AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0048990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0048990 MtrunA17_Chr4g0020111 94.852 1146 26 2 1 1135 1 1124 0.0 2226
Msa0048990 MtrunA17_Chr4g0036951 25.101 247 155 8 118 344 158 394 3.57e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0048990 AT3G63460.1 62.039 1167 346 19 1 1133 1 1104 0.0 1358
Msa0048990 AT3G63460.2 61.888 1165 349 18 1 1133 1 1102 0.0 1353
Msa0048990 AT3G63460.3 62.143 1157 351 19 1 1133 1 1094 0.0 1344
Msa0048990 AT1G18830.1 47.629 991 380 18 1 934 1 909 0.0 809
Msa0048990 AT1G18830.1 45.913 575 205 13 566 1133 494 969 1.07e-136 439
Msa0048990 AT1G18830.2 47.633 993 371 19 1 934 1 903 0.0 807
Msa0048990 AT1G18830.2 45.913 575 205 13 566 1133 488 963 9.75e-137 439
Msa0048990 AT1G18830.3 47.633 993 371 19 1 934 1 903 0.0 807
Msa0048990 AT1G18830.3 45.913 575 205 13 566 1133 488 963 9.75e-137 439
Msa0048990 AT4G35050.1 26.286 175 124 3 118 292 165 334 1.02e-12 72.0
Msa0048990 AT2G16780.1 27.273 176 121 4 118 292 164 333 1.58e-12 71.6
Msa0048990 AT1G11160.2 26.633 199 129 8 117 313 10 193 3.62e-11 68.2
Msa0048990 AT1G11160.4 26.633 199 129 8 117 313 10 193 3.69e-11 68.2
Msa0048990 AT1G11160.1 26.633 199 129 8 117 313 10 193 3.98e-11 68.2

Find 366 sgRNAs with CRISPR-Local

Find 1040 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACAATTTCAACCTAATT+AGG 0.159892 1_2:+2091292 Msa0048990:five_prime_UTR
TCGATGGGAATATTGATATT+TGG 0.185771 1_2:+2091603 Msa0048990:CDS
GGTTGTGCCCCGGAAGTATT+TGG 0.189839 1_2:-2102910 None:intergenic
AATGCATATCTGCTGATAAA+TGG 0.195041 1_2:+2097014 Msa0048990:CDS
AATGGAGTATCTAAAACTTT+TGG 0.202420 1_2:+2099685 Msa0048990:CDS
GAAATTGAGAATTGGAAAAT+TGG 0.209205 1_2:-2091271 None:intergenic
ATCGGTTTAATCGTCTTTCT+TGG 0.209964 1_2:+2091522 Msa0048990:CDS
CTGAGAAATTCGAATTGTTT+TGG 0.215530 1_2:-2091234 None:intergenic
TTGATAAAACTGTTGAAATT+TGG 0.223237 1_2:+2099384 Msa0048990:CDS
GCGTTAGACAATGGTGATTT+TGG 0.229013 1_2:+2103783 Msa0048990:CDS
ACAGGACGTTTATACCATTT+TGG 0.235325 1_2:-2096155 None:intergenic
TCTATCTCCCGCTTCTTTGC+TGG 0.236007 1_2:-2103666 None:intergenic
TACAGCTTCAAGAATTTAAA+TGG 0.236568 1_2:-2104493 None:intergenic
TTTGAAGCTGCGATACAAAA+TGG 0.240144 1_2:+2096402 Msa0048990:CDS
TGGTACTGCCCTTCAAATTC+AGG 0.241388 1_2:+2103803 Msa0048990:CDS
ATCTAGAGGCAGTAGTCTTT+TGG 0.248558 1_2:-2104099 None:intergenic
GCTGAGCACCGCCGTCTAAT+TGG 0.250564 1_2:-2093727 None:intergenic
CGGTGATGGAACAAATATAT+TGG 0.251317 1_2:-2100800 None:intergenic
CGTCCTGTTGGTGCGTCTTT+TGG 0.252389 1_2:+2096170 Msa0048990:CDS
CAATCTGGAGAGAGTGATTT+TGG 0.253431 1_2:+2095876 Msa0048990:CDS
TCGTCTGAAGATTTCGCTTT+TGG 0.273655 1_2:+2091560 Msa0048990:CDS
CTTGAAGCTGTACGTTATAT+AGG 0.274857 1_2:+2104504 Msa0048990:three_prime_UTR
ATTGTTCTTGCCTTGGCAAC+TGG 0.276135 1_2:+2099578 Msa0048990:CDS
AGATTGAAGGTGCAGGGTTT+TGG 0.277648 1_2:+2104118 Msa0048990:three_prime_UTR
CATGTGCCACCTGGTGTTTC+GGG 0.281081 1_2:+2100685 Msa0048990:CDS
TATATATTGTTAGGATTTGA+TGG 0.284496 1_2:+2099547 Msa0048990:intron
GGAATTATCAGCACCATAAT+AGG 0.287567 1_2:-2100513 None:intergenic
AGAGAATCGGAAACCTAATT+AGG 0.288059 1_2:-2091305 None:intergenic
GTGAAGTTTCATTCTTATCT+TGG 0.290394 1_2:+2093399 Msa0048990:CDS
ATCTTATGTTGATCTTCTTC+AGG 0.300841 1_2:+2099439 Msa0048990:CDS
GCACCTAATCTTCTTGCATC+TGG 0.307667 1_2:+2093167 Msa0048990:CDS
TGCTACATTATTCAATTGTT+TGG 0.311644 1_2:-2104453 None:intergenic
AATCGGCATATACAATATTA+AGG 0.314084 1_2:+2094916 Msa0048990:CDS
CTGGTAATGATTCACATAAT+TGG 0.314179 1_2:-2100534 None:intergenic
GAACCGATCACCATACTTAA+AGG 0.315500 1_2:+2097111 Msa0048990:CDS
TGGGGTGGCTGGTGTGGAAC+AGG 0.325565 1_2:-2100772 None:intergenic
AACAAATATATTGGGCTGTT+GGG 0.325988 1_2:-2100791 None:intergenic
ATATGCTGGGACACTATTTC+TGG 0.328889 1_2:+2094649 Msa0048990:CDS
GGTTGCACAGGTTGCGGTTG+AGG 0.331020 1_2:-2103303 None:intergenic
ACACCAGGCCTCTAAAATTC+TGG 0.331796 1_2:+2097298 Msa0048990:CDS
TCATGTGCCACCTGGTGTTT+CGG 0.332149 1_2:+2100684 Msa0048990:CDS
TATAGGCTTATCACGTCAAT+AGG 0.332795 1_2:+2104521 Msa0048990:three_prime_UTR
CACATATGTTATTAATAATA+TGG 0.334843 1_2:-2095833 None:intergenic
GGGTAGTGGCTCTGCTTCCC+AGG 0.336375 1_2:+2093376 Msa0048990:intron
GTCCAAGAGCATTTATTTCC+TGG 0.339697 1_2:-2096715 None:intergenic
TCCGCAACAAGAGGCAATTC+AGG 0.340566 1_2:-2091485 None:intergenic
CACCTAATCTTCTTGCATCT+GGG 0.341116 1_2:+2093168 Msa0048990:CDS
TGAAATTTGCATATGGGATT+TGG 0.341560 1_2:+2093202 Msa0048990:CDS
TCGGTTTAATCGTCTTTCTT+GGG 0.345401 1_2:+2091523 Msa0048990:CDS
TTAGCGTCCACTTCATATAA+TGG 0.345542 1_2:+2093443 Msa0048990:CDS
GGCTGTTGGGGTGGCTGGTG+TGG 0.347713 1_2:-2100778 None:intergenic
TATTGGGCTGTTGGGGTGGC+TGG 0.348166 1_2:-2100783 None:intergenic
TCACACGGTGGATCCTATTA+TGG 0.350516 1_2:+2100500 Msa0048990:CDS
GCCGCAACGTGTGGTAAGTT+CGG 0.351760 1_2:-2103189 None:intergenic
AAATTGAGAATTGGAAAATT+GGG 0.353836 1_2:-2091270 None:intergenic
CTATCTCCCGCTTCTTTGCT+GGG 0.363876 1_2:-2103665 None:intergenic
TTAGGTTTCCGATTCTCTAA+TGG 0.364837 1_2:+2091310 Msa0048990:exon
GTTGCACAGGTTGCGGTTGA+GGG 0.365086 1_2:-2103302 None:intergenic
CTCTCGTTGGGCACCTTGTA+AGG 0.368325 1_2:+2092990 Msa0048990:CDS
TGCCCCACAAACTCCTTTAC+TGG 0.372374 1_2:-2093923 None:intergenic
TTTAATAGTGGAATTAATAG+TGG 0.376313 1_2:-2091097 None:intergenic
TCAAACTTCCCAAATACTTC+CGG 0.377652 1_2:+2102901 Msa0048990:CDS
AATAGATATGTGCCTGGATA+TGG 0.378491 1_2:+2100745 Msa0048990:CDS
TGCAGCGTGCCTTAGTTGTT+GGG 0.394783 1_2:+2096969 Msa0048990:CDS
ACACACTTGCTTACACAGTT+TGG 0.396240 1_2:-2091033 None:intergenic
ATATCAACTACCTTTAAGTA+TGG 0.398810 1_2:-2097121 None:intergenic
ATGATCACTGTGCAGGGTAG+TGG 0.403924 1_2:+2093362 Msa0048990:intron
AAATTGTTGAAATTGAGAAT+TGG 0.404762 1_2:-2091279 None:intergenic
CATGAATCCAATTGGATTTG+AGG 0.406068 1_2:-2103217 None:intergenic
CTGCAGGGTTGCCGTCAATC+TGG 0.408603 1_2:+2095861 Msa0048990:CDS
GGTTCCAGCTGGCAATTCAT+AGG 0.410229 1_2:-2094822 None:intergenic
ATTGCACTGTCTACAGAAAC+TGG 0.412494 1_2:+2099752 Msa0048990:CDS
ATCTGATGCAACAGCAAGTT+GGG 0.415243 1_2:-2093776 None:intergenic
TAAACCTGGAAAATTACAAA+TGG 0.415716 1_2:-2096330 None:intergenic
GGAGTATCAGCTTTGGGACT+GGG 0.416076 1_2:-2096833 None:intergenic
TCCAAGAGCATTTATTTCCT+GGG 0.416970 1_2:-2096714 None:intergenic
TACCGCTGAGAGCTCCAAAA+TGG 0.419641 1_2:+2096141 Msa0048990:CDS
AAGGTTATGTTTGAAGATGA+TGG 0.419652 1_2:+2096611 Msa0048990:CDS
TCCCAGGAAATAAATGCTCT+TGG 0.421532 1_2:+2096713 Msa0048990:CDS
GGGGTTTGCATGAATCCAAT+TGG 0.425135 1_2:-2103225 None:intergenic
TTGAAGCTGCGATACAAAAT+GGG 0.425431 1_2:+2096403 Msa0048990:CDS
GGAATCCTCTTGCTCTGATT+CGG 0.425432 1_2:+2091624 Msa0048990:CDS
TCCCCTTGTGCTCATCCGAC+AGG 0.426401 1_2:-2099415 None:intergenic
ATGGTGATCGGTTCTTCTTA+AGG 0.426721 1_2:-2097102 None:intergenic
CAATGAGACATCGGAAGCAC+TGG 0.427338 1_2:+2103626 Msa0048990:CDS
ATATCAGCATCCTCCTTTGA+TGG 0.428360 1_2:+2094890 Msa0048990:CDS
CATTGGTATTCTAAGATACC+TGG 0.428825 1_2:+2094863 Msa0048990:CDS
TAGCGTCCACTTCATATAAT+GGG 0.429061 1_2:+2093444 Msa0048990:CDS
AACACTTCTATTACAAATGT+TGG 0.430549 1_2:-2104263 None:intergenic
ACAGTAGGTGGTGGAGCTGC+TGG 0.431026 1_2:-2103336 None:intergenic
ATTGACTTACCTGAATTTGA+AGG 0.431108 1_2:-2103812 None:intergenic
TGGAAAATTGGGAATGAAAG+TGG 0.434548 1_2:-2091259 None:intergenic
GGAAAATGTGTAGGCTCTAA+AGG 0.435285 1_2:-2093230 None:intergenic
AGATGGATCTCCTTCTATAA+AGG 0.436029 1_2:+2093801 Msa0048990:CDS
GACTACTGCCTCTAGATTGA+AGG 0.437916 1_2:+2104105 Msa0048990:three_prime_UTR
CTAATCAAAGCAGGAGTTTG+AGG 0.438681 1_2:-2102952 None:intergenic
CAAACTTCCCAAATACTTCC+GGG 0.438686 1_2:+2102902 Msa0048990:CDS
AAGCAAATAAGAGCTATCAT+TGG 0.439368 1_2:-2094602 None:intergenic
GGAGCTGCTGGTGCAGCAGC+CGG 0.439563 1_2:-2103324 None:intergenic
GGTGATGGAACAAATATATT+GGG 0.440504 1_2:-2100799 None:intergenic
CTCTAATGGCGTGTATCAAA+GGG 0.441491 1_2:+2091324 Msa0048990:exon
GCAGCCGGTTGCACAGGTTG+CGG 0.443676 1_2:-2103309 None:intergenic
GTTGTGCCCCGGAAGTATTT+GGG 0.444056 1_2:-2102909 None:intergenic
TCAACCGCAACCTGTGCAAC+CGG 0.444750 1_2:+2103305 Msa0048990:CDS
GATGGAGGAGTATCAGCTTT+GGG 0.445500 1_2:-2096839 None:intergenic
TGATTGGTAGGCGGGAAAGT+TGG 0.445971 1_2:-2103120 None:intergenic
AGAAATAGTGTCCCAGCATA+TGG 0.445983 1_2:-2094647 None:intergenic
TAACATATGTGATTATCTGC+AGG 0.446512 1_2:+2095845 Msa0048990:CDS
CACACTTGCTTCAAAACTCA+TGG 0.449916 1_2:+2099310 Msa0048990:CDS
GTTGGCTGCTGATATTGCTC+TGG 0.450535 1_2:-2102979 None:intergenic
ACTCCTCCATCTGCGGCTGC+TGG 0.451424 1_2:+2096851 Msa0048990:CDS
CTTAGTTGTTGGGGACTACA+AGG 0.452508 1_2:+2096979 Msa0048990:CDS
GATAATGTACCTGAGGAGGC+TGG 0.455712 1_2:-2100834 None:intergenic
CTTTGAACACCAGCAGAACT+AGG 0.456093 1_2:-2103246 None:intergenic
TCTGCTGGTGTTCAAAGACC+TGG 0.456847 1_2:+2103252 Msa0048990:CDS
TGGGCACCTTGTAAGGCATA+AGG 0.460092 1_2:+2092997 Msa0048990:CDS
AATTGCCAGCTGGAACCAAC+TGG 0.461754 1_2:+2094828 Msa0048990:CDS
GAACAAATATATTGGGCTGT+TGG 0.463838 1_2:-2100792 None:intergenic
GATGAATGCCAGTCCTGGTT+AGG 0.464830 1_2:+2103939 Msa0048990:CDS
GCAAGTTGGGTAGCAACATC+AGG 0.465260 1_2:-2093763 None:intergenic
ATGCATATCTGCTGATAAAT+GGG 0.466093 1_2:+2097015 Msa0048990:CDS
CAATTATGTGAATCATTACC+AGG 0.466289 1_2:+2100535 Msa0048990:CDS
TACTCAGCCCCAGCCTCCTC+AGG 0.466843 1_2:+2100825 Msa0048990:CDS
AGATGGAGGAGTATCAGCTT+TGG 0.467465 1_2:-2096840 None:intergenic
GGCACATATCTATTATCATA+TGG 0.467597 1_2:-2100736 None:intergenic
ACGACTCACCAGACCGTCTT+CGG 0.467782 1_2:-2096370 None:intergenic
CGATTAAACCGATCAGAGCT+AGG 0.468962 1_2:-2091512 None:intergenic
ATCGTACCGGCGGCGAGATA+CGG 0.469008 1_2:-2091386 None:intergenic
AGCGACTATACCTTTATAGA+AGG 0.469497 1_2:-2093811 None:intergenic
GCAGGAGGTGTAGGCTGGTA+AGG 0.470481 1_2:-2103144 None:intergenic
CTTGCATCTGGGGCTGAGGA+TGG 0.470536 1_2:+2093179 Msa0048990:CDS
TGTAGGCTGGTAAGGTTGAT+TGG 0.470667 1_2:-2103136 None:intergenic
TGCCTCTAGATTGAAGGTGC+AGG 0.470914 1_2:+2104111 Msa0048990:three_prime_UTR
GATACACGCCATTAGAGAAT+CGG 0.471608 1_2:-2091318 None:intergenic
CGGTTTAATCGTCTTTCTTG+GGG 0.471880 1_2:+2091524 Msa0048990:CDS
GGTGCAGCAGCCGGTTGCAC+AGG 0.472005 1_2:-2103315 None:intergenic
AGGAGTATCAGCTTTGGGAC+TGG 0.472072 1_2:-2096834 None:intergenic
TCTCTAATGGCGTGTATCAA+AGG 0.472203 1_2:+2091323 Msa0048990:exon
GCACCTACCTCAAATCCAAT+TGG 0.472269 1_2:+2103210 Msa0048990:CDS
ATAAATGCTCTTGGACTTGA+GGG 0.472750 1_2:+2096722 Msa0048990:CDS
TGTGGGTAGCACCTCCTTGT+GGG 0.472966 1_2:+2097060 Msa0048990:CDS
TGCTTTAGTTATTGCTCATG+TGG 0.472998 1_2:+2097042 Msa0048990:CDS
TCTTCTTGCATCTGGGGCTG+AGG 0.476232 1_2:+2093175 Msa0048990:CDS
TTCATCTGACTACTACTGAA+TGG 0.476275 1_2:+2103916 Msa0048990:CDS
TGGCAGATCTGAGGAGGAAA+GGG 0.477260 1_2:+2096571 Msa0048990:intron
AAGATAGCCGAACCATATGC+TGG 0.477553 1_2:+2094635 Msa0048990:CDS
TATGGCGGCTGATAGCTATC+AGG 0.477974 1_2:-2100718 None:intergenic
CCGCAACGTGTGGTAAGTTC+GGG 0.478470 1_2:-2103188 None:intergenic
CTGAGGAGGAAAGGGAAACA+TGG 0.478766 1_2:+2096579 Msa0048990:CDS
CTCGCCGCCGGTACGATGGC+CGG 0.481187 1_2:+2091392 Msa0048990:CDS
TAAGCTCCTTCAGCTTTGTC+AGG 0.481282 1_2:+2103761 Msa0048990:CDS
GACACCAGTAAAGGAGTTTG+TGG 0.482281 1_2:+2093919 Msa0048990:CDS
TGCTGGCAACTTTGTTGTTG+CGG 0.484143 1_2:+2096868 Msa0048990:CDS
AGCAAATAAGAGCTATCATT+GGG 0.484669 1_2:-2094601 None:intergenic
GGTAAGGTTGATTGGTAGGC+GGG 0.485124 1_2:-2103128 None:intergenic
TCATCTGACTACTACTGAAT+GGG 0.485486 1_2:+2103917 Msa0048990:CDS
GTGCAGCGTGCCTTAGTTGT+TGG 0.485780 1_2:+2096968 Msa0048990:CDS
TGGTGTTCAAAGACCTGGGG+TGG 0.487048 1_2:+2103257 Msa0048990:CDS
AAAATGAAAGTTCTCTCGTT+GGG 0.489231 1_2:+2092978 Msa0048990:CDS
AAACCTGGAAAATTACAAAT+GGG 0.490835 1_2:-2096329 None:intergenic
ATGCAAACCCCTAGTTCTGC+TGG 0.491193 1_2:+2103237 Msa0048990:CDS
AGGATGGTGAAATTTGCATA+TGG 0.491980 1_2:+2093195 Msa0048990:CDS
ATATTTATATTTCAGGTTCG+TGG 0.492179 1_2:+2093125 Msa0048990:intron
AGAAACAAAAGTCAGTGATA+AGG 0.492451 1_2:+2093597 Msa0048990:CDS
TTGCACAGGTTGCGGTTGAG+GGG 0.492712 1_2:-2103301 None:intergenic
GCGGCGAGATACGGTGCATC+CGG 0.492819 1_2:-2091377 None:intergenic
AAGCCAAAAGACGCACCAAC+AGG 0.493842 1_2:-2096173 None:intergenic
ATAATGTACCTGAGGAGGCT+GGG 0.494196 1_2:-2100833 None:intergenic
GCCCCAGATGCAAGAAGATT+AGG 0.494418 1_2:-2093170 None:intergenic
CAATATCAGCAGCCAACATT+GGG 0.495585 1_2:+2102985 Msa0048990:CDS
CCTTGGCAACTGGGCAGAAG+CGG 0.496888 1_2:+2099588 Msa0048990:CDS
CCATGTTATGCACATAAACC+TGG 0.497222 1_2:-2096344 None:intergenic
AGCTCTTATTTGCTTACTTG+TGG 0.497382 1_2:+2094610 Msa0048990:CDS
TTGTTCTTGCCTTGGCAACT+GGG 0.502136 1_2:+2099579 Msa0048990:CDS
GGCGTCAGTCGCACTGGCGC+CGG 0.502607 1_2:+2091358 Msa0048990:CDS
ACCTAATCTTCTTGCATCTG+GGG 0.503601 1_2:+2093169 Msa0048990:CDS
AAGTTCCAGTTGGTTCCAGC+TGG 0.504501 1_2:-2094833 None:intergenic
CTGCTGGTGTTCAAAGACCT+GGG 0.505096 1_2:+2103253 Msa0048990:CDS
GCCTCTAGATTGAAGGTGCA+GGG 0.507434 1_2:+2104112 Msa0048990:three_prime_UTR
ACACTTGCTTCAAAACTCAT+GGG 0.507512 1_2:+2099311 Msa0048990:CDS
AATCGAAGATGGTGTGGAAG+TGG 0.507656 1_2:+2096913 Msa0048990:CDS
GTATCCACTCATGTGCCGCC+TGG 0.507681 1_2:+2100658 Msa0048990:CDS
GACGGCTCCGGCCATCGTAC+CGG 0.508634 1_2:-2091399 None:intergenic
GCTCCATCTCACATTGGTCA+TGG 0.510684 1_2:+2103165 Msa0048990:CDS
TCCTGAATTGCCTCTTGTTG+CGG 0.511132 1_2:+2091484 Msa0048990:CDS
TCGATCGGCGTCAGTCGCAC+TGG 0.511220 1_2:+2091352 Msa0048990:CDS
AATCACTCTCTCCAGATTGA+CGG 0.512006 1_2:-2095872 None:intergenic
CTTGTAGTCCCCAACAACTA+AGG 0.513558 1_2:-2096978 None:intergenic
CCTGGTGTTCATGTGCCACC+TGG 0.514635 1_2:+2100676 Msa0048990:CDS
AAACGAGAGATCGACGGCTC+CGG 0.515220 1_2:-2091411 None:intergenic
CATCTGATGCAACAGCAAGT+TGG 0.515867 1_2:-2093777 None:intergenic
CATGGTCACCGAAGACGGTC+TGG 0.516956 1_2:+2096362 Msa0048990:CDS
GCAATATCAGCAGCCAACAT+TGG 0.517008 1_2:+2102984 Msa0048990:CDS
TGGTCAGTAAAGAGATCTGC+AGG 0.517978 1_2:-2095813 None:intergenic
ATGTGGGTAGCACCTCCTTG+TGG 0.518685 1_2:+2097059 Msa0048990:CDS
ATGGGGAAAGAACTTTGCTA+AGG 0.522620 1_2:+2096421 Msa0048990:CDS
GGGCACCTTGTAAGGCATAA+GGG 0.523302 1_2:+2092998 Msa0048990:CDS
TGCAAACCCAGCAAAGAAGC+GGG 0.523933 1_2:+2103659 Msa0048990:CDS
CCGGTCCCTTATGCCTTACA+AGG 0.525322 1_2:-2093003 None:intergenic
ACAAAACTTCTCACACACCT+TGG 0.525396 1_2:+2096644 Msa0048990:CDS
GACAACTCAAAGAGACTTGG+TGG 0.526126 1_2:+2103690 Msa0048990:CDS
ATAGGCTTATCACGTCAATA+GGG 0.526357 1_2:+2104522 Msa0048990:three_prime_UTR
TTTGAACACCAGCAGAACTA+GGG 0.527521 1_2:-2103245 None:intergenic
CCAGGTTTATGTGCATAACA+TGG 0.528026 1_2:+2096344 Msa0048990:CDS
TGAGGTTCAAATACTCTCAC+AGG 0.528455 1_2:-2102934 None:intergenic
AAGTTGCCAGCAGCCGCAGA+TGG 0.529794 1_2:-2096857 None:intergenic
GGTTGAATTGATCCCACCCC+AGG 0.529996 1_2:-2103270 None:intergenic
GCAATTCAGGATCATCGGAT+TGG 0.532349 1_2:-2091472 None:intergenic
TCGCTTCAGTGAACCTAACC+AGG 0.532419 1_2:-2103952 None:intergenic
GGTAGTGGCTCTGCTTCCCA+GGG 0.532786 1_2:+2093377 Msa0048990:CDS
TTTCTGTAGACAGTGCAATT+CGG 0.533051 1_2:-2099748 None:intergenic
TGCACAGGTTGCGGTTGAGG+GGG 0.534203 1_2:-2103300 None:intergenic
ACACTTTGTTATATATGTGC+TGG 0.534366 1_2:+2099356 Msa0048990:CDS
CGGAATACCCTAGCTCTGAT+CGG 0.536328 1_2:+2091504 Msa0048990:CDS
GTTGTTGCGGATAATGCAAA+CGG 0.538258 1_2:+2096881 Msa0048990:CDS
TCTGGATTTCTAATCAAAGC+AGG 0.539058 1_2:-2102961 None:intergenic
TAGTGTCCCAGCATATGGTT+CGG 0.540848 1_2:-2094642 None:intergenic
ATGGAGCAGGAGGTGTAGGC+TGG 0.541797 1_2:-2103149 None:intergenic
TTGCCAGCAGCCGCAGATGG+AGG 0.543716 1_2:-2096854 None:intergenic
CGATCTCTCGTTTAGCTCAT+CGG 0.545816 1_2:+2091421 Msa0048990:CDS
AACATATGTGATTATCTGCA+GGG 0.546152 1_2:+2095846 Msa0048990:CDS
AATAAATGCTCTTGGACTTG+AGG 0.546970 1_2:+2096721 Msa0048990:CDS
CCAGGTGGCACATGAACACC+AGG 0.547385 1_2:-2100676 None:intergenic
GAAAATGAAAGTTCTCTCGT+TGG 0.548861 1_2:+2092977 Msa0048990:CDS
TACAATTGAGAACCCAATGT+TGG 0.548964 1_2:-2102997 None:intergenic
TGATGCAGCTTTGGGATATG+AGG 0.549131 1_2:+2093888 Msa0048990:intron
CCGCTTCTGCCCAGTTGCCA+AGG 0.549646 1_2:-2099588 None:intergenic
GAGGATGCTGATATTACCCC+AGG 0.551365 1_2:-2094881 None:intergenic
ACACCAGTAAAGGAGTTTGT+GGG 0.551788 1_2:+2093920 Msa0048990:CDS
CATAACATGGTCACCGAAGA+CGG 0.552662 1_2:+2096357 Msa0048990:CDS
GTATCAGCAGTCTGCACAGT+AGG 0.554249 1_2:-2103351 None:intergenic
ACAAATATATTGGGCTGTTG+GGG 0.554458 1_2:-2100790 None:intergenic
ATGGCAGATCTGAGGAGGAA+AGG 0.555795 1_2:+2096570 Msa0048990:intron
GGATGGTGAAATTTGCATAT+GGG 0.556630 1_2:+2093196 Msa0048990:CDS
GGAACAGGAGCACCATATCC+AGG 0.557146 1_2:-2100757 None:intergenic
TATGATAATAGATATGTGCC+TGG 0.558314 1_2:+2100739 Msa0048990:CDS
GAGCCTGTCGGATGAGCACA+AGG 0.560286 1_2:+2099412 Msa0048990:CDS
AAGAGGCAATTCAGGATCAT+CGG 0.560501 1_2:-2091477 None:intergenic
GCTTTAGTTATTGCTCATGT+GGG 0.560611 1_2:+2097043 Msa0048990:CDS
ACTTCATATAATGGGACCAC+TGG 0.561714 1_2:+2093452 Msa0048990:CDS
TCTTGAGCCTTGTGAACACC+AGG 0.563652 1_2:+2097283 Msa0048990:CDS
TGACCAATGTGAGATGGAGC+AGG 0.564121 1_2:-2103162 None:intergenic
ATGTGTAGGCTCTAAAGGAT+TGG 0.564602 1_2:-2093225 None:intergenic
CCTCCTTGTGGGAAAGTACA+CGG 0.566304 1_2:+2097071 Msa0048990:CDS
TTTAATGGTGGAAAATGTGT+AGG 0.567179 1_2:-2093239 None:intergenic
TGCACACTGTCATCAAATGA+AGG 0.567213 1_2:-2096950 None:intergenic
TGTTTGCGAAGTTGAACAGT+GGG 0.567851 1_2:+2103715 Msa0048990:CDS
AGTTAATGATGATCTTTCCC+AGG 0.568244 1_2:+2096697 Msa0048990:CDS
TTGCTGGTGGATTAGTCGAT+GGG 0.568334 1_2:+2091588 Msa0048990:CDS
GCAGTCTGCACAGTAGGTGG+TGG 0.569747 1_2:-2103345 None:intergenic
TGGGGAAAGAACTTTGCTAA+GGG 0.570294 1_2:+2096422 Msa0048990:CDS
TTAGAGGCCTGGTGTTCACA+AGG 0.571264 1_2:-2097290 None:intergenic
AGCAAGTGTGTCGCAAAGCA+TGG 0.571471 1_2:-2099297 None:intergenic
AATCCAATTGGATTTGAGGT+AGG 0.571565 1_2:-2103213 None:intergenic
TGCTAATAACACAGGACATG+TGG 0.573127 1_2:+2096751 Msa0048990:CDS
AATTACCGAATCAGAGCAAG+AGG 0.573343 1_2:-2091629 None:intergenic
AATATATTGGGCTGTTGGGG+TGG 0.573545 1_2:-2100787 None:intergenic
CCACACCCCTCTGGTACCAA+TGG 0.574372 1_2:+2104330 Msa0048990:three_prime_UTR
GGAGGCTGGGGCTGAGTAGT+CGG 0.575306 1_2:-2100820 None:intergenic
GTATCTCGCCGCCGGTACGA+TGG 0.575567 1_2:+2091388 Msa0048990:CDS
TCAGTGAACCTAACCAGGAC+TGG 0.576182 1_2:-2103947 None:intergenic
AGGGTTGCTGACCACAGCAA+TGG 0.577792 1_2:+2099667 Msa0048990:CDS
TAAGAATGAAACTTCACCCT+GGG 0.578178 1_2:-2093393 None:intergenic
GCCTGTCGGATGAGCACAAG+GGG 0.578356 1_2:+2099414 Msa0048990:CDS
GGCTGGTAAGGTTGATTGGT+AGG 0.578536 1_2:-2103132 None:intergenic
TAATGTACCTGAGGAGGCTG+GGG 0.578752 1_2:-2100832 None:intergenic
CTTTGTCAGGCGTTAGACAA+TGG 0.579488 1_2:+2103774 Msa0048990:CDS
ACTGGAACTTTGATGTGCAT+TGG 0.579671 1_2:+2094846 Msa0048990:CDS
GGCGGTGCTCAGCTTTGCAG+TGG 0.579839 1_2:+2093737 Msa0048990:CDS
AGTGGTCCCATTATATGAAG+TGG 0.580024 1_2:-2093450 None:intergenic
CCTTGTAAGGCATAAGGGAC+CGG 0.582312 1_2:+2093003 Msa0048990:CDS
TGAGGAGGAAAGGGAAACAT+GGG 0.583309 1_2:+2096580 Msa0048990:CDS
TAGGAGTAATTGCAATGTCA+TGG 0.584321 1_2:+2094575 Msa0048990:intron
GCTGTTGCATCAGATGAAGA+TGG 0.584989 1_2:+2093784 Msa0048990:CDS
GGTGTTCAAAGACCTGGGGT+GGG 0.586052 1_2:+2103258 Msa0048990:CDS
TTGTTATGGCAGATCTGAGG+AGG 0.586932 1_2:+2096565 Msa0048990:intron
GAATACAATGACACCAGTAA+AGG 0.590713 1_2:+2093910 Msa0048990:CDS
AGACAAAATCGAAGATGGTG+TGG 0.591708 1_2:+2096907 Msa0048990:CDS
TATCAAAGGGGTTAATCGAT+CGG 0.592079 1_2:+2091337 Msa0048990:CDS
TGAGATGGAGCAGGAGGTGT+AGG 0.593576 1_2:-2103153 None:intergenic
GTTGCTGGTGGATTAGTCGA+TGG 0.593667 1_2:+2091587 Msa0048990:CDS
CACTTGCTTCAAAACTCATG+GGG 0.594256 1_2:+2099312 Msa0048990:CDS
GGCTCCGGCCATCGTACCGG+CGG 0.594492 1_2:-2091396 None:intergenic
TGCTGGTGTTCAAAGACCTG+GGG 0.595525 1_2:+2103254 Msa0048990:CDS
GGGCCATGACCAATGTGAGA+TGG 0.595587 1_2:-2103168 None:intergenic
GCATCACCATTGGTACCAGA+GGG 0.595823 1_2:-2104336 None:intergenic
AAATGGTATAAACGTCCTGT+TGG 0.596215 1_2:+2096158 Msa0048990:CDS
AATGGGATGAATGCCAGTCC+TGG 0.596743 1_2:+2103934 Msa0048990:CDS
TTGACTTACCTGAATTTGAA+GGG 0.596880 1_2:-2103811 None:intergenic
TAACCGACACTAGAACAGCT+TGG 0.596921 1_2:-2104360 None:intergenic
CTTGTCAATGATGTGACGAT+AGG 0.599436 1_2:-2103597 None:intergenic
TTATTGTTATGGCAGATCTG+AGG 0.600704 1_2:+2096562 Msa0048990:intron
AAACTGTTGAAATTTGGTCA+AGG 0.601007 1_2:+2099390 Msa0048990:CDS
ACAGCTTGGAGCATCACCAT+TGG 0.601613 1_2:-2104346 None:intergenic
AGCTGATACTCCTCCATCTG+CGG 0.601962 1_2:+2096844 Msa0048990:CDS
ATTGCCTATGAATTGCCAGC+TGG 0.603643 1_2:+2094818 Msa0048990:CDS
AACACCAGGCGGCACATGAG+TGG 0.604543 1_2:-2100662 None:intergenic
GGTTCAGACAAAATCGAAGA+TGG 0.604622 1_2:+2096902 Msa0048990:CDS
GGTTTAATCGTCTTTCTTGG+GGG 0.606133 1_2:+2091525 Msa0048990:CDS
AATGAGACATCGGAAGCACT+GGG 0.606396 1_2:+2103627 Msa0048990:CDS
CTACCTTTAAGTATGGTGAT+CGG 0.607964 1_2:-2097114 None:intergenic
GCTCCAAGCTGTTCTAGTGT+CGG 0.608970 1_2:+2104357 Msa0048990:three_prime_UTR
TGGGGCTGAGTAGTCGGTGA+TGG 0.609730 1_2:-2100814 None:intergenic
GAGGTAGGTGCCGCAACGTG+TGG 0.610907 1_2:-2103198 None:intergenic
GAGTTTGTGGGGCACACTAG+AGG 0.611441 1_2:+2093932 Msa0048990:CDS
TCTCACAGGAGGTTGTGCCC+CGG 0.613180 1_2:-2102920 None:intergenic
GATTAAACCGATCAGAGCTA+GGG 0.614029 1_2:-2091511 None:intergenic
TACACTGCAAAGAAGAGCAA+GGG 0.615885 1_2:-2097328 None:intergenic
AGATAGCCGAACCATATGCT+GGG 0.617869 1_2:+2094636 Msa0048990:CDS
TATTGACCTCCCGAAACACC+AGG 0.617966 1_2:-2100694 None:intergenic
CACTAGGTACATTGAAACCA+AGG 0.618104 1_2:-2096661 None:intergenic
CCCGAACTTACCACACGTTG+CGG 0.618481 1_2:+2103188 Msa0048990:CDS
CTCCTTGTGGGAAAGTACAC+GGG 0.618650 1_2:+2097072 Msa0048990:CDS
ATTGGTATTCTAAGATACCT+GGG 0.618870 1_2:+2094864 Msa0048990:CDS
GATGCACCGTATCTCGCCGC+CGG 0.619967 1_2:+2091380 Msa0048990:CDS
GAAGACAACTCAAAGAGACT+TGG 0.620316 1_2:+2103687 Msa0048990:CDS
GCTGATACTTCAAAAGTACC+TGG 0.620679 1_2:+2103366 Msa0048990:CDS
GTGCAAACCCAGCAAAGAAG+CGG 0.621744 1_2:+2103658 Msa0048990:CDS
GCAGCGTGCCTTAGTTGTTG+GGG 0.623583 1_2:+2096970 Msa0048990:CDS
AAGTCTCTGACCTTTAATGG+TGG 0.624277 1_2:-2093251 None:intergenic
TCAGCAGTCTGCACAGTAGG+TGG 0.627327 1_2:-2103348 None:intergenic
GTGCCACCTGGTGTTTCGGG+AGG 0.627994 1_2:+2100688 Msa0048990:CDS
AGCATCACCATTGGTACCAG+AGG 0.629497 1_2:-2104337 None:intergenic
CTGGGACACTATTTCTGGAG+AGG 0.630253 1_2:+2094654 Msa0048990:CDS
CTATCGTCACATCATTGACA+AGG 0.630541 1_2:+2103598 Msa0048990:CDS
CTAACGCCTGACAAAGCTGA+AGG 0.632091 1_2:-2103767 None:intergenic
ACCCTGCACCTTCAATCTAG+AGG 0.632949 1_2:-2104113 None:intergenic
AGTTTGCTCAGAGAGATGAA+TGG 0.633225 1_2:+2099273 Msa0048990:intron
CTAGGGTATTCCGCAACAAG+AGG 0.634870 1_2:-2091494 None:intergenic
TTACACTGCAAAGAAGAGCA+AGG 0.635747 1_2:-2097329 None:intergenic
TTGAACACCAGCAGAACTAG+GGG 0.636185 1_2:-2103244 None:intergenic
ATGCACATCAAAGTTCCAGT+TGG 0.638147 1_2:-2094843 None:intergenic
ATCCCGTGTACTTTCCCACA+AGG 0.639085 1_2:-2097074 None:intergenic
CCATTGGTACCAGAGGGGTG+TGG 0.641849 1_2:-2104330 None:intergenic
CCTCCTGCTCCATCTCACAT+TGG 0.644143 1_2:+2103159 Msa0048990:CDS
CACCAGTAAAGGAGTTTGTG+GGG 0.652466 1_2:+2093921 Msa0048990:CDS
ACAACTCAAAGAGACTTGGT+GGG 0.658321 1_2:+2103691 Msa0048990:CDS
GGCACATCTGCTAATAACAC+AGG 0.659098 1_2:+2096743 Msa0048990:CDS
CTCAACAAGCTTGCACAGAG+AGG 0.663580 1_2:-2099618 None:intergenic
GGTTCAAATACTCTCACAGG+AGG 0.663986 1_2:-2102931 None:intergenic
TGAGCTAAACGAGAGATCGA+CGG 0.665152 1_2:-2091417 None:intergenic
ATAAGAATGAAACTTCACCC+TGG 0.667025 1_2:-2093394 None:intergenic
TGGTAAGGTTGATTGGTAGG+CGG 0.668224 1_2:-2103129 None:intergenic
TGAAGCTGCGATACAAAATG+GGG 0.668775 1_2:+2096404 Msa0048990:CDS
TTTGAAAATTCTCAATCACA+CGG 0.668908 1_2:+2100485 Msa0048990:CDS
GCGTTGTAGATCCAATTAGA+CGG 0.670674 1_2:+2093716 Msa0048990:intron
ATATGATAATGTACCTGAGG+AGG 0.673000 1_2:-2100838 None:intergenic
ACATATCTATTATCATATGG+CGG 0.674313 1_2:-2100733 None:intergenic
TTGTTTGCGAAGTTGAACAG+TGG 0.681960 1_2:+2103714 Msa0048990:CDS
GATAAATGTTCTCAGCTCGG+AGG 0.689481 1_2:+2092955 Msa0048990:intron
GAAAATTCTCAATCACACGG+TGG 0.695077 1_2:+2100488 Msa0048990:CDS
TTGGTATTCTAAGATACCTG+GGG 0.695488 1_2:+2094865 Msa0048990:CDS
AATTTGGTCAAGGAGCCTGT+CGG 0.698497 1_2:+2099400 Msa0048990:CDS
CCGTGTACTTTCCCACAAGG+AGG 0.701277 1_2:-2097071 None:intergenic
AAACTTCCCAAATACTTCCG+GGG 0.701878 1_2:+2102903 Msa0048990:CDS
CCAATGTGAGATGGAGCAGG+AGG 0.712196 1_2:-2103159 None:intergenic
ACTTGCTTCAAAACTCATGG+GGG 0.722564 1_2:+2099313 Msa0048990:CDS
TCTAATGGCGTGTATCAAAG+GGG 0.723210 1_2:+2091325 Msa0048990:exon
GTTTGCGAAGTTGAACAGTG+GGG 0.732513 1_2:+2103716 Msa0048990:CDS
GGTGGCACATGAACACCAGG+CGG 0.736298 1_2:-2100673 None:intergenic
GAGGAGGAAAGGGAAACATG+GGG 0.738395 1_2:+2096581 Msa0048990:CDS
GAGACATCGGAAGCACTGGG+AGG 0.751405 1_2:+2103630 Msa0048990:CDS
TTGTAGATCCAATTAGACGG+CGG 0.753797 1_2:+2093719 Msa0048990:CDS
AGCCTGTCGGATGAGCACAA+GGG 0.756736 1_2:+2099413 Msa0048990:CDS
TGACCTCCCGAAACACCAGG+TGG 0.768090 1_2:-2100691 None:intergenic
CATCACCATTGGTACCAGAG+GGG 0.773527 1_2:-2104335 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTCAAAAAAAAAAAACTAT+AGG - chr1_2:2092152-2092171 None:intergenic 10.0%
!! CTAAAAAATTAAATATATGA+AGG - chr1_2:2095695-2095714 None:intergenic 10.0%
!!! TTTTGAATTTTTTACATTTT+AGG + chr1_2:2095779-2095798 Msa0048990:intron 10.0%
!!! TATGTTTTCTTTTTTTTTTT+TGG + chr1_2:2096035-2096054 Msa0048990:intron 10.0%
!! ATAAATTTCTTGTTAATTTA+AGG + chr1_2:2097607-2097626 Msa0048990:intron 10.0%
!! TAAAATAAAATGTTTATACA+AGG - chr1_2:2102718-2102737 None:intergenic 10.0%
!!! TATTTTTCTCAAATTACTAT+TGG - chr1_2:2092261-2092280 None:intergenic 15.0%
!! ATATGATATTGTTTATTCTA+TGG + chr1_2:2092423-2092442 Msa0048990:intron 15.0%
!! TATGATATTGTTTATTCTAT+GGG + chr1_2:2092424-2092443 Msa0048990:intron 15.0%
!! TAACATAGATTGTATATAAA+TGG - chr1_2:2092586-2092605 None:intergenic 15.0%
!! AGGAAAAAAAAAAATCATTA+AGG - chr1_2:2092930-2092949 None:intergenic 15.0%
!! AATGAGAACAATATATATAA+AGG - chr1_2:2093499-2093518 None:intergenic 15.0%
!!! TTTTTATGCGTTTTTTATTT+TGG + chr1_2:2093546-2093565 Msa0048990:intron 15.0%
!! ATGAATCATAAATAAATGAA+TGG - chr1_2:2093967-2093986 None:intergenic 15.0%
!! AGAATAAAACAAAAAAGAAA+AGG - chr1_2:2094027-2094046 None:intergenic 15.0%
!! TATAGAATTTGTATATTACA+TGG + chr1_2:2094181-2094200 Msa0048990:intron 15.0%
!! ATAGAATTTGTATATTACAT+GGG + chr1_2:2094182-2094201 Msa0048990:intron 15.0%
!!! TAACATTTTGCTTATAATTT+AGG + chr1_2:2095541-2095560 Msa0048990:intron 15.0%
!!! TAACATTTTGCTTAAAATTT+AGG + chr1_2:2095669-2095688 Msa0048990:intron 15.0%
!! AAATGTAAAAAATTCAAAAC+AGG - chr1_2:2095778-2095797 None:intergenic 15.0%
!! CACATATGTTATTAATAATA+TGG - chr1_2:2095836-2095855 None:intergenic 15.0%
!! ACAAGAAATTTATTTATTCT+TGG - chr1_2:2097600-2097619 None:intergenic 15.0%
!! ATTGTAGAAATTAATCAATT+GGG - chr1_2:2097755-2097774 None:intergenic 15.0%
!! AATTGTAGAAATTAATCAAT+TGG - chr1_2:2097756-2097775 None:intergenic 15.0%
!!! TTGATACTTTTATTTGTAAT+TGG + chr1_2:2099467-2099486 Msa0048990:intron 15.0%
!! TACCGAAAAAAAATAATAAT+TGG + chr1_2:2100040-2100059 Msa0048990:intron 15.0%
!!! CACCAATTATTATTTTTTTT+CGG - chr1_2:2100045-2100064 None:intergenic 15.0%
!! TTAAAATAATTCAGTGTAAA+TGG + chr1_2:2100215-2100234 Msa0048990:intron 15.0%
!!! TTAGATTTAGGATAAAAATT+GGG + chr1_2:2102152-2102171 Msa0048990:intron 15.0%
!! CAAAAATTATATCAAAGAAA+AGG - chr1_2:2104399-2104418 None:intergenic 15.0%
!!! GAATTAATAGTGGAAATTTT+TGG - chr1_2:2091090-2091109 None:intergenic 20.0%
!!! TTTAATAGTGGAATTAATAG+TGG - chr1_2:2091100-2091119 None:intergenic 20.0%
!! AAATTGAGAATTGGAAAATT+GGG - chr1_2:2091273-2091292 None:intergenic 20.0%
!! AAATTGTTGAAATTGAGAAT+TGG - chr1_2:2091282-2091301 None:intergenic 20.0%
!!! TTTTGAATTGATTGAAGATA+TGG + chr1_2:2091725-2091744 Msa0048990:intron 20.0%
!!! GATAATTGTTAGTGTTTTTA+TGG + chr1_2:2091802-2091821 Msa0048990:intron 20.0%
!! AGAGAAATGATATATTGAAA+TGG - chr1_2:2092106-2092125 None:intergenic 20.0%
!! CATCAAAGATTAATAACAAA+AGG + chr1_2:2092173-2092192 Msa0048990:intron 20.0%
!! GTTATAATTTGAGTGTAATT+TGG - chr1_2:2092617-2092636 None:intergenic 20.0%
!! CAAATTATAACACTATAGAA+TGG + chr1_2:2092626-2092645 Msa0048990:intron 20.0%
!!! ACTTGTAATTTTGTATATGT+AGG + chr1_2:2092847-2092866 Msa0048990:intron 20.0%
!! CTTTGACATATTTATATTTC+AGG + chr1_2:2093118-2093137 Msa0048990:intron 20.0%
!!! ATATATTTTCAATGGATTTG+TGG - chr1_2:2094061-2094080 None:intergenic 20.0%
!! ACAAATCCATTGAAAATATA+TGG + chr1_2:2094060-2094079 Msa0048990:intron 20.0%
!!! TTGTTTCCATATATTTTCAA+TGG - chr1_2:2094069-2094088 None:intergenic 20.0%
!!! TATAGAATTTTTTTTCCCTA+TGG + chr1_2:2094313-2094332 Msa0048990:intron 20.0%
!! CTGTAAAATTAATGTGAAAA+TGG + chr1_2:2094416-2094435 Msa0048990:intron 20.0%
!! AAAATTAATGTGAAAATGGA+TGG + chr1_2:2094420-2094439 Msa0048990:intron 20.0%
!!! GGTAGCATTTTTTTTATTTT+AGG + chr1_2:2094441-2094460 Msa0048990:intron 20.0%
!!! TTTGGAAGATTTTCTATTAT+AGG + chr1_2:2094738-2094757 Msa0048990:intron 20.0%
!! TGATTGTTCACAAATTTAAT+AGG + chr1_2:2095115-2095134 Msa0048990:intron 20.0%
!!! TTAATAGGTAGTTGTTATTA+TGG + chr1_2:2095130-2095149 Msa0048990:intron 20.0%
!! TAATTAAAGGGAAATGAAAT+TGG - chr1_2:2095421-2095440 None:intergenic 20.0%
!! TATGATAGTAACTTATTTGA+TGG - chr1_2:2095940-2095959 None:intergenic 20.0%
!!! TTTTTTTTTTTGGTTAAGCA+AGG + chr1_2:2096045-2096064 Msa0048990:intron 20.0%
!!! AATAATTTCTTTTTGGACAA+CGG + chr1_2:2096788-2096807 Msa0048990:CDS 20.0%
!! TACAAAAACAAATATCTTGT+TGG - chr1_2:2097200-2097219 None:intergenic 20.0%
!! AGTTGTCTAAATTGATTAAA+AGG + chr1_2:2097392-2097411 Msa0048990:intron 20.0%
!! GTTGTCTAAATTGATTAAAA+GGG + chr1_2:2097393-2097412 Msa0048990:intron 20.0%
!! TGGAAAACAGAAATATTTAT+TGG + chr1_2:2097689-2097708 Msa0048990:intron 20.0%
!! AGATAAAGAAAAAGAATCAA+AGG - chr1_2:2098599-2098618 None:intergenic 20.0%
!!! AAACAAATTAGTTTGTTGAT+AGG - chr1_2:2099018-2099037 None:intergenic 20.0%
!! TTGATAAAACTGTTGAAATT+TGG + chr1_2:2099384-2099403 Msa0048990:CDS 20.0%
!! TATATATTGTTAGGATTTGA+TGG + chr1_2:2099547-2099566 Msa0048990:intron 20.0%
!! ATAGAGGAAAATAGTAAAAA+TGG + chr1_2:2099816-2099835 Msa0048990:intron 20.0%
!!! ACATAATCATTTTGATATGA+AGG + chr1_2:2100291-2100310 Msa0048990:intron 20.0%
!! AAAGAAAGTGAAGAAATTAT+GGG - chr1_2:2100412-2100431 None:intergenic 20.0%
!! AAAAGAAAGTGAAGAAATTA+TGG - chr1_2:2100413-2100432 None:intergenic 20.0%
!!! TTTAGTTGATGTTTTCTTTA+GGG - chr1_2:2101997-2102016 None:intergenic 20.0%
!!! TTTTAGTTGATGTTTTCTTT+AGG - chr1_2:2101998-2102017 None:intergenic 20.0%
!!! GTTAGATTTAGGATAAAAAT+TGG + chr1_2:2102151-2102170 Msa0048990:intron 20.0%
!!! ATAGCTATACGTATATTTTA+TGG - chr1_2:2102397-2102416 None:intergenic 20.0%
!!! TTTTGCTTTATTTTTGTTGT+TGG + chr1_2:2102626-2102645 Msa0048990:intron 20.0%
!! AATAAAATGTTTATACAAGG+AGG - chr1_2:2102715-2102734 None:intergenic 20.0%
!! TTAAATACTTAAAGAACAGT+TGG + chr1_2:2102755-2102774 Msa0048990:intron 20.0%
!! GATTGAAGATTAAAGAAATA+GGG - chr1_2:2102866-2102885 None:intergenic 20.0%
!! AAAGTAAAAGAAATATTACC+AGG - chr1_2:2103387-2103406 None:intergenic 20.0%
!! ATAGACTAAACTAAATATAC+TGG + chr1_2:2103430-2103449 Msa0048990:intron 20.0%
!!! TGTTTATTTTATGAGTAAGA+AGG + chr1_2:2103453-2103472 Msa0048990:intron 20.0%
!! TAAAATGTAAGTTTGATGTA+TGG - chr1_2:2103872-2103891 None:intergenic 20.0%
! GAAATTGAGAATTGGAAAAT+TGG - chr1_2:2091274-2091293 None:intergenic 25.0%
! TCAACAATTTCAACCTAATT+AGG + chr1_2:2091292-2091311 Msa0048990:five_prime_UTR 25.0%
! TATGCAAATCAAAGTTCAAT+TGG + chr1_2:2091875-2091894 Msa0048990:intron 25.0%
!!! TGTCATTTTCTCAGTTTATT+AGG + chr1_2:2091969-2091988 Msa0048990:intron 25.0%
! TATCATATATGTCTAACAGA+GGG - chr1_2:2092411-2092430 None:intergenic 25.0%
! ATATCATATATGTCTAACAG+AGG - chr1_2:2092412-2092431 None:intergenic 25.0%
! TATCGATGTTCATTATGTTA+TGG + chr1_2:2092466-2092485 Msa0048990:intron 25.0%
!! GTTTTTACTTGTCATGAAAA+TGG + chr1_2:2092648-2092667 Msa0048990:intron 25.0%
!!! ATATTTATATTTCAGGTTCG+TGG + chr1_2:2093125-2093144 Msa0048990:intron 25.0%
! ACGCATAAAAAATCTATCAT+TGG - chr1_2:2093537-2093556 None:intergenic 25.0%
!! CAGACATTTTCAAAATCAAA+AGG - chr1_2:2093641-2093660 None:intergenic 25.0%
!! AGGTTATAATGAGTTCTTTT+TGG - chr1_2:2093675-2093694 None:intergenic 25.0%
!! TAGCAAACTTTAGGTATTTT+AGG + chr1_2:2094215-2094234 Msa0048990:intron 25.0%
!! TTCCTTAATACTGTATTTTC+TGG + chr1_2:2094343-2094362 Msa0048990:intron 25.0%
! TTGTCTAAATCTCTGATATT+AGG + chr1_2:2094556-2094575 Msa0048990:intron 25.0%
! AATAGAAAATCTTCCAAATC+AGG - chr1_2:2094736-2094755 None:intergenic 25.0%
! AAAGAAAAATTGTCACTACT+GGG - chr1_2:2094777-2094796 None:intergenic 25.0%
! AAAAGAAAAATTGTCACTAC+TGG - chr1_2:2094778-2094797 None:intergenic 25.0%
!! TAGTGACAATTTTTCTTTTC+TGG + chr1_2:2094779-2094798 Msa0048990:intron 25.0%
!!! ACAATTTTTCTTTTCTGGTT+GGG + chr1_2:2094784-2094803 Msa0048990:intron 25.0%
! AATCGGCATATACAATATTA+AGG + chr1_2:2094916-2094935 Msa0048990:CDS 25.0%
! TAAGGTACATCAGTATATAT+TGG + chr1_2:2094934-2094953 Msa0048990:intron 25.0%
! AAGGTACATCAGTATATATT+GGG + chr1_2:2094935-2094954 Msa0048990:intron 25.0%
!!! CATTTTGAAACTAATTAGCA+AGG + chr1_2:2095024-2095043 Msa0048990:intron 25.0%
!! TACGAGATGGAATATAATTT+TGG - chr1_2:2095379-2095398 None:intergenic 25.0%
!!! CAAGAATTTTATTTACGAGA+TGG - chr1_2:2095392-2095411 None:intergenic 25.0%
! CATCTCGTAAATAAAATTCT+TGG + chr1_2:2095390-2095409 Msa0048990:intron 25.0%
! TGTCTACTAAAAGATTATGA+AGG - chr1_2:2095567-2095586 None:intergenic 25.0%
! AAACTGATTGATAAGATTTG+AGG - chr1_2:2095618-2095637 None:intergenic 25.0%
!! AGATTTGGTTTCTGATAATT+TGG + chr1_2:2096007-2096026 Msa0048990:intron 25.0%
!!! GACTTGCTATTAGATATTTT+GGG + chr1_2:2096087-2096106 Msa0048990:intron 25.0%
! AAACCTGGAAAATTACAAAT+GGG - chr1_2:2096332-2096351 None:intergenic 25.0%
! TAAACCTGGAAAATTACAAA+TGG - chr1_2:2096333-2096352 None:intergenic 25.0%
!! TGAAGCCAATAATTTCTTTT+TGG + chr1_2:2096781-2096800 Msa0048990:CDS 25.0%
! GTTGTCCAAAAAGAAATTAT+TGG - chr1_2:2096789-2096808 None:intergenic 25.0%
!! ATAATTTCTTTTTGGACAAC+GGG + chr1_2:2096789-2096808 Msa0048990:CDS 25.0%
! ATATCAACTACCTTTAAGTA+TGG - chr1_2:2097124-2097143 None:intergenic 25.0%
!!! GAAATTTTAAAAGAAGCCTA+GGG - chr1_2:2097479-2097498 None:intergenic 25.0%
!!! AGAAATTTTAAAAGAAGCCT+AGG - chr1_2:2097480-2097499 None:intergenic 25.0%
! TGTTAATGCATAATATATGC+AGG + chr1_2:2097500-2097519 Msa0048990:intron 25.0%
! GTTAATGCATAATATATGCA+GGG + chr1_2:2097501-2097520 Msa0048990:intron 25.0%
! TTAATGCATAATATATGCAG+GGG + chr1_2:2097502-2097521 Msa0048990:intron 25.0%
!!! TGTTTTAATTTACTGCATCT+TGG + chr1_2:2097633-2097652 Msa0048990:intron 25.0%
! ACCTTAGTTAATAGGTATTT+GGG - chr1_2:2097853-2097872 None:intergenic 25.0%
! AACCTTAGTTAATAGGTATT+TGG - chr1_2:2097854-2097873 None:intergenic 25.0%
!! TAAAAATTTAATTTCCCACC+AGG + chr1_2:2097924-2097943 Msa0048990:intron 25.0%
!!! GTCATAAAGTTTTATGCAAT+GGG - chr1_2:2097952-2097971 None:intergenic 25.0%
!! TTTGTTGATAGGATCAATTA+GGG - chr1_2:2099007-2099026 None:intergenic 25.0%
! TAGTTTACAATGTAGTCAAA+AGG - chr1_2:2099044-2099063 None:intergenic 25.0%
!!! ACTAAGTAAAGTTCTAGTTT+TGG - chr1_2:2099163-2099182 None:intergenic 25.0%
! AACTTTACTTAGTATAATCC+AGG + chr1_2:2099170-2099189 Msa0048990:intron 25.0%
!!! GGACAATTTTTTTGATTATC+AGG + chr1_2:2099205-2099224 Msa0048990:intron 25.0%
! CAGTTGTAAAGCTATAAAAT+TGG - chr1_2:2099522-2099541 None:intergenic 25.0%
! ACTGACAACTATATATTGTT+AGG + chr1_2:2099538-2099557 Msa0048990:intron 25.0%
!!! AATGGAGTATCTAAAACTTT+TGG + chr1_2:2099685-2099704 Msa0048990:CDS 25.0%
!!! ATGGAGTATCTAAAACTTTT+GGG + chr1_2:2099686-2099705 Msa0048990:CDS 25.0%
! GACATGGTTAAAAAAAATAG+AGG + chr1_2:2099800-2099819 Msa0048990:intron 25.0%
! ATAATTGGTGAAGATATTGT+CGG + chr1_2:2100055-2100074 Msa0048990:intron 25.0%
! TGAACATTACTAATAACTAG+TGG + chr1_2:2100125-2100144 Msa0048990:intron 25.0%
! GAACATTACTAATAACTAGT+GGG + chr1_2:2100126-2100145 Msa0048990:intron 25.0%
!! AAGGATTTGGTAAAATTACA+CGG - chr1_2:2100172-2100191 None:intergenic 25.0%
!! TAATTTTACCAAATCCTTTC+TGG + chr1_2:2100174-2100193 Msa0048990:intron 25.0%
!! TAGCTGATTTCATAACAAAA+TGG - chr1_2:2100368-2100387 None:intergenic 25.0%
! TTTGAAAATTCTCAATCACA+CGG + chr1_2:2100485-2100504 Msa0048990:CDS 25.0%
! AATGCTAAAGAACAAAGTAA+AGG - chr1_2:2100567-2100586 None:intergenic 25.0%
!! TGTTCTTTAGCATTTTCTTT+TGG + chr1_2:2100573-2100592 Msa0048990:intron 25.0%
!! CTATACCTTTTAATATCTGT+TGG + chr1_2:2100625-2100644 Msa0048990:intron 25.0%
! ACATATCTATTATCATATGG+CGG - chr1_2:2100736-2100755 None:intergenic 25.0%
!!! ATCAGGATTTTAGGTATAAT+CGG + chr1_2:2100994-2101013 Msa0048990:intron 25.0%
!!! ATTTTAGGTATAATCGGTAA+AGG + chr1_2:2101000-2101019 Msa0048990:intron 25.0%
!!! TTTTAGGTATAATCGGTAAA+GGG + chr1_2:2101001-2101020 Msa0048990:intron 25.0%
! AGCATTTCAAGAGTAATATA+AGG - chr1_2:2101129-2101148 None:intergenic 25.0%
! ATAAGTCTCAAACAAAACTA+GGG + chr1_2:2101312-2101331 Msa0048990:intron 25.0%
!!! GTTTTGATTTTCAGTATAGA+GGG - chr1_2:2101537-2101556 None:intergenic 25.0%
!!! TGTTTTGATTTTCAGTATAG+AGG - chr1_2:2101538-2101557 None:intergenic 25.0%
! ATCAAAACATGCTACAAATT+AGG + chr1_2:2101549-2101568 Msa0048990:intron 25.0%
! GCTTAGAAAAAAGTGAAAAT+AGG + chr1_2:2101695-2101714 Msa0048990:intron 25.0%
!!! TTAGTTGATGTTTTCTTTAG+GGG - chr1_2:2101996-2102015 None:intergenic 25.0%
! AGAATTGTTTCAAAGAAAAG+TGG + chr1_2:2102054-2102073 Msa0048990:intron 25.0%
! GAATTGTTTCAAAGAAAAGT+GGG + chr1_2:2102055-2102074 Msa0048990:intron 25.0%
!!! GTATTCGCAAAATCTTATTT+TGG - chr1_2:2102096-2102115 None:intergenic 25.0%
! ATCACAAAATCGTTAGATTT+AGG + chr1_2:2102140-2102159 Msa0048990:intron 25.0%
! AATATGCATCAGATGAAATT+TGG - chr1_2:2102257-2102276 None:intergenic 25.0%
!! TTTCTCTTCTAAAAACTCTT+CGG + chr1_2:2102277-2102296 Msa0048990:intron 25.0%
! GGATTGAAGATTAAAGAAAT+AGG - chr1_2:2102867-2102886 None:intergenic 25.0%
!!! ATTGTTGTTTGTCTGAAATA+CGG - chr1_2:2103100-2103119 None:intergenic 25.0%
!!! TCCTTTACTTTTTTTTGAAG+AGG + chr1_2:2103507-2103526 Msa0048990:intron 25.0%
! ACCTCTTCAAAAAAAAGTAA+AGG - chr1_2:2103511-2103530 None:intergenic 25.0%
!! TGTTACTCAAAATAGTTTTC+AGG + chr1_2:2104204-2104223 Msa0048990:three_prime_UTR 25.0%
! AACACTTCTATTACAAATGT+TGG - chr1_2:2104266-2104285 None:intergenic 25.0%
! TGCTACATTATTCAATTGTT+TGG - chr1_2:2104456-2104475 None:intergenic 25.0%
! TACAGCTTCAAGAATTTAAA+TGG - chr1_2:2104496-2104515 None:intergenic 25.0%
! TCTTTCTGCGTTTTTAATAG+TGG - chr1_2:2091112-2091131 None:intergenic 30.0%
! CTGAGAAATTCGAATTGTTT+TGG - chr1_2:2091237-2091256 None:intergenic 30.0%
TCGATGGGAATATTGATATT+TGG + chr1_2:2091603-2091622 Msa0048990:CDS 30.0%
! GATGATTTTGTGTGCTTTTA+TGG + chr1_2:2091701-2091720 Msa0048990:intron 30.0%
! TTAGTTGAAATGTTTTTCCG+AGG + chr1_2:2091837-2091856 Msa0048990:intron 30.0%
! TTTCTGAGTCTGAAGAATTT+TGG + chr1_2:2092079-2092098 Msa0048990:intron 30.0%
AACTTAATAGCTATGAAGCA+TGG + chr1_2:2092200-2092219 Msa0048990:intron 30.0%
TATAACGTAATCACATGTGT+TGG + chr1_2:2092279-2092298 Msa0048990:intron 30.0%
!! CATCGATAAAAAGCACTATA+CGG - chr1_2:2092454-2092473 None:intergenic 30.0%
CTGAGAACATTTATCAGAAA+AGG - chr1_2:2092950-2092969 None:intergenic 30.0%
AAAATGAAAGTTCTCTCGTT+GGG + chr1_2:2092978-2092997 Msa0048990:CDS 30.0%
!!! CTTGATTGTTCTTTGTTTTC+TGG + chr1_2:2093063-2093082 Msa0048990:intron 30.0%
TGAAATTTGCATATGGGATT+TGG + chr1_2:2093202-2093221 Msa0048990:CDS 30.0%
! TTTAATGGTGGAAAATGTGT+AGG - chr1_2:2093242-2093261 None:intergenic 30.0%
! TACACATTTTCCACCATTAA+AGG + chr1_2:2093241-2093260 Msa0048990:CDS 30.0%
AAAAAGTCTCTGACCTTTAA+TGG - chr1_2:2093257-2093276 None:intergenic 30.0%
CCATATTAATCCATCAAAAG+AGG - chr1_2:2093313-2093332 None:intergenic 30.0%
!!! CCTCTTTTGATGGATTAATA+TGG + chr1_2:2093310-2093329 Msa0048990:intron 30.0%
GTGAAGTTTCATTCTTATCT+TGG + chr1_2:2093399-2093418 Msa0048990:CDS 30.0%
!!! ATTTTGGTTTTATTCTCCAG+TGG + chr1_2:2093562-2093581 Msa0048990:intron 30.0%
!!! TCACTGACTTTTGTTTCTTT+AGG - chr1_2:2093595-2093614 None:intergenic 30.0%
AGAAACAAAAGTCAGTGATA+AGG + chr1_2:2093597-2093616 Msa0048990:CDS 30.0%
!! TTTTCAATGGATTTGTGGAA+GGG - chr1_2:2094056-2094075 None:intergenic 30.0%
!! ATTTTCAATGGATTTGTGGA+AGG - chr1_2:2094057-2094076 None:intergenic 30.0%
TATGCAATTCGCACAAAATA+GGG - chr1_2:2094125-2094144 None:intergenic 30.0%
ATATGCAATTCGCACAAAAT+AGG - chr1_2:2094126-2094145 None:intergenic 30.0%
!!! TTTTAGGATGTTACATTGCT+TGG + chr1_2:2094231-2094250 Msa0048990:intron 30.0%
AGCCAGAAAATACAGTATTA+AGG - chr1_2:2094348-2094367 None:intergenic 30.0%
AGCAAATAAGAGCTATCATT+GGG - chr1_2:2094604-2094623 None:intergenic 30.0%
AAGCAAATAAGAGCTATCAT+TGG - chr1_2:2094605-2094624 None:intergenic 30.0%
AATGTGAAAGCAGTAAAAGA+AGG - chr1_2:2094690-2094709 None:intergenic 30.0%
AATTTCAAAGTTGCCTGATT+TGG + chr1_2:2094720-2094739 Msa0048990:intron 30.0%
!! GACAATTTTTCTTTTCTGGT+TGG + chr1_2:2094783-2094802 Msa0048990:intron 30.0%
!!! CAATTTTTCTTTTCTGGTTG+GGG + chr1_2:2094785-2094804 Msa0048990:intron 30.0%
!!! AATTTTTCTTTTCTGGTTGG+GGG + chr1_2:2094786-2094805 Msa0048990:intron 30.0%
!! ATTGGTATTCTAAGATACCT+GGG + chr1_2:2094864-2094883 Msa0048990:CDS 30.0%
AGGTACATCAGTATATATTG+GGG + chr1_2:2094936-2094955 Msa0048990:intron 30.0%
!!! ATTGGGGTTTTTTTGTTTGT+TGG + chr1_2:2094952-2094971 Msa0048990:intron 30.0%
!! TTTTTGTTTGTTGGTGAGAT+TGG + chr1_2:2094961-2094980 Msa0048990:intron 30.0%
ACGACTGAAATGATAAAGAT+GGG - chr1_2:2095300-2095319 None:intergenic 30.0%
GTCAAATGTCGGTAATTAAA+GGG - chr1_2:2095433-2095452 None:intergenic 30.0%
AGTCAAATGTCGGTAATTAA+AGG - chr1_2:2095434-2095453 None:intergenic 30.0%
TCCAGTTTATAGTCAAATGT+CGG - chr1_2:2095444-2095463 None:intergenic 30.0%
CAAAACTGAGACAGAATTTA+AGG - chr1_2:2095492-2095511 None:intergenic 30.0%
! TCAGTTTTCATGTATAGACT+TGG + chr1_2:2095631-2095650 Msa0048990:intron 30.0%
TAACATATGTGATTATCTGC+AGG + chr1_2:2095845-2095864 Msa0048990:CDS 30.0%
AACATATGTGATTATCTGCA+GGG + chr1_2:2095846-2095865 Msa0048990:CDS 30.0%
! TTTGGTTTCTGATAATTTGG+TGG + chr1_2:2096010-2096029 Msa0048990:intron 30.0%
!!! CGACTTGCTATTAGATATTT+TGG + chr1_2:2096086-2096105 Msa0048990:intron 30.0%
!! CGATTTTATTTCTTTGTCCA+TGG + chr1_2:2096280-2096299 Msa0048990:intron 30.0%
TCTATGTGATAAAAAGTCTC+AGG + chr1_2:2096446-2096465 Msa0048990:CDS 30.0%
!! CTGAGTGCTTTTTATTGTTA+TGG + chr1_2:2096551-2096570 Msa0048990:intron 30.0%
AAGGTTATGTTTGAAGATGA+TGG + chr1_2:2096611-2096630 Msa0048990:CDS 30.0%
! ACTATGTCTTTTTCTTCACT+AGG - chr1_2:2096680-2096699 None:intergenic 30.0%
! TAATTTCTTTTTGGACAACG+GGG + chr1_2:2096790-2096809 Msa0048990:CDS 30.0%
AATGCATATCTGCTGATAAA+TGG + chr1_2:2097014-2097033 Msa0048990:CDS 30.0%
ATGCATATCTGCTGATAAAT+GGG + chr1_2:2097015-2097034 Msa0048990:CDS 30.0%
GAATTTGACAGAATTGTTGT+TGG - chr1_2:2097178-2097197 None:intergenic 30.0%
! TTGTAAATCTCTTCCTTTTG+CGG + chr1_2:2097215-2097234 Msa0048990:intron 30.0%
AAATAGAAATGAACCGCAAA+AGG - chr1_2:2097231-2097250 None:intergenic 30.0%
! GTTTCTTTCCAGAATTTTAG+AGG - chr1_2:2097309-2097328 None:intergenic 30.0%
! TTCAGGTCTTTTAAACACAT+GGG - chr1_2:2097728-2097747 None:intergenic 30.0%
ATTAATTAAGCAAGTTGCCT+AGG - chr1_2:2097805-2097824 None:intergenic 30.0%
TCCCAAATACCTATTAACTA+AGG + chr1_2:2097849-2097868 Msa0048990:intron 30.0%
GATAGGTAACCTTAGTTAAT+AGG - chr1_2:2097861-2097880 None:intergenic 30.0%
! TTTTTATATTGCTCACCTTG+AGG - chr1_2:2097910-2097929 None:intergenic 30.0%
!! GGTCATAAAGTTTTATGCAA+TGG - chr1_2:2097953-2097972 None:intergenic 30.0%
GGTCAACTTAAATGATATCA+AGG - chr1_2:2097974-2097993 None:intergenic 30.0%
!! ATATCATTTAAGTTGACCCA+TGG + chr1_2:2097976-2097995 Msa0048990:intron 30.0%
!!! TCTTTGTTTTTCCTCTGTTA+TGG + chr1_2:2098437-2098456 Msa0048990:intron 30.0%
!!! CTTTGTTTTTCCTCTGTTAT+GGG + chr1_2:2098438-2098457 Msa0048990:intron 30.0%
AGAAAAAGAATCAAAGGATG+CGG - chr1_2:2098593-2098612 None:intergenic 30.0%
TTGAATACATTGGAGTTAGA+TGG - chr1_2:2098781-2098800 None:intergenic 30.0%
TCTAACTCCAATGTATTCAA+TGG + chr1_2:2098781-2098800 Msa0048990:intron 30.0%
TAATCTGCCATTGAATACAT+TGG - chr1_2:2098791-2098810 None:intergenic 30.0%
TATTCAATGGCAGATTATGA+TGG + chr1_2:2098794-2098813 Msa0048990:intron 30.0%
! GTTTGTTGATAGGATCAATT+AGG - chr1_2:2099008-2099027 None:intergenic 30.0%
CACTACTTCAATATGCAAAT+TGG - chr1_2:2099073-2099092 None:intergenic 30.0%
! GTATGCTTTATCTTCTGTTT+TGG + chr1_2:2099119-2099138 Msa0048990:intron 30.0%
!! CTTCTGTTTTGGATTTAGAT+TGG + chr1_2:2099130-2099149 Msa0048990:intron 30.0%
TCAAAAAAATTGTCCCATTG+TGG - chr1_2:2099200-2099219 None:intergenic 30.0%
! ACACTTTGTTATATATGTGC+TGG + chr1_2:2099356-2099375 Msa0048990:CDS 30.0%
AAACTGTTGAAATTTGGTCA+AGG + chr1_2:2099390-2099409 Msa0048990:CDS 30.0%
ATCTTATGTTGATCTTCTTC+AGG + chr1_2:2099439-2099458 Msa0048990:CDS 30.0%
AAAAACTATTGTTCTTGCCT+TGG + chr1_2:2099571-2099590 Msa0048990:CDS 30.0%
!! CTGAAATTTTAGCAAGTCAA+GGG + chr1_2:2099648-2099667 Msa0048990:CDS 30.0%
! AACTGAACTTGTGATTTTGA+AGG + chr1_2:2099724-2099743 Msa0048990:CDS 30.0%
!! GAAACTGGTAAACTTTTTCT+TGG + chr1_2:2099767-2099786 Msa0048990:intron 30.0%
AAAACAAAGGGAAAATGGTT+AGG - chr1_2:2099994-2100013 None:intergenic 30.0%
CCATAAAAACAAAGGGAAAA+TGG - chr1_2:2099999-2100018 None:intergenic 30.0%
!!! CCATTTTCCCTTTGTTTTTA+TGG + chr1_2:2099996-2100015 Msa0048990:intron 30.0%
CCTTACTCCATAAAAACAAA+GGG - chr1_2:2100006-2100025 None:intergenic 30.0%
!!! CCTTTGTTTTTATGGAGTAA+GGG + chr1_2:2100004-2100023 Msa0048990:intron 30.0%
ACTATAAAACTTTGCCAGAA+AGG - chr1_2:2100191-2100210 None:intergenic 30.0%
TCTCTCCAGATATATTCATT+TGG + chr1_2:2100261-2100280 Msa0048990:intron 30.0%
! ATTGGAGAAGTATATGTTCA+TGG + chr1_2:2100321-2100340 Msa0048990:intron 30.0%
TTCTTTCCCTGTTCTATTTA+TGG + chr1_2:2100433-2100452 Msa0048990:intron 30.0%
! TTGAGAATTTTCAAAAGCAG+TGG - chr1_2:2100480-2100499 None:intergenic 30.0%
! CTGGTAATGATTCACATAAT+TGG - chr1_2:2100537-2100556 None:intergenic 30.0%
CAATTATGTGAATCATTACC+AGG + chr1_2:2100535-2100554 Msa0048990:CDS 30.0%
! CTTTTAATATCTGTTGGTCA+GGG + chr1_2:2100631-2100650 Msa0048990:intron 30.0%
GGCACATATCTATTATCATA+TGG - chr1_2:2100739-2100758 None:intergenic 30.0%
TATGATAATAGATATGTGCC+TGG + chr1_2:2100739-2100758 Msa0048990:CDS 30.0%
AACAAATATATTGGGCTGTT+GGG - chr1_2:2100794-2100813 None:intergenic 30.0%
!! GGTGATGGAACAAATATATT+GGG - chr1_2:2100802-2100821 None:intergenic 30.0%
! ATGATATGATAATGTACCTG+AGG - chr1_2:2100844-2100863 None:intergenic 30.0%
ATATGTGCATGATATTCACA+AGG + chr1_2:2100889-2100908 Msa0048990:intron 30.0%
! GTAGTCAAAATCAGGATTTT+AGG + chr1_2:2100985-2101004 Msa0048990:intron 30.0%
AGAGTCATTACATTAATCGT+AGG + chr1_2:2101042-2101061 Msa0048990:intron 30.0%
CATAAGTCTCAAACAAAACT+AGG + chr1_2:2101311-2101330 Msa0048990:intron 30.0%
TAAGTCTCAAACAAAACTAG+GGG + chr1_2:2101313-2101332 Msa0048990:intron 30.0%
!!! TATTTTTGGGTTTTTCCAGT+GGG - chr1_2:2101359-2101378 None:intergenic 30.0%
!!! TTATTTTTGGGTTTTTCCAG+TGG - chr1_2:2101360-2101379 None:intergenic 30.0%
!!! CGACTCTACTTGTTATTTTT+GGG - chr1_2:2101372-2101391 None:intergenic 30.0%
CCAAAAATAACAAGTAGAGT+CGG + chr1_2:2101370-2101389 Msa0048990:intron 30.0%
CAAAAATAACAAGTAGAGTC+GGG + chr1_2:2101371-2101390 Msa0048990:intron 30.0%
AAACCTTTGGTATTCTTCTT+TGG - chr1_2:2101470-2101489 None:intergenic 30.0%
! AAGAAGAATACCAAAGGTTT+TGG + chr1_2:2101470-2101489 Msa0048990:intron 30.0%
!!! TCAGTTTTGAAAATGGACTT+GGG - chr1_2:2101502-2101521 None:intergenic 30.0%
!!! ATGCAATTTTAGTTTGTTGC+AGG + chr1_2:2101617-2101636 Msa0048990:intron 30.0%
! TTGTTGCAGGTATTTTATGA+TGG + chr1_2:2101630-2101649 Msa0048990:intron 30.0%
!! ATTAGTGGGTATTCTGAAAT+CGG + chr1_2:2101865-2101884 Msa0048990:intron 30.0%
TTGAAACAATTCTGCGATTA+TGG - chr1_2:2102047-2102066 None:intergenic 30.0%
!!! TTCGCAAAATCTTATTTTGG+TGG - chr1_2:2102093-2102112 None:intergenic 30.0%
TACTTACCCTCAACAATAAT+CGG - chr1_2:2102118-2102137 None:intergenic 30.0%
AAGTTAACACAACAAGTACA+TGG - chr1_2:2102512-2102531 None:intergenic 30.0%
!!! GCTTTATTTTTGTTGTTGGA+AGG + chr1_2:2102630-2102649 Msa0048990:intron 30.0%
!! GTCATTTTATAAACTGCATC+TGG - chr1_2:2103074-2103093 None:intergenic 30.0%
!!! TTCCTTTACTGATTCTCTTT+TGG + chr1_2:2103537-2103556 Msa0048990:intron 30.0%
AACCAAAAGAGAATCAGTAA+AGG - chr1_2:2103542-2103561 None:intergenic 30.0%
TTGACTTACCTGAATTTGAA+GGG - chr1_2:2103814-2103833 None:intergenic 30.0%
! ATTGACTTACCTGAATTTGA+AGG - chr1_2:2103815-2103834 None:intergenic 30.0%
!!! TGATACTGTTTTGCTGATTT+TGG + chr1_2:2104019-2104038 Msa0048990:three_prime_UTR 30.0%
TGGAAAATTGGGAATGAAAG+TGG - chr1_2:2091262-2091281 None:intergenic 35.0%
AGAGAATCGGAAACCTAATT+AGG - chr1_2:2091308-2091327 None:intergenic 35.0%
TTAGGTTTCCGATTCTCTAA+TGG + chr1_2:2091310-2091329 Msa0048990:exon 35.0%
TATCAAAGGGGTTAATCGAT+CGG + chr1_2:2091337-2091356 Msa0048990:CDS 35.0%
! ATCGGTTTAATCGTCTTTCT+TGG + chr1_2:2091522-2091541 Msa0048990:CDS 35.0%
TCGGTTTAATCGTCTTTCTT+GGG + chr1_2:2091523-2091542 Msa0048990:CDS 35.0%
!!! ATGGTTACGATGTTTTTTCG+AGG + chr1_2:2091744-2091763 Msa0048990:intron 35.0%
!! TAAAGATCGACTTGTATCCT+CGG - chr1_2:2091857-2091876 None:intergenic 35.0%
!! ATAGAAGTGCTGATTCTCTA+CGG - chr1_2:2091904-2091923 None:intergenic 35.0%
GTCTAACAGAGGGTTTAATT+AGG - chr1_2:2092401-2092420 None:intergenic 35.0%
ATGAAAATGGAGAAACACAG+TGG + chr1_2:2092661-2092680 Msa0048990:intron 35.0%
CAACAACTTTGAGCAAACTA+AGG - chr1_2:2092736-2092755 None:intergenic 35.0%
TCTGATAAATGTTCTCAGCT+CGG + chr1_2:2092952-2092971 Msa0048990:intron 35.0%
GAAAATGAAAGTTCTCTCGT+TGG + chr1_2:2092977-2092996 Msa0048990:CDS 35.0%
TAAAAGCAGAGAGAACATAC+CGG - chr1_2:2093025-2093044 None:intergenic 35.0%
AGGATGGTGAAATTTGCATA+TGG + chr1_2:2093195-2093214 Msa0048990:CDS 35.0%
GGATGGTGAAATTTGCATAT+GGG + chr1_2:2093196-2093215 Msa0048990:CDS 35.0%
TAATCCATCAAAAGAGGAGA+GGG - chr1_2:2093307-2093326 None:intergenic 35.0%
TTAATCCATCAAAAGAGGAG+AGG - chr1_2:2093308-2093327 None:intergenic 35.0%
AATGTTTATGATCACTGTGC+AGG + chr1_2:2093355-2093374 Msa0048990:intron 35.0%
ATGTTTATGATCACTGTGCA+GGG + chr1_2:2093356-2093375 Msa0048990:intron 35.0%
TAAGAATGAAACTTCACCCT+GGG - chr1_2:2093396-2093415 None:intergenic 35.0%
ATAAGAATGAAACTTCACCC+TGG - chr1_2:2093397-2093416 None:intergenic 35.0%
TTAGCGTCCACTTCATATAA+TGG + chr1_2:2093443-2093462 Msa0048990:CDS 35.0%
TAGCGTCCACTTCATATAAT+GGG + chr1_2:2093444-2093463 Msa0048990:CDS 35.0%
AGATGGATCTCCTTCTATAA+AGG + chr1_2:2093801-2093820 Msa0048990:CDS 35.0%
AGCGACTATACCTTTATAGA+AGG - chr1_2:2093814-2093833 None:intergenic 35.0%
GAATACAATGACACCAGTAA+AGG + chr1_2:2093910-2093929 Msa0048990:CDS 35.0%
TTGTATATTACATGGGCATG+AGG + chr1_2:2094189-2094208 Msa0048990:intron 35.0%
TGTATATTACATGGGCATGA+GGG + chr1_2:2094190-2094209 Msa0048990:intron 35.0%
TTAAGGAAGAGAACACCATA+GGG - chr1_2:2094331-2094350 None:intergenic 35.0%
ATTAAGGAAGAGAACACCAT+AGG - chr1_2:2094332-2094351 None:intergenic 35.0%
AGATAAACTTAAAGCAGTGG+TGG - chr1_2:2094524-2094543 None:intergenic 35.0%
GTCAGATAAACTTAAAGCAG+TGG - chr1_2:2094527-2094546 None:intergenic 35.0%
TAGGAGTAATTGCAATGTCA+TGG + chr1_2:2094575-2094594 Msa0048990:intron 35.0%
! AGCTCTTATTTGCTTACTTG+TGG + chr1_2:2094610-2094629 Msa0048990:CDS 35.0%
!! CATTGGTATTCTAAGATACC+TGG + chr1_2:2094863-2094882 Msa0048990:CDS 35.0%
!! TTGGTATTCTAAGATACCTG+GGG + chr1_2:2094865-2094884 Msa0048990:CDS 35.0%
TCCTCCTTTGATGGAAAAAT+CGG + chr1_2:2094899-2094918 Msa0048990:CDS 35.0%
!!! TATGCCGATTTTTCCATCAA+AGG - chr1_2:2094906-2094925 None:intergenic 35.0%
AGCTGAAGTAGTCTCATAAA+GGG + chr1_2:2095161-2095180 Msa0048990:intron 35.0%
CTGAAATGATAAAGATGGGA+TGG - chr1_2:2095296-2095315 None:intergenic 35.0%
CACGACTGAAATGATAAAGA+TGG - chr1_2:2095301-2095320 None:intergenic 35.0%
ACCGACATTTGACTATAAAC+TGG + chr1_2:2095440-2095459 Msa0048990:intron 35.0%
GACAGAATTTAAGGAACACT+TGG - chr1_2:2095483-2095502 None:intergenic 35.0%
TGCTCAGTCTATGTTAGATT+TGG + chr1_2:2095992-2096011 Msa0048990:intron 35.0%
! ACAGGACGTTTATACCATTT+TGG - chr1_2:2096158-2096177 None:intergenic 35.0%
AAATGGTATAAACGTCCTGT+TGG + chr1_2:2096158-2096177 Msa0048990:CDS 35.0%
!! AAACTTGTGTCATTTCATCC+TGG + chr1_2:2096203-2096222 Msa0048990:intron 35.0%
ACTGAAAGGTTAAAAGACCA+TGG - chr1_2:2096300-2096319 None:intergenic 35.0%
ATGGGATGAATTCAACTGAA+AGG - chr1_2:2096314-2096333 None:intergenic 35.0%
! CATCCCATTTGTAATTTTCC+AGG + chr1_2:2096326-2096345 Msa0048990:CDS 35.0%
! TTTGAAGCTGCGATACAAAA+TGG + chr1_2:2096402-2096421 Msa0048990:CDS 35.0%
TTGAAGCTGCGATACAAAAT+GGG + chr1_2:2096403-2096422 Msa0048990:CDS 35.0%
TTATTGTTATGGCAGATCTG+AGG + chr1_2:2096562-2096581 Msa0048990:intron 35.0%
AGTTAATGATGATCTTTCCC+AGG + chr1_2:2096697-2096716 Msa0048990:CDS 35.0%
!! TCCAAGAGCATTTATTTCCT+GGG - chr1_2:2096717-2096736 None:intergenic 35.0%
AATAAATGCTCTTGGACTTG+AGG + chr1_2:2096721-2096740 Msa0048990:CDS 35.0%
ATAAATGCTCTTGGACTTGA+GGG + chr1_2:2096722-2096741 Msa0048990:CDS 35.0%
TGCTTTAGTTATTGCTCATG+TGG + chr1_2:2097042-2097061 Msa0048990:CDS 35.0%
GCTTTAGTTATTGCTCATGT+GGG + chr1_2:2097043-2097062 Msa0048990:CDS 35.0%
CTACCTTTAAGTATGGTGAT+CGG - chr1_2:2097117-2097136 None:intergenic 35.0%
! TGCGGTTCATTTCTATTTTC+AGG + chr1_2:2097233-2097252 Msa0048990:intron 35.0%
ACCTTAAAGGTGAATAAGTG+GGG - chr1_2:2097549-2097568 None:intergenic 35.0%
CACCTTAAAGGTGAATAAGT+GGG - chr1_2:2097550-2097569 None:intergenic 35.0%
TCACCTTAAAGGTGAATAAG+TGG - chr1_2:2097551-2097570 None:intergenic 35.0%
GCTAGAGAAATTCACCTTAA+AGG - chr1_2:2097562-2097581 None:intergenic 35.0%
! TTTTCCAATCCAGATTCTAG+CGG - chr1_2:2097676-2097695 None:intergenic 35.0%
! GTTCAGGTCTTTTAAACACA+TGG - chr1_2:2097729-2097748 None:intergenic 35.0%
TTAATCAATTGGGAGAGTTC+AGG - chr1_2:2097745-2097764 None:intergenic 35.0%
TGACAGAATAAAAACCAGCT+GGG - chr1_2:2098362-2098381 None:intergenic 35.0%
ATGACAGAATAAAAACCAGC+TGG - chr1_2:2098363-2098382 None:intergenic 35.0%
AAAGAAGATAACGAGAGCAA+TGG - chr1_2:2098422-2098441 None:intergenic 35.0%
CAAGGTACAGTCAAAAACAA+GGG - chr1_2:2098652-2098671 None:intergenic 35.0%
TCAAGGTACAGTCAAAAACA+AGG - chr1_2:2098653-2098672 None:intergenic 35.0%
! TACATTTACCACCTTTGAGA+AGG - chr1_2:2098715-2098734 None:intergenic 35.0%
AGGTGGTAAATGTACTAATC+TGG + chr1_2:2098721-2098740 Msa0048990:intron 35.0%
AGCCTAAAATCCACCATATA+TGG + chr1_2:2098819-2098838 Msa0048990:intron 35.0%
!!! CACCATATATGGTGGATTTT+AGG - chr1_2:2098824-2098843 None:intergenic 35.0%
CTAAAATCCACCATATATGG+TGG + chr1_2:2098822-2098841 Msa0048990:intron 35.0%
! ATTTGAGACCGCAATACAAT+AGG - chr1_2:2098926-2098945 None:intergenic 35.0%
GATAGGATCAATTAGGGAAT+TGG - chr1_2:2099001-2099020 None:intergenic 35.0%
ACACTTGCTTCAAAACTCAT+GGG + chr1_2:2099311-2099330 Msa0048990:CDS 35.0%
!! GCTGAAATTTTAGCAAGTCA+AGG + chr1_2:2099647-2099666 Msa0048990:CDS 35.0%
! TTTTAGATACTCCATTGCTG+TGG - chr1_2:2099681-2099700 None:intergenic 35.0%
TTTCTGTAGACAGTGCAATT+CGG - chr1_2:2099751-2099770 None:intergenic 35.0%
TCTTGGATTTCTATACGACA+TGG + chr1_2:2099784-2099803 Msa0048990:intron 35.0%
!!! CCCTTTGTTTTTATGGAGTA+AGG + chr1_2:2100003-2100022 Msa0048990:intron 35.0%
CCCTTACTCCATAAAAACAA+AGG - chr1_2:2100007-2100026 None:intergenic 35.0%
!! TGTTTTTATGGAGTAAGGGA+AGG + chr1_2:2100008-2100027 Msa0048990:intron 35.0%
!!! GTGAAGATATTGTCGGTTTT+AGG + chr1_2:2100062-2100081 Msa0048990:intron 35.0%
TTACTAATAACTAGTGGGAG+TGG + chr1_2:2100131-2100150 Msa0048990:intron 35.0%
AAACTTTGCCAGAAAGGATT+TGG - chr1_2:2100185-2100204 None:intergenic 35.0%
CTCCAGATATATTCATTTGG+TGG + chr1_2:2100264-2100283 Msa0048990:intron 35.0%
CTCCACCAAATGAATATATC+TGG - chr1_2:2100269-2100288 None:intergenic 35.0%
! CAGATATATTCATTTGGTGG+AGG + chr1_2:2100267-2100286 Msa0048990:intron 35.0%
TGATATGAAGGACTCTCAAT+TGG + chr1_2:2100303-2100322 Msa0048990:intron 35.0%
AGTGAAGAAATTATGGGTGT+GGG - chr1_2:2100406-2100425 None:intergenic 35.0%
AAGTGAAGAAATTATGGGTG+TGG - chr1_2:2100407-2100426 None:intergenic 35.0%
CTGCAACCATAAATAGAACA+GGG - chr1_2:2100442-2100461 None:intergenic 35.0%
TCTGCAACCATAAATAGAAC+AGG - chr1_2:2100443-2100462 None:intergenic 35.0%
GGAATTATCAGCACCATAAT+AGG - chr1_2:2100516-2100535 None:intergenic 35.0%
ACAAAGTAAAGGTAACTACC+TGG - chr1_2:2100556-2100575 None:intergenic 35.0%
TTGGTGTAAATCATAGTGTC+TGG + chr1_2:2100592-2100611 Msa0048990:intron 35.0%
CCTGACCAACAGATATTAAA+AGG - chr1_2:2100633-2100652 None:intergenic 35.0%
! CCTTTTAATATCTGTTGGTC+AGG + chr1_2:2100630-2100649 Msa0048990:intron 35.0%
AATAGATATGTGCCTGGATA+TGG + chr1_2:2100745-2100764 Msa0048990:CDS 35.0%
ACAAATATATTGGGCTGTTG+GGG - chr1_2:2100793-2100812 None:intergenic 35.0%
GAACAAATATATTGGGCTGT+TGG - chr1_2:2100795-2100814 None:intergenic 35.0%
!! CGGTGATGGAACAAATATAT+TGG - chr1_2:2100803-2100822 None:intergenic 35.0%
! ATATGATAATGTACCTGAGG+AGG - chr1_2:2100841-2100860 None:intergenic 35.0%
! ACTGTTTTCCATCAAACCAA+AGG - chr1_2:2100955-2100974 None:intergenic 35.0%
AACAAAACTAGGGGTTTACA+TGG + chr1_2:2101322-2101341 Msa0048990:intron 35.0%
ACAAAACTAGGGGTTTACAT+GGG + chr1_2:2101323-2101342 Msa0048990:intron 35.0%
!!! CCGACTCTACTTGTTATTTT+TGG - chr1_2:2101373-2101392 None:intergenic 35.0%
TGAGAAACCCATCAAAAAAC+AGG + chr1_2:2101421-2101440 Msa0048990:intron 35.0%
TTTGGTATTCTTCTTTGGTC+TGG - chr1_2:2101465-2101484 None:intergenic 35.0%
AGACCAAAGAAGAATACCAA+AGG + chr1_2:2101464-2101483 Msa0048990:intron 35.0%
TGGGTTATAACCAAAACCTT+TGG - chr1_2:2101483-2101502 None:intergenic 35.0%
!!! GTCAGTTTTGAAAATGGACT+TGG - chr1_2:2101503-2101522 None:intergenic 35.0%
!!! CACTGTGTCAGTTTTGAAAA+TGG - chr1_2:2101509-2101528 None:intergenic 35.0%
! TTGATTTTCAGTATAGAGGG+TGG - chr1_2:2101534-2101553 None:intergenic 35.0%
TCAGAATACCCACTAATTTC+CGG - chr1_2:2101862-2101881 None:intergenic 35.0%
!! TTATTTTACCTCACCCAAAC+TGG + chr1_2:2101908-2101927 Msa0048990:intron 35.0%
! CATATAGGGTTTTCCAGTTT+GGG - chr1_2:2101924-2101943 None:intergenic 35.0%
TGGAAAACCCTATATGGTTT+GGG + chr1_2:2101928-2101947 Msa0048990:intron 35.0%
!! CAAAGAAAAGTGGGTTATAC+AGG + chr1_2:2102064-2102083 Msa0048990:intron 35.0%
! CGAATACCGATTATTGTTGA+GGG + chr1_2:2102109-2102128 Msa0048990:intron 35.0%
ACTCTTCGGCTAAATTAGTT+CGG + chr1_2:2102291-2102310 Msa0048990:intron 35.0%
TTAGAGTGTGAAAGTTGTCT+CGG + chr1_2:2102352-2102371 Msa0048990:intron 35.0%
TAACTTCGACTCTGAATGTT+TGG + chr1_2:2102526-2102545 Msa0048990:intron 35.0%
!!! CTGAATGTTTGGTTTTGAAG+TGG + chr1_2:2102537-2102556 Msa0048990:intron 35.0%
CAGTGGCGTTCATATTATTT+GGG + chr1_2:2102593-2102612 Msa0048990:intron 35.0%
TGAGTGACTTAAAGAACAGT+TGG + chr1_2:2102780-2102799 Msa0048990:intron 35.0%
!! AACAGTTGGTTTGAGTGATT+TGG + chr1_2:2102794-2102813 Msa0048990:intron 35.0%
AGTTTGACTGGAAGAAAGAA+AGG - chr1_2:2102888-2102907 None:intergenic 35.0%
AAGTATTTGGGAAGTTTGAC+TGG - chr1_2:2102900-2102919 None:intergenic 35.0%
TCAAACTTCCCAAATACTTC+CGG + chr1_2:2102901-2102920 Msa0048990:CDS 35.0%
TCTGGATTTCTAATCAAAGC+AGG - chr1_2:2102964-2102983 None:intergenic 35.0%
TACAATTGAGAACCCAATGT+TGG - chr1_2:2103000-2103019 None:intergenic 35.0%
! AATCCAATTGGATTTGAGGT+AGG - chr1_2:2103216-2103235 None:intergenic 35.0%
CATGAATCCAATTGGATTTG+AGG - chr1_2:2103220-2103239 None:intergenic 35.0%
! AAGGCTTTTCAATGAGACAT+CGG + chr1_2:2103617-2103636 Msa0048990:CDS 35.0%
!!! GAGCTTATCAGAAGCATTTT+TGG - chr1_2:2103748-2103767 None:intergenic 35.0%
! CTGTTTTACTTATGTGTTGC+AGG + chr1_2:2103893-2103912 Msa0048990:intron 35.0%
TTCATCTGACTACTACTGAA+TGG + chr1_2:2103916-2103935 Msa0048990:CDS 35.0%
TCATCTGACTACTACTGAAT+GGG + chr1_2:2103917-2103936 Msa0048990:CDS 35.0%
CTTGAAGCTGTACGTTATAT+AGG + chr1_2:2104504-2104523 Msa0048990:three_prime_UTR 35.0%
TATAGGCTTATCACGTCAAT+AGG + chr1_2:2104521-2104540 Msa0048990:three_prime_UTR 35.0%
ATAGGCTTATCACGTCAATA+GGG + chr1_2:2104522-2104541 Msa0048990:three_prime_UTR 35.0%
CGAGAAAGAAAAAGAGAGAG+TGG + chr1_2:2091167-2091186 Msa0048990:five_prime_UTR 40.0%
GATACACGCCATTAGAGAAT+CGG - chr1_2:2091321-2091340 None:intergenic 40.0%
TCTCTAATGGCGTGTATCAA+AGG + chr1_2:2091323-2091342 Msa0048990:exon 40.0%
CTCTAATGGCGTGTATCAAA+GGG + chr1_2:2091324-2091343 Msa0048990:exon 40.0%
TCTAATGGCGTGTATCAAAG+GGG + chr1_2:2091325-2091344 Msa0048990:exon 40.0%
AAGAGGCAATTCAGGATCAT+CGG - chr1_2:2091480-2091499 None:intergenic 40.0%
GATTAAACCGATCAGAGCTA+GGG - chr1_2:2091514-2091533 None:intergenic 40.0%
CGGTTTAATCGTCTTTCTTG+GGG + chr1_2:2091524-2091543 Msa0048990:CDS 40.0%
GGTTTAATCGTCTTTCTTGG+GGG + chr1_2:2091525-2091544 Msa0048990:CDS 40.0%
! TCGTCTGAAGATTTCGCTTT+TGG + chr1_2:2091560-2091579 Msa0048990:CDS 40.0%
AATTACCGAATCAGAGCAAG+AGG - chr1_2:2091632-2091651 None:intergenic 40.0%
!! GAGGATATGAGTTGATCTTG+CGG + chr1_2:2091763-2091782 Msa0048990:intron 40.0%
GTCATACACTGACACATGTT+TGG + chr1_2:2092320-2092339 Msa0048990:intron 40.0%
TGTCTCACAAACTAGAAGCT+AGG - chr1_2:2092539-2092558 None:intergenic 40.0%
AAGAACAATCAAGACTCAGC+AGG - chr1_2:2093056-2093075 None:intergenic 40.0%
CACCTAATCTTCTTGCATCT+GGG + chr1_2:2093168-2093187 Msa0048990:CDS 40.0%
ACCTAATCTTCTTGCATCTG+GGG + chr1_2:2093169-2093188 Msa0048990:CDS 40.0%
!! ATGTGTAGGCTCTAAAGGAT+TGG - chr1_2:2093228-2093247 None:intergenic 40.0%
! GGAAAATGTGTAGGCTCTAA+AGG - chr1_2:2093233-2093252 None:intergenic 40.0%
AAGTCTCTGACCTTTAATGG+TGG - chr1_2:2093254-2093273 None:intergenic 40.0%
AGTGGTCCCATTATATGAAG+TGG - chr1_2:2093453-2093472 None:intergenic 40.0%
! ACTTCATATAATGGGACCAC+TGG + chr1_2:2093452-2093471 Msa0048990:CDS 40.0%
!! GTTTTATTCTCCAGTGGTCT+GGG + chr1_2:2093568-2093587 Msa0048990:intron 40.0%
AATTGGATCTACAACGCTGT+CGG - chr1_2:2093713-2093732 None:intergenic 40.0%
GCGTTGTAGATCCAATTAGA+CGG + chr1_2:2093716-2093735 Msa0048990:intron 40.0%
TTGTAGATCCAATTAGACGG+CGG + chr1_2:2093719-2093738 Msa0048990:CDS 40.0%
ATCTGATGCAACAGCAAGTT+GGG - chr1_2:2093779-2093798 None:intergenic 40.0%
ACACCAGTAAAGGAGTTTGT+GGG + chr1_2:2093920-2093939 Msa0048990:CDS 40.0%
TGTGCGAATTGCATATGACA+AGG + chr1_2:2094130-2094149 Msa0048990:intron 40.0%
GTGCGAATTGCATATGACAA+GGG + chr1_2:2094131-2094150 Msa0048990:intron 40.0%
! ATGAGGGTGTAGCAAACTTT+AGG + chr1_2:2094206-2094225 Msa0048990:intron 40.0%
AGAAATAGTGTCCCAGCATA+TGG - chr1_2:2094650-2094669 None:intergenic 40.0%
ATATGCTGGGACACTATTTC+TGG + chr1_2:2094649-2094668 Msa0048990:CDS 40.0%
ATGCACATCAAAGTTCCAGT+TGG - chr1_2:2094846-2094865 None:intergenic 40.0%
ACTGGAACTTTGATGTGCAT+TGG + chr1_2:2094846-2094865 Msa0048990:CDS 40.0%
ATATCAGCATCCTCCTTTGA+TGG + chr1_2:2094890-2094909 Msa0048990:CDS 40.0%
TAGCAAGGAATGTTGTGATG+AGG + chr1_2:2095039-2095058 Msa0048990:intron 40.0%
CTTTATGAGACTACTTCAGC+TGG - chr1_2:2095162-2095181 None:intergenic 40.0%
CAGCTGAAGTAGTCTCATAA+AGG + chr1_2:2095160-2095179 Msa0048990:intron 40.0%
TAGGAGGGACAACATGAAAT+TGG - chr1_2:2095232-2095251 None:intergenic 40.0%
TTACAGACAGAGTTGTAGGA+GGG - chr1_2:2095247-2095266 None:intergenic 40.0%
GATCTTACAGACAGAGTTGT+AGG - chr1_2:2095251-2095270 None:intergenic 40.0%
AGTTTACAAAGAAGCAGCCA+AGG + chr1_2:2095719-2095738 Msa0048990:intron 40.0%
AATCACTCTCTCCAGATTGA+CGG - chr1_2:2095875-2095894 None:intergenic 40.0%
! CAATCTGGAGAGAGTGATTT+TGG + chr1_2:2095876-2095895 Msa0048990:CDS 40.0%
CCATGTTATGCACATAAACC+TGG - chr1_2:2096347-2096366 None:intergenic 40.0%
CCAGGTTTATGTGCATAACA+TGG + chr1_2:2096344-2096363 Msa0048990:CDS 40.0%
TGAAGCTGCGATACAAAATG+GGG + chr1_2:2096404-2096423 Msa0048990:CDS 40.0%
ATGGGGAAAGAACTTTGCTA+AGG + chr1_2:2096421-2096440 Msa0048990:CDS 40.0%
TGGGGAAAGAACTTTGCTAA+GGG + chr1_2:2096422-2096441 Msa0048990:CDS 40.0%
ACAATCAAACGCAAACAGCA+TGG - chr1_2:2096509-2096528 None:intergenic 40.0%
ACAAAACTTCTCACACACCT+TGG + chr1_2:2096644-2096663 Msa0048990:CDS 40.0%
CACTAGGTACATTGAAACCA+AGG - chr1_2:2096664-2096683 None:intergenic 40.0%
TCCCAGGAAATAAATGCTCT+TGG + chr1_2:2096713-2096732 Msa0048990:CDS 40.0%
!! GTCCAAGAGCATTTATTTCC+TGG - chr1_2:2096718-2096737 None:intergenic 40.0%
TGCTAATAACACAGGACATG+TGG + chr1_2:2096751-2096770 Msa0048990:CDS 40.0%
GTTGTTGCGGATAATGCAAA+CGG + chr1_2:2096881-2096900 Msa0048990:CDS 40.0%
GGTTCAGACAAAATCGAAGA+TGG + chr1_2:2096902-2096921 Msa0048990:CDS 40.0%
AGACAAAATCGAAGATGGTG+TGG + chr1_2:2096907-2096926 Msa0048990:CDS 40.0%
TGCACACTGTCATCAAATGA+AGG - chr1_2:2096953-2096972 None:intergenic 40.0%
! ATGGTGATCGGTTCTTCTTA+AGG - chr1_2:2097105-2097124 None:intergenic 40.0%
GAACCGATCACCATACTTAA+AGG + chr1_2:2097111-2097130 Msa0048990:CDS 40.0%
!!! TTTTCAGGTTGTATCAGCGA+TGG + chr1_2:2097248-2097267 Msa0048990:intron 40.0%
!! TTTCCAGAATTTTAGAGGCC+TGG - chr1_2:2097304-2097323 None:intergenic 40.0%
TACACTGCAAAGAAGAGCAA+GGG - chr1_2:2097331-2097350 None:intergenic 40.0%
TTACACTGCAAAGAAGAGCA+AGG - chr1_2:2097332-2097351 None:intergenic 40.0%
CTTTGCAGTGTAAGTCTCAT+TGG + chr1_2:2097339-2097358 Msa0048990:intron 40.0%
ACCCCACTTATTCACCTTTA+AGG + chr1_2:2097545-2097564 Msa0048990:intron 40.0%
TTCTTGGTAAAGTAGCTGAG+CGG - chr1_2:2097584-2097603 None:intergenic 40.0%
ATTTATTCCCCGCTAGAATC+TGG + chr1_2:2097664-2097683 Msa0048990:intron 40.0%
TTTCCAATCCAGATTCTAGC+GGG - chr1_2:2097675-2097694 None:intergenic 40.0%
AAGCAAGTTGCCTAGGAATA+GGG - chr1_2:2097798-2097817 None:intergenic 40.0%
TAAGCAAGTTGCCTAGGAAT+AGG - chr1_2:2097799-2097818 None:intergenic 40.0%
!! ATGTTCAGAGGGGTATTGAT+AGG - chr1_2:2097878-2097897 None:intergenic 40.0%
GACAATGTGAATGTTCAGAG+GGG - chr1_2:2097888-2097907 None:intergenic 40.0%
GGACAATGTGAATGTTCAGA+GGG - chr1_2:2097889-2097908 None:intergenic 40.0%
AGGACAATGTGAATGTTCAG+AGG - chr1_2:2097890-2097909 None:intergenic 40.0%
GAACATTCACATTGTCCTCA+AGG + chr1_2:2097892-2097911 Msa0048990:intron 40.0%
!! AGTTTTATGCAATGGGATCC+TGG - chr1_2:2097945-2097964 None:intergenic 40.0%
GGCCTAATTACCCTTTCATT+GGG - chr1_2:2098013-2098032 None:intergenic 40.0%
TGGCCTAATTACCCTTTCAT+TGG - chr1_2:2098014-2098033 None:intergenic 40.0%
ATGAAAGGGTAATTAGGCCA+AGG + chr1_2:2098014-2098033 Msa0048990:intron 40.0%
ACAGAAGTTGTTGCAAGAAG+CGG - chr1_2:2098127-2098146 None:intergenic 40.0%
TTGCAACAACTTCTGTACTG+AGG + chr1_2:2098131-2098150 Msa0048990:intron 40.0%
AAGAATGATCAACAGGTGGT+AGG - chr1_2:2098262-2098281 None:intergenic 40.0%
AGCAACAATGTGTGTTGTGT+GGG - chr1_2:2098318-2098337 None:intergenic 40.0%
AAGCAACAATGTGTGTTGTG+TGG - chr1_2:2098319-2098338 None:intergenic 40.0%
!! TTGTTGCTTCTGCTATTTCC+CGG + chr1_2:2098330-2098349 Msa0048990:intron 40.0%
AGAGCAATGGAAAGAAGACT+GGG - chr1_2:2098409-2098428 None:intergenic 40.0%
GATTGATCAACCCATAACAG+AGG - chr1_2:2098451-2098470 None:intergenic 40.0%
AGGGTCAACAATCAGAAAAC+AGG - chr1_2:2098519-2098538 None:intergenic 40.0%
ATGTGCAAACTCTCAACGAA+GGG - chr1_2:2098538-2098557 None:intergenic 40.0%
TGTTTCTCTCAACATACCAC+TGG + chr1_2:2098746-2098765 Msa0048990:intron 40.0%
ACATTGAAATTGGGCCATGA+TGG - chr1_2:2098863-2098882 None:intergenic 40.0%
ATCATGGCCCAATTTCAATG+TGG + chr1_2:2098862-2098881 Msa0048990:intron 40.0%
! TGCAATGATTTTCGCGTGAT+GGG - chr1_2:2098898-2098917 None:intergenic 40.0%
GCACCATTCCTATTGTATTG+CGG + chr1_2:2098915-2098934 Msa0048990:intron 40.0%
AGACCGCAATACAATAGGAA+TGG - chr1_2:2098921-2098940 None:intergenic 40.0%
GTGATGAAAATCAATCGTGG+CGG - chr1_2:2098975-2098994 None:intergenic 40.0%
TCGGTGATGAAAATCAATCG+TGG - chr1_2:2098978-2098997 None:intergenic 40.0%
GGATCAATTAGGGAATTGGT+CGG - chr1_2:2098997-2099016 None:intergenic 40.0%
ATAATCCAGGAACTCCACAA+TGG + chr1_2:2099183-2099202 Msa0048990:intron 40.0%
TAATCCAGGAACTCCACAAT+GGG + chr1_2:2099184-2099203 Msa0048990:intron 40.0%
! AGTTTGCTCAGAGAGATGAA+TGG + chr1_2:2099273-2099292 Msa0048990:intron 40.0%
CACACTTGCTTCAAAACTCA+TGG + chr1_2:2099310-2099329 Msa0048990:CDS 40.0%
CACTTGCTTCAAAACTCATG+GGG + chr1_2:2099312-2099331 Msa0048990:CDS 40.0%
ACTTGCTTCAAAACTCATGG+GGG + chr1_2:2099313-2099332 Msa0048990:CDS 40.0%
ATTGCACTGTCTACAGAAAC+TGG + chr1_2:2099752-2099771 Msa0048990:CDS 40.0%
AGTATTCGTCAACCAGAAGT+GGG - chr1_2:2099875-2099894 None:intergenic 40.0%
AAGTATTCGTCAACCAGAAG+TGG - chr1_2:2099876-2099895 None:intergenic 40.0%
GAACATTTGTGCATACTGCA+TGG + chr1_2:2099931-2099950 Msa0048990:intron 40.0%
TAACTAGTGGGAGTGGTTAA+TGG + chr1_2:2100138-2100157 Msa0048990:intron 40.0%
TGTAAATGGCATCTGCCATA+CGG + chr1_2:2100229-2100248 Msa0048990:intron 40.0%
GTGAAGAAATTATGGGTGTG+GGG - chr1_2:2100405-2100424 None:intergenic 40.0%
GAAAATTCTCAATCACACGG+TGG + chr1_2:2100488-2100507 Msa0048990:CDS 40.0%
! GATTGAGTTGTGTCATCCTT+TGG + chr1_2:2100936-2100955 Msa0048990:intron 40.0%
!! TGTGTCATCCTTTGGTTTGA+TGG + chr1_2:2100944-2100963 Msa0048990:intron 40.0%
TGGTTTGATGGAAAACAGTG+CGG + chr1_2:2100956-2100975 Msa0048990:intron 40.0%
GGTTCAAGGTAGTCAAAATC+AGG + chr1_2:2100977-2100996 Msa0048990:intron 40.0%
AACAAGTAGAGTCGGGTAAT+TGG + chr1_2:2101378-2101397 Msa0048990:intron 40.0%
ACAAGTAGAGTCGGGTAATT+GGG + chr1_2:2101379-2101398 Msa0048990:intron 40.0%
ACCCATCAAAAAACAGGTTC+CGG + chr1_2:2101427-2101446 Msa0048990:intron 40.0%
ATTCTTCTTTGGTCTGGATC+TGG - chr1_2:2101459-2101478 None:intergenic 40.0%
CAGAATACCCACTAATTTCC+GGG - chr1_2:2101861-2101880 None:intergenic 40.0%
TAACCACCCATTACACCATT+GGG - chr1_2:2101891-2101910 None:intergenic 40.0%
ATAACCACCCATTACACCAT+TGG - chr1_2:2101892-2101911 None:intergenic 40.0%
! CCATATAGGGTTTTCCAGTT+TGG - chr1_2:2101925-2101944 None:intergenic 40.0%
CCAAACTGGAAAACCCTATA+TGG + chr1_2:2101922-2101941 Msa0048990:intron 40.0%
CTGGAAAACCCTATATGGTT+TGG + chr1_2:2101927-2101946 Msa0048990:intron 40.0%
!! ACCCTATATGGTTTGGGTTT+TGG + chr1_2:2101934-2101953 Msa0048990:intron 40.0%
CCCAAAACCCAAACCATATA+GGG - chr1_2:2101938-2101957 None:intergenic 40.0%
!! CCCTATATGGTTTGGGTTTT+GGG + chr1_2:2101935-2101954 Msa0048990:intron 40.0%
ACCCAAAACCCAAACCATAT+AGG - chr1_2:2101939-2101958 None:intergenic 40.0%
!! TTTTCTTTAGGGGTGTACGT+AGG - chr1_2:2101986-2102005 None:intergenic 40.0%
! GCGAATACCGATTATTGTTG+AGG + chr1_2:2102108-2102127 Msa0048990:intron 40.0%
!! CTTGATGATGAACAGCATCA+TGG - chr1_2:2102188-2102207 None:intergenic 40.0%
AGTTGTCTCGGAAAATGCAT+TGG + chr1_2:2102364-2102383 Msa0048990:intron 40.0%
CAACAAATTGACCAGAAGAG+TGG - chr1_2:2102472-2102491 None:intergenic 40.0%
TTAAGTCCAAACTCAACCAG+TGG + chr1_2:2102576-2102595 Msa0048990:intron 40.0%
CCAAATAATATGAACGCCAC+TGG - chr1_2:2102595-2102614 None:intergenic 40.0%
CCAGTGGCGTTCATATTATT+TGG + chr1_2:2102592-2102611 Msa0048990:intron 40.0%
!! TTTGTTGTTGGAAGGCACAA+TGG + chr1_2:2102638-2102657 Msa0048990:intron 40.0%
! TTGTTGTTGGAAGGCACAAT+GGG + chr1_2:2102639-2102658 Msa0048990:intron 40.0%
CAAACTTCCCAAATACTTCC+GGG + chr1_2:2102902-2102921 Msa0048990:CDS 40.0%
AAACTTCCCAAATACTTCCG+GGG + chr1_2:2102903-2102922 Msa0048990:CDS 40.0%
TGAGGTTCAAATACTCTCAC+AGG - chr1_2:2102937-2102956 None:intergenic 40.0%
CTAATCAAAGCAGGAGTTTG+AGG - chr1_2:2102955-2102974 None:intergenic 40.0%
CAATATCAGCAGCCAACATT+GGG + chr1_2:2102985-2103004 Msa0048990:CDS 40.0%
TTTGAACACCAGCAGAACTA+GGG - chr1_2:2103248-2103267 None:intergenic 40.0%
!! GCTGATACTTCAAAAGTACC+TGG + chr1_2:2103366-2103385 Msa0048990:CDS 40.0%
CTTGTCAATGATGTGACGAT+AGG - chr1_2:2103600-2103619 None:intergenic 40.0%
CTATCGTCACATCATTGACA+AGG + chr1_2:2103598-2103617 Msa0048990:CDS 40.0%
GAAGACAACTCAAAGAGACT+TGG + chr1_2:2103687-2103706 Msa0048990:CDS 40.0%
! ACAACTCAAAGAGACTTGGT+GGG + chr1_2:2103691-2103710 Msa0048990:CDS 40.0%
TTGTTTGCGAAGTTGAACAG+TGG + chr1_2:2103714-2103733 Msa0048990:CDS 40.0%
TGTTTGCGAAGTTGAACAGT+GGG + chr1_2:2103715-2103734 Msa0048990:CDS 40.0%
! GCGTTAGACAATGGTGATTT+TGG + chr1_2:2103783-2103802 Msa0048990:CDS 40.0%
! ATCTAGAGGCAGTAGTCTTT+TGG - chr1_2:2104102-2104121 None:intergenic 40.0%
TGAGCTAAACGAGAGATCGA+CGG - chr1_2:2091420-2091439 None:intergenic 45.0%
! CGATCTCTCGTTTAGCTCAT+CGG + chr1_2:2091421-2091440 Msa0048990:CDS 45.0%
GCAATTCAGGATCATCGGAT+TGG - chr1_2:2091475-2091494 None:intergenic 45.0%
TCCTGAATTGCCTCTTGTTG+CGG + chr1_2:2091484-2091503 Msa0048990:CDS 45.0%
CGATTAAACCGATCAGAGCT+AGG - chr1_2:2091515-2091534 None:intergenic 45.0%
!!! TTCGCTTTTGGTCTTGTTGC+TGG + chr1_2:2091572-2091591 Msa0048990:CDS 45.0%
!! TTGCTGGTGGATTAGTCGAT+GGG + chr1_2:2091588-2091607 Msa0048990:CDS 45.0%
GGAATCCTCTTGCTCTGATT+CGG + chr1_2:2091624-2091643 Msa0048990:CDS 45.0%
AACTTCCAAGCTACGAAGCA+CGG - chr1_2:2091998-2092017 None:intergenic 45.0%
TAGCTATGAAGCATGGACAC+AGG + chr1_2:2092207-2092226 Msa0048990:intron 45.0%
TTTGGACACTGAACATGCCT+TGG + chr1_2:2092338-2092357 Msa0048990:intron 45.0%
! GCACTGACATTTCTGATCCA+AGG - chr1_2:2092358-2092377 None:intergenic 45.0%
AGAAACACAGTGGTTTCTGC+TGG + chr1_2:2092671-2092690 Msa0048990:intron 45.0%
GATAAATGTTCTCAGCTCGG+AGG + chr1_2:2092955-2092974 Msa0048990:intron 45.0%
ACAATCAAGACTCAGCAGGT+GGG - chr1_2:2093052-2093071 None:intergenic 45.0%
AACAATCAAGACTCAGCAGG+TGG - chr1_2:2093053-2093072 None:intergenic 45.0%
GCACCTAATCTTCTTGCATC+TGG + chr1_2:2093167-2093186 Msa0048990:CDS 45.0%
!! TCAGAGACTTTTTCCCTCGA+TGG + chr1_2:2093264-2093283 Msa0048990:intron 45.0%
! ATATAATGGGACCACTGGTG+AGG + chr1_2:2093457-2093476 Msa0048990:intron 45.0%
!!! GGTTTTATTCTCCAGTGGTC+TGG + chr1_2:2093567-2093586 Msa0048990:intron 45.0%
! GTCGGTTCACATAGGACATA+AGG - chr1_2:2093695-2093714 None:intergenic 45.0%
CATCTGATGCAACAGCAAGT+TGG - chr1_2:2093780-2093799 None:intergenic 45.0%
GCTGTTGCATCAGATGAAGA+TGG + chr1_2:2093784-2093803 Msa0048990:CDS 45.0%
TGAGCATGTTGATGCAGCTT+TGG + chr1_2:2093879-2093898 Msa0048990:intron 45.0%
GAGCATGTTGATGCAGCTTT+GGG + chr1_2:2093880-2093899 Msa0048990:intron 45.0%
!! TGATGCAGCTTTGGGATATG+AGG + chr1_2:2093888-2093907 Msa0048990:intron 45.0%
GACACCAGTAAAGGAGTTTG+TGG + chr1_2:2093919-2093938 Msa0048990:CDS 45.0%
CACCAGTAAAGGAGTTTGTG+GGG + chr1_2:2093921-2093940 Msa0048990:CDS 45.0%
! TCAATGGATTTGTGGAAGGG+AGG - chr1_2:2094053-2094072 None:intergenic 45.0%
GATGTTACATTGCTTGGCTG+TGG + chr1_2:2094237-2094256 Msa0048990:intron 45.0%
AAGATAGCCGAACCATATGC+TGG + chr1_2:2094635-2094654 Msa0048990:CDS 45.0%
AGATAGCCGAACCATATGCT+GGG + chr1_2:2094636-2094655 Msa0048990:CDS 45.0%
TAGTGTCCCAGCATATGGTT+CGG - chr1_2:2094645-2094664 None:intergenic 45.0%
! ATTTCTGGAGAGGTGGTGTT+TGG + chr1_2:2094664-2094683 Msa0048990:intron 45.0%
!!! TTTTCTTTTCTGGTTGGGGG+TGG + chr1_2:2094789-2094808 Msa0048990:intron 45.0%
!!! TTTCTTTTCTGGTTGGGGGT+GGG + chr1_2:2094790-2094809 Msa0048990:intron 45.0%
ATTGCCTATGAATTGCCAGC+TGG + chr1_2:2094818-2094837 Msa0048990:CDS 45.0%
!! GCCGATTTTTCCATCAAAGG+AGG - chr1_2:2094903-2094922 None:intergenic 45.0%
CTTACAGACAGAGTTGTAGG+AGG - chr1_2:2095248-2095267 None:intergenic 45.0%
GAACACTTGGCTCACAAAAG+TGG - chr1_2:2095470-2095489 None:intergenic 45.0%
AGCCAAGGCATAACTGGTAT+AGG + chr1_2:2095734-2095753 Msa0048990:intron 45.0%
TGCCTATACCAGTTATGCCT+TGG - chr1_2:2095739-2095758 None:intergenic 45.0%
TGGTCAGTAAAGAGATCTGC+AGG - chr1_2:2095816-2095835 None:intergenic 45.0%
!!! TACCATTTTGGAGCTCTCAG+CGG - chr1_2:2096146-2096165 None:intergenic 45.0%
! GAATCTGAAGCAGAAGAACC+AGG - chr1_2:2096224-2096243 None:intergenic 45.0%
CATAACATGGTCACCGAAGA+CGG + chr1_2:2096357-2096376 Msa0048990:CDS 45.0%
! TGCGTTTGATTGTTAGCCTG+TGG + chr1_2:2096516-2096535 Msa0048990:intron 45.0%
TTGTTATGGCAGATCTGAGG+AGG + chr1_2:2096565-2096584 Msa0048990:intron 45.0%
TGAGGAGGAAAGGGAAACAT+GGG + chr1_2:2096580-2096599 Msa0048990:CDS 45.0%
! GGAAACATGGGGCTTTTTGA+AGG + chr1_2:2096592-2096611 Msa0048990:CDS 45.0%
GGCACATCTGCTAATAACAC+AGG + chr1_2:2096743-2096762 Msa0048990:CDS 45.0%
! TTTCTTTTTGGACAACGGGG+AGG + chr1_2:2096793-2096812 Msa0048990:CDS 45.0%
!! GATGGAGGAGTATCAGCTTT+GGG - chr1_2:2096842-2096861 None:intergenic 45.0%
!! AGATGGAGGAGTATCAGCTT+TGG - chr1_2:2096843-2096862 None:intergenic 45.0%
!! TGCTGGCAACTTTGTTGTTG+CGG + chr1_2:2096868-2096887 Msa0048990:CDS 45.0%
AATCGAAGATGGTGTGGAAG+TGG + chr1_2:2096913-2096932 Msa0048990:CDS 45.0%
CTTGTAGTCCCCAACAACTA+AGG - chr1_2:2096981-2097000 None:intergenic 45.0%
CTTAGTTGTTGGGGACTACA+AGG + chr1_2:2096979-2096998 Msa0048990:CDS 45.0%
!! ACACCAGGCCTCTAAAATTC+TGG + chr1_2:2097298-2097317 Msa0048990:CDS 45.0%
!! GTCTCATTGGTCTTTGCTAC+TGG + chr1_2:2097352-2097371 Msa0048990:intron 45.0%
!!! GCTCTCTTTTGTTTTGCCCT+AGG + chr1_2:2097460-2097479 Msa0048990:intron 45.0%
CATAATATATGCAGGGGCCA+GGG + chr1_2:2097508-2097527 Msa0048990:intron 45.0%
TTCCAATCCAGATTCTAGCG+GGG - chr1_2:2097674-2097693 None:intergenic 45.0%
AGCAAGTTGCCTAGGAATAG+GGG - chr1_2:2097797-2097816 None:intergenic 45.0%
TTATGCAATGGGATCCTGGT+GGG - chr1_2:2097941-2097960 None:intergenic 45.0%
TTTATGCAATGGGATCCTGG+TGG - chr1_2:2097942-2097961 None:intergenic 45.0%
AGTTGACCCATGGTTTCTGA+AGG + chr1_2:2097986-2098005 Msa0048990:intron 45.0%
GTTGACCCATGGTTTCTGAA+GGG + chr1_2:2097987-2098006 Msa0048990:intron 45.0%
! TTTCTGAAGGGCCCAATGAA+AGG + chr1_2:2097999-2098018 Msa0048990:intron 45.0%
! TTCTGAAGGGCCCAATGAAA+GGG + chr1_2:2098000-2098019 Msa0048990:intron 45.0%
GGCCCAATGAAAGGGTAATT+AGG + chr1_2:2098008-2098027 Msa0048990:intron 45.0%
GTAATTAGGCCAAGGTGTGA+AGG + chr1_2:2098022-2098041 Msa0048990:intron 45.0%
AAGACGTCTGTGGACCTAAT+GGG - chr1_2:2098049-2098068 None:intergenic 45.0%
ATTACAGCAGAAGACGTCTG+TGG - chr1_2:2098059-2098078 None:intergenic 45.0%
AGGACACAAGACGGGAAATA+TGG - chr1_2:2098084-2098103 None:intergenic 45.0%
AGAACAAGGAGGACACAAGA+CGG - chr1_2:2098093-2098112 None:intergenic 45.0%
ACCACAGATTGCTAATCGCT+GGG + chr1_2:2098161-2098180 Msa0048990:intron 45.0%
GGGTTCTTTCTGCAGAAAGT+TGG + chr1_2:2098182-2098201 Msa0048990:intron 45.0%
AAAGTTGGAGTCCAACAGCT+TGG + chr1_2:2098197-2098216 Msa0048990:intron 45.0%
AAGTTGGAGTCCAACAGCTT+GGG + chr1_2:2098198-2098217 Msa0048990:intron 45.0%
GGTAGGATATGCTAACGCAT+TGG - chr1_2:2098245-2098264 None:intergenic 45.0%
AGGGAAGAATGATCAACAGG+TGG - chr1_2:2098266-2098285 None:intergenic 45.0%
AGCAGGGAAGAATGATCAAC+AGG - chr1_2:2098269-2098288 None:intergenic 45.0%
ACAATGTGTGTTGTGTGGGT+GGG - chr1_2:2098314-2098333 None:intergenic 45.0%
AACAATGTGTGTTGTGTGGG+TGG - chr1_2:2098315-2098334 None:intergenic 45.0%
!! TGTTGCTTCTGCTATTTCCC+GGG + chr1_2:2098331-2098350 Msa0048990:intron 45.0%
GAGAGCAATGGAAAGAAGAC+TGG - chr1_2:2098410-2098429 None:intergenic 45.0%
GAAGGAAGAGAACAGCCTAA+GGG - chr1_2:2098489-2098508 None:intergenic 45.0%
TGAAGGAAGAGAACAGCCTA+AGG - chr1_2:2098490-2098509 None:intergenic 45.0%
TAGGCTGTTCTCTTCCTTCA+CGG + chr1_2:2098490-2098509 Msa0048990:intron 45.0%
CATGTGCAAACTCTCAACGA+AGG - chr1_2:2098539-2098558 None:intergenic 45.0%
AAAGAAGAGGCGAAGAAAGG+GGG - chr1_2:2098568-2098587 None:intergenic 45.0%
CAAAGAAGAGGCGAAGAAAG+GGG - chr1_2:2098569-2098588 None:intergenic 45.0%
CCAAAGAAGAGGCGAAGAAA+GGG - chr1_2:2098570-2098589 None:intergenic 45.0%
GAGCTTGGGGTTTATCTTCA+AGG - chr1_2:2098670-2098689 None:intergenic 45.0%
TGAAGATAAACCCCAAGCTC+AGG + chr1_2:2098670-2098689 Msa0048990:intron 45.0%
TAGATGGAGAAGTTTGCCAG+TGG - chr1_2:2098765-2098784 None:intergenic 45.0%
ATGGCGGCCACATTGAAATT+GGG - chr1_2:2098872-2098891 None:intergenic 45.0%
AATGGCGGCCACATTGAAAT+TGG - chr1_2:2098873-2098892 None:intergenic 45.0%
! GCAATGATTTTCGCGTGATG+GGG - chr1_2:2098897-2098916 None:intergenic 45.0%
! GTGCAATGATTTTCGCGTGA+TGG - chr1_2:2098899-2098918 None:intergenic 45.0%
AATTTGGTCAAGGAGCCTGT+CGG + chr1_2:2099400-2099419 Msa0048990:CDS 45.0%
ATTGTTCTTGCCTTGGCAAC+TGG + chr1_2:2099578-2099597 Msa0048990:CDS 45.0%
TTGTTCTTGCCTTGGCAACT+GGG + chr1_2:2099579-2099598 Msa0048990:CDS 45.0%
ACTCTTCAAATGCCCACTTC+TGG + chr1_2:2099860-2099879 Msa0048990:intron 45.0%
TCACACGGTGGATCCTATTA+TGG + chr1_2:2100500-2100519 Msa0048990:CDS 45.0%
AATATATTGGGCTGTTGGGG+TGG - chr1_2:2100790-2100809 None:intergenic 45.0%
ATAATGTACCTGAGGAGGCT+GGG - chr1_2:2100836-2100855 None:intergenic 45.0%
ATGGAAAACAGTGCGGTTCA+AGG + chr1_2:2100963-2100982 Msa0048990:intron 45.0%
AACTAGGGGTTTACATGGGT+TGG + chr1_2:2101327-2101346 Msa0048990:intron 45.0%
ACTAGGGGTTTACATGGGTT+GGG + chr1_2:2101328-2101347 Msa0048990:intron 45.0%
!!! CCCGGAACCTGTTTTTTGAT+GGG - chr1_2:2101431-2101450 None:intergenic 45.0%
CCCATCAAAAAACAGGTTCC+GGG + chr1_2:2101428-2101447 Msa0048990:intron 45.0%
!!! ACCCGGAACCTGTTTTTTGA+TGG - chr1_2:2101432-2101451 None:intergenic 45.0%
!! ATTGGGTTGGGTTGAGTAGT+GGG - chr1_2:2101834-2101853 None:intergenic 45.0%
! ACTAATTTCCGGGCTGGATT+GGG - chr1_2:2101851-2101870 None:intergenic 45.0%
AATCCAGCCCGGAAATTAGT+GGG + chr1_2:2101851-2101870 Msa0048990:intron 45.0%
!! GTATTCTGAAATCGGCCCAA+TGG + chr1_2:2101873-2101892 Msa0048990:intron 45.0%
AAATCGGCCCAATGGTGTAA+TGG + chr1_2:2101881-2101900 Msa0048990:intron 45.0%
AATCGGCCCAATGGTGTAAT+GGG + chr1_2:2101882-2101901 Msa0048990:intron 45.0%
TTGACCAGAAGAGTGGTCAA+GGG - chr1_2:2102465-2102484 None:intergenic 45.0%
ATTGACCAGAAGAGTGGTCA+AGG - chr1_2:2102466-2102485 None:intergenic 45.0%
ATGGGAGAAAGCTCATGCAT+TGG + chr1_2:2102657-2102676 Msa0048990:intron 45.0%
GGTTCAAATACTCTCACAGG+AGG - chr1_2:2102934-2102953 None:intergenic 45.0%
GCAATATCAGCAGCCAACAT+TGG + chr1_2:2102984-2103003 Msa0048990:CDS 45.0%
! TGGTAAGGTTGATTGGTAGG+CGG - chr1_2:2103132-2103151 None:intergenic 45.0%
! TGTAGGCTGGTAAGGTTGAT+TGG - chr1_2:2103139-2103158 None:intergenic 45.0%
GCACCTACCTCAAATCCAAT+TGG + chr1_2:2103210-2103229 Msa0048990:CDS 45.0%
GGGGTTTGCATGAATCCAAT+TGG - chr1_2:2103228-2103247 None:intergenic 45.0%
TTGAACACCAGCAGAACTAG+GGG - chr1_2:2103247-2103266 None:intergenic 45.0%
CTTTGAACACCAGCAGAACT+AGG - chr1_2:2103249-2103268 None:intergenic 45.0%
!! AATGAGACATCGGAAGCACT+GGG + chr1_2:2103627-2103646 Msa0048990:CDS 45.0%
GACAACTCAAAGAGACTTGG+TGG + chr1_2:2103690-2103709 Msa0048990:CDS 45.0%
GTTTGCGAAGTTGAACAGTG+GGG + chr1_2:2103716-2103735 Msa0048990:CDS 45.0%
! TAAGCTCCTTCAGCTTTGTC+AGG + chr1_2:2103761-2103780 Msa0048990:CDS 45.0%
CTTTGTCAGGCGTTAGACAA+TGG + chr1_2:2103774-2103793 Msa0048990:CDS 45.0%
TGGTACTGCCCTTCAAATTC+AGG + chr1_2:2103803-2103822 Msa0048990:CDS 45.0%
GACTACTGCCTCTAGATTGA+AGG + chr1_2:2104105-2104124 Msa0048990:three_prime_UTR 45.0%
!! AGATTGAAGGTGCAGGGTTT+TGG + chr1_2:2104118-2104137 Msa0048990:three_prime_UTR 45.0%
TAACCGACACTAGAACAGCT+TGG - chr1_2:2104363-2104382 None:intergenic 45.0%
!!! ATTTTAAAGAAAAAAATATA+AGG + chr1_2:2101756-2101775 Msa0048990:intron 5.0%
!!! AAAAAAAACAAAAATAATTT+TGG + chr1_2:2101805-2101824 Msa0048990:intron 5.0%
TCCGCAACAAGAGGCAATTC+AGG - chr1_2:2091488-2091507 None:intergenic 50.0%
! CTAGGGTATTCCGCAACAAG+AGG - chr1_2:2091497-2091516 None:intergenic 50.0%
!! CGGAATACCCTAGCTCTGAT+CGG + chr1_2:2091504-2091523 Msa0048990:CDS 50.0%
CGTCTTTCTTGGGGGAGAAA+CGG + chr1_2:2091533-2091552 Msa0048990:CDS 50.0%
!!! GCTTTTGGTCTTGTTGCTGG+TGG + chr1_2:2091575-2091594 Msa0048990:CDS 50.0%
!! GTTGCTGGTGGATTAGTCGA+TGG + chr1_2:2091587-2091606 Msa0048990:CDS 50.0%
ACTTCTATCGAATGCGCGTC+TGG + chr1_2:2091916-2091935 Msa0048990:intron 50.0%
TTGTGAGACAGTGAGAGCAG+TGG + chr1_2:2092549-2092568 Msa0048990:intron 50.0%
TGGGCACCTTGTAAGGCATA+AGG + chr1_2:2092997-2093016 Msa0048990:CDS 50.0%
GGGCACCTTGTAAGGCATAA+GGG + chr1_2:2092998-2093017 Msa0048990:CDS 50.0%
CCTTGTAAGGCATAAGGGAC+CGG + chr1_2:2093003-2093022 Msa0048990:CDS 50.0%
GCCCCAGATGCAAGAAGATT+AGG - chr1_2:2093173-2093192 None:intergenic 50.0%
!! GAGACTTTTTCCCTCGATGG+TGG + chr1_2:2093267-2093286 Msa0048990:intron 50.0%
ATCAAAAGAGGAGAGGGAGG+GGG - chr1_2:2093301-2093320 None:intergenic 50.0%
CATCAAAAGAGGAGAGGGAG+GGG - chr1_2:2093302-2093321 None:intergenic 50.0%
CCATCAAAAGAGGAGAGGGA+GGG - chr1_2:2093303-2093322 None:intergenic 50.0%
TCCATCAAAAGAGGAGAGGG+AGG - chr1_2:2093304-2093323 None:intergenic 50.0%
ATGATCACTGTGCAGGGTAG+TGG + chr1_2:2093362-2093381 Msa0048990:intron 50.0%
TTTACACCCTTCCTCACCAG+TGG - chr1_2:2093471-2093490 None:intergenic 50.0%
TTCTTTAGGTCCCAGACCAC+TGG - chr1_2:2093581-2093600 None:intergenic 50.0%
!! ACAACGCTGTCGGTTCACAT+AGG - chr1_2:2093703-2093722 None:intergenic 50.0%
! GCAAGTTGGGTAGCAACATC+AGG - chr1_2:2093766-2093785 None:intergenic 50.0%
TGCCCCACAAACTCCTTTAC+TGG - chr1_2:2093926-2093945 None:intergenic 50.0%
!! GACAAGGGATAGAGAGTGCT+AGG + chr1_2:2094146-2094165 Msa0048990:intron 50.0%
!! CTGGGACACTATTTCTGGAG+AGG + chr1_2:2094654-2094673 Msa0048990:CDS 50.0%
!! GGACACTATTTCTGGAGAGG+TGG + chr1_2:2094657-2094676 Msa0048990:intron 50.0%
GGTTCCAGCTGGCAATTCAT+AGG - chr1_2:2094825-2094844 None:intergenic 50.0%
AATTGCCAGCTGGAACCAAC+TGG + chr1_2:2094828-2094847 Msa0048990:CDS 50.0%
! AAGTTCCAGTTGGTTCCAGC+TGG - chr1_2:2094836-2094855 None:intergenic 50.0%
GAGGATGCTGATATTACCCC+AGG - chr1_2:2094884-2094903 None:intergenic 50.0%
GAGGAACTCTCTGCTCACAA+TGG - chr1_2:2095599-2095618 None:intergenic 50.0%
AGAAGCAGCCAAGGCATAAC+TGG + chr1_2:2095728-2095747 Msa0048990:intron 50.0%
!! GGAGAGAGTGATTTTGGTGC+AGG + chr1_2:2095882-2095901 Msa0048990:CDS 50.0%
TACCGCTGAGAGCTCCAAAA+TGG + chr1_2:2096141-2096160 Msa0048990:CDS 50.0%
AAGCCAAAAGACGCACCAAC+AGG - chr1_2:2096176-2096195 None:intergenic 50.0%
!!! GTTGGTGCGTCTTTTGGCTT+TGG + chr1_2:2096176-2096195 Msa0048990:CDS 50.0%
TCTGCTTCAGATTCACCTGC+TGG + chr1_2:2096230-2096249 Msa0048990:intron 50.0%
CTGCTTCAGATTCACCTGCT+GGG + chr1_2:2096231-2096250 Msa0048990:intron 50.0%
TGCTTCAGATTCACCTGCTG+GGG + chr1_2:2096232-2096251 Msa0048990:intron 50.0%
TGGAACAATGTTGCGCTTCG+TGG - chr1_2:2096489-2096508 None:intergenic 50.0%
ATGGCAGATCTGAGGAGGAA+AGG + chr1_2:2096570-2096589 Msa0048990:intron 50.0%
TGGCAGATCTGAGGAGGAAA+GGG + chr1_2:2096571-2096590 Msa0048990:intron 50.0%
CTGAGGAGGAAAGGGAAACA+TGG + chr1_2:2096579-2096598 Msa0048990:CDS 50.0%
GAGGAGGAAAGGGAAACATG+GGG + chr1_2:2096581-2096600 Msa0048990:CDS 50.0%
!! GGAGTATCAGCTTTGGGACT+GGG - chr1_2:2096836-2096855 None:intergenic 50.0%
!! AGGAGTATCAGCTTTGGGAC+TGG - chr1_2:2096837-2096856 None:intergenic 50.0%
AGCTGATACTCCTCCATCTG+CGG + chr1_2:2096844-2096863 Msa0048990:CDS 50.0%
TGCAGCGTGCCTTAGTTGTT+GGG + chr1_2:2096969-2096988 Msa0048990:CDS 50.0%
! CCTCCTTGTGGGAAAGTACA+CGG + chr1_2:2097071-2097090 Msa0048990:CDS 50.0%
! CTCCTTGTGGGAAAGTACAC+GGG + chr1_2:2097072-2097091 Msa0048990:CDS 50.0%
ATCCCGTGTACTTTCCCACA+AGG - chr1_2:2097077-2097096 None:intergenic 50.0%
! TCTTGAGCCTTGTGAACACC+AGG + chr1_2:2097283-2097302 Msa0048990:CDS 50.0%
TTAGAGGCCTGGTGTTCACA+AGG - chr1_2:2097293-2097312 None:intergenic 50.0%
GCATAATATATGCAGGGGCC+AGG + chr1_2:2097507-2097526 Msa0048990:intron 50.0%
TTCCCCGCTAGAATCTGGAT+TGG + chr1_2:2097669-2097688 Msa0048990:intron 50.0%
CCTAGGAATAGGGGTTGAGA+TGG - chr1_2:2097788-2097807 None:intergenic 50.0%
CCATCTCAACCCCTATTCCT+AGG + chr1_2:2097785-2097804 Msa0048990:intron 50.0%
TTGGGCCCTTCAGAAACCAT+GGG - chr1_2:2097995-2098014 None:intergenic 50.0%
ATTGGGCCCTTCAGAAACCA+TGG - chr1_2:2097996-2098015 None:intergenic 50.0%
AGACGTCTGTGGACCTAATG+GGG - chr1_2:2098048-2098067 None:intergenic 50.0%
GAAGACGTCTGTGGACCTAA+TGG - chr1_2:2098050-2098069 None:intergenic 50.0%
GAACAAGGAGGACACAAGAC+GGG - chr1_2:2098092-2098111 None:intergenic 50.0%
CACCACAGATTGCTAATCGC+TGG + chr1_2:2098160-2098179 Msa0048990:intron 50.0%
CCACAGATTGCTAATCGCTG+GGG + chr1_2:2098162-2098181 Msa0048990:intron 50.0%
! GGATATGCTAACGCATTGGC+TGG - chr1_2:2098241-2098260 None:intergenic 50.0%
GGGATGTTGAGAAAGTGGAG+GGG - chr1_2:2098292-2098311 None:intergenic 50.0%
GGGGATGTTGAGAAAGTGGA+GGG - chr1_2:2098293-2098312 None:intergenic 50.0%
AATGTGTGTTGTGTGGGTGG+GGG - chr1_2:2098312-2098331 None:intergenic 50.0%
CAATGTGTGTTGTGTGGGTG+GGG - chr1_2:2098313-2098332 None:intergenic 50.0%
AAAACCAGCTGGGAACTTCC+CGG - chr1_2:2098352-2098371 None:intergenic 50.0%
CAGAAAACAGGAAGCCGTGA+AGG - chr1_2:2098507-2098526 None:intergenic 50.0%
CCCTTTCTTCGCCTCTTCTT+TGG + chr1_2:2098567-2098586 Msa0048990:intron 50.0%
GCCAAAGAAGAGGCGAAGAA+AGG - chr1_2:2098571-2098590 None:intergenic 50.0%
AAAGGATGCGGCCAAAGAAG+AGG - chr1_2:2098581-2098600 None:intergenic 50.0%
!! TCTGTTTCTACCTGTCCCAC+TGG + chr1_2:2098616-2098635 Msa0048990:intron 50.0%
AAGGGCCAACAAGAACCAGT+GGG - chr1_2:2098634-2098653 None:intergenic 50.0%
ATGCAACAGCACCTGAGCTT+GGG - chr1_2:2098684-2098703 None:intergenic 50.0%
CATGAGCAGAGCCTTCTCAA+AGG + chr1_2:2098701-2098720 Msa0048990:intron 50.0%
!! AGAGCGCTGTCCACCATATA+TGG - chr1_2:2098835-2098854 None:intergenic 50.0%
CAGCGCTCTTAGATCCATCA+TGG + chr1_2:2098846-2098865 Msa0048990:intron 50.0%
!! ATTTTCGCGTGATGGGGCAA+TGG - chr1_2:2098891-2098910 None:intergenic 50.0%
TCTGCTACTGCCATCTACCT+TGG + chr1_2:2098947-2098966 Msa0048990:intron 50.0%
TTGTCCCATTGTGGAGTTCC+TGG - chr1_2:2099191-2099210 None:intergenic 50.0%
AGCAAGTGTGTCGCAAAGCA+TGG - chr1_2:2099300-2099319 None:intergenic 50.0%
CTCAACAAGCTTGCACAGAG+AGG - chr1_2:2099621-2099640 None:intergenic 50.0%
GAGAGAACTACAGCTCCGTA+TGG - chr1_2:2100247-2100266 None:intergenic 50.0%
TCATGTGCCACCTGGTGTTT+CGG + chr1_2:2100684-2100703 Msa0048990:CDS 50.0%
TATTGACCTCCCGAAACACC+AGG - chr1_2:2100697-2100716 None:intergenic 50.0%
TATGGCGGCTGATAGCTATC+AGG - chr1_2:2100721-2100740 None:intergenic 50.0%
TAATGTACCTGAGGAGGCTG+GGG - chr1_2:2100835-2100854 None:intergenic 50.0%
GATAATGTACCTGAGGAGGC+TGG - chr1_2:2100837-2100856 None:intergenic 50.0%
ATTCACAAGGCTGTGCTCAG+TGG + chr1_2:2100902-2100921 Msa0048990:intron 50.0%
GTCGGGTAATTGGGTGTGTA+TGG + chr1_2:2101388-2101407 Msa0048990:intron 50.0%
!! GATTGGGTTGGGTTGAGTAG+TGG - chr1_2:2101835-2101854 None:intergenic 50.0%
! CACTAATTTCCGGGCTGGAT+TGG - chr1_2:2101852-2101871 None:intergenic 50.0%
CAATCCAGCCCGGAAATTAG+TGG + chr1_2:2101850-2101869 Msa0048990:intron 50.0%
ATACCCACTAATTTCCGGGC+TGG - chr1_2:2101857-2101876 None:intergenic 50.0%
! AGGGTTTTCCAGTTTGGGTG+AGG - chr1_2:2101919-2101938 None:intergenic 50.0%
GTACGTAGGTCAGTTTGGGT+TGG - chr1_2:2101972-2101991 None:intergenic 50.0%
GGGTGTACGTAGGTCAGTTT+GGG - chr1_2:2101976-2101995 None:intergenic 50.0%
TTCTGCGATTATGGTCGCAG+TGG - chr1_2:2102038-2102057 None:intergenic 50.0%
! ACGTATAGCTATGCCGACTG+CGG + chr1_2:2102405-2102424 Msa0048990:intron 50.0%
TGACCAGAAGAGTGGTCAAG+GGG - chr1_2:2102464-2102483 None:intergenic 50.0%
! TGAACGCCACTGGTTGAGTT+TGG - chr1_2:2102585-2102604 None:intergenic 50.0%
!! GTTGTGCCCCGGAAGTATTT+GGG - chr1_2:2102912-2102931 None:intergenic 50.0%
GTTGGCTGCTGATATTGCTC+TGG - chr1_2:2102982-2103001 None:intergenic 50.0%
TGATTGGTAGGCGGGAAAGT+TGG - chr1_2:2103123-2103142 None:intergenic 50.0%
! GGTAAGGTTGATTGGTAGGC+GGG - chr1_2:2103131-2103150 None:intergenic 50.0%
! GGCTGGTAAGGTTGATTGGT+AGG - chr1_2:2103135-2103154 None:intergenic 50.0%
TGACCAATGTGAGATGGAGC+AGG - chr1_2:2103165-2103184 None:intergenic 50.0%
GCTCCATCTCACATTGGTCA+TGG + chr1_2:2103165-2103184 Msa0048990:CDS 50.0%
!! ATGCAAACCCCTAGTTCTGC+TGG + chr1_2:2103237-2103256 Msa0048990:CDS 50.0%
TCTGCTGGTGTTCAAAGACC+TGG + chr1_2:2103252-2103271 Msa0048990:CDS 50.0%
CTGCTGGTGTTCAAAGACCT+GGG + chr1_2:2103253-2103272 Msa0048990:CDS 50.0%
TGCTGGTGTTCAAAGACCTG+GGG + chr1_2:2103254-2103273 Msa0048990:CDS 50.0%
GTATCAGCAGTCTGCACAGT+AGG - chr1_2:2103354-2103373 None:intergenic 50.0%
! CAATGAGACATCGGAAGCAC+TGG + chr1_2:2103626-2103645 Msa0048990:CDS 50.0%
GTGCAAACCCAGCAAAGAAG+CGG + chr1_2:2103658-2103677 Msa0048990:CDS 50.0%
TGCAAACCCAGCAAAGAAGC+GGG + chr1_2:2103659-2103678 Msa0048990:CDS 50.0%
CTATCTCCCGCTTCTTTGCT+GGG - chr1_2:2103668-2103687 None:intergenic 50.0%
TCTATCTCCCGCTTCTTTGC+TGG - chr1_2:2103669-2103688 None:intergenic 50.0%
CTAACGCCTGACAAAGCTGA+AGG - chr1_2:2103770-2103789 None:intergenic 50.0%
AATGGGATGAATGCCAGTCC+TGG + chr1_2:2103934-2103953 Msa0048990:CDS 50.0%
GATGAATGCCAGTCCTGGTT+AGG + chr1_2:2103939-2103958 Msa0048990:CDS 50.0%
TCAGTGAACCTAACCAGGAC+TGG - chr1_2:2103950-2103969 None:intergenic 50.0%
TCGCTTCAGTGAACCTAACC+AGG - chr1_2:2103955-2103974 None:intergenic 50.0%
! TGCCTCTAGATTGAAGGTGC+AGG + chr1_2:2104111-2104130 Msa0048990:three_prime_UTR 50.0%
! GCCTCTAGATTGAAGGTGCA+GGG + chr1_2:2104112-2104131 Msa0048990:three_prime_UTR 50.0%
ACCCTGCACCTTCAATCTAG+AGG - chr1_2:2104116-2104135 None:intergenic 50.0%
! TTTTCATCACCACACCCCTC+TGG + chr1_2:2104321-2104340 Msa0048990:three_prime_UTR 50.0%
CATCACCATTGGTACCAGAG+GGG - chr1_2:2104338-2104357 None:intergenic 50.0%
GCATCACCATTGGTACCAGA+GGG - chr1_2:2104339-2104358 None:intergenic 50.0%
AGCATCACCATTGGTACCAG+AGG - chr1_2:2104340-2104359 None:intergenic 50.0%
! ACAGCTTGGAGCATCACCAT+TGG - chr1_2:2104349-2104368 None:intergenic 50.0%
GCTCCAAGCTGTTCTAGTGT+CGG + chr1_2:2104357-2104376 Msa0048990:three_prime_UTR 50.0%
AAACGAGAGATCGACGGCTC+CGG - chr1_2:2091414-2091433 None:intergenic 55.0%
CTCTCGTTGGGCACCTTGTA+AGG + chr1_2:2092990-2093009 Msa0048990:CDS 55.0%
CCGGTCCCTTATGCCTTACA+AGG - chr1_2:2093006-2093025 None:intergenic 55.0%
! TCTTCTTGCATCTGGGGCTG+AGG + chr1_2:2093175-2093194 Msa0048990:CDS 55.0%
GGGCTAAACACCACCATCGA+GGG - chr1_2:2093280-2093299 None:intergenic 55.0%
TCAAAAGAGGAGAGGGAGGG+GGG - chr1_2:2093300-2093319 None:intergenic 55.0%
! CCCTCCCTCTCCTCTTTTGA+TGG + chr1_2:2093300-2093319 Msa0048990:intron 55.0%
AATGGGACCACTGGTGAGGA+AGG + chr1_2:2093461-2093480 Msa0048990:intron 55.0%
ATGGGACCACTGGTGAGGAA+GGG + chr1_2:2093462-2093481 Msa0048990:intron 55.0%
GAGTTTGTGGGGCACACTAG+AGG + chr1_2:2093932-2093951 Msa0048990:CDS 55.0%
CTCAGCGGTACTGCACAGAA+AGG - chr1_2:2096131-2096150 None:intergenic 55.0%
! CGTCCTGTTGGTGCGTCTTT+TGG + chr1_2:2096170-2096189 Msa0048990:CDS 55.0%
!!! GGTGCGTCTTTTGGCTTTGG+AGG + chr1_2:2096179-2096198 Msa0048990:CDS 55.0%
ACGACTCACCAGACCGTCTT+CGG - chr1_2:2096373-2096392 None:intergenic 55.0%
TCAGCAGATGCAAGAGCCAC+AGG - chr1_2:2096535-2096554 None:intergenic 55.0%
GTGCAGCGTGCCTTAGTTGT+TGG + chr1_2:2096968-2096987 Msa0048990:CDS 55.0%
GCAGCGTGCCTTAGTTGTTG+GGG + chr1_2:2096970-2096989 Msa0048990:CDS 55.0%
ATGTGGGTAGCACCTCCTTG+TGG + chr1_2:2097059-2097078 Msa0048990:CDS 55.0%
TGTGGGTAGCACCTCCTTGT+GGG + chr1_2:2097060-2097079 Msa0048990:CDS 55.0%
CCGTGTACTTTCCCACAAGG+AGG - chr1_2:2097074-2097093 None:intergenic 55.0%
TATATGCAGGGGCCAGGGTT+TGG + chr1_2:2097513-2097532 Msa0048990:intron 55.0%
! AGGTGAATAAGTGGGGTGCC+CGG - chr1_2:2097542-2097561 None:intergenic 55.0%
CTAATGGGGCCTTCACACCT+TGG - chr1_2:2098034-2098053 None:intergenic 55.0%
CAAGGTGTGAAGGCCCCATT+AGG + chr1_2:2098032-2098051 Msa0048990:intron 55.0%
GTCCTCCTTGTTCTTGCTCC+TGG + chr1_2:2098099-2098118 Msa0048990:intron 55.0%
CACCAGGAGCAAGAACAAGG+AGG - chr1_2:2098104-2098123 None:intergenic 55.0%
TTGTTGCAAGAAGCGGCACC+AGG - chr1_2:2098120-2098139 None:intergenic 55.0%
CCCCAGCGATTAGCAATCTG+TGG - chr1_2:2098165-2098184 None:intergenic 55.0%
TTGGAGTCCAACAGCTTGGG+TGG + chr1_2:2098201-2098220 Msa0048990:intron 55.0%
ATCACTGCCACCCAAGCTGT+TGG - chr1_2:2098211-2098230 None:intergenic 55.0%
AACAGCTTGGGTGGCAGTGA+TGG + chr1_2:2098210-2098229 Msa0048990:intron 55.0%
TGAGAAAGTGGAGGGGAGCA+GGG - chr1_2:2098285-2098304 None:intergenic 55.0%
TTGAGAAAGTGGAGGGGAGC+AGG - chr1_2:2098286-2098305 None:intergenic 55.0%
GGGGGATGTTGAGAAAGTGG+AGG - chr1_2:2098294-2098313 None:intergenic 55.0%
GGTGGGGGATGTTGAGAAAG+TGG - chr1_2:2098297-2098316 None:intergenic 55.0%
AAACCAGCTGGGAACTTCCC+GGG - chr1_2:2098351-2098370 None:intergenic 55.0%
TTGTCCTGACGTCCTCCCTT+AGG + chr1_2:2098471-2098490 Msa0048990:intron 55.0%
GGAAGAGAACAGCCTAAGGG+AGG - chr1_2:2098486-2098505 None:intergenic 55.0%
CCAACAAGAACCAGTGGGAC+AGG - chr1_2:2098629-2098648 None:intergenic 55.0%
!! CCTGTCCCACTGGTTCTTGT+TGG + chr1_2:2098626-2098645 Msa0048990:intron 55.0%
CAAGGGCCAACAAGAACCAG+TGG - chr1_2:2098635-2098654 None:intergenic 55.0%
TGCAACAGCACCTGAGCTTG+GGG - chr1_2:2098683-2098702 None:intergenic 55.0%
CATGCAACAGCACCTGAGCT+TGG - chr1_2:2098685-2098704 None:intergenic 55.0%
GAGCAGAGCCTTCTCAAAGG+TGG + chr1_2:2098704-2098723 Msa0048990:intron 55.0%
GCGCTGTCCACCATATATGG+TGG - chr1_2:2098832-2098851 None:intergenic 55.0%
AATCAATCGTGGCGGCACCA+AGG - chr1_2:2098967-2098986 None:intergenic 55.0%
GCTTCAAAACTCATGGGGGC+TGG + chr1_2:2099317-2099336 Msa0048990:CDS 55.0%
AGCCTGTCGGATGAGCACAA+GGG + chr1_2:2099413-2099432 Msa0048990:CDS 55.0%
AGGGTTGCTGACCACAGCAA+TGG + chr1_2:2099667-2099686 Msa0048990:CDS 55.0%
CATGTGCCACCTGGTGTTTC+GGG + chr1_2:2100685-2100704 Msa0048990:CDS 55.0%
!! GGAACAGGAGCACCATATCC+AGG - chr1_2:2100760-2100779 None:intergenic 55.0%
!! ATGGGTTGGGTCAAACCCAC+TGG + chr1_2:2101341-2101360 Msa0048990:intron 55.0%
GGTCTGGATCTGGTTGTACC+CGG - chr1_2:2101449-2101468 None:intergenic 55.0%
! TTTCCGGGCTGGATTGGGTT+GGG - chr1_2:2101846-2101865 None:intergenic 55.0%
! ATTTCCGGGCTGGATTGGGT+TGG - chr1_2:2101847-2101866 None:intergenic 55.0%
GGGGTGTACGTAGGTCAGTT+TGG - chr1_2:2101977-2101996 None:intergenic 55.0%
TGCGATTATGGTCGCAGTGG+TGG - chr1_2:2102035-2102054 None:intergenic 55.0%
! CTATGCCGACTGCGGACAAA+GGG + chr1_2:2102413-2102432 Msa0048990:intron 55.0%
! TATGCCGACTGCGGACAAAG+GGG + chr1_2:2102414-2102433 Msa0048990:intron 55.0%
AAGTCCCCTTTGTCCGCAGT+CGG - chr1_2:2102421-2102440 None:intergenic 55.0%
ACCAGAAGAGTGGTCAAGGG+GGG - chr1_2:2102462-2102481 None:intergenic 55.0%
GACCAGAAGAGTGGTCAAGG+GGG - chr1_2:2102463-2102482 None:intergenic 55.0%
!! GGTTGTGCCCCGGAAGTATT+TGG - chr1_2:2102913-2102932 None:intergenic 55.0%
! TGAGATGGAGCAGGAGGTGT+AGG - chr1_2:2103156-2103175 None:intergenic 55.0%
CCAATGTGAGATGGAGCAGG+AGG - chr1_2:2103162-2103181 None:intergenic 55.0%
CCTCCTGCTCCATCTCACAT+TGG + chr1_2:2103159-2103178 Msa0048990:CDS 55.0%
GGGCCATGACCAATGTGAGA+TGG - chr1_2:2103171-2103190 None:intergenic 55.0%
CCGCAACGTGTGGTAAGTTC+GGG - chr1_2:2103191-2103210 None:intergenic 55.0%
CCCGAACTTACCACACGTTG+CGG + chr1_2:2103188-2103207 Msa0048990:CDS 55.0%
GCCGCAACGTGTGGTAAGTT+CGG - chr1_2:2103192-2103211 None:intergenic 55.0%
TGGTGTTCAAAGACCTGGGG+TGG + chr1_2:2103257-2103276 Msa0048990:CDS 55.0%
GGTGTTCAAAGACCTGGGGT+GGG + chr1_2:2103258-2103277 Msa0048990:CDS 55.0%
GGTTGAATTGATCCCACCCC+AGG - chr1_2:2103273-2103292 None:intergenic 55.0%
TTGCACAGGTTGCGGTTGAG+GGG - chr1_2:2103304-2103323 None:intergenic 55.0%
GTTGCACAGGTTGCGGTTGA+GGG - chr1_2:2103305-2103324 None:intergenic 55.0%
TCAACCGCAACCTGTGCAAC+CGG + chr1_2:2103305-2103324 Msa0048990:CDS 55.0%
TCAGCAGTCTGCACAGTAGG+TGG - chr1_2:2103351-2103370 None:intergenic 55.0%
! ATCGTACCGGCGGCGAGATA+CGG - chr1_2:2091389-2091408 None:intergenic 60.0%
CGAATGCGCGTCTGGTGTCT+CGG + chr1_2:2091924-2091943 Msa0048990:intron 60.0%
GGTGTCCGTGCTTCGTAGCT+TGG + chr1_2:2091990-2092009 Msa0048990:intron 60.0%
! CTTGCATCTGGGGCTGAGGA+TGG + chr1_2:2093179-2093198 Msa0048990:CDS 60.0%
GGGGCTAAACACCACCATCG+AGG - chr1_2:2093281-2093300 None:intergenic 60.0%
! GGTAGTGGCTCTGCTTCCCA+GGG + chr1_2:2093377-2093396 Msa0048990:CDS 60.0%
! GCTGAGCACCGCCGTCTAAT+TGG - chr1_2:2093730-2093749 None:intergenic 60.0%
CTGCAGGGTTGCCGTCAATC+TGG + chr1_2:2095861-2095880 Msa0048990:CDS 60.0%
TTCACCTGCTGGGGCTTCAG+AGG + chr1_2:2096241-2096260 Msa0048990:intron 60.0%
CATGGTCACCGAAGACGGTC+TGG + chr1_2:2096362-2096381 Msa0048990:CDS 60.0%
AAGTTGCCAGCAGCCGCAGA+TGG - chr1_2:2096860-2096879 None:intergenic 60.0%
! GTGAATAAGTGGGGTGCCCG+GGG - chr1_2:2097540-2097559 None:intergenic 60.0%
! GGTGAATAAGTGGGGTGCCC+GGG - chr1_2:2097541-2097560 None:intergenic 60.0%
CGGCACCAGGAGCAAGAACA+AGG - chr1_2:2098107-2098126 None:intergenic 60.0%
TTTCCCGGGAAGTTCCCAGC+TGG + chr1_2:2098345-2098364 Msa0048990:intron 60.0%
ACAGCCTAAGGGAGGACGTC+AGG - chr1_2:2098478-2098497 None:intergenic 60.0%
! TTCGCGTGATGGGGCAATGG+CGG - chr1_2:2098888-2098907 None:intergenic 60.0%
GAGCCTGTCGGATGAGCACA+AGG + chr1_2:2099412-2099431 Msa0048990:CDS 60.0%
GCCTGTCGGATGAGCACAAG+GGG + chr1_2:2099414-2099433 Msa0048990:CDS 60.0%
TCCCCTTGTGCTCATCCGAC+AGG - chr1_2:2099418-2099437 None:intergenic 60.0%
CCTTGGCAACTGGGCAGAAG+CGG + chr1_2:2099588-2099607 Msa0048990:CDS 60.0%
GTATCCACTCATGTGCCGCC+TGG + chr1_2:2100658-2100677 Msa0048990:CDS 60.0%
AACACCAGGCGGCACATGAG+TGG - chr1_2:2100665-2100684 None:intergenic 60.0%
GGTGGCACATGAACACCAGG+CGG - chr1_2:2100676-2100695 None:intergenic 60.0%
CCAGGTGGCACATGAACACC+AGG - chr1_2:2100679-2100698 None:intergenic 60.0%
CCTGGTGTTCATGTGCCACC+TGG + chr1_2:2100676-2100695 Msa0048990:CDS 60.0%
TGACCTCCCGAAACACCAGG+TGG - chr1_2:2100694-2100713 None:intergenic 60.0%
TATTGGGCTGTTGGGGTGGC+TGG - chr1_2:2100786-2100805 None:intergenic 60.0%
TGGGGCTGAGTAGTCGGTGA+TGG - chr1_2:2100817-2100836 None:intergenic 60.0%
CAACCCAACCCAATCCAGCC+CGG + chr1_2:2101840-2101859 Msa0048990:intron 60.0%
! CGGCCCAATGGTGTAATGGG+TGG + chr1_2:2101885-2101904 Msa0048990:intron 60.0%
! GCTATGCCGACTGCGGACAA+AGG + chr1_2:2102412-2102431 Msa0048990:intron 60.0%
TCCCCCCTTGACCACTCTTC+TGG + chr1_2:2102458-2102477 Msa0048990:intron 60.0%
TCTCACAGGAGGTTGTGCCC+CGG - chr1_2:2102923-2102942 None:intergenic 60.0%
! GCAGGAGGTGTAGGCTGGTA+AGG - chr1_2:2103147-2103166 None:intergenic 60.0%
! ATGGAGCAGGAGGTGTAGGC+TGG - chr1_2:2103152-2103171 None:intergenic 60.0%
TGCACAGGTTGCGGTTGAGG+GGG - chr1_2:2103303-2103322 None:intergenic 60.0%
GGTTGCACAGGTTGCGGTTG+AGG - chr1_2:2103306-2103325 None:intergenic 60.0%
!! ACAGTAGGTGGTGGAGCTGC+TGG - chr1_2:2103339-2103358 None:intergenic 60.0%
GCAGTCTGCACAGTAGGTGG+TGG - chr1_2:2103348-2103367 None:intergenic 60.0%
!! GAGACATCGGAAGCACTGGG+AGG + chr1_2:2103630-2103649 Msa0048990:CDS 60.0%
CCATTGGTACCAGAGGGGTG+TGG - chr1_2:2104333-2104352 None:intergenic 60.0%
CCACACCCCTCTGGTACCAA+TGG + chr1_2:2104330-2104349 Msa0048990:three_prime_UTR 60.0%
TCGATCGGCGTCAGTCGCAC+TGG + chr1_2:2091352-2091371 Msa0048990:CDS 65.0%
GCGGCGAGATACGGTGCATC+CGG - chr1_2:2091380-2091399 None:intergenic 65.0%
GATGCACCGTATCTCGCCGC+CGG + chr1_2:2091380-2091399 Msa0048990:CDS 65.0%
GTATCTCGCCGCCGGTACGA+TGG + chr1_2:2091388-2091407 Msa0048990:CDS 65.0%
! GGGTAGTGGCTCTGCTTCCC+AGG + chr1_2:2093376-2093395 Msa0048990:intron 65.0%
GGCGGTGCTCAGCTTTGCAG+TGG + chr1_2:2093737-2093756 Msa0048990:CDS 65.0%
!! CTTGCCTCTGAAGCCCCAGC+AGG - chr1_2:2096248-2096267 None:intergenic 65.0%
ACTCCTCCATCTGCGGCTGC+TGG + chr1_2:2096851-2096870 Msa0048990:CDS 65.0%
TTGCCAGCAGCCGCAGATGG+AGG - chr1_2:2096857-2096876 None:intergenic 65.0%
CGTGGCGGCACCAAGGTAGA+TGG - chr1_2:2098960-2098979 None:intergenic 65.0%
CCGCTTCTGCCCAGTTGCCA+AGG - chr1_2:2099591-2099610 None:intergenic 65.0%
GTGCCACCTGGTGTTTCGGG+AGG + chr1_2:2100688-2100707 Msa0048990:CDS 65.0%
TGGGGTGGCTGGTGTGGAAC+AGG - chr1_2:2100775-2100794 None:intergenic 65.0%
GGAGGCTGGGGCTGAGTAGT+CGG - chr1_2:2100823-2100842 None:intergenic 65.0%
TACTCAGCCCCAGCCTCCTC+AGG + chr1_2:2100825-2100844 Msa0048990:CDS 65.0%
! GAGGTAGGTGCCGCAACGTG+TGG - chr1_2:2103201-2103220 None:intergenic 65.0%
GGTTGCGGTTGAGGGGGACT+GGG - chr1_2:2103297-2103316 None:intergenic 65.0%
AGGTTGCGGTTGAGGGGGAC+TGG - chr1_2:2103298-2103317 None:intergenic 65.0%
GCAGCCGGTTGCACAGGTTG+CGG - chr1_2:2103312-2103331 None:intergenic 65.0%
GACGGCTCCGGCCATCGTAC+CGG - chr1_2:2091402-2091421 None:intergenic 70.0%
AGGGGCCAGGGTTTGGACCC+CGG + chr1_2:2097520-2097539 Msa0048990:intron 70.0%
GGCTGTTGGGGTGGCTGGTG+TGG - chr1_2:2100781-2100800 None:intergenic 70.0%
TGCGGTTGAGGGGGACTGGG+AGG - chr1_2:2103294-2103313 None:intergenic 70.0%
GGTGCAGCAGCCGGTTGCAC+AGG - chr1_2:2103318-2103337 None:intergenic 70.0%
GGAGCTGCTGGTGCAGCAGC+CGG - chr1_2:2103327-2103346 None:intergenic 70.0%
! GGCGTCAGTCGCACTGGCGC+CGG + chr1_2:2091358-2091377 Msa0048990:CDS 75.0%
CTCGCCGCCGGTACGATGGC+CGG + chr1_2:2091392-2091411 Msa0048990:CDS 75.0%
GGCTCCGGCCATCGTACCGG+CGG - chr1_2:2091399-2091418 None:intergenic 75.0%
GGGGCCAGGGTTTGGACCCC+GGG + chr1_2:2097521-2097540 Msa0048990:intron 75.0%
GGTGCCCGGGGTCCAAACCC+TGG - chr1_2:2097528-2097547 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 2091035 2104545 2091035 ID=Msa0048990;Name=Msa0048990
chr1_2 mRNA 2091035 2104545 2091035 ID=Msa0048990-mRNA-1;Parent=Msa0048990;Name=Msa0048990-mRNA-1;_AED=0.09;_eAED=0.09;_QI=294|0.90|0.86|1|1|1|22|535|1135
chr1_2 exon 2091035 2091645 2091035 ID=Msa0048990-mRNA-1:exon:394;Parent=Msa0048990-mRNA-1
chr1_2 exon 2092970 2093024 2092970 ID=Msa0048990-mRNA-1:exon:395;Parent=Msa0048990-mRNA-1
chr1_2 exon 2093140 2093262 2093140 ID=Msa0048990-mRNA-1:exon:396;Parent=Msa0048990-mRNA-1
chr1_2 exon 2093377 2093473 2093377 ID=Msa0048990-mRNA-1:exon:397;Parent=Msa0048990-mRNA-1
chr1_2 exon 2093582 2093618 2093582 ID=Msa0048990-mRNA-1:exon:398;Parent=Msa0048990-mRNA-1
chr1_2 exon 2093717 2093822 2093717 ID=Msa0048990-mRNA-1:exon:399;Parent=Msa0048990-mRNA-1
chr1_2 exon 2093896 2093953 2093896 ID=Msa0048990-mRNA-1:exon:400;Parent=Msa0048990-mRNA-1
chr1_2 exon 2094578 2094675 2094578 ID=Msa0048990-mRNA-1:exon:401;Parent=Msa0048990-mRNA-1
chr1_2 exon 2094818 2094937 2094818 ID=Msa0048990-mRNA-1:exon:402;Parent=Msa0048990-mRNA-1
chr1_2 exon 2095801 2095903 2095801 ID=Msa0048990-mRNA-1:exon:403;Parent=Msa0048990-mRNA-1
chr1_2 exon 2096141 2096200 2096141 ID=Msa0048990-mRNA-1:exon:404;Parent=Msa0048990-mRNA-1
chr1_2 exon 2096319 2096475 2096319 ID=Msa0048990-mRNA-1:exon:405;Parent=Msa0048990-mRNA-1
chr1_2 exon 2096577 2097132 2096577 ID=Msa0048990-mRNA-1:exon:406;Parent=Msa0048990-mRNA-1
chr1_2 exon 2097255 2097347 2097255 ID=Msa0048990-mRNA-1:exon:407;Parent=Msa0048990-mRNA-1
chr1_2 exon 2099275 2099460 2099275 ID=Msa0048990-mRNA-1:exon:408;Parent=Msa0048990-mRNA-1
chr1_2 exon 2099560 2099773 2099560 ID=Msa0048990-mRNA-1:exon:409;Parent=Msa0048990-mRNA-1
chr1_2 exon 2100462 2100556 2100462 ID=Msa0048990-mRNA-1:exon:410;Parent=Msa0048990-mRNA-1
chr1_2 exon 2100652 2100846 2100652 ID=Msa0048990-mRNA-1:exon:411;Parent=Msa0048990-mRNA-1
chr1_2 exon 2102901 2103023 2102901 ID=Msa0048990-mRNA-1:exon:412;Parent=Msa0048990-mRNA-1
chr1_2 exon 2103108 2103387 2103108 ID=Msa0048990-mRNA-1:exon:413;Parent=Msa0048990-mRNA-1
chr1_2 exon 2103586 2103824 2103586 ID=Msa0048990-mRNA-1:exon:414;Parent=Msa0048990-mRNA-1
chr1_2 exon 2103915 2104545 2103915 ID=Msa0048990-mRNA-1:exon:415;Parent=Msa0048990-mRNA-1
chr1_2 five_prime_UTR 2091035 2091328 2091035 ID=Msa0048990-mRNA-1:five_prime_utr;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2091329 2091645 2091329 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2092970 2093024 2092970 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2093140 2093262 2093140 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2093377 2093473 2093377 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2093582 2093618 2093582 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2093717 2093822 2093717 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2093896 2093953 2093896 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2094578 2094675 2094578 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2094818 2094937 2094818 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2095801 2095903 2095801 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2096141 2096200 2096141 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2096319 2096475 2096319 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2096577 2097132 2096577 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2097255 2097347 2097255 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2099275 2099460 2099275 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2099560 2099773 2099560 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2100462 2100556 2100462 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2100652 2100846 2100652 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2102901 2103023 2102901 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2103108 2103387 2103108 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2103586 2103824 2103586 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 CDS 2103915 2104010 2103915 ID=Msa0048990-mRNA-1:cds;Parent=Msa0048990-mRNA-1
chr1_2 three_prime_UTR 2104011 2104545 2104011 ID=Msa0048990-mRNA-1:three_prime_utr;Parent=Msa0048990-mRNA-1
Gene Sequence

>Msa0048990

ATGGCGTGTATCAAAGGGGTTAATCGATCGGCGTCAGTCGCACTGGCGCCGGATGCACCGTATCTCGCCGCCGGTACGATGGCCGGAGCCGTCGATCTCTCGTTTAGCTCATCGGCGAATCTTGAAATATTCAAGATAGATTTCCAATCCGATGATCCTGAATTGCCTCTTGTTGCGGAATACCCTAGCTCTGATCGGTTTAATCGTCTTTCTTGGGGGAGAAACGGTTCTTCGTCTGAAGATTTCGCTTTTGGTCTTGTTGCTGGTGGATTAGTCGATGGGAATATTGATATTTGGAATCCTCTTGCTCTGATTCGCTCGGAGGAAAATGAAAGTTCTCTCGTTGGGCACCTTGTAAGGCATAAGGGACCGGTTCGTGGTCTTGAGTTTAATTCAATTGCACCTAATCTTCTTGCATCTGGGGCTGAGGATGGTGAAATTTGCATATGGGATTTGGCCAATCCTTTAGAGCCTACACATTTTCCACCATTAAAGGGTAGTGGCTCTGCTTCCCAGGGTGAAGTTTCATTCTTATCTTGGAATAGTAAAGTGCAGCACATATTAGCGTCCACTTCATATAATGGGACCACTGTGGTCTGGGACCTAAAGAAACAAAAGTCAGTGATAAGCGTTGTAGATCCAATTAGACGGCGGTGCTCAGCTTTGCAGTGGCATCCTGATGTTGCTACCCAACTTGCTGTTGCATCAGATGAAGATGGATCTCCTTCTATAAAGCTTTGGGATATGAGGAATACAATGACACCAGTAAAGGAGTTTGTGGGGCACACTAGAGGAGTAATTGCAATGTCATGGTGTCCCAATGATAGCTCTTATTTGCTTACTTGTGGCAAAGATAGCCGAACCATATGCTGGGACACTATTTCTGGAGAGATTGCCTATGAATTGCCAGCTGGAACCAACTGGAACTTTGATGTGCATTGGTATTCTAAGATACCTGGGGTAATATCAGCATCCTCCTTTGATGGAAAAATCGGCATATACAATATTAAGGCAATCTACTTTCCTGCAGATCTCTTTACTGACCATATTATTAATAACATATGTGATTATCTGCAGGGTTGCCGTCAATCTGGAGAGAGTGATTTTGGTGCAGTACCGCTGAGAGCTCCAAAATGGTATAAACGTCCTGTTGGTGCGTCTTTTGGCTTTGGAGTTGAATTCATCCCATTTGTAATTTTCCAGGTTTATGTGCATAACATGGTCACCGAAGACGGTCTGGTGAGTCGTTCATCTGAATTTGAAGCTGCGATACAAAATGGGGAAAGAACTTTGCTAAGGGTTCTATGTGATAAAAAGTCTCAGGAATCAGTATCTGAGGAGGAAAGGGAAACATGGGGCTTTTTGAAGGTTATGTTTGAAGATGATGGAACTGCAAGAACAAAACTTCTCACACACCTTGGTTTCAATGTACCTAGTGAAGAAAAAGACATAGTTAATGATGATCTTTCCCAGGAAATAAATGCTCTTGGACTTGAGGGCACATCTGCTAATAACACAGGACATGTGGCTACTAATGAAGCCAATAATTTCTTTTTGGACAACGGGGAGGATTTCTTTAACAATATTCCCAGTCCCAAAGCTGATACTCCTCCATCTGCGGCTGCTGGCAACTTTGTTGTTGCGGATAATGCAAACGGTTCAGACAAAATCGAAGATGGTGTGGAAGTGGAAGAGAGCAGTGATCCTTCATTTGATGACAGTGTGCAGCGTGCCTTAGTTGTTGGGGACTACAAGGATGCAGTTTCTCAATGCATATCTGCTGATAAATGGGCTGATGCTTTAGTTATTGCTCATGTGGGTAGCACCTCCTTGTGGGAAAGTACACGGGATCAATACCTTAAGAAGAACCGATCACCATACTTAAAGGTTGTATCAGCGATGGTGAGCAATGATCTCTTGAGCCTTGTGAACACCAGGCCTCTAAAATTCTGGAAAGAAACCCTTGCTCTTCTTTGCAGTTTTGCTCAGAGAGATGAATGGACCATGCTTTGCGACACACTTGCTTCAAAACTCATGGGGGCTGGCAATACATTAGCTGCAACACTTTGTTATATATGTGCTGGAAATATTGATAAAACTGTTGAAATTTGGTCAAGGAGCCTGTCGGATGAGCACAAGGGGAAATCTTATGTTGATCTTCTTCAGGATTTGATGGAAAAAACTATTGTTCTTGCCTTGGCAACTGGGCAGAAGCGGTTTAGTGCCTCTCTGTGCAAGCTTGTTGAGAAATATGCTGAAATTTTAGCAAGTCAAGGGTTGCTGACCACAGCAATGGAGTATCTAAAACTTTTGGGTTCTGAAGAACTTTCAACTGAACTTGTGATTTTGAAGGACCGAATTGCACTGTCTACAGAAACTGAGAAAGACTTAAAGACCACTGCTTTTGAAAATTCTCAATCACACGGTGGATCCTATTATGGTGCTGATAATTCCAATTATGTGAATCATTACCAGGGTTCAGTATCCACTCATGTGCCGCCTGGTGTTCATGTGCCACCTGGTGTTTCGGGAGGTCAATATCCTGATAGCTATCAGCCGCCATATGATAATAGATATGTGCCTGGATATGGTGCTCCTGTTCCACACCAGCCACCCCAACAGCCCAATATATTTGTTCCATCACCGACTACTCAGCCCCAGCCTCCTCAGTCAAACTTCCCAAATACTTCCGGGGCACAACCTCCTGTGAGAGTATTTGAACCTCAAACTCCTGCTTTGATTAGAAATCCAGAGCAATATCAGCAGCCAACATTGGGTTCTCAATTGTATAATACAAACAACAATCCAACTTTCCCGCCTACCAATCAACCTTACCAGCCTACACCTCCTGCTCCATCTCACATTGGTCATGGCCCGAACTTACCACACGTTGCGGCACCTACCTCAAATCCAATTGGATTCATGCAAACCCCTAGTTCTGCTGGTGTTCAAAGACCTGGGGTGGGATCAATTCAACCTCCCAGTCCCCCTCAACCGCAACCTGTGCAACCGGCTGCTGCACCAGCAGCTCCACCACCTACTGTGCAGACTGCTGATACTTCAAAAGTACCTGCACAACAAATGCCTATCGTCACATCATTGACAAGGCTTTTCAATGAGACATCGGAAGCACTGGGAGGTTCACGTGCAAACCCAGCAAAGAAGCGGGAGATAGAAGACAACTCAAAGAGACTTGGTGGGTTGTTTGCGAAGTTGAACAGTGGGGACATCTCCAAAAATGCTTCTGATAAGCTCCTTCAGCTTTGTCAGGCGTTAGACAATGGTGATTTTGGTACTGCCCTTCAAATTCAGGTTCATCTGACTACTACTGAATGGGATGAATGCCAGTCCTGGTTAGGTTCACTGAAGCGAATGATCAAGACAAAGCAGAGTGTGAGATTGAGTTAA
Protein sequence

>Msa0048990

MACIKGVNRSASVALAPDAPYLAAGTMAGAVDLSFSSSANLEIFKIDFQSDDPELPLVAEYPSSDRFNRLSWGRNGSSSEDFAFGLVAGGLVDGNIDIWNPLALIRSEENESSLVGHLVRHKGPVRGLEFNSIAPNLLASGAEDGEICIWDLANPLEPTHFPPLKGSGSASQGEVSFLSWNSKVQHILASTSYNGTTVVWDLKKQKSVISVVDPIRRRCSALQWHPDVATQLAVASDEDGSPSIKLWDMRNTMTPVKEFVGHTRGVIAMSWCPNDSSYLLTCGKDSRTICWDTISGEIAYELPAGTNWNFDVHWYSKIPGVISASSFDGKIGIYNIKAIYFPADLFTDHIINNICDYLQGCRQSGESDFGAVPLRAPKWYKRPVGASFGFGVEFIPFVIFQVYVHNMVTEDGLVSRSSEFEAAIQNGERTLLRVLCDKKSQESVSEEERETWGFLKVMFEDDGTARTKLLTHLGFNVPSEEKDIVNDDLSQEINALGLEGTSANNTGHVATNEANNFFLDNGEDFFNNIPSPKADTPPSAAAGNFVVADNANGSDKIEDGVEVEESSDPSFDDSVQRALVVGDYKDAVSQCISADKWADALVIAHVGSTSLWESTRDQYLKKNRSPYLKVVSAMVSNDLLSLVNTRPLKFWKETLALLCSFAQRDEWTMLCDTLASKLMGAGNTLAATLCYICAGNIDKTVEIWSRSLSDEHKGKSYVDLLQDLMEKTIVLALATGQKRFSASLCKLVEKYAEILASQGLLTTAMEYLKLLGSEELSTELVILKDRIALSTETEKDLKTTAFENSQSHGGSYYGADNSNYVNHYQGSVSTHVPPGVHVPPGVSGGQYPDSYQPPYDNRYVPGYGAPVPHQPPQQPNIFVPSPTTQPQPPQSNFPNTSGAQPPVRVFEPQTPALIRNPEQYQQPTLGSQLYNTNNNPTFPPTNQPYQPTPPAPSHIGHGPNLPHVAAPTSNPIGFMQTPSSAGVQRPGVGSIQPPSPPQPQPVQPAAAPAAPPPTVQTADTSKVPAQQMPIVTSLTRLFNETSEALGGSRANPAKKREIEDNSKRLGGLFAKLNSGDISKNASDKLLQLCQALDNGDFGTALQIQVHLTTTEWDECQSWLGSLKRMIKTKQSVRLS*