AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0164460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0164460 MtrunA17_Chr1g0173111 97.870 1033 22 0 1 1033 1 1033 0.0 2068
Msa0164460 MtrunA17_Chr8g0382071 78.252 1030 221 2 5 1031 6 1035 0.0 1680
Msa0164460 MtrunA17_Chr8g0355421 62.852 1031 374 4 1 1030 1 1023 0.0 1313
Msa0164460 MtrunA17_Chr5g0401211 64.665 1016 352 4 1 1011 1 1014 0.0 1313
Msa0164460 MtrunA17_Chr3g0134771 63.029 1017 369 5 1 1011 1 1016 0.0 1280
Msa0164460 MtrunA17_Chr4g0020551 69.108 874 264 4 71 939 5 877 0.0 1232
Msa0164460 MtrunA17_Chr4g0054021 64.668 934 323 3 81 1011 8 937 0.0 1213
Msa0164460 MtrunA17_Chr2g0298871 49.091 1045 465 16 13 1011 46 1069 0.0 904
Msa0164460 MtrunA17_Chr4g0002331 48.654 1040 487 15 11 1018 64 1088 0.0 895
Msa0164460 MtrunA17_Chr6g0456201 45.616 1015 498 16 37 1011 6 1006 0.0 839
Msa0164460 MtrunA17_Chr7g0260401 44.434 1024 522 15 19 1011 32 1039 0.0 779
Msa0164460 MtrunA17_Chr8g0340261 45.694 569 264 10 459 1011 2 541 2.22e-155 471
Msa0164460 MtrunA17_Chr8g0340271 48.724 392 188 6 79 457 55 446 1.67e-110 352
Msa0164460 MtrunA17_Chr2g0334231 43.534 464 236 7 11 461 54 504 5.87e-105 338
Msa0164460 MtrunA17_Chr7g0263361 31.891 878 487 25 109 900 24 876 1.37e-100 340
Msa0164460 MtrunA17_Chr8g0346461 28.146 1041 588 27 127 1022 28 1053 7.08e-94 322
Msa0164460 MtrunA17_Chr4g0005551 28.122 953 600 25 98 1011 61 967 1.31e-92 317
Msa0164460 MtrunA17_Chr5g0447521 26.633 980 625 25 73 1009 76 1004 2.48e-86 301
Msa0164460 MtrunA17_Chr3g0134951 29.029 968 572 24 131 1005 22 967 5.21e-86 299
Msa0164460 MtrunA17_Chr2g0334221 47.423 291 137 6 486 762 43 331 6.64e-67 229
Msa0164460 MtrunA17_Chr4g0072131 25.627 718 433 21 131 826 36 674 9.63e-52 197
Msa0164460 MtrunA17_Chr2g0334201 50.877 171 83 1 849 1018 1 171 1.38e-50 176
Msa0164460 MtrunA17_Chr2g0298031 25.210 714 442 19 131 826 38 677 1.55e-49 190
Msa0164460 MtrunA17_Chr2g0333721 25.612 695 440 20 131 819 31 654 8.16e-49 188
Msa0164460 MtrunA17_Chr8g0335291 26.068 702 433 21 131 819 35 663 1.87e-48 187
Msa0164460 MtrunA17_Chr8g0365021 25.989 708 443 21 131 826 103 741 2.42e-48 187
Msa0164460 MtrunA17_Chr4g0065481 25.702 712 440 19 131 826 34 672 6.40e-48 185
Msa0164460 MtrunA17_Chr3g0138931 25.211 710 444 19 132 826 34 671 1.33e-47 184
Msa0164460 MtrunA17_Chr1g0148031 24.754 711 448 19 131 826 33 671 3.97e-47 183
Msa0164460 MtrunA17_Chr1g0147981 24.544 713 447 18 131 826 50 688 1.03e-46 181
Msa0164460 MtrunA17_Chr8g0381711 25.546 779 476 27 115 857 14 724 1.65e-46 180
Msa0164460 MtrunA17_Chr2g0304941 24.579 712 448 18 131 826 34 672 2.40e-46 180
Msa0164460 MtrunA17_Chr4g0059961 25.000 700 438 22 131 819 37 660 1.24e-45 178
Msa0164460 MtrunA17_Chr6g0452721 24.536 701 438 22 132 819 36 658 8.81e-42 166
Msa0164460 MtrunA17_Chr7g0276551 24.882 422 269 8 400 819 46 421 8.35e-32 133
Msa0164460 MtrunA17_Chr4g0020561 56.044 91 39 1 942 1031 1 91 2.95e-26 103
Msa0164460 MtrunA17_Chr0c05g0492131 24.164 538 238 17 389 775 362 880 2.12e-19 94.7
Msa0164460 MtrunA17_Chr3g0078371 23.725 510 255 14 389 775 436 934 1.41e-17 88.6
Msa0164460 MtrunA17_Chr8g0374391 30.899 178 94 3 645 822 35 183 1.76e-17 83.2
Msa0164460 MtrunA17_Chr8g0374331 30.899 178 94 3 645 822 42 190 1.98e-17 83.2
Msa0164460 MtrunA17_Chr2g0297051 32.584 178 91 5 645 822 821 969 1.77e-16 85.1
Msa0164460 MtrunA17_Chr2g0297051 25.773 291 201 7 173 457 410 691 5.81e-11 67.0
Msa0164460 MtrunA17_Chr2g0324791 23.446 563 308 22 440 902 370 909 1.17e-15 82.4
Msa0164460 MtrunA17_Chr4g0052521 31.461 178 93 5 645 822 789 937 1.20e-15 82.0
Msa0164460 MtrunA17_Chr8g0363911 23.467 375 187 10 546 833 577 938 3.96e-15 80.5
Msa0164460 MtrunA17_Chr8g0368691 24.784 464 238 17 487 857 541 986 5.72e-15 80.1
Msa0164460 MtrunA17_Chr5g0397621 31.429 175 91 4 648 822 696 841 7.72e-15 79.3
Msa0164460 MtrunA17_Chr4g0020541 58.621 58 23 1 1 57 1 58 1.79e-14 69.3
Msa0164460 MtrunA17_Chr8g0339181 32.558 172 87 3 651 822 765 907 4.11e-14 77.0
Msa0164460 MtrunA17_Chr5g0415271 23.560 382 188 11 541 833 552 918 3.12e-13 74.3
Msa0164460 MtrunA17_Chr4g0071991 32.919 161 81 4 641 801 512 645 1.99e-12 71.6
Msa0164460 MtrunA17_Chr3g0091611 25.882 255 147 8 487 712 519 760 2.96e-12 71.2
Msa0164460 MtrunA17_Chr8g0342811 23.577 369 191 11 543 833 608 963 3.21e-12 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0164460 AT3G57330.1 72.233 1030 277 4 1 1030 1 1021 0.0 1543
Msa0164460 AT2G41560.1 71.969 1031 281 5 1 1030 1 1024 0.0 1540
Msa0164460 AT3G57330.2 73.663 972 247 4 59 1030 4 966 0.0 1488
Msa0164460 AT2G41560.2 74.489 929 229 5 103 1030 1 922 0.0 1433
Msa0164460 AT2G41560.3 74.489 929 229 5 103 1030 1 922 0.0 1433
Msa0164460 AT2G41560.4 74.489 929 229 5 103 1030 1 922 0.0 1433
Msa0164460 AT4G37640.1 62.697 1016 372 5 1 1011 1 1014 0.0 1279
Msa0164460 AT2G22950.1 62.930 1017 369 5 1 1011 1 1015 0.0 1279
Msa0164460 AT1G27770.4 62.242 1017 378 4 1 1011 1 1017 0.0 1271
Msa0164460 AT1G27770.1 62.242 1017 378 4 1 1011 1 1017 0.0 1271
Msa0164460 AT1G27770.3 64.209 936 332 2 79 1011 19 954 0.0 1215
Msa0164460 AT4G29900.1 49.855 1033 480 15 13 1019 37 1057 0.0 924
Msa0164460 AT4G29900.2 49.855 1033 480 15 13 1019 37 1057 0.0 924
Msa0164460 AT5G57110.1 48.790 1033 483 14 8 1011 32 1047 0.0 906
Msa0164460 AT5G57110.3 48.790 1033 483 14 8 1011 32 1047 0.0 906
Msa0164460 AT5G57110.2 48.790 1033 483 14 8 1011 32 1047 0.0 906
Msa0164460 AT3G21180.1 47.490 1036 500 15 8 1013 45 1066 0.0 888
Msa0164460 AT3G63380.1 44.935 997 513 18 34 1011 27 1006 0.0 773
Msa0164460 AT3G22910.1 45.802 941 469 14 93 1011 81 1002 0.0 744
Msa0164460 AT1G27770.2 54.401 693 309 5 1 687 1 692 0.0 711
Msa0164460 AT1G27770.2 70.874 309 90 0 703 1011 635 943 1.46e-148 467
Msa0164460 AT5G53010.1 34.289 1012 558 25 35 999 82 1033 1.41e-143 457
Msa0164460 AT1G07670.2 29.953 1055 598 30 101 1030 16 1054 2.63e-100 340
Msa0164460 AT1G07670.1 29.953 1055 598 30 101 1030 16 1054 2.63e-100 340
Msa0164460 AT1G07810.1 32.084 854 490 23 104 880 19 859 7.22e-98 333
Msa0164460 AT5G53010.2 32.906 702 438 18 35 717 82 769 3.00e-93 314
Msa0164460 AT4G00900.2 31.829 842 477 22 118 871 14 846 1.62e-92 318
Msa0164460 AT4G00900.1 31.829 842 477 22 118 871 14 846 1.62e-92 318
Msa0164460 AT1G10130.1 29.541 958 570 25 131 998 22 964 8.44e-90 310
Msa0164460 AT1G80660.3 24.929 702 436 19 131 819 36 659 9.42e-53 201
Msa0164460 AT1G80660.4 24.929 702 436 19 131 819 36 659 9.73e-53 201
Msa0164460 AT1G80660.1 24.929 702 436 19 131 819 36 659 2.33e-52 199
Msa0164460 AT3G60330.4 25.000 704 453 19 131 831 34 665 2.52e-50 193
Msa0164460 AT3G60330.3 25.000 704 453 19 131 831 34 665 2.52e-50 193
Msa0164460 AT3G60330.2 24.858 704 454 19 131 831 34 665 5.62e-50 192
Msa0164460 AT3G60330.1 24.858 704 454 19 131 831 34 665 5.62e-50 192
Msa0164460 AT1G80660.2 25.126 593 362 15 237 819 10 530 3.05e-48 186
Msa0164460 AT2G24520.3 24.613 711 449 20 131 826 13 651 1.07e-47 185
Msa0164460 AT2G24520.1 24.613 711 449 20 131 826 13 651 1.07e-47 185
Msa0164460 AT2G07560.1 24.552 725 431 18 131 826 34 671 1.47e-47 184
Msa0164460 AT2G24520.2 24.613 711 449 20 131 826 76 714 2.03e-47 184
Msa0164460 AT5G57350.4 25.421 712 442 23 131 826 32 670 8.02e-47 182
Msa0164460 AT5G57350.2 25.421 712 442 23 131 826 32 670 8.02e-47 182
Msa0164460 AT5G57350.1 25.421 712 442 23 131 826 32 670 8.02e-47 182
Msa0164460 AT3G42640.1 24.652 718 440 21 131 826 34 672 3.03e-46 181
Msa0164460 AT4G30190.1 25.983 712 438 25 131 826 31 669 4.20e-46 180
Msa0164460 AT1G17260.1 25.641 702 430 16 131 819 39 661 4.90e-46 180
Msa0164460 AT5G62670.1 24.857 700 439 21 131 819 35 658 3.31e-45 177
Msa0164460 AT2G18960.1 25.421 712 442 25 131 826 31 669 4.01e-45 177
Msa0164460 AT3G47950.1 25.499 702 432 24 131 819 39 662 1.42e-44 175
Msa0164460 AT3G47950.2 25.499 702 432 24 131 819 39 662 1.42e-44 175
Msa0164460 AT2G18960.3 26.202 603 365 21 237 826 70 605 1.30e-43 172
Msa0164460 AT2G18960.2 26.202 603 365 21 237 826 70 605 1.30e-43 172
Msa0164460 AT4G30190.2 25.101 745 436 27 131 826 31 702 4.78e-41 164
Msa0164460 AT5G57350.3 24.886 438 272 13 400 826 17 408 2.35e-32 135
Msa0164460 AT2G24520.4 24.201 438 275 12 400 826 17 408 1.19e-31 133
Msa0164460 AT5G44790.1 25.395 697 387 27 156 822 353 946 1.22e-30 131
Msa0164460 AT5G23630.1 21.538 715 430 26 134 769 167 829 7.13e-19 93.2
Msa0164460 AT4G33520.2 24.312 654 373 22 181 822 334 877 4.06e-18 90.5
Msa0164460 AT4G33520.3 24.387 652 371 22 181 820 334 875 6.60e-18 90.1
Msa0164460 AT1G68710.2 24.783 460 242 15 487 858 535 978 1.22e-17 89.4
Msa0164460 AT1G68710.1 24.783 460 242 15 487 858 535 978 1.22e-17 89.4
Msa0164460 AT1G68710.3 26.344 372 176 12 487 775 535 891 1.50e-17 89.0
Msa0164460 AT1G63440.1 31.461 178 93 3 645 822 787 935 1.09e-16 85.9
Msa0164460 AT1G26130.1 23.884 448 237 13 487 847 530 960 1.62e-16 85.5
Msa0164460 AT1G59820.1 24.890 454 226 15 468 833 499 925 3.62e-16 84.3
Msa0164460 AT5G04930.1 22.649 521 262 16 378 775 378 880 4.35e-16 84.3
Msa0164460 AT4G30110.1 31.606 193 94 7 618 801 481 644 7.33e-16 83.2
Msa0164460 AT4G30110.2 31.606 193 94 7 618 801 481 644 7.33e-16 83.2
Msa0164460 AT3G13900.1 25.373 469 238 17 489 858 539 994 9.62e-16 83.2
Msa0164460 AT1G26130.2 22.545 448 244 11 487 847 530 961 4.40e-15 80.9
Msa0164460 AT1G26130.4 22.545 448 244 11 487 847 530 961 4.40e-15 80.9
Msa0164460 AT1G26130.3 22.545 448 244 11 487 847 530 961 4.40e-15 80.9
Msa0164460 AT1G17500.2 22.899 476 252 15 484 858 514 975 1.74e-14 79.0
Msa0164460 AT1G17500.1 22.899 476 252 15 484 858 514 975 1.74e-14 79.0
Msa0164460 AT3G13900.3 25.455 385 182 14 489 778 539 913 1.64e-13 75.9
Msa0164460 AT3G13900.2 25.722 381 177 14 489 775 539 907 3.13e-13 74.7
Msa0164460 AT1G72700.1 23.869 398 208 11 543 858 603 987 3.39e-13 74.7
Msa0164460 AT1G72700.3 23.869 398 208 11 543 858 603 987 3.39e-13 74.7
Msa0164460 AT1G72700.2 23.869 398 208 11 543 858 603 987 3.39e-13 74.7
Msa0164460 AT4G11730.1 22.343 367 242 10 118 474 23 356 6.70e-13 73.6
Msa0164460 AT1G13210.1 24.408 422 213 18 389 718 367 774 3.33e-12 71.6
Msa0164460 AT2G19110.2 24.549 277 161 8 608 878 481 715 4.55e-12 71.2
Msa0164460 AT2G19110.3 24.549 277 161 8 608 878 481 715 4.55e-12 71.2
Msa0164460 AT2G19110.1 24.549 277 161 8 608 878 481 715 4.55e-12 71.2
Msa0164460 AT5G21930.4 27.753 227 151 6 245 466 345 563 3.71e-11 67.8
Msa0164460 AT5G21930.2 27.753 227 151 6 245 466 345 563 4.60e-11 67.8
Msa0164460 AT5G21930.1 27.753 227 151 6 245 466 345 563 4.60e-11 67.8

Find 239 sgRNAs with CRISPR-Local

Find 656 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGAATTTGGCTTGGTTTC+AGG 0.141946 1_4:-43937797 Msa0164460:CDS
ATATGGTGGTTGATAAAATT+TGG 0.156993 1_4:-43938000 Msa0164460:CDS
GGTGAGGTTGTTGCTGTTAC+TGG 0.165535 1_4:-43937064 Msa0164460:CDS
GAACAAAATCACACTCTTTC+AGG 0.173208 1_4:+43934816 None:intergenic
GAATCAGCAATATTGGAATT+TGG 0.218100 1_4:-43937809 Msa0164460:CDS
ATCTCTGCAGTTCTTAGATT+TGG 0.221817 1_4:-43938722 Msa0164460:CDS
TGGTTACTCAGTTTGTTATT+TGG 0.231534 1_4:-43934939 Msa0164460:CDS
GCTTTGGGTTAACTTGATTA+TGG 0.233906 1_4:-43936109 Msa0164460:CDS
CATAGTAGGCAAGAGATTTA+TGG 0.239169 1_4:-43938964 Msa0164460:CDS
AATGGAGTTGCTACAGTAAT+TGG 0.246434 1_4:-43938343 Msa0164460:CDS
TCCCTCTAACCTGGCAATTC+TGG 0.255781 1_4:-43934959 Msa0164460:CDS
CTATTGTCAAAGTGGCAAAA+TGG 0.256670 1_4:-43936350 Msa0164460:CDS
TCTTTCTGCTTGTGAGACTA+TGG 0.268004 1_4:-43938074 Msa0164460:CDS
CTTTGATGTGCTACACGTTT+TGG 0.272434 1_4:-43934631 Msa0164460:three_prime_UTR
ACCTCCTAATGATGGACTTA+TGG 0.285968 1_4:-43936055 Msa0164460:CDS
CACTCTTGGTGCATTGGCTT+TGG 0.289511 1_4:-43936085 Msa0164460:CDS
TAACTGCTGTTCAATTGCTT+TGG 0.292272 1_4:-43936125 Msa0164460:CDS
AATCTTACTTAGTATATTCT+TGG 0.297442 1_4:-43938779 Msa0164460:CDS
CGGGATGTTGGTTTCTCCTT+GGG 0.301579 1_4:+43937484 None:intergenic
GGTTATGAGGCACTGCCTTC+TGG 0.301784 1_4:-43934840 Msa0164460:CDS
CTCAACCTTAAGTACCTTAC+AGG 0.303221 1_4:+43937748 None:intergenic
AATCTCTGATTTCAACTTAT+CGG 0.303785 1_4:+43937937 None:intergenic
CCAACATCAGGGAAAGTTTC+GGG 0.306198 1_4:-43944884 Msa0164460:five_prime_UTR
GAGAACAGAACCTGAATTCT+AGG 0.312715 1_4:+43937224 None:intergenic
AGAAAAGCAGAAGAAAATTC+AGG 0.312793 1_4:-43944235 Msa0164460:intron
AAGACTAGAGCAGCTGGTTT+TGG 0.314718 1_4:-43939120 Msa0164460:CDS
CCGGGATGTTGGTTTCTCCT+TGG 0.315499 1_4:+43937483 None:intergenic
ACCAACAGAATCAGCAATAT+TGG 0.321328 1_4:-43937816 Msa0164460:CDS
AACTGCTGTTCAATTGCTTT+GGG 0.324794 1_4:-43936124 Msa0164460:CDS
TGAAAGGATACCTTGAATTC+AGG 0.328357 1_4:+43944550 None:intergenic
ACAATCTTTGCTTTCTCTTC+AGG 0.328550 1_4:+43937581 None:intergenic
AAATGCTGATGTCATTATAA+TGG 0.331729 1_4:-43936388 Msa0164460:CDS
TTGAGTACAGCAGTTGAATC+TGG 0.332181 1_4:+43935895 None:intergenic
TGATTTCAAGAACTATAAAA+AGG 0.332297 1_4:-43939058 Msa0164460:CDS
AGAAGGAAAACAGACAATAC+TGG 0.344901 1_4:-43937843 Msa0164460:CDS
CTTAACACTGATCATTCTAA+TGG 0.353334 1_4:-43938875 Msa0164460:CDS
TATTGTCAAAGTGGCAAAAT+GGG 0.358319 1_4:-43936349 Msa0164460:CDS
GGACTTGCCATGGGCATTGC+CGG 0.359215 1_4:-43936998 Msa0164460:CDS
ACACCATCATAAACACCTTT+TGG 0.360503 1_4:+43938805 None:intergenic
TTTCAACTGGTATGCATTTG+AGG 0.370033 1_4:+43934889 None:intergenic
TTCTTGAGCTAGAGCACGTT+TGG 0.372947 1_4:+43944254 None:intergenic
GCTACAGTAATTGGTAAAAT+CGG 0.373750 1_4:-43938334 Msa0164460:CDS
TCCTGTGCGCCCTGGAGTTA+AGG 0.379401 1_4:-43937420 Msa0164460:CDS
TTCCATAAGCTAATTCAAAC+TGG 0.380157 1_4:-43944608 Msa0164460:intron
TTCTTCTGATAACCAACATC+AGG 0.386107 1_4:-43944896 Msa0164460:five_prime_UTR
AAAGAGTTCTCAAAGCTTCA+TGG 0.388729 1_4:+43937534 None:intergenic
CTTTCCATAAGTCCATCATT+AGG 0.389201 1_4:+43936051 None:intergenic
AGCTTTGAGAACTCTTTGTT+TGG 0.397094 1_4:-43937528 Msa0164460:CDS
ACCAACATCAGGGAAAGTTT+CGG 0.397222 1_4:-43944885 Msa0164460:five_prime_UTR
GGATATCATACCTAGAATTC+AGG 0.399897 1_4:-43937234 Msa0164460:intron
GTTGTGGTATCTCTTTCAAC+TGG 0.401862 1_4:+43934876 None:intergenic
AAACTTGCTTTCTTTCCAAC+TGG 0.405916 1_4:+43936024 None:intergenic
GATATAGTTCATTTGTCAAC+TGG 0.406736 1_4:-43938616 Msa0164460:CDS
TCAATTTATGACTTGGTAGT+TGG 0.408891 1_4:-43938640 Msa0164460:CDS
CAATCGAAGCTCTCACTAGA+TGG 0.409264 1_4:-43944338 Msa0164460:CDS
ACAGCTAACGGTAATCCTTC+AGG 0.409892 1_4:+43938157 None:intergenic
ACCAATATCAGGGAAAGCTT+CGG 0.412810 1_4:-43939471 Msa0164460:intron
AGTAATCATAGTTGAGTTCC+TGG 0.415421 1_4:-43935000 Msa0164460:CDS
TATATTTCAGAATACTTCTT+CGG 0.415739 1_4:-43937882 Msa0164460:CDS
GATATTCCTCCACATTGGTT+TGG 0.417862 1_4:+43935996 None:intergenic
ATAGTAGGCAAGAGATTTAT+GGG 0.418505 1_4:-43938963 Msa0164460:CDS
CCAATATCAGGGAAAGCTTC+GGG 0.418828 1_4:-43939470 Msa0164460:intron
ATCAAAGTATATCCATTCTC+CGG 0.419839 1_4:+43937464 None:intergenic
ATTGTGAATGACATTATAGA+TGG 0.421348 1_4:-43937563 Msa0164460:CDS
TATGGACACTCTTGGTGCAT+TGG 0.423778 1_4:-43936091 Msa0164460:CDS
ACCACAAGTCTTCTAGATCT+AGG 0.424853 1_4:-43944728 Msa0164460:five_prime_UTR
ATCGATGGAAGGTTATCTTA+AGG 0.425469 1_4:-43944388 Msa0164460:exon
CGCTTGACCATCTTGCACTT+TGG 0.430081 1_4:+43938468 None:intergenic
TTCGTTTCTGCATGCATCAC+TGG 0.436974 1_4:-43936249 Msa0164460:intron
ATTGATGAATCAAGTTTGTC+AGG 0.437900 1_4:-43938544 Msa0164460:CDS
CACCAAACATATTCCTCAAA+CGG 0.439529 1_4:+43937083 None:intergenic
CTTCGATTGTCTATATCTAC+AGG 0.439863 1_4:+43938511 None:intergenic
AACCAGAATTGCCAGGTTAG+AGG 0.444158 1_4:+43934957 None:intergenic
TATTGGTACACCTGAATTCA+AGG 0.447099 1_4:-43939151 Msa0164460:CDS
TAGATCCTGTAAGGTACTTA+AGG 0.447999 1_4:-43937753 Msa0164460:CDS
AAAATACTTTGGTGAGAAGT+TGG 0.448100 1_4:+43934684 None:intergenic
ATGGAGAACTGCCGTTACTT+TGG 0.448289 1_4:-43944319 Msa0164460:CDS
TAAGCTAATTCAAACTGGTC+TGG 0.448541 1_4:-43944603 Msa0164460:five_prime_UTR
ATCGAATCGATTCAAAAGAT+AGG 0.451177 1_4:+43944702 None:intergenic
AGCAATATTGGAATTTGGCT+TGG 0.452620 1_4:-43937804 Msa0164460:CDS
TTATCTTAAGGATTTCGAAT+TGG 0.455036 1_4:-43944376 Msa0164460:CDS
GATAGCCATTGTGGGAATCA+AGG 0.456922 1_4:-43937444 Msa0164460:CDS
ACCCGTTTGAGGAATATGTT+TGG 0.457502 1_4:-43937085 Msa0164460:CDS
AGCAATTGAACAGCAGTTAG+TGG 0.459466 1_4:+43936129 None:intergenic
ATGTCTGACTCGTGCAGTGC+AGG 0.459614 1_4:+43937022 None:intergenic
TTGTATCAACTGATTGTCCT+TGG 0.461000 1_4:-43935961 Msa0164460:CDS
CTTTCTGCTTGTGAGACTAT+GGG 0.464616 1_4:-43938073 Msa0164460:CDS
GAGGGAGGTGTAGCTATAGA+AGG 0.464787 1_4:-43937293 Msa0164460:CDS
TATTGGTATACCTGAATTCA+AGG 0.466916 1_4:-43944560 Msa0164460:intron
TGAATGAAAATTCCATCAGC+TGG 0.468842 1_4:+43938583 None:intergenic
GTGCTAGTGGGTCTTCCTGA+TGG 0.469570 1_4:-43937695 Msa0164460:CDS
TGAACAGCTTCCTTAACTCC+AGG 0.470425 1_4:+43937410 None:intergenic
TGTGGGAATCCCTATGCCTA+TGG 0.471986 1_4:+43938837 None:intergenic
CTTTAGTTTCCATAGGCATA+GGG 0.475858 1_4:-43938846 Msa0164460:CDS
TCAGAGGCATGTTTGACAGC+TGG 0.476043 1_4:-43935061 Msa0164460:CDS
CCCGAAACTTTCCCTGATGT+TGG 0.476413 1_4:+43944884 None:intergenic
CCCACAGAAGGGTGGCCAAA+AGG 0.478654 1_4:-43938820 Msa0164460:CDS
ACCAAACATATTCCTCAAAC+GGG 0.479261 1_4:+43937084 None:intergenic
TAGTGGGTCTTCCTGATGGA+GGG 0.479276 1_4:-43937691 Msa0164460:CDS
GAAACCAACATCCCGGAGAA+TGG 0.480331 1_4:-43937476 Msa0164460:CDS
TCTATTCATGTTACCAGGGA+TGG 0.481195 1_4:-43938679 Msa0164460:CDS
CCAGCACTGTCCCTCTAACC+TGG 0.481218 1_4:-43934968 Msa0164460:CDS
TCCTTAACTCCAGGGCGCAC+AGG 0.483869 1_4:+43937419 None:intergenic
GAAGAAGATGTCGGTGCTAG+TGG 0.484386 1_4:-43937708 Msa0164460:CDS
CCACTGCAGGTGAAATTGAA+TGG 0.486294 1_4:-43938361 Msa0164460:CDS
AGATTTCTATTCATGTTACC+AGG 0.486602 1_4:-43938684 Msa0164460:CDS
GTTGTTGCTGTTACTGGTGA+TGG 0.492352 1_4:-43937058 Msa0164460:CDS
CTAGAGACAAACCTCGGTTC+CGG 0.492595 1_4:+43936979 None:intergenic
GCTTTAGTTTCCATAGGCAT+AGG 0.492724 1_4:-43938847 Msa0164460:CDS
CTAGTGGGTCTTCCTGATGG+AGG 0.496303 1_4:-43937692 Msa0164460:CDS
ATCAAGGATCCTGTGCGCCC+TGG 0.496490 1_4:-43937428 Msa0164460:CDS
ATACCTTGGTAACCCGTTTG+AGG 0.501202 1_4:-43937096 Msa0164460:CDS
AAAGCTCGGACCCCTCCATC+AGG 0.501465 1_4:+43937680 None:intergenic
AAAAGGTTGGTGAAGTTCAA+GGG 0.503522 1_4:-43939041 Msa0164460:CDS
TAGATGGTTTCTCGGTATAA+CGG 0.503563 1_4:+43938935 None:intergenic
TTGGTTCCCGAAAGAAGAAA+AGG 0.505699 1_4:+43938487 None:intergenic
TCTGAAATATAGCCTGCAAA+AGG 0.510920 1_4:+43937894 None:intergenic
CCATTCAATTTCACCTGCAG+TGG 0.511766 1_4:+43938361 None:intergenic
AACTTGATTATGGACACTCT+TGG 0.513459 1_4:-43936099 Msa0164460:CDS
GGGGTCCGAGCTTTCTGCAA+AGG 0.516979 1_4:-43937671 Msa0164460:CDS
CTCGGTTCCGGCAATGCCCA+TGG 0.517874 1_4:+43936991 None:intergenic
TCAGACAGATTGCGAAACTC+TGG 0.517887 1_4:+43937269 None:intergenic
GATAAAATCATTGATAGTAA+TGG 0.518109 1_4:-43937620 Msa0164460:CDS
AAAGCATCATGATGGTTATG+AGG 0.519175 1_4:-43934853 Msa0164460:CDS
ACCAGAATTGCCAGGTTAGA+GGG 0.520569 1_4:+43934958 None:intergenic
TGCATTTGCACTGATAAGAC+AGG 0.521747 1_4:-43938040 Msa0164460:CDS
CTTTCCGTCTCAGTTGATGA+AGG 0.524811 1_4:-43939006 Msa0164460:CDS
GCTACTGAACCTCCTAATGA+TGG 0.526045 1_4:-43936063 Msa0164460:CDS
TTCTTCCTGTCTGAATTGAA+AGG 0.527349 1_4:+43937725 None:intergenic
TCCAATATTGCTGATTCTGT+TGG 0.527643 1_4:+43937815 None:intergenic
AGCTGTATTTATGTTATCGC+CGG 0.528457 1_4:+43937349 None:intergenic
TTTATCAACCACCATATGGT+TGG 0.532379 1_4:+43938006 None:intergenic
GGTGATCAAGTTCCAGCTGA+TGG 0.533497 1_4:-43938595 Msa0164460:CDS
TCAGAAAAGACTAGAGCAGC+TGG 0.535230 1_4:-43939126 Msa0164460:CDS
CTTCACTACTATTGTCAAAG+TGG 0.537544 1_4:-43936358 Msa0164460:CDS
AAGAGGCTGCTGGGACTAAG+TGG 0.538097 1_4:-43935919 Msa0164460:CDS
TTAATGGAGACTTCGCTAGT+TGG 0.538476 1_4:-43938249 Msa0164460:CDS
TTTGAGGGGAAGAGGCTGCT+GGG 0.539430 1_4:-43935928 Msa0164460:CDS
GCCTCTTGACAAGCATACCT+TGG 0.541001 1_4:-43937110 Msa0164460:CDS
TCGATTGATTTATAGAGAAG+TGG 0.544358 1_4:-43944684 Msa0164460:five_prime_UTR
GTGCTGCTCTGCTCGTTGAA+CGG 0.544766 1_4:+43944852 None:intergenic
CCAATGTGGAGGAATATCTT+CGG 0.544789 1_4:-43935991 Msa0164460:CDS
TGCACAGCGTAGATCCTGTA+AGG 0.546342 1_4:-43937762 Msa0164460:CDS
TCCATAAGTCCATCATTAGG+AGG 0.546893 1_4:+43936054 None:intergenic
ATAAGCGTTCGCATGGTCAC+CGG 0.547578 1_4:-43937368 Msa0164460:CDS
AGTGGGTCTTCCTGATGGAG+GGG 0.548458 1_4:-43937690 Msa0164460:CDS
GTCAAGACAGTATACATAGT+AGG 0.550089 1_4:-43938978 Msa0164460:CDS
AACGTTGACGACCAACCATA+TGG 0.550519 1_4:-43938017 Msa0164460:CDS
GAAGGTTTCAATTTATGACT+TGG 0.554161 1_4:-43938647 Msa0164460:CDS
ACAACTGATGCAATATCATC+CGG 0.554785 1_4:+43939090 None:intergenic
TTGAGCCTTTCAATTCAGAC+AGG 0.555436 1_4:-43937730 Msa0164460:CDS
AAGATGATAGTTACAACTGT+TGG 0.555634 1_4:-43938445 Msa0164460:CDS
GGATTTCGAATTGGAAGACA+AGG 0.556134 1_4:-43944367 Msa0164460:CDS
ATGCACCTTTGCAGAAAGCT+CGG 0.556163 1_4:+43937666 None:intergenic
GAAGTAGTTAAAGACAAAGA+AGG 0.556974 1_4:-43937860 Msa0164460:CDS
AACTGAGTGGGGAAAGCTGA+TGG 0.557224 1_4:-43938416 Msa0164460:CDS
TCAAAGTATATCCATTCTCC+GGG 0.557569 1_4:+43937465 None:intergenic
CTTTGGTGAGAAGTTGGTGT+GGG 0.557854 1_4:+43934690 None:intergenic
ATATCCATTCTCCGGGATGT+TGG 0.558522 1_4:+43937472 None:intergenic
GTCAGACATTGGACTTGCCA+TGG 0.558667 1_4:-43937008 Msa0164460:CDS
AAAGGTGTTTATGATGGTGT+TGG 0.559324 1_4:-43938802 Msa0164460:CDS
CCAGGTTAGAGGGACAGTGC+TGG 0.560785 1_4:+43934968 None:intergenic
CTTCGCTAGTTGGTCTTCAG+AGG 0.562517 1_4:-43938239 Msa0164460:CDS
TGAGTACAGCAGTTGAATCT+GGG 0.563625 1_4:+43935896 None:intergenic
CCGAAGATATTCCTCCACAT+TGG 0.563999 1_4:+43935991 None:intergenic
GTTTGTGCTTTAGTTTCCAT+AGG 0.564675 1_4:-43938853 Msa0164460:CDS
ATAGTTGTTGCGATTCCTGA+AGG 0.565563 1_4:-43938172 Msa0164460:CDS
GAAGGAAAACAGACAATACT+GGG 0.566868 1_4:-43937842 Msa0164460:CDS
GTGCAGTGCAGGAGCATCGT+TGG 0.567070 1_4:+43937033 None:intergenic
CATGGGCATTGCCGGAACCG+AGG 0.567496 1_4:-43936990 Msa0164460:intron
TGGTCAAGAATCCTCGTCGA+AGG 0.567998 1_4:-43944299 Msa0164460:CDS
CAAAGTGGCAAAATGGGGAC+GGG 0.568035 1_4:-43936343 Msa0164460:CDS
GCACTGCACGAGTCAGACAT+TGG 0.570157 1_4:-43937019 Msa0164460:CDS
CAGTGCTGGCAAATGTTCCC+AGG 0.571108 1_4:+43934982 None:intergenic
TATACTTTGATAGCCATTGT+GGG 0.571307 1_4:-43937452 Msa0164460:CDS
TCTGTCTGAGGAGCAAATGA+AGG 0.571811 1_4:-43937255 Msa0164460:CDS
GGCATAGGGATTCCCACAGA+AGG 0.576706 1_4:-43938832 Msa0164460:CDS
AGACTAAGTGTTACAGCTAA+CGG 0.576798 1_4:+43938145 None:intergenic
CCTCAAAATTTAGAACTCCA+AGG 0.577224 1_4:+43935944 None:intergenic
TCAGACATTGGACTTGCCAT+GGG 0.578262 1_4:-43937007 Msa0164460:CDS
TCTTCTGATAACCAACATCA+GGG 0.578610 1_4:-43944895 Msa0164460:five_prime_UTR
AAGAGTTCTCAAAGCTTCAT+GGG 0.579933 1_4:+43937535 None:intergenic
GAATTTGGCTTGGTTTCAGG+TGG 0.579993 1_4:-43937794 Msa0164460:CDS
CAGGGATGGTAAAAGACAGA+AGG 0.579994 1_4:-43938665 Msa0164460:CDS
AGCAGGAATAAGCGTTCGCA+TGG 0.580994 1_4:-43937375 Msa0164460:CDS
TCCTAGATCTAGAAGACTTG+TGG 0.583451 1_4:+43944727 None:intergenic
TCAAAGTGGCAAAATGGGGA+CGG 0.583944 1_4:-43936344 Msa0164460:CDS
ACTGAGTAACCAGAATTGCC+AGG 0.585448 1_4:+43934950 None:intergenic
GAACAGCTTCCTTAACTCCA+GGG 0.587962 1_4:+43937411 None:intergenic
AGAAGATGAGACTCCACTGC+AGG 0.588851 1_4:-43938374 Msa0164460:CDS
CATTTGAGGATAGCAGCTAA+AGG 0.593737 1_4:+43934903 None:intergenic
CCAAGGAGAAACCAACATCC+CGG 0.595574 1_4:-43937483 Msa0164460:CDS
ATATACTTTGATAGCCATTG+TGG 0.597537 1_4:-43937453 Msa0164460:CDS
AAGAAGATGTCGGTGCTAGT+GGG 0.598729 1_4:-43937707 Msa0164460:CDS
AACTATTATAGTTACAGCAA+TGG 0.598887 1_4:+43938189 None:intergenic
GTAATCATAGTTGAGTTCCT+GGG 0.601720 1_4:-43934999 Msa0164460:CDS
CTGATGGAAACTTTGAGTGA+GGG 0.603028 1_4:-43938400 Msa0164460:CDS
CGATAACATAAATACAGCTA+AGG 0.604960 1_4:-43937345 Msa0164460:CDS
GACACCTTCATCAACTGAGA+CGG 0.606673 1_4:+43939002 None:intergenic
ACCACAACAAAGCATCATGA+TGG 0.607396 1_4:-43934861 Msa0164460:CDS
GCTGATGGAAACTTTGAGTG+AGG 0.609051 1_4:-43938401 Msa0164460:CDS
GGTATGCTTGTCAAGAGGCA+AGG 0.609665 1_4:+43937114 None:intergenic
GATTTCTATTCATGTTACCA+GGG 0.614762 1_4:-43938683 Msa0164460:CDS
TCGGGAACCAAAGTGCAAGA+TGG 0.617459 1_4:-43938475 Msa0164460:CDS
ATGGAAACTTTGAGTGAGGG+AGG 0.617992 1_4:-43938397 Msa0164460:CDS
CACACTCTTTCAGGACCAGA+AGG 0.618029 1_4:+43934825 None:intergenic
TTATTACCAAACCAATGTGG+AGG 0.619808 1_4:-43936002 Msa0164460:CDS
CTTATGGAAAGACAACCAGT+TGG 0.619856 1_4:-43936039 Msa0164460:CDS
TGTTGGCATGAGAACTGAGT+GGG 0.623986 1_4:-43938428 Msa0164460:CDS
GAAAAGATAAACATATTCAG+AGG 0.624433 1_4:-43935077 Msa0164460:CDS
AACAGATTGAAATCGATGGA+AGG 0.624749 1_4:-43944399 Msa0164460:exon
AGGATCCTTGATTCCCACAA+TGG 0.625525 1_4:+43937439 None:intergenic
AGAATGCGGTATACTTACTG+AGG 0.629838 1_4:-43937312 Msa0164460:CDS
GCATAGGGATTCCCACAGAA+GGG 0.634175 1_4:-43938831 Msa0164460:CDS
AGAGTTTCGCAATCTGTCTG+AGG 0.634441 1_4:-43937267 Msa0164460:CDS
TGGCCAAAAGGTGTTTATGA+TGG 0.634795 1_4:-43938808 Msa0164460:CDS
TTTGAGGAATATGTTTGGTG+AGG 0.643337 1_4:-43937080 Msa0164460:CDS
ACCAAGGTATGCTTGTCAAG+AGG 0.643745 1_4:+43937109 None:intergenic
AGGATTCTTGACCAAAGTAA+CGG 0.644536 1_4:+43944308 None:intergenic
GAAAAGACTGTGGAGATGAA+AGG 0.645618 1_4:-43937971 Msa0164460:CDS
ATTCCTCAAACGGGTTACCA+AGG 0.648170 1_4:+43937093 None:intergenic
ATTGTCAAAGTGGCAAAATG+GGG 0.650955 1_4:-43936348 Msa0164460:CDS
ACCATCATGATGCTTTGTTG+TGG 0.652131 1_4:+43934860 None:intergenic
TTCAGACAGGAAGAAGATGT+CGG 0.657425 1_4:-43937717 Msa0164460:CDS
TTGGATATGTGAAAAGACTG+TGG 0.658651 1_4:-43937981 Msa0164460:CDS
ACTTTGGTGAGAAGTTGGTG+TGG 0.658737 1_4:+43934689 None:intergenic
CATTACCTGGCAAAATACAA+AGG 0.660091 1_4:+43935855 None:intergenic
GAATGCGGTATACTTACTGA+GGG 0.662028 1_4:-43937311 Msa0164460:CDS
TGCGGTATACTTACTGAGGG+AGG 0.662412 1_4:-43937308 Msa0164460:CDS
TAGGGATTCCCACAGAAGGG+TGG 0.670339 1_4:-43938828 Msa0164460:CDS
AAAGACATAGATGAAACCCA+AGG 0.685479 1_4:-43937500 Msa0164460:CDS
GTTGACGACCAACCATATGG+TGG 0.691126 1_4:-43938014 Msa0164460:CDS
ATGCAGTGCTGCTCGTTGAG+CGG 0.695225 1_4:+43939438 None:intergenic
ACGTTTCGAAACCTTCGACG+AGG 0.709127 1_4:+43944288 None:intergenic
AAGGCTATAGCTAAAGAATG+CGG 0.709220 1_4:-43937326 Msa0164460:CDS
GATTACTTGAAATACCGCTG+TGG 0.733358 1_4:+43935016 None:intergenic
AAGTGTTATTCTCGCCACAG+CGG 0.737214 1_4:-43935030 Msa0164460:CDS
CTGTTGGCATGAGAACTGAG+TGG 0.779758 1_4:-43938429 Msa0164460:CDS
GTTGGCATGAGAACTGAGTG+GGG 0.801756 1_4:-43938427 Msa0164460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGAAAAATGTATAAATAA+AGG - chr1_4:43935566-43935585 Msa0164460:intron 10.0%
!!! ATATTAATAACATAACTTTT+TGG - chr1_4:43936075-43936094 Msa0164460:CDS 10.0%
!! TTTAATAAAAAATTGTGTAA+TGG + chr1_4:43936667-43936686 None:intergenic 10.0%
!!! TAAAATAATCATTATTTTGT+TGG - chr1_4:43936683-43936702 Msa0164460:intron 10.0%
!! ATTTAGTGTTATATTATATT+GGG + chr1_4:43937868-43937887 None:intergenic 10.0%
!! TATTTAGTGTTATATTATAT+TGG + chr1_4:43937869-43937888 None:intergenic 10.0%
!! TAATTTAATATTATGCAATA+GGG + chr1_4:43938240-43938259 None:intergenic 10.0%
!!! AGTGTTATTTAAATTAAATT+TGG - chr1_4:43938382-43938401 Msa0164460:CDS 10.0%
!!! GTGTTATTTAAATTAAATTT+GGG - chr1_4:43938383-43938402 Msa0164460:CDS 10.0%
!!! TTTTATAGTATTAACATTAT+TGG - chr1_4:43938573-43938592 Msa0164460:CDS 10.0%
!! TTTATAGTATTAACATTATT+GGG - chr1_4:43938574-43938593 Msa0164460:CDS 10.0%
!!! CACAATTTATATTTTAAATT+TGG - chr1_4:43939518-43939537 Msa0164460:intron 10.0%
!! TAATTGATCATAATATTAAA+AGG - chr1_4:43943821-43943840 Msa0164460:intron 10.0%
!! ATTATACTCAAAAATAGAAA+AGG + chr1_4:43935905-43935924 None:intergenic 15.0%
!!! TATTGATAACTAATATTTGT+TGG + chr1_4:43936291-43936310 None:intergenic 15.0%
!! ATTTAAGAACTCTAAATTAA+AGG - chr1_4:43936826-43936845 Msa0164460:intron 15.0%
!!! ATGAAATAAAGCTTTTTTTA+AGG - chr1_4:43937304-43937323 Msa0164460:CDS 15.0%
!! AGTACAATAAATTATAACAA+AGG - chr1_4:43937364-43937383 Msa0164460:CDS 15.0%
!!! ACACTTTTTTTTTAGAAAAT+GGG + chr1_4:43937798-43937817 None:intergenic 15.0%
!! TTATGAGAAAAATATACTAT+TGG - chr1_4:43938098-43938117 Msa0164460:CDS 15.0%
!! TATGAGAAAAATATACTATT+GGG - chr1_4:43938099-43938118 Msa0164460:CDS 15.0%
!! CTAATTTAATATTATGCAAT+AGG + chr1_4:43938241-43938260 None:intergenic 15.0%
!!! AAACTTTGTTTTTTTTTTGT+TGG + chr1_4:43938276-43938295 None:intergenic 15.0%
!! TATTTAAATTAAATTTGGGT+TGG - chr1_4:43938387-43938406 Msa0164460:CDS 15.0%
!!! TTTTCTATTTTAACTTGTTT+GGG + chr1_4:43939345-43939364 None:intergenic 15.0%
!!! TTTTTCTATTTTAACTTGTT+TGG + chr1_4:43939346-43939365 None:intergenic 15.0%
!! AAATAGAAAAACAACAAAAA+AGG - chr1_4:43939355-43939374 Msa0164460:intron 15.0%
!!! TGTAACATTAAAGTTTTTTT+AGG - chr1_4:43939654-43939673 Msa0164460:intron 15.0%
!!! AAATATAATTTTAACTACTG+TGG + chr1_4:43940148-43940167 None:intergenic 15.0%
!! GAAAAAATTAATGAATGATA+AGG - chr1_4:43941331-43941350 Msa0164460:intron 15.0%
!!! TTTTTGAATGTTTATGTATA+TGG + chr1_4:43943124-43943143 None:intergenic 15.0%
!!! TTATAACTTTGTTTTTTTGA+GGG - chr1_4:43944175-43944194 Msa0164460:intron 15.0%
!! AAGTAGTATAAAGAAATTGA+AGG + chr1_4:43934811-43934830 None:intergenic 20.0%
!! TTAGAGTTACTATATTGTAT+TGG - chr1_4:43935622-43935641 Msa0164460:intron 20.0%
!! TAGAGTTACTATATTGTATT+GGG - chr1_4:43935623-43935642 Msa0164460:intron 20.0%
!! CATTTCTTCTTCATTATTAT+TGG + chr1_4:43935842-43935861 None:intergenic 20.0%
!! CAATAATAATGAAGAAGAAA+TGG - chr1_4:43935840-43935859 Msa0164460:intron 20.0%
!! ATTAACCATGTCAATAATAA+TGG + chr1_4:43936240-43936259 None:intergenic 20.0%
!! ATGTCAAAATATTATTACTC+TGG + chr1_4:43936393-43936412 None:intergenic 20.0%
!! AATAAAAAATTGTGTAATGG+AGG + chr1_4:43936664-43936683 None:intergenic 20.0%
!! TCTCTAACAAAATGTTTAAA+TGG + chr1_4:43936724-43936743 None:intergenic 20.0%
!!! TTTTGTTAGAGAGTTTTTAT+TGG - chr1_4:43936732-43936751 Msa0164460:intron 20.0%
!!! GGAAATGTTATTTTAACATA+GGG + chr1_4:43937047-43937066 None:intergenic 20.0%
!!! TGGAAATGTTATTTTAACAT+AGG + chr1_4:43937048-43937067 None:intergenic 20.0%
!!! AAGAATCAAATTAGTTTGAA+TGG + chr1_4:43937068-43937087 None:intergenic 20.0%
!!! GACACTTTTTTTTTAGAAAA+TGG + chr1_4:43937799-43937818 None:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG + chr1_4:43937835-43937854 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + chr1_4:43937836-43937855 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG + chr1_4:43937909-43937928 None:intergenic 20.0%
!!! AAGAAAAGTGTATAAATGAA+GGG + chr1_4:43937933-43937952 None:intergenic 20.0%
!!! TAAGAAAAGTGTATAAATGA+AGG + chr1_4:43937934-43937953 None:intergenic 20.0%
!!! TTTATTCCATTTTTGACAAA+AGG + chr1_4:43938436-43938455 None:intergenic 20.0%
!!! TTTAATCTAAACTCTAAAGT+TGG - chr1_4:43938616-43938635 Msa0164460:CDS 20.0%
!! TAGATTTACAATGTAATCAT+AGG + chr1_4:43938691-43938710 None:intergenic 20.0%
!! GATTACATTGTAAATCTATT+TGG - chr1_4:43938693-43938712 Msa0164460:CDS 20.0%
!!! AATTTTTTTGCAAAGATAAG+GGG + chr1_4:43938808-43938827 None:intergenic 20.0%
!!! CAATTTTTTTGCAAAGATAA+GGG + chr1_4:43938809-43938828 None:intergenic 20.0%
!!! AAAATTGCATTGTTTTTGTT+AGG - chr1_4:43938893-43938912 Msa0164460:CDS 20.0%
!!! AAATTGCATTGTTTTTGTTA+GGG - chr1_4:43938894-43938913 Msa0164460:CDS 20.0%
!!! TATTTTTTATGTGGTAAAAG+AGG + chr1_4:43939038-43939057 None:intergenic 20.0%
!!! TCTTTTACCACATAAAAAAT+AGG - chr1_4:43939037-43939056 Msa0164460:CDS 20.0%
!!! TTTCTATTTTAACTTGTTTG+GGG + chr1_4:43939344-43939363 None:intergenic 20.0%
!!! TTTTATAGTTCTTGAAATCA+TGG + chr1_4:43940383-43940402 None:intergenic 20.0%
!! TGATTTCAAGAACTATAAAA+AGG - chr1_4:43940383-43940402 Msa0164460:intron 20.0%
!! AATCTTACTTAGTATATTCT+TGG - chr1_4:43940662-43940681 Msa0164460:intron 20.0%
!! TATATTTCAGAATACTTCTT+CGG - chr1_4:43941559-43941578 Msa0164460:intron 20.0%
!!! GATAAAATCATTGATAGTAA+TGG - chr1_4:43941821-43941840 Msa0164460:intron 20.0%
!! TCGTATGTTATTAATTGATA+TGG - chr1_4:43942285-43942304 Msa0164460:intron 20.0%
!! TTATTAATTGATATGGTTTC+AGG - chr1_4:43942292-43942311 Msa0164460:intron 20.0%
!! CAAAACATAATATAACTAGA+AGG + chr1_4:43942606-43942625 None:intergenic 20.0%
!!! TTCTGTTATTTTGTCTATTA+AGG - chr1_4:43942728-43942747 Msa0164460:intron 20.0%
!!! TTGCTACATGTTATTTTATT+TGG - chr1_4:43942843-43942862 Msa0164460:intron 20.0%
!! ATTAGGGATTAATATAACAT+AGG + chr1_4:43942981-43943000 None:intergenic 20.0%
!! GTTAACTTAAACATCAATTA+GGG + chr1_4:43942997-43943016 None:intergenic 20.0%
!! AGTTAACTTAAACATCAATT+AGG + chr1_4:43942998-43943017 None:intergenic 20.0%
!!! AAACTTTCTTCATTATTTTC+AGG - chr1_4:43943282-43943301 Msa0164460:intron 20.0%
!! AAGAAGATAAAATGAATTGT+AGG - chr1_4:43943794-43943813 Msa0164460:intron 20.0%
!!! TTCTAACTCAGTTATTTTAT+TGG + chr1_4:43943876-43943895 None:intergenic 20.0%
!! AAAACTTAAAACTGTTAAAG+AGG - chr1_4:43943936-43943955 Msa0164460:intron 20.0%
!!! CTTATAACTTTGTTTTTTTG+AGG - chr1_4:43944174-43944193 Msa0164460:intron 20.0%
!!! TATAACTTTGTTTTTTTGAG+GGG - chr1_4:43944176-43944195 Msa0164460:intron 20.0%
!!! ATCAATTTTCCTTAAATACT+AGG - chr1_4:43944224-43944243 Msa0164460:intron 20.0%
! TAGTATAAAGAAATTGAAGG+TGG + chr1_4:43934808-43934827 None:intergenic 25.0%
! GAAAAGGTTGTTAAATTGAA+AGG + chr1_4:43934910-43934929 None:intergenic 25.0%
! TTATCTTAAGGATTTCGAAT+TGG - chr1_4:43935065-43935084 Msa0164460:CDS 25.0%
! GAGATTAAAGAAGAAAATCT+TGG + chr1_4:43935242-43935261 None:intergenic 25.0%
!! TGATACAACTAATTCACTTT+TGG - chr1_4:43935357-43935376 Msa0164460:intron 25.0%
!! TTGAAATGACTCAGTTATTT+TGG - chr1_4:43935669-43935688 Msa0164460:intron 25.0%
!!! TGAAATGACTCAGTTATTTT+GGG - chr1_4:43935670-43935689 Msa0164460:intron 25.0%
! TGAGATAATAATATGGAGAA+TGG + chr1_4:43936182-43936201 None:intergenic 25.0%
! TGGTTAATCATAAAATGAAC+TGG - chr1_4:43936252-43936271 Msa0164460:CDS 25.0%
! TGATACTTTGCACTAATAAA+TGG - chr1_4:43936319-43936338 Msa0164460:CDS 25.0%
! CAAAATATTATTACTCTGGT+TGG + chr1_4:43936389-43936408 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG + chr1_4:43936442-43936461 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - chr1_4:43936441-43936460 Msa0164460:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - chr1_4:43936454-43936473 Msa0164460:intron 25.0%
! TATCATTTCTCAACCAATTA+AGG - chr1_4:43936566-43936585 Msa0164460:intron 25.0%
!! AATAGATATATGGCCTTAAT+TGG + chr1_4:43936582-43936601 None:intergenic 25.0%
! ATTAAGGCCATATATCTATT+AGG - chr1_4:43936582-43936601 Msa0164460:intron 25.0%
!! TAGAGTACCTAATAGATATA+TGG + chr1_4:43936592-43936611 None:intergenic 25.0%
! ATATCTATTAGGTACTCTAT+TGG - chr1_4:43936593-43936612 Msa0164460:intron 25.0%
! TATCTATTAGGTACTCTATT+GGG - chr1_4:43936594-43936613 Msa0164460:intron 25.0%
!! CTCTATTGGGAAAAATTTTT+CGG - chr1_4:43936607-43936626 Msa0164460:intron 25.0%
!! ATTTTGTTGGAAGTTATTGA+TGG - chr1_4:43936696-43936715 Msa0164460:intron 25.0%
!!! AAGCTTTATTTCATATGAAG+TGG + chr1_4:43937298-43937317 None:intergenic 25.0%
! ATTGAATGAAAAGAGAAATG+AGG - chr1_4:43937399-43937418 Msa0164460:CDS 25.0%
! TTGAATGAAAAGAGAAATGA+GGG - chr1_4:43937400-43937419 Msa0164460:CDS 25.0%
! AAATAGAGAAGAGAGAATAA+AGG + chr1_4:43937589-43937608 None:intergenic 25.0%
!!! TTTTCAAAAAGTGGTTGATA+AGG + chr1_4:43937748-43937767 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + chr1_4:43937910-43937929 None:intergenic 25.0%
!! AGAAAAGTGTATAAATGAAG+GGG + chr1_4:43937932-43937951 None:intergenic 25.0%
!!! TTGCAAACAAAATGTTTTTG+GGG + chr1_4:43938363-43938382 None:intergenic 25.0%
!! CTTGCAAACAAAATGTTTTT+GGG + chr1_4:43938364-43938383 None:intergenic 25.0%
!! ACTTGCAAACAAAATGTTTT+TGG + chr1_4:43938365-43938384 None:intergenic 25.0%
!!! TAAATTAAATTTGGGTTGGA+CGG - chr1_4:43938391-43938410 Msa0164460:CDS 25.0%
! GGAATAAAATAAAAAACGTG+AGG - chr1_4:43938448-43938467 Msa0164460:CDS 25.0%
! ATAGTATTAACATTATTGGG+AGG - chr1_4:43938577-43938596 Msa0164460:CDS 25.0%
!!! GCAATTTTTTTGCAAAGATA+AGG + chr1_4:43938810-43938829 None:intergenic 25.0%
! TTATGAATAATAACTTGGCA+TGG + chr1_4:43939015-43939034 None:intergenic 25.0%
! AGAGGTTATGAATAATAACT+TGG + chr1_4:43939020-43939039 None:intergenic 25.0%
!! TGATATTTGCTGAAATTGAT+TGG + chr1_4:43939077-43939096 None:intergenic 25.0%
!!! TTCTATTTTAACTTGTTTGG+GGG + chr1_4:43939343-43939362 None:intergenic 25.0%
!!! TCTTTGGAGTTAAAGATTTA+CGG - chr1_4:43939567-43939586 Msa0164460:intron 25.0%
!! TTATCTTGATAACCAATATC+AGG - chr1_4:43939959-43939978 Msa0164460:intron 25.0%
!! TATCTTGATAACCAATATCA+GGG - chr1_4:43939960-43939979 Msa0164460:intron 25.0%
!! ATTTTCCAATTAGCAGTTAT+TGG - chr1_4:43940075-43940094 Msa0164460:intron 25.0%
!! TTCTATCGATTGATTTATAG+AGG - chr1_4:43940167-43940186 Msa0164460:intron 25.0%
! TTCAAGAACTATAAAAAGGT+TGG - chr1_4:43940387-43940406 Msa0164460:intron 25.0%
!! AAAACTTTTAGATGGTTTCT+CGG + chr1_4:43940517-43940536 None:intergenic 25.0%
!! AACATCAGAAAACTTTTAGA+TGG + chr1_4:43940525-43940544 None:intergenic 25.0%
!! AAAGTTTTCTGATGTTTGTT+TGG - chr1_4:43940529-43940548 Msa0164460:intron 25.0%
!! AAGTTTTCTGATGTTTGTTT+GGG - chr1_4:43940530-43940549 Msa0164460:intron 25.0%
! AACTATTATAGTTACAGCAA+TGG + chr1_4:43941255-43941274 None:intergenic 25.0%
!! AAATTTTATCAACCACCATA+TGG + chr1_4:43941442-43941461 None:intergenic 25.0%
!!! ATATGGTGGTTGATAAAATT+TGG - chr1_4:43941441-43941460 Msa0164460:intron 25.0%
! AATCTCTGATTTCAACTTAT+CGG + chr1_4:43941507-43941526 None:intergenic 25.0%
! ATTGTGAATGACATTATAGA+TGG - chr1_4:43941878-43941897 Msa0164460:intron 25.0%
!!! TAGTAATTATTGGTTTACCA+TGG - chr1_4:43942482-43942501 Msa0164460:intron 25.0%
!! GGTTAATTGAATCTTGTTTA+AGG - chr1_4:43942554-43942573 Msa0164460:intron 25.0%
! AAACATTTACAAGGTACAAA+AGG + chr1_4:43942815-43942834 None:intergenic 25.0%
! AGAAAAATGCTTGATTCTTA+GGG + chr1_4:43942882-43942901 None:intergenic 25.0%
! AAGAAAAATGCTTGATTCTT+AGG + chr1_4:43942883-43942902 None:intergenic 25.0%
! AAATGCTGATGTCATTATAA+TGG - chr1_4:43943053-43943072 Msa0164460:intron 25.0%
! ATCTTCTTTGTCTGTTATAT+AGG + chr1_4:43943763-43943782 None:intergenic 25.0%
! TATAAAAATGCCAGAATAGT+TGG + chr1_4:43943968-43943987 None:intergenic 25.0%
! ACAAAGTAAGCTTAAGAAAT+TGG + chr1_4:43944290-43944309 None:intergenic 25.0%
! GAAAAGATAAACATATTCAG+AGG - chr1_4:43944364-43944383 Msa0164460:CDS 25.0%
!! CAAAAACATGGATGAAATTT+TGG - chr1_4:43944668-43944687 Msa0164460:five_prime_UTR 25.0%
! TTATCCTACCAAAAATACTT+TGG + chr1_4:43944771-43944790 None:intergenic 25.0%
!!! AAGTATTTTTGGTAGGATAA+AGG - chr1_4:43944771-43944790 Msa0164460:five_prime_UTR 25.0%
! ATTTTCCAATCAGCAGTTAT+TGG - chr1_4:43934669-43934688 Msa0164460:three_prime_UTR 30.0%
! TTTTTCCAATAACTGCTGAT+TGG + chr1_4:43934677-43934696 None:intergenic 30.0%
! ATCGAATCGATTCAAAAGAT+AGG + chr1_4:43934742-43934761 None:intergenic 30.0%
! TCGATTGATTTATAGAGAAG+TGG - chr1_4:43934757-43934776 Msa0164460:three_prime_UTR 30.0%
TATAAAGAAATTGAAGGTGG+AGG + chr1_4:43934805-43934824 None:intergenic 30.0%
TTCCATAAGCTAATTCAAAC+TGG - chr1_4:43934833-43934852 Msa0164460:CDS 30.0%
TATTGGTATACCTGAATTCA+AGG - chr1_4:43934881-43934900 Msa0164460:CDS 30.0%
GAAAAACAGATTGAAATCGA+TGG - chr1_4:43935038-43935057 Msa0164460:CDS 30.0%
AGAAAAGCAGAAGAAAATTC+AGG - chr1_4:43935206-43935225 Msa0164460:intron 30.0%
!! CTAATTCACTTTTGGTTGAA+CGG - chr1_4:43935365-43935384 Msa0164460:intron 30.0%
AGTAAATGAGTCTGATATTC+CGG - chr1_4:43935705-43935724 Msa0164460:intron 30.0%
ATTATATGACCATCCAAACA+TGG + chr1_4:43935869-43935888 None:intergenic 30.0%
CTTGTGGTGAGATAATAATA+TGG + chr1_4:43936189-43936208 None:intergenic 30.0%
!!! CACAAGACTTTTTAATTTGC+CGG - chr1_4:43936203-43936222 Msa0164460:intron 30.0%
!!! ACAAGACTTTTTAATTTGCC+GGG - chr1_4:43936204-43936223 Msa0164460:intron 30.0%
! AATAATGGAGGAAATATACC+CGG + chr1_4:43936225-43936244 None:intergenic 30.0%
TTCCTCCATTATTATTGACA+TGG - chr1_4:43936232-43936251 Msa0164460:intron 30.0%
AACCATGTCAATAATAATGG+AGG + chr1_4:43936237-43936256 None:intergenic 30.0%
TAATCATAAAATGAACTGGC+TGG - chr1_4:43936256-43936275 Msa0164460:CDS 30.0%
TCAACAAAGTTGTCATCAAA+TGG + chr1_4:43936416-43936435 None:intergenic 30.0%
!!! AACCACTTTTTGACAACTTT+TGG + chr1_4:43936539-43936558 None:intergenic 30.0%
! TTCCATTGTGAATGCTTTTA+TGG - chr1_4:43936850-43936869 Msa0164460:intron 30.0%
GAGAAATAGAGTAGATTTGA+TGG - chr1_4:43936945-43936964 Msa0164460:intron 30.0%
!! AGTAGATTTGATGGATTGTT+TGG - chr1_4:43936954-43936973 Msa0164460:intron 30.0%
TGAATGAAAAGAGAAATGAG+GGG - chr1_4:43937401-43937420 Msa0164460:CDS 30.0%
! TTCTATTTCTCGTCAGTTAT+GGG - chr1_4:43937459-43937478 Msa0164460:CDS 30.0%
!! TTTGGTAGTGAAGAGAAATA+GGG + chr1_4:43937529-43937548 None:intergenic 30.0%
AAATACACTAACACTGTGTT+TGG + chr1_4:43937620-43937639 None:intergenic 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG + chr1_4:43937821-43937840 None:intergenic 30.0%
! TTGAAATGGGTCAGTTATTT+TGG + chr1_4:43937822-43937841 None:intergenic 30.0%
TCTATGTGAAAAACCAAAGT+AGG - chr1_4:43937955-43937974 Msa0164460:CDS 30.0%
CAAAGTAGGTCAATTATACT+GGG - chr1_4:43937969-43937988 Msa0164460:CDS 30.0%
CATCGAATCAAATTAAAAGG+AGG - chr1_4:43938052-43938071 Msa0164460:CDS 30.0%
TGTACTCCATAATTGTCAAA+CGG - chr1_4:43938183-43938202 Msa0164460:CDS 30.0%
GCGAAAATCAAAATTACACA+TGG + chr1_4:43938486-43938505 None:intergenic 30.0%
TATTAACATTATTGGGAGGA+GGG - chr1_4:43938581-43938600 Msa0164460:CDS 30.0%
GTCAAAAAGATGACTAATGT+TGG + chr1_4:43939316-43939335 None:intergenic 30.0%
!!! TCTATTTTAACTTGTTTGGG+GGG + chr1_4:43939342-43939361 None:intergenic 30.0%
!!! ACTCCATTTTTTAGAGAAAG+AGG + chr1_4:43939594-43939613 None:intergenic 30.0%
!! TAGCATTGATAAAAGATTGC+AGG - chr1_4:43939688-43939707 Msa0164460:intron 30.0%
AATAATCTGCTTCCACTTTA+AGG + chr1_4:43939837-43939856 None:intergenic 30.0%
! CTTTTCCAATAACTGCTAAT+TGG + chr1_4:43940083-43940102 None:intergenic 30.0%
AAGTATAAAGACATTGAGCT+GGG + chr1_4:43940222-43940241 None:intergenic 30.0%
AAAGTATAAAGACATTGAGC+TGG + chr1_4:43940223-43940242 None:intergenic 30.0%
! TTTCTTTGTTATGCAGCTAT+TGG - chr1_4:43940273-43940292 Msa0164460:intron 30.0%
! TTTTCTGATACCTTGAATTC+AGG + chr1_4:43940303-43940322 None:intergenic 30.0%
ATAGTAGGCAAGAGATTTAT+GGG - chr1_4:43940478-43940497 Msa0164460:intron 30.0%
CTTAACACTGATCATTCTAA+TGG - chr1_4:43940566-43940585 Msa0164460:intron 30.0%
AGATTTCTATTCATGTTACC+AGG - chr1_4:43940757-43940776 Msa0164460:intron 30.0%
GATTTCTATTCATGTTACCA+GGG - chr1_4:43940758-43940777 Msa0164460:intron 30.0%
GAAGGTTTCAATTTATGACT+TGG - chr1_4:43940794-43940813 Msa0164460:intron 30.0%
!! TCAATTTATGACTTGGTAGT+TGG - chr1_4:43940801-43940820 Msa0164460:intron 30.0%
GATATAGTTCATTTGTCAAC+TGG - chr1_4:43940825-43940844 Msa0164460:intron 30.0%
ATTGATGAATCAAGTTTGTC+AGG - chr1_4:43940897-43940916 Msa0164460:intron 30.0%
AAGATGATAGTTACAACTGT+TGG - chr1_4:43940996-43941015 Msa0164460:intron 30.0%
GCTACAGTAATTGGTAAAAT+CGG - chr1_4:43941107-43941126 Msa0164460:intron 30.0%
GTGATTGAAAAAGCAGTTAA+TGG - chr1_4:43941176-43941195 Msa0164460:intron 30.0%
GAAGTAGTTAAAGACAAAGA+AGG - chr1_4:43941581-43941600 Msa0164460:intron 30.0%
GAATCAGCAATATTGGAATT+TGG - chr1_4:43941632-43941651 Msa0164460:intron 30.0%
ATCAAAGTATATCCATTCTC+CGG + chr1_4:43941980-43941999 None:intergenic 30.0%
! ATATACTTTGATAGCCATTG+TGG - chr1_4:43941988-43942007 Msa0164460:intron 30.0%
! TATACTTTGATAGCCATTGT+GGG - chr1_4:43941989-43942008 Msa0164460:intron 30.0%
CGATAACATAAATACAGCTA+AGG - chr1_4:43942096-43942115 Msa0164460:intron 30.0%
! ATTGATATGGTTTCAGGTAA+TGG - chr1_4:43942298-43942317 Msa0164460:intron 30.0%
TAATTACTAGAGACAAACCT+CGG + chr1_4:43942471-43942490 None:intergenic 30.0%
GGTTTGTCTCTAGTAATTAT+TGG - chr1_4:43942472-43942491 Msa0164460:intron 30.0%
AACATGTGGAAACATTTACA+AGG + chr1_4:43942824-43942843 None:intergenic 30.0%
AATAACATGTAGCAAACATG+TGG + chr1_4:43942838-43942857 None:intergenic 30.0%
! TCCTAAAAAGTTATGGCTTT+TGG - chr1_4:43942910-43942929 Msa0164460:intron 30.0%
! CCTAAAAAGTTATGGCTTTT+GGG - chr1_4:43942911-43942930 Msa0164460:intron 30.0%
AGGGATTAATATAACATAGG+TGG + chr1_4:43942978-43942997 None:intergenic 30.0%
! CCTGAAAAAGGTGTAATTTA+AGG + chr1_4:43943023-43943042 None:intergenic 30.0%
! CCTTAAATTACACCTTTTTC+AGG - chr1_4:43943020-43943039 Msa0164460:intron 30.0%
! AATGACATCAGCATTTTCTT+TGG + chr1_4:43943049-43943068 None:intergenic 30.0%
TATTGTCAAAGTGGCAAAAT+GGG - chr1_4:43943092-43943111 Msa0164460:intron 30.0%
CATAGTATTCAACATTTCAG+TGG + chr1_4:43943244-43943263 None:intergenic 30.0%
!! GTTTTATTACCAAACCAATG+TGG - chr1_4:43943436-43943455 Msa0164460:intron 30.0%
!!! CTTGGAGTTCTAAATTTTGA+GGG - chr1_4:43943498-43943517 Msa0164460:intron 30.0%
!!! TTGGAGTTCTAAATTTTGAG+GGG - chr1_4:43943499-43943518 Msa0164460:intron 30.0%
! ACACATTTTAAATACCGAAC+CGG - chr1_4:43943650-43943669 Msa0164460:intron 30.0%
TTGTCTGTTATATAGGCATT+AGG + chr1_4:43943756-43943775 None:intergenic 30.0%
CGTTAACACGTAATAACAAA+TGG + chr1_4:43944026-43944045 None:intergenic 30.0%
!! ACAATGTTACTGTAGTTTTG+TGG - chr1_4:43944085-43944104 Msa0164460:intron 30.0%
AGATACAAGAGTAGAATACT+AGG + chr1_4:43944120-43944139 None:intergenic 30.0%
GTATTCTACTCTTGTATCTA+TGG - chr1_4:43944121-43944140 Msa0164460:intron 30.0%
GGAAAATTGATAGATCATAG+AGG + chr1_4:43944215-43944234 None:intergenic 30.0%
! TTTTCCTTTTGTCTTTTACC+AGG - chr1_4:43944312-43944331 Msa0164460:CDS 30.0%
!! TGGTTACTCAGTTTGTTATT+TGG - chr1_4:43944502-43944521 Msa0164460:intron 30.0%
! TTTTCTGTTGTGCAAAAACA+TGG - chr1_4:43944656-43944675 Msa0164460:intron 30.0%
!!! ATGGATGAAATTTTGGTTCT+TGG - chr1_4:43944675-43944694 Msa0164460:five_prime_UTR 30.0%
AAACTATCTCACAGAAAAAG+TGG - chr1_4:43944721-43944740 Msa0164460:five_prime_UTR 30.0%
AAAATACTTTGGTGAGAAGT+TGG + chr1_4:43944760-43944779 None:intergenic 30.0%
!! ACTTCTCACCAAAGTATTTT+TGG - chr1_4:43944760-43944779 Msa0164460:five_prime_UTR 30.0%
TCAATCTGTAGTTGCAAAAA+TGG + chr1_4:43944942-43944961 None:intergenic 30.0%
TTCTTCTGATAACCAACATC+AGG - chr1_4:43934545-43934564 Msa0164460:three_prime_UTR 35.0%
TCTTCTGATAACCAACATCA+GGG - chr1_4:43934546-43934565 Msa0164460:three_prime_UTR 35.0%
! GACCAGTTTGAATTAGCTTA+TGG + chr1_4:43934838-43934857 None:intergenic 35.0%
TAAGCTAATTCAAACTGGTC+TGG - chr1_4:43934838-43934857 Msa0164460:CDS 35.0%
! TCGTTTTCTTATGCAGCTAT+TGG - chr1_4:43934864-43934883 Msa0164460:CDS 35.0%
TGAAAGGATACCTTGAATTC+AGG + chr1_4:43934894-43934913 None:intergenic 35.0%
!!! AACCTAGCTTTGGTTTTGTA+TGG - chr1_4:43934992-43935011 Msa0164460:CDS 35.0%
AACCATACAAAACCAAAGCT+AGG + chr1_4:43934997-43935016 None:intergenic 35.0%
AACAGATTGAAATCGATGGA+AGG - chr1_4:43935042-43935061 Msa0164460:CDS 35.0%
ATCGATGGAAGGTTATCTTA+AGG - chr1_4:43935053-43935072 Msa0164460:CDS 35.0%
AGGATTCTTGACCAAAGTAA+CGG + chr1_4:43935136-43935155 None:intergenic 35.0%
AAATTATGTGTGCAGACACA+TGG - chr1_4:43935456-43935475 Msa0164460:intron 35.0%
AATTATGTGTGCAGACACAT+GGG - chr1_4:43935457-43935476 Msa0164460:intron 35.0%
GTAAATGAGTCTGATATTCC+GGG - chr1_4:43935706-43935725 Msa0164460:intron 35.0%
! GTTGTATAACTTGTGTCTCA+TGG - chr1_4:43936149-43936168 Msa0164460:intron 35.0%
CGGCAAATTAAAAAGTCTTG+TGG + chr1_4:43936205-43936224 None:intergenic 35.0%
AGAGAGAAAAAAGAAGAGAG+AGG - chr1_4:43936477-43936496 Msa0164460:intron 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG - chr1_4:43936534-43936553 Msa0164460:intron 35.0%
!! CACCATAAAAGCATTCACAA+TGG + chr1_4:43936855-43936874 None:intergenic 35.0%
! GAATGCTTTTATGGTGTGTT+TGG - chr1_4:43936859-43936878 Msa0164460:intron 35.0%
! AGAGAAATGAGGGGTATAAT+AGG - chr1_4:43937410-43937429 Msa0164460:CDS 35.0%
CATAACTGACGAGAAATAGA+AGG + chr1_4:43937460-43937479 None:intergenic 35.0%
! CTTCTATTTCTCGTCAGTTA+TGG - chr1_4:43937458-43937477 Msa0164460:CDS 35.0%
! TCTATTTCTCGTCAGTTATG+GGG - chr1_4:43937460-43937479 Msa0164460:CDS 35.0%
!! TTGGTAGTGAAGAGAAATAG+GGG + chr1_4:43937528-43937547 None:intergenic 35.0%
!! GTTTGGTAGTGAAGAGAAAT+AGG + chr1_4:43937530-43937549 None:intergenic 35.0%
GCAAAAAGTGACAAGTCTAT+CGG + chr1_4:43937719-43937738 None:intergenic 35.0%
!!! AGACTTGTCACTTTTTGCAT+TGG - chr1_4:43937721-43937740 Msa0164460:CDS 35.0%
!!! AGGGAGTACTTTTCAAAAAG+TGG + chr1_4:43937757-43937776 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG + chr1_4:43937785-43937804 None:intergenic 35.0%
TGTATAAATGAAGGGGAAAG+TGG + chr1_4:43937925-43937944 None:intergenic 35.0%
CCAGTATAATTGACCTACTT+TGG + chr1_4:43937971-43937990 None:intergenic 35.0%
CCAAAGTAGGTCAATTATAC+TGG - chr1_4:43937968-43937987 Msa0164460:CDS 35.0%
TCAACCATGTTCACTATTGA+CGG - chr1_4:43938029-43938048 Msa0164460:CDS 35.0%
! CGGCATCGAATCAAATTAAA+AGG - chr1_4:43938049-43938068 Msa0164460:CDS 35.0%
GTACTCCATAATTGTCAAAC+GGG - chr1_4:43938184-43938203 Msa0164460:CDS 35.0%
TACTCCATAATTGTCAAACG+GGG - chr1_4:43938185-43938204 Msa0164460:CDS 35.0%
! TGAATCATAGCAGCATTGAA+GGG + chr1_4:43938337-43938356 None:intergenic 35.0%
! TTGAATCATAGCAGCATTGA+AGG + chr1_4:43938338-43938357 None:intergenic 35.0%
! TGATTTTCGCGTTTCTTTTG+TGG - chr1_4:43938496-43938515 Msa0164460:CDS 35.0%
GTATTAACATTATTGGGAGG+AGG - chr1_4:43938580-43938599 Msa0164460:CDS 35.0%
ATTAACATTATTGGGAGGAG+GGG - chr1_4:43938582-43938601 Msa0164460:CDS 35.0%
CTAAGCATGACAAAAATAGG+GGG + chr1_4:43938767-43938786 None:intergenic 35.0%
CCTAAGCATGACAAAAATAG+GGG + chr1_4:43938768-43938787 None:intergenic 35.0%
CCCTAAGCATGACAAAAATA+GGG + chr1_4:43938769-43938788 None:intergenic 35.0%
!!! CCCTATTTTTGTCATGCTTA+GGG - chr1_4:43938766-43938785 Msa0164460:CDS 35.0%
TCCCTAAGCATGACAAAAAT+AGG + chr1_4:43938770-43938789 None:intergenic 35.0%
! CTTAGGGAAATATGCTCTTT+TGG - chr1_4:43938782-43938801 Msa0164460:CDS 35.0%
TCAGCATAGTTGGGAAAATT+AGG - chr1_4:43938865-43938884 Msa0164460:CDS 35.0%
AGGGATCAAAATTGCTACAA+CGG - chr1_4:43938913-43938932 Msa0164460:CDS 35.0%
!! GATTGGCTTAAATGCATGTT+CGG + chr1_4:43938952-43938971 None:intergenic 35.0%
TGGCAGTATGCAAAATAGAT+TGG + chr1_4:43938969-43938988 None:intergenic 35.0%
ATACTGCCAAAAACGAAGTT+TGG - chr1_4:43938980-43938999 Msa0164460:CDS 35.0%
!!! TGCAGGTCCTATTTTTTATG+TGG + chr1_4:43939047-43939066 None:intergenic 35.0%
ACATAAAAAATAGGACCTGC+AGG - chr1_4:43939046-43939065 Msa0164460:CDS 35.0%
CCAAAGAAGCAATTAGCAAA+TGG + chr1_4:43939554-43939573 None:intergenic 35.0%
! CCATTTGCTAATTGCTTCTT+TGG - chr1_4:43939551-43939570 Msa0164460:intron 35.0%
! GGTCCTCTTTCTCTAAAAAA+TGG - chr1_4:43939588-43939607 Msa0164460:intron 35.0%
CATTGTCAGAATCCTTAAAG+TGG - chr1_4:43939822-43939841 Msa0164460:intron 35.0%
! TCGATTGATTTATAGAGGAG+TGG - chr1_4:43940172-43940191 Msa0164460:intron 35.0%
AGTATAAAGACATTGAGCTG+GGG + chr1_4:43940221-43940240 None:intergenic 35.0%
TTCCATAAGCTAATTCAGAC+TGG - chr1_4:43940244-43940263 Msa0164460:intron 35.0%
TATTGGTACACCTGAATTCA+AGG - chr1_4:43940290-43940309 Msa0164460:intron 35.0%
ACAACTGATGCAATATCATC+CGG + chr1_4:43940354-43940373 None:intergenic 35.0%
!! AAAAAGGTTGGTGAAGTTCA+AGG - chr1_4:43940399-43940418 Msa0164460:intron 35.0%
!! AAAAGGTTGGTGAAGTTCAA+GGG - chr1_4:43940400-43940419 Msa0164460:intron 35.0%
GTCAAGACAGTATACATAGT+AGG - chr1_4:43940463-43940482 Msa0164460:intron 35.0%
CATAGTAGGCAAGAGATTTA+TGG - chr1_4:43940477-43940496 Msa0164460:intron 35.0%
TAGATGGTTTCTCGGTATAA+CGG + chr1_4:43940509-43940528 None:intergenic 35.0%
! GTTTGTGCTTTAGTTTCCAT+AGG - chr1_4:43940588-43940607 Msa0164460:intron 35.0%
! CTTTAGTTTCCATAGGCATA+GGG - chr1_4:43940595-43940614 Msa0164460:intron 35.0%
! ACACCATCATAAACACCTTT+TGG + chr1_4:43940639-43940658 None:intergenic 35.0%
!! AAAGGTGTTTATGATGGTGT+TGG - chr1_4:43940639-43940658 Msa0164460:intron 35.0%
ATCTCTGCAGTTCTTAGATT+TGG - chr1_4:43940719-43940738 Msa0164460:intron 35.0%
TGAATGAAAATTCCATCAGC+TGG + chr1_4:43940861-43940880 None:intergenic 35.0%
! GCTGATGGAATTTTCATTCA+TGG - chr1_4:43940861-43940880 Msa0164460:intron 35.0%
CTTCGATTGTCTATATCTAC+AGG + chr1_4:43940933-43940952 None:intergenic 35.0%
! TCGAAGACCTTTTCTTCTTT+CGG - chr1_4:43940947-43940966 Msa0164460:intron 35.0%
AATGGAGTTGCTACAGTAAT+TGG - chr1_4:43941098-43941117 Msa0164460:intron 35.0%
AGACTAAGTGTTACAGCTAA+CGG + chr1_4:43941299-43941318 None:intergenic 35.0%
TTTATCAACCACCATATGGT+TGG + chr1_4:43941438-43941457 None:intergenic 35.0%
TTGGATATGTGAAAAGACTG+TGG - chr1_4:43941460-43941479 Msa0164460:intron 35.0%
! TCTGAAATATAGCCTGCAAA+AGG + chr1_4:43941550-43941569 None:intergenic 35.0%
AGAAGGAAAACAGACAATAC+TGG - chr1_4:43941598-43941617 Msa0164460:intron 35.0%
GAAGGAAAACAGACAATACT+GGG - chr1_4:43941599-43941618 Msa0164460:intron 35.0%
ACCAACAGAATCAGCAATAT+TGG - chr1_4:43941625-43941644 Msa0164460:intron 35.0%
!! TCCAATATTGCTGATTCTGT+TGG + chr1_4:43941629-43941648 None:intergenic 35.0%
AGCAATATTGGAATTTGGCT+TGG - chr1_4:43941637-43941656 Msa0164460:intron 35.0%
! TAGATCCTGTAAGGTACTTA+AGG - chr1_4:43941688-43941707 Msa0164460:intron 35.0%
TTCTTCCTGTCTGAATTGAA+AGG + chr1_4:43941719-43941738 None:intergenic 35.0%
ACAATCTTTGCTTTCTCTTC+AGG + chr1_4:43941863-43941882 None:intergenic 35.0%
AAGAGTTCTCAAAGCTTCAT+GGG + chr1_4:43941909-43941928 None:intergenic 35.0%
AAAGAGTTCTCAAAGCTTCA+TGG + chr1_4:43941910-43941929 None:intergenic 35.0%
!! AGCTTTGAGAACTCTTTGTT+TGG - chr1_4:43941913-43941932 Msa0164460:intron 35.0%
AAAGACATAGATGAAACCCA+AGG - chr1_4:43941941-43941960 Msa0164460:intron 35.0%
TCAAAGTATATCCATTCTCC+GGG + chr1_4:43941979-43941998 None:intergenic 35.0%
GTTCAAAAATGTTTAGCAGC+AGG - chr1_4:43942049-43942068 Msa0164460:intron 35.0%
AGCTGTATTTATGTTATCGC+CGG + chr1_4:43942095-43942114 None:intergenic 35.0%
AAGGCTATAGCTAAAGAATG+CGG - chr1_4:43942115-43942134 Msa0164460:intron 35.0%
GGATATCATACCTAGAATTC+AGG - chr1_4:43942207-43942226 Msa0164460:intron 35.0%
ACCAAACATATTCCTCAAAC+GGG + chr1_4:43942360-43942379 None:intergenic 35.0%
CACCAAACATATTCCTCAAA+CGG + chr1_4:43942361-43942380 None:intergenic 35.0%
! TTTGAGGAATATGTTTGGTG+AGG - chr1_4:43942361-43942380 Msa0164460:intron 35.0%
ATTAACACTACGATTCACCA+TGG + chr1_4:43942502-43942521 None:intergenic 35.0%
CTTGATTCTTAGGGAATAAC+TGG + chr1_4:43942873-43942892 None:intergenic 35.0%
GAACGTGTCCTAAAAAGTTA+TGG - chr1_4:43942903-43942922 Msa0164460:intron 35.0%
! CCCAAAAGCCATAACTTTTT+AGG + chr1_4:43942914-43942933 None:intergenic 35.0%
TTTCTTTGGCAACCTGAAAA+AGG + chr1_4:43943035-43943054 None:intergenic 35.0%
CTTCACTACTATTGTCAAAG+TGG - chr1_4:43943083-43943102 Msa0164460:intron 35.0%
CTATTGTCAAAGTGGCAAAA+TGG - chr1_4:43943091-43943110 Msa0164460:intron 35.0%
ATTGTCAAAGTGGCAAAATG+GGG - chr1_4:43943093-43943112 Msa0164460:intron 35.0%
TAACTGCTGTTCAATTGCTT+TGG - chr1_4:43943316-43943335 Msa0164460:intron 35.0%
AACTGCTGTTCAATTGCTTT+GGG - chr1_4:43943317-43943336 Msa0164460:intron 35.0%
! GCTTTGGGTTAACTTGATTA+TGG - chr1_4:43943332-43943351 Msa0164460:intron 35.0%
AACTTGATTATGGACACTCT+TGG - chr1_4:43943342-43943361 Msa0164460:intron 35.0%
CTTTCCATAAGTCCATCATT+AGG + chr1_4:43943393-43943412 None:intergenic 35.0%
! AAACTTGCTTTCTTTCCAAC+TGG + chr1_4:43943420-43943439 None:intergenic 35.0%
TTATTACCAAACCAATGTGG+AGG - chr1_4:43943439-43943458 Msa0164460:intron 35.0%
TTGTATCAACTGATTGTCCT+TGG - chr1_4:43943480-43943499 Msa0164460:intron 35.0%
! CCTCAAAATTTAGAACTCCA+AGG + chr1_4:43943500-43943519 None:intergenic 35.0%
!!! CCTTGGAGTTCTAAATTTTG+AGG - chr1_4:43943497-43943516 Msa0164460:intron 35.0%
!! TTCTAAATTTTGAGGGGAAG+AGG - chr1_4:43943505-43943524 Msa0164460:intron 35.0%
CATTACCTGGCAAAATACAA+AGG + chr1_4:43943589-43943608 None:intergenic 35.0%
AACACCTGGTAAAAGACAAA+AGG + chr1_4:43944319-43944338 None:intergenic 35.0%
TGTTTATCTCATTGAACACC+TGG + chr1_4:43944333-43944352 None:intergenic 35.0%
AGTAATCATAGTTGAGTTCC+TGG - chr1_4:43944441-43944460 Msa0164460:intron 35.0%
GTAATCATAGTTGAGTTCCT+GGG - chr1_4:43944442-43944461 Msa0164460:intron 35.0%
TTTCAACTGGTATGCATTTG+AGG + chr1_4:43944555-43944574 None:intergenic 35.0%
! AAAGCATCATGATGGTTATG+AGG - chr1_4:43944588-43944607 Msa0164460:five_prime_UTR 35.0%
GAACAAAATCACACTCTTTC+AGG + chr1_4:43944628-43944647 None:intergenic 35.0%
!!! CTCACCAAAGTATTTTTGGT+AGG - chr1_4:43944764-43944783 Msa0164460:five_prime_UTR 35.0%
ACCAACATCAGGGAAAGTTT+CGG - chr1_4:43934556-43934575 Msa0164460:three_prime_UTR 40.0%
ACCACAAGTCTTCTAGATCT+AGG - chr1_4:43934713-43934732 Msa0164460:three_prime_UTR 40.0%
TCCTAGATCTAGAAGACTTG+TGG + chr1_4:43934717-43934736 None:intergenic 40.0%
TCATCACACTAACCTAGCTT+TGG - chr1_4:43934982-43935001 Msa0164460:CDS 40.0%
GGATTTCGAATTGGAAGACA+AGG - chr1_4:43935074-43935093 Msa0164460:CDS 40.0%
AAAACCAAGCTCGGATATAC+CGG + chr1_4:43935536-43935555 None:intergenic 40.0%
TCTGTGTGAAAAACCAAGCT+CGG + chr1_4:43935545-43935564 None:intergenic 40.0%
TCTGATATTCCGGGATATTC+CGG - chr1_4:43935715-43935734 Msa0164460:intron 40.0%
GAAGAAATGGTGTCCATGTT+TGG - chr1_4:43935853-43935872 Msa0164460:intron 40.0%
AAATGGTGTCCATGTTTGGA+TGG - chr1_4:43935857-43935876 Msa0164460:intron 40.0%
!! TACTCTGGTTGGTTTGCTAT+TGG + chr1_4:43936378-43936397 None:intergenic 40.0%
!! TCGGAAGTTTTCTAAGAGTG+AGG - chr1_4:43936626-43936645 Msa0164460:intron 40.0%
!! CGGAAGTTTTCTAAGAGTGA+GGG - chr1_4:43936627-43936646 Msa0164460:intron 40.0%
GAAGTTGTGAAGAGAGAAGT+AGG - chr1_4:43936891-43936910 Msa0164460:intron 40.0%
CGAGAAATAGAAGGAGAGAT+GGG + chr1_4:43937451-43937470 None:intergenic 40.0%
ACGAGAAATAGAAGGAGAGA+TGG + chr1_4:43937452-43937471 None:intergenic 40.0%
! TGGGGAGAAAGAATTTTGTG+TGG - chr1_4:43937478-43937497 Msa0164460:CDS 40.0%
! GGGGAGAAAGAATTTTGTGT+GGG - chr1_4:43937479-43937498 Msa0164460:CDS 40.0%
GAGAGAGACTAAAAAGCCAT+GGG + chr1_4:43937506-43937525 None:intergenic 40.0%
GATGGTGAACTTCTCTTGTT+TGG + chr1_4:43937547-43937566 None:intergenic 40.0%
AGAGAGAAGTTGAAGAGAGA+TGG + chr1_4:43937565-43937584 None:intergenic 40.0%
ACACTAACACTGTGTTTGGT+AGG + chr1_4:43937616-43937635 None:intergenic 40.0%
ATTAGGTAAGTCATGACGAC+GGG + chr1_4:43937674-43937693 None:intergenic 40.0%
CATTAGGTAAGTCATGACGA+CGG + chr1_4:43937675-43937694 None:intergenic 40.0%
GACTAACAGGTTAGGACATT+AGG + chr1_4:43937691-43937710 None:intergenic 40.0%
! TCTATCGGTCTAAGACTAAC+AGG + chr1_4:43937704-43937723 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG + chr1_4:43937784-43937803 None:intergenic 40.0%
GTAGGTCAATTATACTGGGA+AGG - chr1_4:43937973-43937992 Msa0164460:CDS 40.0%
GTCAATTATACTGGGAAGGA+GGG - chr1_4:43937977-43937996 Msa0164460:CDS 40.0%
CTAACCCCGTTTGACAATTA+TGG + chr1_4:43938192-43938211 None:intergenic 40.0%
CATAATTGTCAAACGGGGTT+AGG - chr1_4:43938190-43938209 Msa0164460:CDS 40.0%
! CTGGAGCCTTTTGTCAAAAA+TGG - chr1_4:43938427-43938446 Msa0164460:CDS 40.0%
!!! CCCCTATTTTTGTCATGCTT+AGG - chr1_4:43938765-43938784 Msa0164460:CDS 40.0%
GCATAGTTGGGAAAATTAGG+AGG - chr1_4:43938868-43938887 Msa0164460:CDS 40.0%
TTGCTACAACGGCAAACATA+AGG - chr1_4:43938924-43938943 Msa0164460:CDS 40.0%
TGCTACAACGGCAAACATAA+GGG - chr1_4:43938925-43938944 Msa0164460:CDS 40.0%
! GTTCCACCAAACTTCGTTTT+TGG + chr1_4:43938989-43939008 None:intergenic 40.0%
TAAAAAATAGGACCTGCAGG+AGG - chr1_4:43939049-43939068 Msa0164460:CDS 40.0%
CCTAGCTAGTTAGTAACAAG+AGG + chr1_4:43939800-43939819 None:intergenic 40.0%
CCTCTTGTTACTAACTAGCT+AGG - chr1_4:43939797-43939816 Msa0164460:intron 40.0%
ACCAATATCAGGGAAAGCTT+CGG - chr1_4:43939970-43939989 Msa0164460:intron 40.0%
! ACTGCATTTTACGGATGGTA+AGG - chr1_4:43940019-43940038 Msa0164460:intron 40.0%
ACCACAAGTCTTCTAGATCT+AGG - chr1_4:43934713-43934732 Msa0164460:three_prime_UTR 40.0%
TCCTAGATCTAGAAGACTTG+TGG + chr1_4:43934717-43934736 None:intergenic 40.0%
GTATAAAGACATTGAGCTGG+GGG + chr1_4:43940220-43940239 None:intergenic 40.0%
! GACCAGTCTGAATTAGCTTA+TGG + chr1_4:43940249-43940268 None:intergenic 40.0%
! TAAGCTAATTCAGACTGGTC+TGG - chr1_4:43940249-43940268 Msa0164460:intron 40.0%
! GCTTTAGTTTCCATAGGCAT+AGG - chr1_4:43940594-43940613 Msa0164460:intron 40.0%
!! TGGCCAAAAGGTGTTTATGA+TGG - chr1_4:43940633-43940652 Msa0164460:intron 40.0%
TCTATTCATGTTACCAGGGA+TGG - chr1_4:43940762-43940781 Msa0164460:intron 40.0%
! CGAAGACCTTTTCTTCTTTC+GGG - chr1_4:43940948-43940967 Msa0164460:intron 40.0%
TTGGTTCCCGAAAGAAGAAA+AGG + chr1_4:43940957-43940976 None:intergenic 40.0%
CTGATGGAAACTTTGAGTGA+GGG - chr1_4:43941041-43941060 Msa0164460:intron 40.0%
!! TTTTGCTGTGCTGACGTTTT+TGG - chr1_4:43941136-43941155 Msa0164460:intron 40.0%
TTAATGGAGACTTCGCTAGT+TGG - chr1_4:43941192-43941211 Msa0164460:intron 40.0%
ATAGTTGTTGCGATTCCTGA+AGG - chr1_4:43941269-43941288 Msa0164460:intron 40.0%
TCTTTCTGCTTGTGAGACTA+TGG - chr1_4:43941367-43941386 Msa0164460:intron 40.0%
CTTTCTGCTTGTGAGACTAT+GGG - chr1_4:43941368-43941387 Msa0164460:intron 40.0%
! TGCATTTGCACTGATAAGAC+AGG - chr1_4:43941401-43941420 Msa0164460:intron 40.0%
GAAAAGACTGTGGAGATGAA+AGG - chr1_4:43941470-43941489 Msa0164460:intron 40.0%
!!! AGTTCTAAGCATCCTTTTGC+AGG - chr1_4:43941535-43941554 Msa0164460:intron 40.0%
!! TTGGAATTTGGCTTGGTTTC+AGG - chr1_4:43941644-43941663 Msa0164460:intron 40.0%
CTCAACCTTAAGTACCTTAC+AGG + chr1_4:43941696-43941715 None:intergenic 40.0%
TTGAGCCTTTCAATTCAGAC+AGG - chr1_4:43941711-43941730 Msa0164460:intron 40.0%
TTCAGACAGGAAGAAGATGT+CGG - chr1_4:43941724-43941743 Msa0164460:intron 40.0%
AGAATGCGGTATACTTACTG+AGG - chr1_4:43942129-43942148 Msa0164460:intron 40.0%
GAATGCGGTATACTTACTGA+GGG - chr1_4:43942130-43942149 Msa0164460:intron 40.0%
GAGAACAGAACCTGAATTCT+AGG + chr1_4:43942220-43942239 None:intergenic 40.0%
ACCCGTTTGAGGAATATGTT+TGG - chr1_4:43942356-43942375 Msa0164460:intron 40.0%
ACTACATAAGAACAGTGCAG+TGG + chr1_4:43942533-43942552 None:intergenic 40.0%
CTGCACTGTTCTTATGTAGT+TGG - chr1_4:43942533-43942552 Msa0164460:intron 40.0%
AGCAATTGAACAGCAGTTAG+TGG + chr1_4:43943315-43943334 None:intergenic 40.0%
!! ACCTCCTAATGATGGACTTA+TGG - chr1_4:43943386-43943405 Msa0164460:intron 40.0%
TCCATAAGTCCATCATTAGG+AGG + chr1_4:43943390-43943409 None:intergenic 40.0%
CTTATGGAAAGACAACCAGT+TGG - chr1_4:43943402-43943421 Msa0164460:intron 40.0%
! GATATTCCTCCACATTGGTT+TGG + chr1_4:43943448-43943467 None:intergenic 40.0%
CCAATGTGGAGGAATATCTT+CGG - chr1_4:43943450-43943469 Msa0164460:intron 40.0%
TGAGTACAGCAGTTGAATCT+GGG + chr1_4:43943548-43943567 None:intergenic 40.0%
TTGAGTACAGCAGTTGAATC+TGG + chr1_4:43943549-43943568 None:intergenic 40.0%
! CAACTCCTTTGTATTTTGCC+AGG - chr1_4:43943581-43943600 Msa0164460:intron 40.0%
GGCATTAGGCAGTTTGATTA+TGG + chr1_4:43943742-43943761 None:intergenic 40.0%
GAGGATTTCACCAACTATTC+TGG - chr1_4:43943955-43943974 Msa0164460:intron 40.0%
TGCGTCACACCTAGTATTTA+AGG + chr1_4:43944236-43944255 None:intergenic 40.0%
GATTACTTGAAATACCGCTG+TGG + chr1_4:43944428-43944447 None:intergenic 40.0%
CATTTGAGGATAGCAGCTAA+AGG + chr1_4:43944541-43944560 None:intergenic 40.0%
GTTGTGGTATCTCTTTCAAC+TGG + chr1_4:43944568-43944587 None:intergenic 40.0%
! ACCACAACAAAGCATCATGA+TGG - chr1_4:43944580-43944599 Msa0164460:five_prime_UTR 40.0%
! ACCATCATGATGCTTTGTTG+TGG + chr1_4:43944584-43944603 None:intergenic 40.0%
! CTTTGATGTGCTACACGTTT+TGG - chr1_4:43944810-43944829 Msa0164460:five_prime_UTR 40.0%
CCAACATCAGGGAAAGTTTC+GGG - chr1_4:43934557-43934576 Msa0164460:three_prime_UTR 45.0%
! CAGAGCAGCACTGCATTTTA+CGG - chr1_4:43934601-43934620 Msa0164460:three_prime_UTR 45.0%
! GCATTTTACGGCGGATGTTA+AGG - chr1_4:43934613-43934632 Msa0164460:three_prime_UTR 45.0%
GAGAGAGAGACGAAACGAAA+AGG + chr1_4:43934926-43934945 None:intergenic 45.0%
CAATCGAAGCTCTCACTAGA+TGG - chr1_4:43935103-43935122 Msa0164460:CDS 45.0%
ATGGAGAACTGCCGTTACTT+TGG - chr1_4:43935122-43935141 Msa0164460:intron 45.0%
TTCTTGAGCTAGAGCACGTT+TGG + chr1_4:43935190-43935209 None:intergenic 45.0%
GTTGTTTATTCCCTCCATCC+CGG - chr1_4:43935514-43935533 Msa0164460:intron 45.0%
AAACCAAGCTCGGATATACC+GGG + chr1_4:43935535-43935554 None:intergenic 45.0%
CTGATATTCCGGGATATTCC+GGG - chr1_4:43935716-43935735 Msa0164460:intron 45.0%
! ATTTTCACGTGCCTAGTGTG+TGG - chr1_4:43935928-43935947 Msa0164460:CDS 45.0%
ACCACTAAGTACAGTAGTGC+TGG + chr1_4:43935954-43935973 None:intergenic 45.0%
! AGAATTTTGTGTGGGACCCA+TGG - chr1_4:43937487-43937506 Msa0164460:CDS 45.0%
GGAGAGAGACTAAAAAGCCA+TGG + chr1_4:43937507-43937526 None:intergenic 45.0%
TTAGGTAAGTCATGACGACG+GGG + chr1_4:43937673-43937692 None:intergenic 45.0%
! CGGTCTAAGACTAACAGGTT+AGG + chr1_4:43937699-43937718 None:intergenic 45.0%
GGTCAATTATACTGGGAAGG+AGG - chr1_4:43937976-43937995 Msa0164460:CDS 45.0%
GATGCCGTCAATAGTGAACA+TGG + chr1_4:43938036-43938055 None:intergenic 45.0%
! TCGCGTTTCTTTTGTGGCAT+AGG - chr1_4:43938502-43938521 Msa0164460:CDS 45.0%
TTGTTACGTCGGCAAACACA+GGG + chr1_4:43938738-43938757 None:intergenic 45.0%
ATTGTTACGTCGGCAAACAC+AGG + chr1_4:43938739-43938758 None:intergenic 45.0%
GGGGGTCAAAATTGTTACGT+CGG + chr1_4:43938749-43938768 None:intergenic 45.0%
TGCGATTATGACCCCTGTTT+AGG - chr1_4:43938827-43938846 Msa0164460:CDS 45.0%
! TGACCCCTGTTTAGGACATA+TGG - chr1_4:43938835-43938854 Msa0164460:CDS 45.0%
CTGCCATATGTCCTAAACAG+GGG + chr1_4:43938841-43938860 None:intergenic 45.0%
GCTGCCATATGTCCTAAACA+GGG + chr1_4:43938842-43938861 None:intergenic 45.0%
AGCTGCCATATGTCCTAAAC+AGG + chr1_4:43938843-43938862 None:intergenic 45.0%
GCTACAACGGCAAACATAAG+GGG - chr1_4:43938926-43938945 Msa0164460:CDS 45.0%
CTGCCAAAAACGAAGTTTGG+TGG - chr1_4:43938983-43939002 Msa0164460:CDS 45.0%
AATTGATTGGAACCTCCTGC+AGG + chr1_4:43939064-43939083 None:intergenic 45.0%
CCAATATCAGGGAAAGCTTC+GGG - chr1_4:43939971-43939990 Msa0164460:intron 45.0%
! ACGAGCAGCACTGCATTTTA+CGG - chr1_4:43940010-43940029 Msa0164460:intron 45.0%
TCAGAAAAGACTAGAGCAGC+TGG - chr1_4:43940315-43940334 Msa0164460:intron 45.0%
!! AAGACTAGAGCAGCTGGTTT+TGG - chr1_4:43940321-43940340 Msa0164460:intron 45.0%
!!! AGCTGGTTTTGGTATCGAAC+CGG - chr1_4:43940332-43940351 Msa0164460:intron 45.0%
!! CTTTCCGTCTCAGTTGATGA+AGG - chr1_4:43940435-43940454 Msa0164460:intron 45.0%
GACACCTTCATCAACTGAGA+CGG + chr1_4:43940442-43940461 None:intergenic 45.0%
! CTTCTGTCTTTTACCATCCC+TGG + chr1_4:43940778-43940797 None:intergenic 45.0%
CAGGGATGGTAAAAGACAGA+AGG - chr1_4:43940776-43940795 Msa0164460:intron 45.0%
TGTTGGCATGAGAACTGAGT+GGG - chr1_4:43941013-43941032 Msa0164460:intron 45.0%
GCTGATGGAAACTTTGAGTG+AGG - chr1_4:43941040-43941059 Msa0164460:intron 45.0%
ATGGAAACTTTGAGTGAGGG+AGG - chr1_4:43941044-43941063 Msa0164460:intron 45.0%
CCATTCAATTTCACCTGCAG+TGG + chr1_4:43941083-43941102 None:intergenic 45.0%
CCACTGCAGGTGAAATTGAA+TGG - chr1_4:43941080-43941099 Msa0164460:intron 45.0%
!!! CGTTTTTGGTCTTGACAGCA+AGG - chr1_4:43941150-43941169 Msa0164460:intron 45.0%
ACAGCTAACGGTAATCCTTC+AGG + chr1_4:43941287-43941306 None:intergenic 45.0%
AACGTTGACGACCAACCATA+TGG - chr1_4:43941424-43941443 Msa0164460:intron 45.0%
!! GAATTTGGCTTGGTTTCAGG+TGG - chr1_4:43941647-43941666 Msa0164460:intron 45.0%
!! AAGAAGATGTCGGTGCTAGT+GGG - chr1_4:43941734-43941753 Msa0164460:intron 45.0%
ATGCACCTTTGCAGAAAGCT+CGG + chr1_4:43941778-43941797 None:intergenic 45.0%
ATATCCATTCTCCGGGATGT+TGG + chr1_4:43941972-43941991 None:intergenic 45.0%
GATAGCCATTGTGGGAATCA+AGG - chr1_4:43941997-43942016 Msa0164460:intron 45.0%
AGGATCCTTGATTCCCACAA+TGG + chr1_4:43942005-43942024 None:intergenic 45.0%
GAACAGCTTCCTTAACTCCA+GGG + chr1_4:43942033-43942052 None:intergenic 45.0%
TGAACAGCTTCCTTAACTCC+AGG + chr1_4:43942034-43942053 None:intergenic 45.0%
TCAGACAGATTGCGAAACTC+TGG + chr1_4:43942175-43942194 None:intergenic 45.0%
AGAGTTTCGCAATCTGTCTG+AGG - chr1_4:43942174-43942193 Msa0164460:intron 45.0%
TCTGTCTGAGGAGCAAATGA+AGG - chr1_4:43942186-43942205 Msa0164460:intron 45.0%
ACCAAGGTATGCTTGTCAAG+AGG + chr1_4:43942335-43942354 None:intergenic 45.0%
! ATACCTTGGTAACCCGTTTG+AGG - chr1_4:43942345-43942364 Msa0164460:intron 45.0%
!! ATTCCTCAAACGGGTTACCA+AGG + chr1_4:43942351-43942370 None:intergenic 45.0%
! GTTGTTGCTGTTACTGGTGA+TGG - chr1_4:43942383-43942402 Msa0164460:intron 45.0%
TCAGACATTGGACTTGCCAT+GGG - chr1_4:43942434-43942453 Msa0164460:intron 45.0%
! CACCACTCTAAAAAGTGGAG+GGG + chr1_4:43942668-43942687 None:intergenic 45.0%
! CCACCACTCTAAAAAGTGGA+GGG + chr1_4:43942669-43942688 None:intergenic 45.0%
! TCCACCACTCTAAAAAGTGG+AGG + chr1_4:43942670-43942689 None:intergenic 45.0%
!!! TCCACTTTTTAGAGTGGTGG+AGG - chr1_4:43942669-43942688 Msa0164460:intron 45.0%
TCAAAGTGGCAAAATGGGGA+CGG - chr1_4:43943097-43943116 Msa0164460:intron 45.0%
TTCGTTTCTGCATGCATCAC+TGG - chr1_4:43943192-43943211 Msa0164460:intron 45.0%
! TATGGACACTCTTGGTGCAT+TGG - chr1_4:43943350-43943369 Msa0164460:intron 45.0%
GCTACTGAACCTCCTAATGA+TGG - chr1_4:43943378-43943397 Msa0164460:intron 45.0%
CCGAAGATATTCCTCCACAT+TGG + chr1_4:43943453-43943472 None:intergenic 45.0%
! CGTTGATGAGACACATTACC+TGG + chr1_4:43943602-43943621 None:intergenic 45.0%
! AAGTGTTATTCTCGCCACAG+CGG - chr1_4:43944411-43944430 Msa0164460:five_prime_UTR 45.0%
ACCAGAATTGCCAGGTTAGA+GGG + chr1_4:43944486-43944505 None:intergenic 45.0%
AACCAGAATTGCCAGGTTAG+AGG + chr1_4:43944487-43944506 None:intergenic 45.0%
ACTGAGTAACCAGAATTGCC+AGG + chr1_4:43944494-43944513 None:intergenic 45.0%
!! CTTTGGTGAGAAGTTGGTGT+GGG + chr1_4:43944754-43944773 None:intergenic 45.0%
!! ACTTTGGTGAGAAGTTGGTG+TGG + chr1_4:43944755-43944774 None:intergenic 45.0%
!! TTGAAAAATAAAAAATAAAA+AGG + chr1_4:43935272-43935291 None:intergenic 5.0%
!!! TTATTAAATGATTTTTAATT+TGG - chr1_4:43935808-43935827 Msa0164460:intron 5.0%
CCCGAAACTTTCCCTGATGT+TGG + chr1_4:43934560-43934579 None:intergenic 50.0%
! AGCAGCACTGCATTTTACGG+CGG - chr1_4:43934604-43934623 Msa0164460:three_prime_UTR 50.0%
TGGTCAAGAATCCTCGTCGA+AGG - chr1_4:43935142-43935161 Msa0164460:intron 50.0%
ACGTTTCGAAACCTTCGACG+AGG + chr1_4:43935156-43935175 None:intergenic 50.0%
TGCAGACACATGGGACACAT+GGG - chr1_4:43935466-43935485 Msa0164460:intron 50.0%
TATTCCGGGATATTCCGGGA+CGG - chr1_4:43935720-43935739 Msa0164460:intron 50.0%
ATTAGATACTCCCTCCGTCC+CGG + chr1_4:43935737-43935756 None:intergenic 50.0%
GCCAGCACTACTGTACTTAG+TGG - chr1_4:43935950-43935969 Msa0164460:CDS 50.0%
GAACAAAGCACAGTTGTCGC+TGG - chr1_4:43937330-43937349 Msa0164460:CDS 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + chr1_4:43937780-43937799 None:intergenic 50.0%
TGTCAAACGGGGTTAGGCAA+AGG - chr1_4:43938196-43938215 Msa0164460:CDS 50.0%
! CAGCATTGAAGGGAACAACG+TGG + chr1_4:43938327-43938346 None:intergenic 50.0%
TGTTACGTCGGCAAACACAG+GGG + chr1_4:43938737-43938756 None:intergenic 50.0%
TGGCAGCTTCTCAGCATAGT+TGG - chr1_4:43938855-43938874 Msa0164460:CDS 50.0%
GGCAGCTTCTCAGCATAGTT+GGG - chr1_4:43938856-43938875 Msa0164460:CDS 50.0%
CCCGAAGCTTTCCCTGATAT+TGG + chr1_4:43939974-43939993 None:intergenic 50.0%
! GCAGCACTGCATTTTACGGA+TGG - chr1_4:43940014-43940033 Msa0164460:intron 50.0%
TGTGGGAATCCCTATGCCTA+TGG + chr1_4:43940607-43940626 None:intergenic 50.0%
GCATAGGGATTCCCACAGAA+GGG - chr1_4:43940610-43940629 Msa0164460:intron 50.0%
GGTGATCAAGTTCCAGCTGA+TGG - chr1_4:43940846-43940865 Msa0164460:intron 50.0%
TCGGGAACCAAAGTGCAAGA+TGG - chr1_4:43940966-43940985 Msa0164460:intron 50.0%
CGCTTGACCATCTTGCACTT+TGG + chr1_4:43940976-43940995 None:intergenic 50.0%
CTGTTGGCATGAGAACTGAG+TGG - chr1_4:43941012-43941031 Msa0164460:intron 50.0%
GTTGGCATGAGAACTGAGTG+GGG - chr1_4:43941014-43941033 Msa0164460:intron 50.0%
AACTGAGTGGGGAAAGCTGA+TGG - chr1_4:43941025-43941044 Msa0164460:intron 50.0%
AGAAGATGAGACTCCACTGC+AGG - chr1_4:43941067-43941086 Msa0164460:intron 50.0%
!! CTTCGCTAGTTGGTCTTCAG+AGG - chr1_4:43941202-43941221 Msa0164460:intron 50.0%
GTTGACGACCAACCATATGG+TGG - chr1_4:43941427-43941446 Msa0164460:intron 50.0%
TGCACAGCGTAGATCCTGTA+AGG - chr1_4:43941679-43941698 Msa0164460:intron 50.0%
!! GAAGAAGATGTCGGTGCTAG+TGG - chr1_4:43941733-43941752 Msa0164460:intron 50.0%
! TAGTGGGTCTTCCTGATGGA+GGG - chr1_4:43941750-43941769 Msa0164460:intron 50.0%
!! CGGGATGTTGGTTTCTCCTT+GGG + chr1_4:43941960-43941979 None:intergenic 50.0%
CCAAGGAGAAACCAACATCC+CGG - chr1_4:43941958-43941977 Msa0164460:intron 50.0%
GAAACCAACATCCCGGAGAA+TGG - chr1_4:43941965-43941984 Msa0164460:intron 50.0%
AGCAGGAATAAGCGTTCGCA+TGG - chr1_4:43942066-43942085 Msa0164460:intron 50.0%
ATAAGCGTTCGCATGGTCAC+CGG - chr1_4:43942073-43942092 Msa0164460:intron 50.0%
TGCGGTATACTTACTGAGGG+AGG - chr1_4:43942133-43942152 Msa0164460:intron 50.0%
! GAGGGAGGTGTAGCTATAGA+AGG - chr1_4:43942148-43942167 Msa0164460:intron 50.0%
GGTATGCTTGTCAAGAGGCA+AGG + chr1_4:43942330-43942349 None:intergenic 50.0%
GCCTCTTGACAAGCATACCT+TGG - chr1_4:43942331-43942350 Msa0164460:intron 50.0%
! GGTGAGGTTGTTGCTGTTAC+TGG - chr1_4:43942377-43942396 Msa0164460:intron 50.0%
GTCAGACATTGGACTTGCCA+TGG - chr1_4:43942433-43942452 Msa0164460:intron 50.0%
CTAGAGACAAACCTCGGTTC+CGG + chr1_4:43942465-43942484 None:intergenic 50.0%
! CACTCTAAAAAGTGGAGGGG+AGG + chr1_4:43942665-43942684 None:intergenic 50.0%
!!! CTCCCCTCCACTTTTTAGAG+TGG - chr1_4:43942663-43942682 Msa0164460:intron 50.0%
!!! CCCTCCACTTTTTAGAGTGG+TGG - chr1_4:43942666-43942685 Msa0164460:intron 50.0%
! GCCTCCACCACTCTAAAAAG+TGG + chr1_4:43942673-43942692 None:intergenic 50.0%
CAAAGTGGCAAAATGGGGAC+GGG - chr1_4:43943098-43943117 Msa0164460:intron 50.0%
!! CACTCTTGGTGCATTGGCTT+TGG - chr1_4:43943356-43943375 Msa0164460:intron 50.0%
TACCGAACCGGACATCAAAC+CGG - chr1_4:43943662-43943681 Msa0164460:intron 50.0%
! TCAGAGGCATGTTTGACAGC+TGG - chr1_4:43944380-43944399 Msa0164460:CDS 50.0%
TCCCTCTAACCTGGCAATTC+TGG - chr1_4:43944482-43944501 Msa0164460:intron 50.0%
CACACTCTTTCAGGACCAGA+AGG + chr1_4:43944619-43944638 None:intergenic 50.0%
! GTGCTGCTCTGCTCGTTGAA+CGG + chr1_4:43934592-43934611 None:intergenic 55.0%
GTGCAGACACATGGGACACA+TGG - chr1_4:43935465-43935484 Msa0164460:intron 55.0%
GCAGACACATGGGACACATG+GGG - chr1_4:43935467-43935486 Msa0164460:intron 55.0%
CAGACACATGGGACACATGG+GGG - chr1_4:43935468-43935487 Msa0164460:intron 55.0%
AGACACATGGGACACATGGG+GGG - chr1_4:43935469-43935488 Msa0164460:intron 55.0%
CTCGGATATACCGGGATGGA+GGG + chr1_4:43935527-43935546 None:intergenic 55.0%
CAAGCTCGGATATACCGGGA+TGG + chr1_4:43935531-43935550 None:intergenic 55.0%
CATCCCGGTATATCCGAGCT+TGG - chr1_4:43935529-43935548 Msa0164460:intron 55.0%
!! AGTAGTGCTGGCCACACACT+AGG + chr1_4:43935942-43935961 None:intergenic 55.0%
!! GAAAAGTACTCCCTCCGTCC+CGG - chr1_4:43937763-43937782 Msa0164460:CDS 55.0%
GTCAGTTATTCCGGGACGGA+GGG + chr1_4:43937776-43937795 None:intergenic 55.0%
GGGTTGGACGGCAATTAACG+TGG - chr1_4:43938403-43938422 Msa0164460:CDS 55.0%
GGACGGCAATTAACGTGGTC+TGG - chr1_4:43938408-43938427 Msa0164460:CDS 55.0%
GTTACGTCGGCAAACACAGG+GGG + chr1_4:43938736-43938755 None:intergenic 55.0%
! ATGCAGTGCTGCTCGTTGAG+CGG + chr1_4:43940006-43940025 None:intergenic 55.0%
GGCATAGGGATTCCCACAGA+AGG - chr1_4:43940609-43940628 Msa0164460:intron 55.0%
TAGGGATTCCCACAGAAGGG+TGG - chr1_4:43940613-43940632 Msa0164460:intron 55.0%
! CCTTTTGGCCACCCTTCTGT+GGG + chr1_4:43940624-43940643 None:intergenic 55.0%
! ACCTTTTGGCCACCCTTCTG+TGG + chr1_4:43940625-43940644 None:intergenic 55.0%
! GTGCTAGTGGGTCTTCCTGA+TGG - chr1_4:43941746-43941765 Msa0164460:intron 55.0%
! CTAGTGGGTCTTCCTGATGG+AGG - chr1_4:43941749-43941768 Msa0164460:intron 55.0%
AGTGGGTCTTCCTGATGGAG+GGG - chr1_4:43941751-43941770 Msa0164460:intron 55.0%
!! CCGGGATGTTGGTTTCTCCT+TGG + chr1_4:43941961-43941980 None:intergenic 55.0%
! ATGTCTGACTCGTGCAGTGC+AGG + chr1_4:43942422-43942441 None:intergenic 55.0%
GCACTGCACGAGTCAGACAT+TGG - chr1_4:43942422-43942441 Msa0164460:intron 55.0%
! GGAGGGGAGGAAGTACAAGA+GGG + chr1_4:43942652-43942671 None:intergenic 55.0%
! TGGAGGGGAGGAAGTACAAG+AGG + chr1_4:43942653-43942672 None:intergenic 55.0%
!! TTTTGAGGGGAAGAGGCTGC+TGG - chr1_4:43943512-43943531 Msa0164460:intron 55.0%
TTTGAGGGGAAGAGGCTGCT+GGG - chr1_4:43943513-43943532 Msa0164460:intron 55.0%
AAGAGGCTGCTGGGACTAAG+TGG - chr1_4:43943522-43943541 Msa0164460:intron 55.0%
ATCAAACCGGCGAGACCTCT+GGG - chr1_4:43943675-43943694 Msa0164460:intron 55.0%
GCAGCTGAACAATGACCCAG+AGG + chr1_4:43943693-43943712 None:intergenic 55.0%
!! CAGTGCTGGCAAATGTTCCC+AGG + chr1_4:43944462-43944481 None:intergenic 55.0%
!! GGTTATGAGGCACTGCCTTC+TGG - chr1_4:43944601-43944620 Msa0164460:five_prime_UTR 55.0%
ACATGGGACACATGGGGGGA+CGG - chr1_4:43935473-43935492 Msa0164460:intron 60.0%
GCTCGGATATACCGGGATGG+AGG + chr1_4:43935528-43935547 None:intergenic 60.0%
GGTCAGTTATTCCGGGACGG+AGG + chr1_4:43937777-43937796 None:intergenic 60.0%
CCCACAGAAGGGTGGCCAAA+AGG - chr1_4:43940621-43940640 Msa0164460:intron 60.0%
AAAGCTCGGACCCCTCCATC+AGG + chr1_4:43941764-43941783 None:intergenic 60.0%
GGGGTCCGAGCTTTCTGCAA+AGG - chr1_4:43941770-43941789 Msa0164460:intron 60.0%
ATCAAGGATCCTGTGCGCCC+TGG - chr1_4:43942013-43942032 Msa0164460:intron 60.0%
TCCTGTGCGCCCTGGAGTTA+AGG - chr1_4:43942021-43942040 Msa0164460:intron 60.0%
TCCTTAACTCCAGGGCGCAC+AGG + chr1_4:43942025-43942044 None:intergenic 60.0%
!! GTGCAGTGCAGGAGCATCGT+TGG + chr1_4:43942411-43942430 None:intergenic 60.0%
! GGACTTGCCATGGGCATTGC+CGG - chr1_4:43942443-43942462 Msa0164460:intron 60.0%
!! CGCCGGTTTGATGTCCGGTT+CGG + chr1_4:43943667-43943686 None:intergenic 60.0%
!! GGTCTCGCCGGTTTGATGTC+CGG + chr1_4:43943672-43943691 None:intergenic 60.0%
CATCAAACCGGCGAGACCTC+TGG - chr1_4:43943674-43943693 Msa0164460:intron 60.0%
CAATGACCCAGAGGTCTCGC+CGG + chr1_4:43943684-43943703 None:intergenic 60.0%
CCAGGTTAGAGGGACAGTGC+TGG + chr1_4:43944476-43944495 None:intergenic 60.0%
CCAGCACTGTCCCTCTAACC+TGG - chr1_4:43944473-43944492 Msa0164460:intron 60.0%
TCCGGGATATTCCGGGACGG+AGG - chr1_4:43935723-43935742 Msa0164460:intron 65.0%
CCCTCCGTCCCGGAATATCC+CGG + chr1_4:43935727-43935746 None:intergenic 65.0%
CCGGGATATTCCGGGACGGA+GGG - chr1_4:43935724-43935743 Msa0164460:intron 65.0%
CTCGGTTCCGGCAATGCCCA+TGG + chr1_4:43942453-43942472 None:intergenic 65.0%
! CATGGGCATTGCCGGAACCG+AGG - chr1_4:43942451-43942470 Msa0164460:intron 65.0%
GGGACACATGGGGGGACGGA+CGG - chr1_4:43935477-43935496 Msa0164460:intron 70.0%
CACATGGGGGGACGGACGGA+CGG - chr1_4:43935481-43935500 Msa0164460:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 43934482 43944981 43934482 ID=Msa0164460;Name=Msa0164460
chr1_4 mRNA 43934482 43944981 43934482 ID=Msa0164460-mRNA-1;Parent=Msa0164460;Name=Msa0164460-mRNA-1;_AED=0.08;_eAED=0.08;_QI=413|1|1|1|0.75|0.66|9|342|1033
chr1_4 exon 43934482 43935129 43934482 ID=Msa0164460-mRNA-1:exon:12568;Parent=Msa0164460-mRNA-1
chr1_4 exon 43935861 43936159 43935861 ID=Msa0164460-mRNA-1:exon:12567;Parent=Msa0164460-mRNA-1
chr1_4 exon 43936250 43936421 43936250 ID=Msa0164460-mRNA-1:exon:12566;Parent=Msa0164460-mRNA-1
chr1_4 exon 43936991 43937149 43936991 ID=Msa0164460-mRNA-1:exon:12565;Parent=Msa0164460-mRNA-1
chr1_4 exon 43937235 43939174 43937235 ID=Msa0164460-mRNA-1:exon:12564;Parent=Msa0164460-mRNA-1
chr1_4 exon 43939428 43939482 43939428 ID=Msa0164460-mRNA-1:exon:12563;Parent=Msa0164460-mRNA-1
chr1_4 exon 43944236 43944440 43944236 ID=Msa0164460-mRNA-1:exon:12562;Parent=Msa0164460-mRNA-1
chr1_4 exon 43944561 43944622 43944561 ID=Msa0164460-mRNA-1:exon:12561;Parent=Msa0164460-mRNA-1
chr1_4 exon 43944665 43944981 43944665 ID=Msa0164460-mRNA-1:exon:12560;Parent=Msa0164460-mRNA-1
chr1_4 five_prime_UTR 43944665 43944981 43944665 ID=Msa0164460-mRNA-1:five_prime_utr;Parent=Msa0164460-mRNA-1
chr1_4 five_prime_UTR 43944561 43944622 43944561 ID=Msa0164460-mRNA-1:five_prime_utr;Parent=Msa0164460-mRNA-1
chr1_4 five_prime_UTR 43944407 43944440 43944407 ID=Msa0164460-mRNA-1:five_prime_utr;Parent=Msa0164460-mRNA-1
chr1_4 CDS 43944236 43944406 43944236 ID=Msa0164460-mRNA-1:cds;Parent=Msa0164460-mRNA-1
chr1_4 CDS 43939428 43939482 43939428 ID=Msa0164460-mRNA-1:cds;Parent=Msa0164460-mRNA-1
chr1_4 CDS 43937235 43939174 43937235 ID=Msa0164460-mRNA-1:cds;Parent=Msa0164460-mRNA-1
chr1_4 CDS 43936991 43937149 43936991 ID=Msa0164460-mRNA-1:cds;Parent=Msa0164460-mRNA-1
chr1_4 CDS 43936250 43936421 43936250 ID=Msa0164460-mRNA-1:cds;Parent=Msa0164460-mRNA-1
chr1_4 CDS 43935861 43936159 43935861 ID=Msa0164460-mRNA-1:cds;Parent=Msa0164460-mRNA-1
chr1_4 CDS 43934824 43935129 43934824 ID=Msa0164460-mRNA-1:cds;Parent=Msa0164460-mRNA-1
chr1_4 three_prime_UTR 43934482 43934823 43934482 ID=Msa0164460-mRNA-1:three_prime_utr;Parent=Msa0164460-mRNA-1
Gene Sequence

>Msa0164460

ATGGAAGGTTATCTTAAGGATTTCGAATTGGAAGACAAGGATCGTTCAATCGAAGCTCTCACTAGATGGAGAACTGCCGTTACTTTGGTCAAGAATCCTCGTCGAAGGTTTCGAAACGTTGCAGATCTCGCCAAACGTGCTCTAGCTCAAGAAAAGCAGAAGAAAATTCAGGGAAAGCTTCGGGCTGTTATCACCGCTCAACGAGCAGCACTGCATTTTACGGATGCTATTGGTACACCTGAATTCAAGGTATCAGAAAAGACTAGAGCAGCTGGTTTTGGTATCGAACCGGATGATATTGCATCAGTTGTTCGAAGCCATGATTTCAAGAACTATAAAAAGGTTGGTGAAGTTCAAGGGATTACAAGTAAACTTTCCGTCTCAGTTGATGAAGGTGTCAGTCAAGACAGTATACATAGTAGGCAAGAGATTTATGGGCTCAACCGTTATACCGAGAAACCATCTAAAAGTTTTCTGATGTTTGTTTGGGATGCACTGCATGACTTAACACTGATCATTCTAATGGTTTGTGCTTTAGTTTCCATAGGCATAGGGATTCCCACAGAAGGGTGGCCAAAAGGTGTTTATGATGGTGTTGGAATCTTACTTAGTATATTCTTGGTTGTCACTGTTACTGCTATCAGTGACTATCAGCAATCTCTGCAGTTCTTAGATTTGGACAAAGAGAAGAAAAAGATTTCTATTCATGTTACCAGGGATGGTAAAAGACAGAAGGTTTCAATTTATGACTTGGTAGTTGGAGATATAGTTCATTTGTCAACTGGTGATCAAGTTCCAGCTGATGGAATTTTCATTCATGGATATTCATTGCTAATTGATGAATCAAGTTTGTCAGGTGAGAGCGAACCTGTAGATATAGACAATCGAAGACCTTTTCTTCTTTCGGGAACCAAAGTGCAAGATGGTCAAGCGAAGATGATAGTTACAACTGTTGGCATGAGAACTGAGTGGGGAAAGCTGATGGAAACTTTGAGTGAGGGAGGAGAAGATGAGACTCCACTGCAGGTGAAATTGAATGGAGTTGCTACAGTAATTGGTAAAATCGGTTTGACTTTTGCTGTGCTGACGTTTTTGGTCTTGACAGCAAGGTTTGTGATTGAAAAAGCAGTTAATGGAGACTTCGCTAGTTGGTCTTCAGAGGATGCACTGAAGCTACTAGATTACTTTGCCATTGCTGTAACTATAATAGTTGTTGCGATTCCTGAAGGATTACCGTTAGCTGTAACACTTAGTCTTGCATTTGCAATGAAAAAATTAATGAATGATAAGGCGCTTGTCAGACATCTTTCTGCTTGTGAGACTATGGGTTCAGCTAGTTGCATTTGCACTGATAAGACAGGAACGTTGACGACCAACCATATGGTGGTTGATAAAATTTGGATATGTGAAAAGACTGTGGAGATGAAAGGTGATGAAAGTACCGATAAGTTGAAATCAGAGATTTCTGATGAAGTTCTAAGCATCCTTTTGCAGGCTATATTTCAGAATACTTCTTCGGAAGTAGTTAAAGACAAAGAAGGAAAACAGACAATACTGGGAACACCAACAGAATCAGCAATATTGGAATTTGGCTTGGTTTCAGGTGGTGATTTCGATGCACAGCGTAGATCCTGTAAGGTACTTAAGGTTGAGCCTTTCAATTCAGACAGGAAGAAGATGTCGGTGCTAGTGGGTCTTCCTGATGGAGGGGTCCGAGCTTTCTGCAAAGGTGCATCAGAAATCGTGCTGAAAATGTGTGATAAAATCATTGATAGTAATGGAACAACTATTGATCTTCCTGAAGAGAAAGCAAAGATTGTGAATGACATTATAGATGGATTTGCCCATGAAGCTTTGAGAACTCTTTGTTTGGCTGTCAAAGACATAGATGAAACCCAAGGAGAAACCAACATCCCGGAGAATGGATATACTTTGATAGCCATTGTGGGAATCAAGGATCCTGTGCGCCCTGGAGTTAAGGAAGCTGTTCAAAAATGTTTAGCAGCAGGAATAAGCGTTCGCATGGTCACCGGCGATAACATAAATACAGCTAAGGCTATAGCTAAAGAATGCGGTATACTTACTGAGGGAGGTGTAGCTATAGAAGGACCAGAGTTTCGCAATCTGTCTGAGGAGCAAATGAAGGATATCATACCTAGAATTCAGGTAATGGCACGATCCTTGCCTCTTGACAAGCATACCTTGGTAACCCGTTTGAGGAATATGTTTGGTGAGGTTGTTGCTGTTACTGGTGATGGAACCAACGATGCTCCTGCACTGCACGAGTCAGACATTGGACTTGCCATGGGCATTGCCGGAACCGAGGTTGCCAAAGAAAATGCTGATGTCATTATAATGGACGACAACTTCACTACTATTGTCAAAGTGGCAAAATGGGGACGGGCCATATACATAAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTCAATGTTGTTGCTCTGATTACTAATTTCGTTTCTGCATGCATCACTGGTGCTGCTCCACTAACTGCTGTTCAATTGCTTTGGGTTAACTTGATTATGGACACTCTTGGTGCATTGGCTTTGGCTACTGAACCTCCTAATGATGGACTTATGGAAAGACAACCAGTTGGAAAGAAAGCAAGTTTTATTACCAAACCAATGTGGAGGAATATCTTCGGTCAAAGTTTGTATCAACTGATTGTCCTTGGAGTTCTAAATTTTGAGGGGAAGAGGCTGCTGGGACTAAGTGGCCCAGATTCAACTGCTGTACTCAACACTTTGATATTCAACTCCTTTGTATTTTGCCAGGTGTTCAATGAGATAAACAGCAGAGAAATTGAAAAGATAAACATATTCAGAGGCATGTTTGACAGCTGGATATTTTTAAGTGTTATTCTCGCCACAGCGGTATTTCAAGTAATCATAGTTGAGTTCCTGGGAACATTTGCCAGCACTGTCCCTCTAACCTGGCAATTCTGGTTACTCAGTTTGTTATTTGGTGTACTTAGCATGCCTTTAGCTGCTATCCTCAAATGCATACCAGTTGAAAGAGATACCACAACAAAGCATCATGATGGTTATGAGGCACTGCCTTCTGGTCCTGAAAGAGTGTGA
Protein sequence

>Msa0164460

MEGYLKDFELEDKDRSIEALTRWRTAVTLVKNPRRRFRNVADLAKRALAQEKQKKIQGKLRAVITAQRAALHFTDAIGTPEFKVSEKTRAAGFGIEPDDIASVVRSHDFKNYKKVGEVQGITSKLSVSVDEGVSQDSIHSRQEIYGLNRYTEKPSKSFLMFVWDALHDLTLIILMVCALVSIGIGIPTEGWPKGVYDGVGILLSIFLVVTVTAISDYQQSLQFLDLDKEKKKISIHVTRDGKRQKVSIYDLVVGDIVHLSTGDQVPADGIFIHGYSLLIDESSLSGESEPVDIDNRRPFLLSGTKVQDGQAKMIVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATVIGKIGLTFAVLTFLVLTARFVIEKAVNGDFASWSSEDALKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVDKIWICEKTVEMKGDESTDKLKSEISDEVLSILLQAIFQNTSSEVVKDKEGKQTILGTPTESAILEFGLVSGGDFDAQRRSCKVLKVEPFNSDRKKMSVLVGLPDGGVRAFCKGASEIVLKMCDKIIDSNGTTIDLPEEKAKIVNDIIDGFAHEALRTLCLAVKDIDETQGETNIPENGYTLIAIVGIKDPVRPGVKEAVQKCLAAGISVRMVTGDNINTAKAIAKECGILTEGGVAIEGPEFRNLSEEQMKDIIPRIQVMARSLPLDKHTLVTRLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFTTIVKVAKWGRAIYINIQKFVQFQLTVNVVALITNFVSACITGAAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMERQPVGKKASFITKPMWRNIFGQSLYQLIVLGVLNFEGKRLLGLSGPDSTAVLNTLIFNSFVFCQVFNEINSREIEKINIFRGMFDSWIFLSVILATAVFQVIIVEFLGTFASTVPLTWQFWLLSLLFGVLSMPLAAILKCIPVERDTTTKHHDGYEALPSGPERV*