTATA+AGG - chr2_3:28482540-28482559 Msa0286810:intron 30.0%
! CAGATACCCTCTTTTTAATA+GGG - chr2_3:28482982-28483001 Msa0286810:intron 30.0%
! ATTGTTGGTAGAGTATTTGT+TGG - chr2_3:28483044-28483063 Msa0286810:intron 30.0%
GACTGTAATATGTCTGATTA+AGG + chr2_3:28483454-28483473 None:intergenic 30.0%
ACATATTACAGTCGCATAAT+CGG - chr2_3:28483461-28483480 Msa0286810:intron 30.0%
ATTAAGTAAAGTCAGAACGT+GGG + chr2_3:28483491-28483510 None:intergenic 30.0%
AATTAAGTAAAGTCAGAACG+TGG + chr2_3:28483492-28483511 None:intergenic 30.0%
ACGTTCTGACTTTACTTAAT+TGG - chr2_3:28483491-28483510 Msa0286810:intron 30.0%
!! AAAAAAGTTGCGTTGATTGA+TGG + chr2_3:28483588-28483607 None:intergenic 30.0%
AAAACAACATCTGTTAGAAG+AGG - chr2_3:28483831-28483850 Msa0286810:intron 30.0%
! GCATTTTTCCAACAATTTGT+CGG - chr2_3:28483876-28483895 Msa0286810:intron 30.0%
AAATTGAACCTATTGCATTG+AGG + chr2_3:28483998-28484017 None:intergenic 30.0%
CAGCTATGAACAATCATAAT+TGG - chr2_3:28484204-28484223 Msa0286810:intron 30.0%
GGAATTGTATGAAGTGTATA+AGG - chr2_3:28484225-28484244 Msa0286810:intron 30.0%
!! CAAGACATTGGTTATCTTTT+GGG - chr2_3:28485027-28485046 Msa0286810:CDS 30.0%
AAAGCAAGACGAAGAACATA+AGG + chr2_3:28479536-28479555 None:intergenic 35.0%
CAGTATCATAGCCAAAAAGA+AGG + chr2_3:28479577-28479596 None:intergenic 35.0%
!!! CTTCTTTTTGGCTATGATAC+TGG - chr2_3:28479575-28479594 Msa0286810:three_prime_UTR 35.0%
AATTGATATCGAGCCACAAT+TGG + chr2_3:28479770-28479789 None:intergenic 35.0%
GTGTATGTTTAGTATGACGA+TGG + chr2_3:28479883-28479902 None:intergenic 35.0%
GTCCTCTTAGAGAATTTCAA+TGG + chr2_3:28481451-28481470 None:intergenic 35.0%
! AAATGTTCGATTGGTCCAAT+TGG - chr2_3:28481501-28481520 Msa0286810:CDS 35.0%
! AATGTTCGATTGGTCCAATT+GGG - chr2_3:28481502-28481521 Msa0286810:CDS 35.0%
! TTCAACTTTCCATTGGTTGT+TGG + chr2_3:28481562-28481581 None:intergenic 35.0%
! TGTGGTTTTCAACTTTCCAT+TGG + chr2_3:28481569-28481588 None:intergenic 35.0%
GAGTAACATCGATATACAGA+TGG + chr2_3:28481779-28481798 None:intergenic 35.0%
!! CAAGTGGTGTTGTAAATTCT+TGG - chr2_3:28481970-28481989 Msa0286810:intron 35.0%
! ATTACGTTACTGCCTTTTTC+AGG + chr2_3:28482178-28482197 None:intergenic 35.0%
! AGGCAGTAACGTAATGATTT+TGG - chr2_3:28482183-28482202 Msa0286810:intron 35.0%
CCACAGAATCAATACAAAGA+TGG + chr2_3:28482268-28482287 None:intergenic 35.0%
!! CCATCTTTGTATTGATTCTG+TGG - chr2_3:28482265-28482284 Msa0286810:intron 35.0%
ATGTTTGAATGTTCAAGTCC+GGG - chr2_3:28482459-28482478 Msa0286810:intron 35.0%
AATGTGTACATCTCTTCCAA+CGG + chr2_3:28482750-28482769 None:intergenic 35.0%
GGATGGATCAATGATAGATT+CGG - chr2_3:28482936-28482955 Msa0286810:intron 35.0%
! GCAGATACCCTCTTTTTAAT+AGG - chr2_3:28482981-28483000 Msa0286810:intron 35.0%
!! TATTTGTTGGTCTTGGTGTA+GGG - chr2_3:28483057-28483076 Msa0286810:intron 35.0%
AGTTTCACACACCTTAGTAA+AGG + chr2_3:28483210-28483229 None:intergenic 35.0%
ATCAGTTGAAATGGAGCTTA+AGG - chr2_3:28483776-28483795 Msa0286810:intron 35.0%
GTTAGAAGAGGTTTATATGC+AGG - chr2_3:28483843-28483862 Msa0286810:intron 35.0%
TGTTGATACCGACAAATTGT+TGG + chr2_3:28483887-28483906 None:intergenic 35.0%
! TGTTCTTTTCGATGCAAAAC+CGG + chr2_3:28483946-28483965 None:intergenic 35.0%
!! CTTGCATTGATTAGTTTGAC+CGG - chr2_3:28484056-28484075 Msa0286810:intron 35.0%
TTCGCTTTCACGAAAAGTAA+CGG + chr2_3:28484108-28484127 None:intergenic 35.0%
TACATCATATTCTTCTCACC+TGG - chr2_3:28484506-28484525 Msa0286810:intron 35.0%
ATATTCTTCTCACCTGGAAT+GGG - chr2_3:28484512-28484531 Msa0286810:intron 35.0%
ATTTCAGAGTTAACAACCCA+TGG + chr2_3:28484545-28484564 None:intergenic 35.0%
!! ACTCTGAAATCTATCCATTG+AGG - chr2_3:28484555-28484574 Msa0286810:intron 35.0%
ATCTATCCATTGAGGTATAG+AGG - chr2_3:28484563-28484582 Msa0286810:intron 35.0%
CATATTCCTCTATACCTCAA+TGG + chr2_3:28484572-28484591 None:intergenic 35.0%
TTGAGGTATAGAGGAATATG+CGG - chr2_3:28484572-28484591 Msa0286810:intron 35.0%
AGAAGGATTGTGAAACAACA+AGG + chr2_3:28484631-28484650 None:intergenic 35.0%
AATATCATGAAAGTCCAAGC+AGG + chr2_3:28484677-28484696 None:intergenic 35.0%
! ATTTTTGTGCCAGAGACTAA+AGG - chr2_3:28484734-28484753 Msa0286810:intron 35.0%
! TTTTTGTGCCAGAGACTAAA+GGG - chr2_3:28484735-28484754 Msa0286810:intron 35.0%
! GATTTGTGCAGATCAAGTTT+TGG - chr2_3:28484795-28484814 Msa0286810:intron 35.0%
! TTCTCCCTCTGAGAAATAAT+TGG - chr2_3:28484829-28484848 Msa0286810:intron 35.0%
! CTGACCAATTATTTCTCAGA+GGG + chr2_3:28484836-28484855 None:intergenic 35.0%
! TCTGACCAATTATTTCTCAG+AGG + chr2_3:28484837-28484856 None:intergenic 35.0%
!!! GTTAGTTTTGCGTGTATGTT+TGG - chr2_3:28484934-28484953 Msa0286810:intron 35.0%
TGCGTGTATGTTTGGATTAA+CGG - chr2_3:28484942-28484961 Msa0286810:CDS 35.0%
!! GCAAGACATTGGTTATCTTT+TGG - chr2_3:28485026-28485045 Msa0286810:CDS 35.0%
AAATGGGTCGTATGATTAGT+TGG - chr2_3:28485085-28485104 Msa0286810:five_prime_UTR 35.0%
AATCCTCATGAAATCTGTAG+AGG - chr2_3:28485117-28485136 Msa0286810:five_prime_UTR 35.0%
AATCCTCTACAGATTTCATG+AGG + chr2_3:28485123-28485142 None:intergenic 35.0%
AGAACACACCAACAATAGCA+TGG - chr2_3:28479445-28479464 Msa0286810:three_prime_UTR 40.0%
AAAGCAGACATATCTGCTTC+TGG + chr2_3:28479482-28479501 None:intergenic 40.0%
!!! CTTGCTTTTTCTGCTGGAAT+TGG - chr2_3:28479548-28479567 Msa0286810:three_prime_UTR 40.0%
CGTCAGAATTACGATGATTC+TGG - chr2_3:28479852-28479871 Msa0286810:CDS 40.0%
AATCACAGTTGCATGCATTG+TGG + chr2_3:28480019-28480038 None:intergenic 40.0%
GATAAATGGTGAGTATGTGC+AGG - chr2_3:28480366-28480385 Msa0286810:CDS 40.0%
GTATGTGCAGGAGTTATATC+TGG - chr2_3:28480378-28480397 Msa0286810:CDS 40.0%
ATGAATTCCCAGCAGTAGAA+AGG - chr2_3:28480421-28480440 Msa0286810:CDS 40.0%
ATGTCTTCCTTTCTACTGCT+GGG + chr2_3:28480431-28480450 None:intergenic 40.0%
GTGAAGCAGAGAACATGTAA+GGG + chr2_3:28480561-28480580 None:intergenic 40.0%
TGTGAAGCAGAGAACATGTA+AGG + chr2_3:28480562-28480581 None:intergenic 40.0%
! GTTTTCTATGTAACCCGATC+CGG - chr2_3:28480841-28480860 Msa0286810:intron 40.0%
TTATCCGTTAAATCCGGATC+GGG + chr2_3:28480857-28480876 None:intergenic 40.0%
CTTATCCGTTAAATCCGGAT+CGG + chr2_3:28480858-28480877 None:intergenic 40.0%
GCAAGTTGTATCCCTTCTAT+TGG - chr2_3:28481039-28481058 Msa0286810:intron 40.0%
! ATGTTCGATTGGTCCAATTG+GGG - chr2_3:28481503-28481522 Msa0286810:CDS 40.0%
! CAGGCTTTAACTGCTTTGTT+GGG + chr2_3:28481535-28481554 None:intergenic 40.0%
! TCAGGCTTTAACTGCTTTGT+TGG + chr2_3:28481536-28481555 None:intergenic 40.0%
CATCGATATACAGATGGAGA+TGG + chr2_3:28481773-28481792 None:intergenic 40.0%
GGTGGTTTCTTATAGGTTTC+TGG + chr2_3:28481910-28481929 None:intergenic 40.0%
GACACTGAAATCTTTGCAAG+TGG - chr2_3:28481954-28481973 Msa0286810:intron 40.0%
! GCCGGTTCAACTATTCAATT+TGG + chr2_3:28482398-28482417 None:intergenic 40.0%
ATTAGAGACTCTTCGGTTCA+TGG + chr2_3:28482425-28482444 None:intergenic 40.0%
TGTGAGTTATGGTTCAAACC+CGG + chr2_3:28482480-28482499 None:intergenic 40.0%
ACCTTCATACAAATCTCCGT+TGG - chr2_3:28482731-28482750 Msa0286810:intron 40.0%
TCCAACGGAGATTTGTATGA+AGG + chr2_3:28482735-28482754 None:intergenic 40.0%
AGCAATTGCTGTACTCACTA+TGG + chr2_3:28482889-28482908 None:intergenic 40.0%
ATAGTGAGTACAGCAATTGC+TGG - chr2_3:28482888-28482907 Msa0286810:intron 40.0%
GCAATTGCTGGAGCAATTAT+TGG - chr2_3:28482900-28482919 Msa0286810:intron 40.0%
GCAATTATTGGAGCAGCAAT+TGG - chr2_3:28482912-28482931 Msa0286810:intron 40.0%
ATTATTGGAGCAGCAATTGG+TGG - chr2_3:28482915-28482934 Msa0286810:intron 40.0%
ACAATGAGAGTAGCTGGATT+TGG + chr2_3:28483029-28483048 None:intergenic 40.0%
AATCCAGCTACTCTCATTGT+TGG - chr2_3:28483029-28483048 Msa0286810:intron 40.0%
! GGTAGAGTATTTGTTGGTCT+TGG - chr2_3:28483050-28483069 Msa0286810:intron 40.0%
!! GTATTTGTTGGTCTTGGTGT+AGG - chr2_3:28483056-28483075 Msa0286810:intron 40.0%
ATCTCCTTTGTATATCTCCG+AGG - chr2_3:28483094-28483113 Msa0286810:intron 40.0%
! CTCAACAGTTTTCTCATCAC+TGG - chr2_3:28483152-28483171 Msa0286810:intron 40.0%
! AACAGTTTTCTCATCACTGG+TGG - chr2_3:28483155-28483174 Msa0286810:intron 40.0%
!! CCAAGTTGATGAGATAGGAA+AGG + chr2_3:28483187-28483206 None:intergenic 40.0%
CCTTTCCTATCTCATCAACT+TGG - chr2_3:28483184-28483203 Msa0286810:intron 40.0%
!! AAAGGCCAAGTTGATGAGAT+AGG + chr2_3:28483192-28483211 None:intergenic 40.0%
! CATCAACTTGGCCTTTACTA+AGG - chr2_3:28483196-28483215 Msa0286810:intron 40.0%
TTGAACATGATTTCTCGCTC+AGG - chr2_3:28483308-28483327 Msa0286810:intron 40.0%
AGCACAATTTGTATCACAGC+AGG + chr2_3:28483375-28483394 None:intergenic 40.0%
AGGATGTTGAACTAACCTTG+CGG + chr2_3:28483434-28483453 None:intergenic 40.0%
GTCGTCTGACATTGATCAAA+TGG - chr2_3:28483539-28483558 Msa0286810:intron 40.0%
! GTTGATTGATGGTCGGATTT+GGG + chr2_3:28483577-28483596 None:intergenic 40.0%
!! AAGTTGCGTTGATTGATGGT+CGG + chr2_3:28483584-28483603 None:intergenic 40.0%
AACAATGTAACAGGGCAAAG+AGG - chr2_3:28483680-28483699 Msa0286810:intron 40.0%
GAAAAAGATATACGAGGTCG+AGG - chr2_3:28483722-28483741 Msa0286810:intron 40.0%
AGAGGTTTATATGCAGGTTG+TGG - chr2_3:28483849-28483868 Msa0286810:intron 40.0%
CTTCTGTCACTAATCACTTC+TGG - chr2_3:28483972-28483991 Msa0286810:intron 40.0%
ATTTCATTGACAAAACCGGG+AGG - chr2_3:28484027-28484046 Msa0286810:intron 40.0%
CGGTTAAAAGAGTCAAAGAG+AGG + chr2_3:28484088-28484107 None:intergenic 40.0%
AAGCGAAATTCATGCACCAA+TGG - chr2_3:28484121-28484140 Msa0286810:CDS 40.0%
CTTTCGATGACACTAACCAT+TGG + chr2_3:28484140-28484159 None:intergenic 40.0%
AGCACAAAATCCACAAGTAG+TGG + chr2_3:28484258-28484277 None:intergenic 40.0%
AAGAGATTTACCATGTCACC+AGG + chr2_3:28484284-28484303 None:intergenic 40.0%
TTCGAGATTAAACATGCACC+TGG + chr2_3:28484386-28484405 None:intergenic 40.0%
CATAGAGCATGGTACACAAA+AGG - chr2_3:28484437-28484456 Msa0286810:intron 40.0%
AAAGGTTGTCCTAGCAACTT+TGG - chr2_3:28484455-28484474 Msa0286810:intron 40.0%
GAATATGATGTAGAGTGCGA+GGG + chr2_3:28484498-28484517 None:intergenic 40.0%
AGAATATGATGTAGAGTGCG+AGG + chr2_3:28484499-28484518 None:intergenic 40.0%
CATATTCTTCTCACCTGGAA+TGG - chr2_3:28484511-28484530 Msa0286810:intron 40.0%
AATAGCATCAACAACGGTGT+GGG - chr2_3:28484598-28484617 Msa0286810:intron 40.0%
ATCCTTCTTGACTTTGACTG+TGG - chr2_3:28484643-28484662 Msa0286810:intron 40.0%
TTGACTTTGACTGTGGCAAT+TGG - chr2_3:28484650-28484669 Msa0286810:intron 40.0%
! TTTTGTGCCAGAGACTAAAG+GGG - chr2_3:28484736-28484755 Msa0286810:intron 40.0%
! CGTATGATTAGTTGGATTGC+TGG - chr2_3:28485093-28485112 Msa0286810:five_prime_UTR 40.0%
CTGTAGAGGATTGTGAAATG+AGG - chr2_3:28485131-28485150 Msa0286810:five_prime_UTR 40.0%
CACACCAACAATAGCATGGA+AGG - chr2_3:28479449-28479468 Msa0286810:three_prime_UTR 45.0%
ACCAACAATAGCATGGAAGG+AGG - chr2_3:28479452-28479471 Msa0286810:three_prime_UTR 45.0%
ACCTCCTTCCATGCTATTGT+TGG + chr2_3:28479456-28479475 None:intergenic 45.0%
!!! CTTCGTCTTGCTTTTTCTGC+TGG - chr2_3:28479542-28479561 Msa0286810:three_prime_UTR 45.0%
!! GCTTTTTCTGCTGGAATTGG+TGG - chr2_3:28479551-28479570 Msa0286810:three_prime_UTR 45.0%
!! GGAATTGGTGGCCTTCTTTT+TGG - chr2_3:28479563-28479582 Msa0286810:three_prime_UTR 45.0%
TATGAAGAAACAGAGGAGGG+TGG + chr2_3:28479615-28479634 None:intergenic 45.0%
TCGTAATTCTGACGTAGCGA+TGG + chr2_3:28479846-28479865 None:intergenic 45.0%
CATGTCTTCCTTTCTACTGC+TGG + chr2_3:28480432-28480451 None:intergenic 45.0%
CAGCAGTAGAAAGGAAGACA+TGG - chr2_3:28480430-28480449 Msa0286810:CDS 45.0%
AGAAAGGAAGACATGGCTTC+AGG - chr2_3:28480437-28480456 Msa0286810:CDS 45.0%
GTAACCCGATCCGGATTTAA+CGG - chr2_3:28480850-28480869 Msa0286810:intron 45.0%
! TCCATTGGTTGTTGGTGTTC+AGG + chr2_3:28481554-28481573 None:intergenic 45.0%
TGGAGATGGAGTAACATCGA+TGG + chr2_3:28481759-28481778 None:intergenic 45.0%
CTACCAACAATGAGAGTAGC+TGG + chr2_3:28483035-28483054 None:intergenic 45.0%
GAAGCCTCGGAGATATACAA+AGG + chr2_3:28483101-28483120 None:intergenic 45.0%
! AGAGCACCTCTAACTCTAGT+TGG + chr2_3:28483125-28483144 None:intergenic 45.0%
! GTCGGATTTGGGTTTCTATC+TGG + chr2_3:28483566-28483585 None:intergenic 45.0%
! CGTTGATTGATGGTCGGATT+TGG + chr2_3:28483578-28483597 None:intergenic 45.0%
CAGTCCTTCCATTGTTCAGT+TGG - chr2_3:28483920-28483939 Msa0286810:intron 45.0%
AAAACCGGCCAACTGAACAA+TGG + chr2_3:28483931-28483950 None:intergenic 45.0%
ACTTCTGGCCTCAATGCAAT+AGG - chr2_3:28483987-28484006 Msa0286810:intron 45.0%
CAATGCAAGTTTCTTCCTCC+CGG + chr2_3:28484045-28484064 None:intergenic 45.0%
AGTCAAAGAGAGGACAACAC+CGG + chr2_3:28484078-28484097 None:intergenic 45.0%
TAGCTGCTGTCTTGAACTCA+GGG + chr2_3:28484190-28484209 None:intergenic 45.0%
ATAGCTGCTGTCTTGAACTC+AGG + chr2_3:28484191-28484210 None:intergenic 45.0%
TGAAATTTGCAGACCAAGCC+AGG - chr2_3:28484365-28484384 Msa0286810:intron 45.0%
GATTAAACATGCACCTGGCT+TGG + chr2_3:28484381-28484400 None:intergenic 45.0%
GTTGTCCTAGCAACTTTGGT+TGG - chr2_3:28484459-28484478 Msa0286810:intron 45.0%
TGGAATGGGAACAGTTCCAT+GGG - chr2_3:28484526-28484545 Msa0286810:intron 45.0%
AGGTATAGAGGAATATGCGG+AGG - chr2_3:28484575-28484594 Msa0286810:intron 45.0%
CGGAGGAATAGCATCAACAA+CGG - chr2_3:28484592-28484611 Msa0286810:intron 45.0%
GAATAGCATCAACAACGGTG+TGG - chr2_3:28484597-28484616 Msa0286810:intron 45.0%
TGCCACAGTCAAAGTCAAGA+AGG + chr2_3:28484648-28484667 None:intergenic 45.0%
ATTGGAACCCCTTTAGTCTC+TGG + chr2_3:28484746-28484765 None:intergenic 45.0%
AGAGACTAAAGGGGTTCCAA+TGG - chr2_3:28484745-28484764 Msa0286810:intron 45.0%
ATACTCTCCACTTCCTCCAT+TGG + chr2_3:28484764-28484783 None:intergenic 45.0%
ATCAAAGTGACACCGCAACT+CGG + chr2_3:28484977-28484996 None:intergenic 45.0%
!! GTTGCGGTGTCACTTTGATT+TGG - chr2_3:28484978-28484997 Msa0286810:CDS 45.0%
!! TTATTTATATTATTATGTAA+AGG - chr2_3:28480341-28480360 Msa0286810:CDS 5.0%
!! CTTAAATAATATAAAAAAAT+TGG - chr2_3:28480644-28480663 Msa0286810:CDS 5.0%
! TCGATTGGTCCAATTGGGGA+TGG - chr2_3:28481507-28481526 Msa0286810:CDS 50.0%
TGTTGGGTACCATCCCCAAT+TGG + chr2_3:28481519-28481538 None:intergenic 50.0%
GCCTGAACACCAACAACCAA+TGG - chr2_3:28481550-28481569 Msa0286810:CDS 50.0%
TGTTAGTGTCGTGTCGTGTC+TGG - chr2_3:28481708-28481727 Msa0286810:intron 50.0%
TCTTCGGTTCATGGTTCAGC+CGG + chr2_3:28482416-28482435 None:intergenic 50.0%
ATTTACTGCCAGACGATGCC+CGG - chr2_3:28482767-28482786 Msa0286810:intron 50.0%
! TTAACATTCCGGGCATCGTC+TGG + chr2_3:28482778-28482797 None:intergenic 50.0%
TTGGAGCAGCAATTGGTGGA+TGG - chr2_3:28482919-28482938 Msa0286810:intron 50.0%
!! TGTTGGTCTTGGTGTAGGGA+TGG - chr2_3:28483061-28483080 Msa0286810:intron 50.0%
TGGTGTAGGGATGGCTTCAA+TGG - chr2_3:28483070-28483089 Msa0286810:intron 50.0%
AACTCTAGTTGGCGAAGCCT+CGG + chr2_3:28483114-28483133 None:intergenic 50.0%
GCTTCGCCAACTAGAGTTAG+AGG - chr2_3:28483116-28483135 Msa0286810:intron 50.0%
TACAACCAACGAGGTGACTC+GGG + chr2_3:28483411-28483430 None:intergenic 50.0%
GTACAACCAACGAGGTGACT+CGG + chr2_3:28483412-28483431 None:intergenic 50.0%
CCTTCCATTGTTCAGTTGGC+CGG - chr2_3:28483924-28483943 Msa0286810:intron 50.0%
!! TGTGGATTTTGTGCTGCTCC+TGG - chr2_3:28484263-28484282 Msa0286810:intron 50.0%
GCGATCCAACCAAAGTTGCT+AGG + chr2_3:28484467-28484486 None:intergenic 50.0%
CATGGAACTGTTCCCATTCC+AGG + chr2_3:28484527-28484546 None:intergenic 50.0%
CTGGAATGGGAACAGTTCCA+TGG - chr2_3:28484525-28484544 Msa0286810:intron 50.0%
GACTAAAGGGGTTCCAATGG+AGG - chr2_3:28484748-28484767 Msa0286810:intron 50.0%
CGGTGAATTTGTCCGAGTTG+CGG - chr2_3:28484962-28484981 Msa0286810:CDS 50.0%
GCAGAGCAAGCACATGTGTC+TGG - chr2_3:28481407-28481426 Msa0286810:CDS 55.0%
!! TCGGTGTCGGACACGACAAA+GGG + chr2_3:28481643-28481662 None:intergenic 55.0%
TGATTTCTCGCTCAGGCACC+AGG - chr2_3:28483315-28483334 Msa0286810:intron 55.0%
AACATCCACCTCCATGTGCC+TGG + chr2_3:28483336-28483355 None:intergenic 55.0%
GGCACATGGAGGTGGATGTT+AGG - chr2_3:28483336-28483355 Msa0286810:intron 55.0%
! ACCTCGTTGGTTGTACCGCA+AGG - chr2_3:28483416-28483435 Msa0286810:intron 55.0%
ACCTTGCGGTACAACCAACG+AGG + chr2_3:28483420-28483439 None:intergenic 55.0%
CCGGCCAACTGAACAATGGA+AGG + chr2_3:28483927-28483946 None:intergenic 55.0%
AGGGCTGAGTCCACTACTTG+TGG - chr2_3:28484245-28484264 Msa0286810:intron 55.0%
! TTGTGCTGCTCCTGGTGACA+TGG - chr2_3:28484271-28484290 Msa0286810:intron 55.0%
!! GCGGCGTTGATCATAGAGCA+TGG - chr2_3:28484426-28484445 Msa0286810:intron 55.0%
CTGTGGCAATTGGACCTGCT+TGG - chr2_3:28484660-28484679 Msa0286810:intron 55.0%
AGGGGTTCCAATGGAGGAAG+TGG - chr2_3:28484754-28484773 Msa0286810:intron 55.0%
!! GTCGGTGTCGGACACGACAA+AGG + chr2_3:28481644-28481663 None:intergenic 60.0%
CACTTCCCGAGTCACCTCGT+TGG - chr2_3:28483403-28483422 Msa0286810:intron 60.0%
TCGCTCAGGCACCAGGCACA+TGG - chr2_3:28483322-28483341 Msa0286810:intron 65.0%
CTCAGGCACCAGGCACATGG+AGG - chr2_3:28483325-28483344 Msa0286810:intron 65.0%
AGGCACCAGGCACATGGAGG+TGG - chr2_3:28483328-28483347 Msa0286810:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 28479322 28485209 28479322 ID=Msa0286810;Name=Msa0286810
chr2_3 mRNA 28479322 28485209 28479322 ID=Msa0286810-mRNA-1;Parent=Msa0286810;Name=Msa0286810-mRNA-1;_AED=0.04;_eAED=0.04;_QI=142|1|1|1|1|1|6|362|572
chr2_3 exon 28479322 28480154 28479322 ID=Msa0286810-mRNA-1:exon:10067;Parent=Msa0286810-mRNA-1
chr2_3 exon 28480239 28480838 28480239 ID=Msa0286810-mRNA-1:exon:10066;Parent=Msa0286810-mRNA-1
chr2_3 exon 28481094 28481201 28481094 ID=Msa0286810-mRNA-1:exon:10065;Parent=Msa0286810-mRNA-1
chr2_3 exon 28481314 28481649 28481314 ID=Msa0286810-mRNA-1:exon:10064;Parent=Msa0286810-mRNA-1
chr2_3 exon 28484073 28484143 28484073 ID=Msa0286810-mRNA-1:exon:10063;Parent=Msa0286810-mRNA-1
chr2_3 exon 28484935 28485209 28484935 ID=Msa0286810-mRNA-1:exon:10062;Parent=Msa0286810-mRNA-1
chr2_3 five_prime_UTR 28485068 28485209 28485068 ID=Msa0286810-mRNA-1:five_prime_utr;Parent=Msa0286810-mRNA-1
chr2_3 CDS 28484935 28485067 28484935 ID=Msa0286810-mRNA-1:cds;Parent=Msa0286810-mRNA-1
chr2_3 CDS 28484073 28484143 28484073 ID=Msa0286810-mRNA-1:cds;Parent=Msa0286810-mRNA-1
chr2_3 CDS 28481314 28481649 28481314 ID=Msa0286810-mRNA-1:cds;Parent=Msa0286810-mRNA-1
chr2_3 CDS 28481094 28481201 28481094 ID=Msa0286810-mRNA-1:cds;Parent=Msa0286810-mRNA-1
chr2_3 CDS 28480239 28480838 28480239 ID=Msa0286810-mRNA-1:cds;Parent=Msa0286810-mRNA-1
chr2_3 CDS 28479684 28480154 28479684 ID=Msa0286810-mRNA-1:cds;Parent=Msa0286810-mRNA-1
chr2_3 three_prime_UTR 28479322 28479683 28479322 ID=Msa0286810-mRNA-1:three_prime_utr;Parent=Msa0286810-mRNA-1
Gene Sequence

>Msa0286810

ATGGAAGGAGGTGTACCAGAAGCAGATATGTCTGCTTTCAGAGAATGTTTATCTCTATCATGGAAAAATCCTTATGTTCTTCGTCTTGCTTTTTCTGCTGGAATTGGTGGCCTTCTTTTTGGCTATGATACTGGAGTTATATCTGGAGCTCTTTTGTATATAAGAGATGAATTCCCAGCAGTAGAAAGGAAGACATGGCTTCAGGAAGCCATAGTGAGTACAGCAATTGCTGGAGCAATTATTGGAGCAGCAATTGGTGGATGGATCAATGATAGATTCGGAAGAAAAGTATCAATAATTGTTGCAGATACCCTCTTTTTAATAGGGTCAATTATCTTGGCTGCTGCTCCAAATCCAGCTACTCTCATTGTTGGTAGAGTATTTGTTGGTCTTGGTGTAGGGATGGCTTCAATGGCATCTCCTTTGTATATCTCCGAGGCTTCGCCAACTAGAGTTAGAGGTGCTCTTGTTAGTCTCAACAGTTTTCTCATCACTGGTGGACAGTTCCTTTCCTATCTCATCAACTTGGCCTTTACTAAGGCACCAGGCACATGGAGGTGGATGTTAGGAGTTGCAGCAGCACCTGCTGTGATACAAATTGTGCTCATGTTGTCACTTCCCGAGTCACCTCGTTGGTTGTACCGCAAGGGCAAAGAGGAAGAAGCAAAAGTAATTCTGAAAAAGATATACGAGGTCGAGGACTATGACAATGAAATTCAAGCATTGAAAGAATCAGTTGAAATGGAGCTTAAGGAAACAGAAAAAATCAGCATAATGCAGCTTCTAAAAACAACATCTGTTAGAAGAGGTTTATATGCAGGTTGTGGACTTGCATTTTTCCAACAATTTGTCGGTATCAACACTGTGATGTACTACAGTCCTTCCATTGTTCAGTTGGCCGGTTTTGCATCGAAAAGAACAGCACTTCTTCTGTCACTAATCACTTCTGGCCTCAATGCAATAGGTTCAATTTTGAGCATATATTTCATTGACAAAACCGGGAGGAAGAAACTTGCATTGATTAGTTTGACCGGTGTTGTCCTCTCTTTGACTCTTTTAACCGTTACTTTTCGTGAAAGCGAAATTCATGCACCAATGGTTAGTGTCATCGAAAGCTCTCATTTCAATAACACTAACACATGCCCTGAGTTCAAGACAGCAGCTATGAACAATCATAATTGGAATTGTATGAAGTGTATAAGGGCTGAGTCCACTACTTGTGGATTTTGTGCTGCTCCTGGTGACATGACCAAGCCAGGTGCATGTTTAATCTCGAATAAAAATACAGAAGATATTTGCGGCGTTGATCATAGAGCATGGTACACAAAAGGTTGTCCTAGCAACTTTGGTTGGATCGCTATAATAGCCCTCGCACTCTACATCATATTCTTCTCACCTGGAATGGGAACAGTTCCATGGGTTGTTAACTCTGAAATCTATCCATTGAGGTATAGAGGAATATGCGGAGGAATAGCATCAACAACGGTGTGGGTTTCTAACCTTGTTGTTTCACAATCCTTCTTGACTTTGACTGTGGCAATTGGACCTGCTTGGACTTTCATGATATTTGCAATCATTGCTATTGTTGCCATTTTCTTTGTCATCATTTTTGTGCCAGAGACTAAAGGGGTTCCAATGGAGGAAGTGGAGAGTATGCTTGAAAAGAGATTTGTGCAGATCAAGTTTTGGAAGAAGAGAGATTCTCCCTCTGAGAAATAA
Protein sequence

>Msa0286810

MEGGVPEADMSAFRECLSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDEFPAVERKTWLQEAIVSTAIAGAIIGAAIGGWINDRFGRKVSIIVADTLFLIGSIILAAAPNPATLIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNSFLITGGQFLSYLINLAFTKAPGTWRWMLGVAAAPAVIQIVLMLSLPESPRWLYRKGKEEEAKVILKKIYEVEDYDNEIQALKESVEMELKETEKISIMQLLKTTSVRRGLYAGCGLAFFQQFVGINTVMYYSPSIVQLAGFASKRTALLLSLITSGLNAIGSILSIYFIDKTGRKKLALISLTGVVLSLTLLTVTFRESEIHAPMVSVIESSHFNNTNTCPEFKTAAMNNHNWNCMKCIRAESTTCGFCAAPGDMTKPGACLISNKNTEDICGVDHRAWYTKGCPSNFGWIAIIALALYIIFFSPGMGTVPWVVNSEIYPLRYRGICGGIASTTVWVSNLVVSQSFLTLTVAIGPAWTFMIFAIIAIVAIFFVIIFVPETKGVPMEEVESMLEKRFVQIKFWKKRDSPSEK*