AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0676690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0676690 MtrunA17_Chr4g0020111 93.283 789 10 3 1 746 336 1124 0.0 1494
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0676690 AT3G63460.1 55.501 809 255 19 1 744 336 1104 0.0 756
Msa0676690 AT3G63460.3 55.820 799 258 19 1 744 336 1094 0.0 752
Msa0676690 AT3G63460.2 55.266 807 258 18 1 744 336 1102 0.0 751
Msa0676690 AT1G18830.2 44.401 768 274 19 1 744 325 963 3.78e-179 538
Msa0676690 AT1G18830.3 44.401 768 274 19 1 744 325 963 3.78e-179 538
Msa0676690 AT1G18830.1 44.186 774 273 19 1 744 325 969 1.65e-178 536

Find 234 sgRNAs with CRISPR-Local

Find 788 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTGTGCCCCGGAAGTATT+TGG 0.189839 4_4:-27869506 None:intergenic
AATGCATATCTGCTGATAAA+TGG 0.195041 4_4:+27862836 Msa0676690:CDS
AATGGAGTATCTAAAACTTT+TGG 0.202420 4_4:+27865508 Msa0676690:CDS
TTGATAAAACTGTTGAAATT+TGG 0.223237 4_4:+27865206 Msa0676690:CDS
GCGTTAGACAATGGTGATTT+TGG 0.229013 4_4:+27870379 Msa0676690:CDS
ACAGGACGTTTATACCATTT+TGG 0.235325 4_4:-27861979 None:intergenic
TCTATCTCCCGCTTCTTTGC+TGG 0.236007 4_4:-27870262 None:intergenic
TTTGAAGCTGCGATACAAAA+TGG 0.240144 4_4:+27862226 Msa0676690:CDS
TGGTACTGCCCTTCAAATTC+AGG 0.241388 4_4:+27870399 Msa0676690:CDS
ATCTAGAGGCAGTAGTCTTT+TGG 0.248558 4_4:-27870695 None:intergenic
CGGTGATGGAACAAATATAT+TGG 0.251317 4_4:-27866620 None:intergenic
CGTCCTGTTGGTGCGTCTTT+TGG 0.252389 4_4:+27861994 Msa0676690:CDS
CAATCTGGAGAGAGTGATTT+TGG 0.253431 4_4:+27861696 Msa0676690:CDS
ATTGTTCTTGCCTTGGCAAC+TGG 0.276135 4_4:+27865401 Msa0676690:CDS
AGATTGAAGGTGCAGGGTTT+TGG 0.277648 4_4:+27870714 Msa0676690:three_prime_UTR
CATGTGCCACCTGGTGTTTC+GGG 0.281081 4_4:+27866505 Msa0676690:CDS
TATATATTGTTAGGATTTGA+TGG 0.284496 4_4:+27865370 Msa0676690:intron
GGAATTATCAGCACCATAAT+AGG 0.287567 4_4:-27866333 None:intergenic
ATCTTATGTTGATCTTCTTC+AGG 0.300841 4_4:+27865261 Msa0676690:CDS
TGCTACATTATTCAATTGTT+TGG 0.311644 4_4:-27871049 None:intergenic
CTGGTAATGATTCACATAAT+TGG 0.314179 4_4:-27866354 None:intergenic
GAACCGATCACCATACTTAA+AGG 0.315500 4_4:+27862933 Msa0676690:CDS
TGGGGTGGCTGGTGTGGAAC+AGG 0.325565 4_4:-27866592 None:intergenic
AACAAATATATTGGGCTGTT+GGG 0.325988 4_4:-27866611 None:intergenic
GGTTGCACAGGTTGCGGTTG+AGG 0.331020 4_4:-27869899 None:intergenic
ACACCAGGCCTCTAAAATTC+TGG 0.331796 4_4:+27863120 Msa0676690:CDS
TCATGTGCCACCTGGTGTTT+CGG 0.332149 4_4:+27866504 Msa0676690:CDS
GTCCAAGAGCATTTATTTCC+TGG 0.339697 4_4:-27862539 None:intergenic
GGCTGTTGGGGTGGCTGGTG+TGG 0.347713 4_4:-27866598 None:intergenic
TATTGGGCTGTTGGGGTGGC+TGG 0.348166 4_4:-27866603 None:intergenic
TCACACGGTGGATCCTATTA+TGG 0.350516 4_4:+27866320 Msa0676690:CDS
GCCGCAACGTGTGGTAAGTT+CGG 0.351760 4_4:-27869785 None:intergenic
CTATCTCCCGCTTCTTTGCT+GGG 0.363876 4_4:-27870261 None:intergenic
GTTGCACAGGTTGCGGTTGA+GGG 0.365086 4_4:-27869898 None:intergenic
TCAAACTTCCCAAATACTTC+CGG 0.377652 4_4:+27869497 Msa0676690:CDS
AATAGATATGTGCCTGGATA+TGG 0.378491 4_4:+27866565 Msa0676690:CDS
TGCAGCGTGCCTTAGTTGTT+GGG 0.394783 4_4:+27862791 Msa0676690:intron
ATATCAACTACCTTTAAGTA+TGG 0.398810 4_4:-27862943 None:intergenic
CATGAATCCAATTGGATTTG+AGG 0.406068 4_4:-27869813 None:intergenic
CTGCAGGGTTGCCGTCAATC+TGG 0.408603 4_4:+27861681 Msa0676690:intron
ATTGCACTGTCTACAGAAAC+TGG 0.412494 4_4:+27865575 Msa0676690:CDS
TCCAAGAGCATTTATTTCCT+GGG 0.416970 4_4:-27862538 None:intergenic
TACCGCTGAGAGCTCCAAAA+TGG 0.419641 4_4:+27861965 Msa0676690:CDS
AAGGTTATGTTTGAAGATGA+TGG 0.419652 4_4:+27862435 Msa0676690:CDS
TCCCAGGAAATAAATGCTCT+TGG 0.421532 4_4:+27862537 Msa0676690:CDS
GGGGTTTGCATGAATCCAAT+TGG 0.425135 4_4:-27869821 None:intergenic
TTGAAGCTGCGATACAAAAT+GGG 0.425431 4_4:+27862227 Msa0676690:CDS
TCCCCTTGTGCTCATCCGAC+AGG 0.426401 4_4:-27865237 None:intergenic
ATGGTGATCGGTTCTTCTTA+AGG 0.426721 4_4:-27862924 None:intergenic
CAATGAGACATCGGAAGCAC+TGG 0.427338 4_4:+27870222 Msa0676690:CDS
AACACTTCTATTACAAATGT+TGG 0.430549 4_4:-27870858 None:intergenic
ACAGTAGGTGGTGGAGCTGC+TGG 0.431026 4_4:-27869932 None:intergenic
ATTGACTTACCTGAATTTGA+AGG 0.431108 4_4:-27870408 None:intergenic
GACTACTGCCTCTAGATTGA+AGG 0.437916 4_4:+27870701 Msa0676690:three_prime_UTR
CTAATCAAAGCAGGAGTTTG+AGG 0.438681 4_4:-27869548 None:intergenic
CAAACTTCCCAAATACTTCC+GGG 0.438686 4_4:+27869498 Msa0676690:CDS
GGAGCTGCTGGTGCAGCAGC+CGG 0.439563 4_4:-27869920 None:intergenic
GGTGATGGAACAAATATATT+GGG 0.440504 4_4:-27866619 None:intergenic
GCAGCCGGTTGCACAGGTTG+CGG 0.443676 4_4:-27869905 None:intergenic
GTTGTGCCCCGGAAGTATTT+GGG 0.444056 4_4:-27869505 None:intergenic
TCAACCGCAACCTGTGCAAC+CGG 0.444750 4_4:+27869901 Msa0676690:CDS
TGATTGGTAGGCGGGAAAGT+TGG 0.445971 4_4:-27869716 None:intergenic
CACACTTGCTTCAAAACTCA+TGG 0.449916 4_4:+27865132 Msa0676690:CDS
GTTGGCTGCTGATATTGCTC+TGG 0.450535 4_4:-27869575 None:intergenic
ACTCCTCCATCTGCGGCTGC+TGG 0.451424 4_4:+27862673 Msa0676690:CDS
CTTAGTTGTTGGGGACTACA+AGG 0.452508 4_4:+27862801 Msa0676690:CDS
GATAATGTACCTGAGGAGGC+TGG 0.455712 4_4:-27866654 None:intergenic
CTTTGAACACCAGCAGAACT+AGG 0.456093 4_4:-27869842 None:intergenic
TCTGCTGGTGTTCAAAGACC+TGG 0.456847 4_4:+27869848 Msa0676690:CDS
GAACAAATATATTGGGCTGT+TGG 0.463838 4_4:-27866612 None:intergenic
GATGAATGCCAGTCCTGGTT+AGG 0.464830 4_4:+27870535 Msa0676690:CDS
ATGCATATCTGCTGATAAAT+GGG 0.466093 4_4:+27862837 Msa0676690:CDS
CAATTATGTGAATCATTACC+AGG 0.466289 4_4:+27866355 Msa0676690:CDS
TACTCAGCCCCAGCCTCCTC+AGG 0.466843 4_4:+27866645 Msa0676690:CDS
GGCACATATCTATTATCATA+TGG 0.467597 4_4:-27866556 None:intergenic
ACGACTCACCAGACCGTCTT+CGG 0.467782 4_4:-27862194 None:intergenic
GCAGGAGGTGTAGGCTGGTA+AGG 0.470481 4_4:-27869740 None:intergenic
TGTAGGCTGGTAAGGTTGAT+TGG 0.470667 4_4:-27869732 None:intergenic
TGCCTCTAGATTGAAGGTGC+AGG 0.470914 4_4:+27870707 Msa0676690:three_prime_UTR
GGTGCAGCAGCCGGTTGCAC+AGG 0.472005 4_4:-27869911 None:intergenic
GCACCTACCTCAAATCCAAT+TGG 0.472269 4_4:+27869806 Msa0676690:CDS
ATAAATGCTCTTGGACTTGA+GGG 0.472750 4_4:+27862546 Msa0676690:CDS
TGTGGGTAGCACCTCCTTGT+GGG 0.472966 4_4:+27862882 Msa0676690:CDS
TGCTTTAGTTATTGCTCATG+TGG 0.472998 4_4:+27862864 Msa0676690:CDS
TTCATCTGACTACTACTGAA+TGG 0.476275 4_4:+27870512 Msa0676690:CDS
TGGCAGATCTGAGGAGGAAA+GGG 0.477260 4_4:+27862395 Msa0676690:intron
TATGGCGGCTGATAGCTATC+AGG 0.477974 4_4:-27866538 None:intergenic
CCGCAACGTGTGGTAAGTTC+GGG 0.478470 4_4:-27869784 None:intergenic
CTGAGGAGGAAAGGGAAACA+TGG 0.478766 4_4:+27862403 Msa0676690:CDS
TAAGCTCCTTCAGCTTTGTC+AGG 0.481282 4_4:+27870357 Msa0676690:CDS
TGCTGGCAACTTTGTTGTTG+CGG 0.484143 4_4:+27862690 Msa0676690:CDS
GGTAAGGTTGATTGGTAGGC+GGG 0.485124 4_4:-27869724 None:intergenic
TCATCTGACTACTACTGAAT+GGG 0.485486 4_4:+27870513 Msa0676690:CDS
GTGCAGCGTGCCTTAGTTGT+TGG 0.485780 4_4:+27862790 Msa0676690:intron
TGGTGTTCAAAGACCTGGGG+TGG 0.487048 4_4:+27869853 Msa0676690:CDS
ATGCAAACCCCTAGTTCTGC+TGG 0.491193 4_4:+27869833 Msa0676690:CDS
TTGCACAGGTTGCGGTTGAG+GGG 0.492712 4_4:-27869897 None:intergenic
AAGCCAAAAGACGCACCAAC+AGG 0.493842 4_4:-27861997 None:intergenic
ATAATGTACCTGAGGAGGCT+GGG 0.494196 4_4:-27866653 None:intergenic
CAATATCAGCAGCCAACATT+GGG 0.495585 4_4:+27869581 Msa0676690:CDS
CCTTGGCAACTGGGCAGAAG+CGG 0.496888 4_4:+27865411 Msa0676690:CDS
TTGTTCTTGCCTTGGCAACT+GGG 0.502136 4_4:+27865402 Msa0676690:CDS
CTGCTGGTGTTCAAAGACCT+GGG 0.505096 4_4:+27869849 Msa0676690:CDS
GCCTCTAGATTGAAGGTGCA+GGG 0.507434 4_4:+27870708 Msa0676690:three_prime_UTR
ACACTTGCTTCAAAACTCAT+GGG 0.507512 4_4:+27865133 Msa0676690:CDS
AATCGAAGATGGTGTGGAAG+TGG 0.507656 4_4:+27862735 Msa0676690:CDS
GTATCCACTCATGTGCCGCC+TGG 0.507681 4_4:+27866478 Msa0676690:CDS
GCTCCATCTCACATTGGTCA+TGG 0.510684 4_4:+27869761 Msa0676690:CDS
AATCACTCTCTCCAGATTGA+CGG 0.512006 4_4:-27861692 None:intergenic
CTTGTAGTCCCCAACAACTA+AGG 0.513558 4_4:-27862800 None:intergenic
CCTGGTGTTCATGTGCCACC+TGG 0.514635 4_4:+27866496 Msa0676690:CDS
CATGGTCACCGAAGACGGTC+TGG 0.516956 4_4:+27862186 Msa0676690:CDS
GCAATATCAGCAGCCAACAT+TGG 0.517008 4_4:+27869580 Msa0676690:CDS
ATGTGGGTAGCACCTCCTTG+TGG 0.518685 4_4:+27862881 Msa0676690:CDS
ATGGGGAAAGAACTTTGCTA+AGG 0.522620 4_4:+27862245 Msa0676690:CDS
TGCAAACCCAGCAAAGAAGC+GGG 0.523933 4_4:+27870255 Msa0676690:CDS
ACAAAACTTCTCACACACCT+TGG 0.525396 4_4:+27862468 Msa0676690:CDS
GACAACTCAAAGAGACTTGG+TGG 0.526126 4_4:+27870286 Msa0676690:CDS
TTTGAACACCAGCAGAACTA+GGG 0.527521 4_4:-27869841 None:intergenic
CCAGGTTTATGTGCATAACA+TGG 0.528026 4_4:+27862168 Msa0676690:intron
TGAGGTTCAAATACTCTCAC+AGG 0.528455 4_4:-27869530 None:intergenic
AGATGGAGGAGTATCAGCTT+TGG 0.528467 4_4:-27862662 None:intergenic
AAGTTGCCAGCAGCCGCAGA+TGG 0.529794 4_4:-27862679 None:intergenic
GGTTGAATTGATCCCACCCC+AGG 0.529996 4_4:-27869866 None:intergenic
TCGCTTCAGTGAACCTAACC+AGG 0.532419 4_4:-27870548 None:intergenic
TTTCTGTAGACAGTGCAATT+CGG 0.533051 4_4:-27865571 None:intergenic
TGCACAGGTTGCGGTTGAGG+GGG 0.534203 4_4:-27869896 None:intergenic
ACACTTTGTTATATATGTGC+TGG 0.534366 4_4:+27865178 Msa0676690:CDS
GTTGTTGCGGATAATGCAAA+CGG 0.538258 4_4:+27862703 Msa0676690:CDS
TCTGGATTTCTAATCAAAGC+AGG 0.539058 4_4:-27869557 None:intergenic
ATGGAGCAGGAGGTGTAGGC+TGG 0.541797 4_4:-27869745 None:intergenic
TTGCCAGCAGCCGCAGATGG+AGG 0.543716 4_4:-27862676 None:intergenic
AATAAATGCTCTTGGACTTG+AGG 0.546970 4_4:+27862545 Msa0676690:CDS
CCAGGTGGCACATGAACACC+AGG 0.547385 4_4:-27866496 None:intergenic
TACAATTGAGAACCCAATGT+TGG 0.548964 4_4:-27869593 None:intergenic
CCGCTTCTGCCCAGTTGCCA+AGG 0.549646 4_4:-27865411 None:intergenic
CATAACATGGTCACCGAAGA+CGG 0.552662 4_4:+27862181 Msa0676690:CDS
GTATCAGCAGTCTGCACAGT+AGG 0.554249 4_4:-27869947 None:intergenic
ACAAATATATTGGGCTGTTG+GGG 0.554458 4_4:-27866610 None:intergenic
ATGGCAGATCTGAGGAGGAA+AGG 0.555795 4_4:+27862394 Msa0676690:intron
GGAACAGGAGCACCATATCC+AGG 0.557146 4_4:-27866577 None:intergenic
TATGATAATAGATATGTGCC+TGG 0.558314 4_4:+27866559 Msa0676690:CDS
GAGCCTGTCGGATGAGCACA+AGG 0.560286 4_4:+27865234 Msa0676690:CDS
GCTTTAGTTATTGCTCATGT+GGG 0.560611 4_4:+27862865 Msa0676690:CDS
TCTTGAGCCTTGTGAACACC+AGG 0.563652 4_4:+27863105 Msa0676690:CDS
TGACCAATGTGAGATGGAGC+AGG 0.564121 4_4:-27869758 None:intergenic
CCTCCTTGTGGGAAAGTACA+CGG 0.566304 4_4:+27862893 Msa0676690:CDS
TGCACACTGTCATCAAATGA+AGG 0.567213 4_4:-27862772 None:intergenic
TGTTTGCGAAGTTGAACAGT+GGG 0.567851 4_4:+27870311 Msa0676690:CDS
AGTTAATGATGATCTTTCCC+AGG 0.568244 4_4:+27862521 Msa0676690:CDS
GCAGTCTGCACAGTAGGTGG+TGG 0.569747 4_4:-27869941 None:intergenic
TGGGGAAAGAACTTTGCTAA+GGG 0.570294 4_4:+27862246 Msa0676690:CDS
TTAGAGGCCTGGTGTTCACA+AGG 0.571264 4_4:-27863112 None:intergenic
AGCAAGTGTGTCGCAAAGCA+TGG 0.571471 4_4:-27865119 None:intergenic
AATCCAATTGGATTTGAGGT+AGG 0.571565 4_4:-27869809 None:intergenic
AATATATTGGGCTGTTGGGG+TGG 0.573545 4_4:-27866607 None:intergenic
CCACACCCCTCTGGTACCAA+TGG 0.574372 4_4:+27870926 Msa0676690:three_prime_UTR
GGAGGCTGGGGCTGAGTAGT+CGG 0.575306 4_4:-27866640 None:intergenic
TCAGTGAACCTAACCAGGAC+TGG 0.576182 4_4:-27870543 None:intergenic
AGGGTTGCTGACCACAGCAA+TGG 0.577792 4_4:+27865490 Msa0676690:CDS
GCCTGTCGGATGAGCACAAG+GGG 0.578356 4_4:+27865236 Msa0676690:CDS
GGCTGGTAAGGTTGATTGGT+AGG 0.578536 4_4:-27869728 None:intergenic
TAATGTACCTGAGGAGGCTG+GGG 0.578752 4_4:-27866652 None:intergenic
CTTTGTCAGGCGTTAGACAA+TGG 0.579488 4_4:+27870370 Msa0676690:CDS
TGAGGAGGAAAGGGAAACAT+GGG 0.583309 4_4:+27862404 Msa0676690:CDS
GGTGTTCAAAGACCTGGGGT+GGG 0.586052 4_4:+27869854 Msa0676690:CDS
TTGTTATGGCAGATCTGAGG+AGG 0.586932 4_4:+27862389 Msa0676690:intron
AGACAAAATCGAAGATGGTG+TGG 0.591708 4_4:+27862729 Msa0676690:CDS
TGAGATGGAGCAGGAGGTGT+AGG 0.593576 4_4:-27869749 None:intergenic
CACTTGCTTCAAAACTCATG+GGG 0.594256 4_4:+27865134 Msa0676690:CDS
TGCTGGTGTTCAAAGACCTG+GGG 0.595525 4_4:+27869850 Msa0676690:CDS
GGGCCATGACCAATGTGAGA+TGG 0.595587 4_4:-27869764 None:intergenic
GCATCACCATTGGTACCAGA+GGG 0.595823 4_4:-27870932 None:intergenic
AAATGGTATAAACGTCCTGT+TGG 0.596215 4_4:+27861982 Msa0676690:CDS
AATGGGATGAATGCCAGTCC+TGG 0.596743 4_4:+27870530 Msa0676690:CDS
TTGACTTACCTGAATTTGAA+GGG 0.596880 4_4:-27870407 None:intergenic
TAACCGACACTAGAACAGCT+TGG 0.596921 4_4:-27870956 None:intergenic
CTTGTCAATGATGTGACGAT+AGG 0.599436 4_4:-27870193 None:intergenic
TTATTGTTATGGCAGATCTG+AGG 0.600704 4_4:+27862386 Msa0676690:intron
AAACTGTTGAAATTTGGTCA+AGG 0.601007 4_4:+27865212 Msa0676690:CDS
ACAGCTTGGAGCATCACCAT+TGG 0.601613 4_4:-27870942 None:intergenic
AGCTGATACTCCTCCATCTG+CGG 0.601962 4_4:+27862666 Msa0676690:CDS
AACACCAGGCGGCACATGAG+TGG 0.604543 4_4:-27866482 None:intergenic
GGTTCAGACAAAATCGAAGA+TGG 0.604622 4_4:+27862724 Msa0676690:CDS
AATGAGACATCGGAAGCACT+GGG 0.606396 4_4:+27870223 Msa0676690:CDS
CTACCTTTAAGTATGGTGAT+CGG 0.607964 4_4:-27862936 None:intergenic
GCTCCAAGCTGTTCTAGTGT+CGG 0.608970 4_4:+27870953 Msa0676690:three_prime_UTR
TGGGGCTGAGTAGTCGGTGA+TGG 0.609730 4_4:-27866634 None:intergenic
GAGGTAGGTGCCGCAACGTG+TGG 0.610907 4_4:-27869794 None:intergenic
TCTCACAGGAGGTTGTGCCC+CGG 0.613180 4_4:-27869516 None:intergenic
TACACTGCAAAGAAGAGCAA+GGG 0.615885 4_4:-27863150 None:intergenic
TATTGACCTCCCGAAACACC+AGG 0.617966 4_4:-27866514 None:intergenic
CACTAGGTACATTGAAACCA+AGG 0.618104 4_4:-27862485 None:intergenic
CCCGAACTTACCACACGTTG+CGG 0.618481 4_4:+27869784 Msa0676690:CDS
CTCCTTGTGGGAAAGTACAC+GGG 0.618650 4_4:+27862894 Msa0676690:CDS
GAAGACAACTCAAAGAGACT+TGG 0.620316 4_4:+27870283 Msa0676690:CDS
GCTGATACTTCAAAAGTACC+TGG 0.620679 4_4:+27869962 Msa0676690:CDS
GTGCAAACCCAGCAAAGAAG+CGG 0.621744 4_4:+27870254 Msa0676690:CDS
GCAGCGTGCCTTAGTTGTTG+GGG 0.623583 4_4:+27862792 Msa0676690:intron
TCAGCAGTCTGCACAGTAGG+TGG 0.627327 4_4:-27869944 None:intergenic
GTGCCACCTGGTGTTTCGGG+AGG 0.627994 4_4:+27866508 Msa0676690:CDS
AGCATCACCATTGGTACCAG+AGG 0.629497 4_4:-27870933 None:intergenic
CTATCGTCACATCATTGACA+AGG 0.630541 4_4:+27870194 Msa0676690:CDS
CTAACGCCTGACAAAGCTGA+AGG 0.632091 4_4:-27870363 None:intergenic
ACCCTGCACCTTCAATCTAG+AGG 0.632949 4_4:-27870709 None:intergenic
AGTTTGCTCAGAGAGATGAA+TGG 0.633225 4_4:+27865095 Msa0676690:intron
TTACACTGCAAAGAAGAGCA+AGG 0.635747 4_4:-27863151 None:intergenic
TTGAACACCAGCAGAACTAG+GGG 0.636185 4_4:-27869840 None:intergenic
ATCCCGTGTACTTTCCCACA+AGG 0.639085 4_4:-27862896 None:intergenic
CCATTGGTACCAGAGGGGTG+TGG 0.641849 4_4:-27870926 None:intergenic
CCTCCTGCTCCATCTCACAT+TGG 0.644143 4_4:+27869755 Msa0676690:CDS
ACAACTCAAAGAGACTTGGT+GGG 0.658321 4_4:+27870287 Msa0676690:CDS
GGCACATCTGCTAATAACAC+AGG 0.659098 4_4:+27862567 Msa0676690:CDS
CTCAACAAGCTTGCACAGAG+AGG 0.663580 4_4:-27865441 None:intergenic
GGTTCAAATACTCTCACAGG+AGG 0.663986 4_4:-27869527 None:intergenic
TGGTAAGGTTGATTGGTAGG+CGG 0.668224 4_4:-27869725 None:intergenic
TGAAGCTGCGATACAAAATG+GGG 0.668775 4_4:+27862228 Msa0676690:CDS
TTTGAAAATTCTCAATCACA+CGG 0.668908 4_4:+27866305 Msa0676690:CDS
ATATGATAATGTACCTGAGG+AGG 0.673000 4_4:-27866658 None:intergenic
ACATATCTATTATCATATGG+CGG 0.674313 4_4:-27866553 None:intergenic
TTGTTTGCGAAGTTGAACAG+TGG 0.681960 4_4:+27870310 Msa0676690:CDS
GAAAATTCTCAATCACACGG+TGG 0.695077 4_4:+27866308 Msa0676690:CDS
AATTTGGTCAAGGAGCCTGT+CGG 0.698497 4_4:+27865222 Msa0676690:CDS
CCGTGTACTTTCCCACAAGG+AGG 0.701277 4_4:-27862893 None:intergenic
AAACTTCCCAAATACTTCCG+GGG 0.701878 4_4:+27869499 Msa0676690:CDS
CCAATGTGAGATGGAGCAGG+AGG 0.712196 4_4:-27869755 None:intergenic
ACTTGCTTCAAAACTCATGG+GGG 0.722564 4_4:+27865135 Msa0676690:CDS
GTTTGCGAAGTTGAACAGTG+GGG 0.732513 4_4:+27870312 Msa0676690:CDS
GGTGGCACATGAACACCAGG+CGG 0.736298 4_4:-27866493 None:intergenic
GAGGAGGAAAGGGAAACATG+GGG 0.738395 4_4:+27862405 Msa0676690:CDS
GAGACATCGGAAGCACTGGG+AGG 0.751405 4_4:+27870226 Msa0676690:CDS
AGCCTGTCGGATGAGCACAA+GGG 0.756736 4_4:+27865235 Msa0676690:CDS
TGACCTCCCGAAACACCAGG+TGG 0.768090 4_4:-27866511 None:intergenic
CATCACCATTGGTACCAGAG+GGG 0.773527 4_4:-27870931 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATAAAAAAAAATTT+TGG + chr4_4:27867389-27867408 Msa0676690:intron 0.0%
!!! TTTTTATAAAAAAAAATTTT+GGG + chr4_4:27867390-27867409 Msa0676690:intron 0.0%
!!! TTTTGAATTTTTTACATTTT+AGG + chr4_4:27861599-27861618 Msa0676690:intron 10.0%
!! ATAAATTTCTTGTTAATTTA+AGG + chr4_4:27863429-27863448 Msa0676690:intron 10.0%
!!! TTTTGTTTTTATTTTATTAG+GGG - chr4_4:27866780-27866799 None:intergenic 10.0%
!! ATTTAAATTGAAAATAAGAT+CGG + chr4_4:27866824-27866843 Msa0676690:intron 10.0%
!! ATATATAATCAAATATGTTA+TGG + chr4_4:27867033-27867052 Msa0676690:intron 10.0%
!! AAATAATTAAAGAAGAAAAA+TGG + chr4_4:27867135-27867154 Msa0676690:intron 10.0%
!!! AAATATCTTTTATATATAAG+TGG - chr4_4:27867358-27867377 None:intergenic 10.0%
!! TAAAATAAAATGTTTATACA+AGG - chr4_4:27869289-27869308 None:intergenic 10.0%
!! AAATGTAAAAAATTCAAAAC+AGG - chr4_4:27861598-27861617 None:intergenic 15.0%
!! CACATATGTTATTAATAATA+TGG - chr4_4:27861656-27861675 None:intergenic 15.0%
!!! TGTATGTTTTCTTTTTTTTT+TGG + chr4_4:27861859-27861878 Msa0676690:intron 15.0%
!! ACAAGAAATTTATTTATTCT+TGG - chr4_4:27863422-27863441 None:intergenic 15.0%
!! ATTGTAGAAATTAATCAATT+GGG - chr4_4:27863577-27863596 None:intergenic 15.0%
!! AATTGTAGAAATTAATCAAT+TGG - chr4_4:27863578-27863597 None:intergenic 15.0%
!!! TTGATACTTTTATTTGTAAT+TGG + chr4_4:27865289-27865308 Msa0676690:intron 15.0%
!! ATACCGAAAAAAATAATAAT+TGG + chr4_4:27865862-27865881 Msa0676690:intron 15.0%
!!! TCACCAATTATTATTTTTTT+CGG - chr4_4:27865868-27865887 None:intergenic 15.0%
!! TTAAAATAATTCAGTGTAAA+TGG + chr4_4:27866036-27866055 Msa0676690:intron 15.0%
!! AAAAAAAGTGAAGAAATTAT+GGG - chr4_4:27866233-27866252 None:intergenic 15.0%
!! AAAAAAAAGTGAAGAAATTA+TGG - chr4_4:27866234-27866253 None:intergenic 15.0%
!! GAAAAATGAATATAGAAAAA+CGG + chr4_4:27867163-27867182 Msa0676690:intron 15.0%
!!! TTAGATTTAGGATAAAAATT+GGG + chr4_4:27868724-27868743 Msa0676690:intron 15.0%
!! CAAAAATTATATCAAAGAAA+AGG - chr4_4:27870995-27871014 None:intergenic 15.0%
!! TATGATAGTAACTTATTTGA+TGG - chr4_4:27861766-27861785 None:intergenic 20.0%
!!! AATAATTTCTTTTTGGACAA+CGG + chr4_4:27862612-27862631 Msa0676690:intron 20.0%
!! TACAAAAACAAATATCTTGT+TGG - chr4_4:27863022-27863041 None:intergenic 20.0%
!! AGTTGTCTAAATTGATTAAA+AGG + chr4_4:27863214-27863233 Msa0676690:intron 20.0%
!! GTTGTCTAAATTGATTAAAA+GGG + chr4_4:27863215-27863234 Msa0676690:intron 20.0%
!! TGGAAAACAGAAATATTTAT+TGG + chr4_4:27863511-27863530 Msa0676690:intron 20.0%
!! AGATAAAGAAAAAGAATCAA+AGG - chr4_4:27864421-27864440 None:intergenic 20.0%
!!! AAACAAATTAGTTTGTTGAT+AGG - chr4_4:27864840-27864859 None:intergenic 20.0%
!! TTGATAAAACTGTTGAAATT+TGG + chr4_4:27865206-27865225 Msa0676690:CDS 20.0%
!! TATATATTGTTAGGATTTGA+TGG + chr4_4:27865370-27865389 Msa0676690:intron 20.0%
!! ATAGAGGAAAATAGTAAAAA+TGG + chr4_4:27865639-27865658 Msa0676690:intron 20.0%
!!! ACATAATCATTTTGATATGA+AGG + chr4_4:27866112-27866131 Msa0676690:intron 20.0%
!!! AATTTTATACGATAAGTATG+AGG + chr4_4:27866943-27866962 Msa0676690:intron 20.0%
!! AAATATGTTATGGAGAATTT+GGG + chr4_4:27867043-27867062 Msa0676690:intron 20.0%
!! CATAATTTATTATGGATTTG+AGG - chr4_4:27867083-27867102 None:intergenic 20.0%
!!! CTTTTCTCTTTTCTTTTATT+TGG - chr4_4:27867226-27867245 None:intergenic 20.0%
!! ATATGCATATAAAATAGCAT+AGG + chr4_4:27867666-27867685 Msa0676690:intron 20.0%
!!! TTTAGTTGATGTTTTCTTTA+GGG - chr4_4:27868569-27868588 None:intergenic 20.0%
!!! TTTTAGTTGATGTTTTCTTT+AGG - chr4_4:27868570-27868589 None:intergenic 20.0%
!!! GTTAGATTTAGGATAAAAAT+TGG + chr4_4:27868723-27868742 Msa0676690:intron 20.0%
!!! ATAGCTATACGTATATTTTA+TGG - chr4_4:27868969-27868988 None:intergenic 20.0%
!!! TTTTGCTTTATTTTTGTTGT+TGG + chr4_4:27869197-27869216 Msa0676690:intron 20.0%
!! AATAAAATGTTTATACAAGG+AGG - chr4_4:27869286-27869305 None:intergenic 20.0%
!! TTAAATACTTAAAGAACAGT+TGG + chr4_4:27869326-27869345 Msa0676690:intron 20.0%
!! GATTGAAGATTAAAGAAATA+GGG - chr4_4:27869462-27869481 None:intergenic 20.0%
!! AAAGTAAAAGAAATATTACC+AGG - chr4_4:27869983-27870002 None:intergenic 20.0%
!! ATAGACTAAACTAAATATAC+TGG + chr4_4:27870026-27870045 Msa0676690:intron 20.0%
!!! TGTTTATTTTATGAGTAAGA+AGG + chr4_4:27870049-27870068 Msa0676690:intron 20.0%
!! TAAAATGTAAGTTTGATGTA+TGG - chr4_4:27870468-27870487 None:intergenic 20.0%
!! AGATTTGGTTTCTGATAATT+TGG + chr4_4:27861833-27861852 Msa0676690:intron 25.0%
!!! CTTTTTTTTTTGGTTAAGCA+AGG + chr4_4:27861869-27861888 Msa0676690:intron 25.0%
!!! GACTTGCTATTAGATATTTT+GGG + chr4_4:27861911-27861930 Msa0676690:intron 25.0%
! AAACCTGGAAAATTACAAAT+GGG - chr4_4:27862156-27862175 None:intergenic 25.0%
! TAAACCTGGAAAATTACAAA+TGG - chr4_4:27862157-27862176 None:intergenic 25.0%
!! TGAAGCCAATAATTTCTTTT+TGG + chr4_4:27862605-27862624 Msa0676690:intron 25.0%
! GTTGTCCAAAAAGAAATTAT+TGG - chr4_4:27862613-27862632 None:intergenic 25.0%
!! ATAATTTCTTTTTGGACAAC+GGG + chr4_4:27862613-27862632 Msa0676690:intron 25.0%
! ATATCAACTACCTTTAAGTA+TGG - chr4_4:27862946-27862965 None:intergenic 25.0%
!!! GAATTTTTAAAAGAAGCCTA+GGG - chr4_4:27863301-27863320 None:intergenic 25.0%
!!! AGAATTTTTAAAAGAAGCCT+AGG - chr4_4:27863302-27863321 None:intergenic 25.0%
! TGTTAATGCATAATATATGC+AGG + chr4_4:27863322-27863341 Msa0676690:intron 25.0%
! GTTAATGCATAATATATGCA+GGG + chr4_4:27863323-27863342 Msa0676690:intron 25.0%
! TTAATGCATAATATATGCAG+GGG + chr4_4:27863324-27863343 Msa0676690:intron 25.0%
!!! TGTTTTAATTTACTGCATCT+TGG + chr4_4:27863455-27863474 Msa0676690:intron 25.0%
! ACCTTAGTTAATAGGTATTT+GGG - chr4_4:27863675-27863694 None:intergenic 25.0%
! AACCTTAGTTAATAGGTATT+TGG - chr4_4:27863676-27863695 None:intergenic 25.0%
!! AAAAAATTTAATTTCCCACC+AGG + chr4_4:27863747-27863766 Msa0676690:intron 25.0%
!!! GTCATAAAGTTTTATGCAAT+GGG - chr4_4:27863775-27863794 None:intergenic 25.0%
!! TTTGTTGATAGGATCAATTA+GGG - chr4_4:27864829-27864848 None:intergenic 25.0%
! TAGTTTACAATGTAGTCAAA+AGG - chr4_4:27864866-27864885 None:intergenic 25.0%
!!! ACTAAGTAAAGTTCTAGTTT+TGG - chr4_4:27864985-27865004 None:intergenic 25.0%
! AACTTTACTTAGTATAATCC+AGG + chr4_4:27864992-27865011 Msa0676690:intron 25.0%
!!! GGACAATTTTTTTGATTATC+AGG + chr4_4:27865027-27865046 Msa0676690:intron 25.0%
! CAGTTGTAAAGCTATAAAAT+TGG - chr4_4:27865345-27865364 None:intergenic 25.0%
! ACTGACAACTATATATTGTT+AGG + chr4_4:27865361-27865380 Msa0676690:intron 25.0%
!!! AATGGAGTATCTAAAACTTT+TGG + chr4_4:27865508-27865527 Msa0676690:CDS 25.0%
!!! ATGGAGTATCTAAAACTTTT+GGG + chr4_4:27865509-27865528 Msa0676690:CDS 25.0%
! GACATGGTTAAAAAAAATAG+AGG + chr4_4:27865623-27865642 Msa0676690:intron 25.0%
! ATAATTGGTGAAGATATTGT+CGG + chr4_4:27865877-27865896 Msa0676690:intron 25.0%
! TGAACATTACTAATAACTAG+TGG + chr4_4:27865947-27865966 Msa0676690:intron 25.0%
! GAACATTACTAATAACTAGT+GGG + chr4_4:27865948-27865967 Msa0676690:intron 25.0%
!! AAGGATTTGGTAAAATTACA+CGG - chr4_4:27865994-27866013 None:intergenic 25.0%
! AACTATAAAACTTTGCAGAA+AGG - chr4_4:27866013-27866032 None:intergenic 25.0%
!! TAGCTGATTTCATAACAAAA+TGG - chr4_4:27866189-27866208 None:intergenic 25.0%
! TTTGAAAATTCTCAATCACA+CGG + chr4_4:27866305-27866324 Msa0676690:CDS 25.0%
! AATGCTAAAGAACAAAGTAA+AGG - chr4_4:27866387-27866406 None:intergenic 25.0%
!! TGTTCTTTAGCATTTTCTTT+TGG + chr4_4:27866393-27866412 Msa0676690:intron 25.0%
!! CTATACCTTTTAATATCTGT+TGG + chr4_4:27866445-27866464 Msa0676690:intron 25.0%
! ACATATCTATTATCATATGG+CGG - chr4_4:27866556-27866575 None:intergenic 25.0%
! CAAATATGTTATGGAGAATT+TGG + chr4_4:27867042-27867061 Msa0676690:intron 25.0%
!! GCTTTGGACATAATTTATTA+TGG - chr4_4:27867091-27867110 None:intergenic 25.0%
! AAATTATGTCCAAAGCAAAA+AGG + chr4_4:27867095-27867114 Msa0676690:intron 25.0%
! AAATGAATATAGAAAAACGG+TGG + chr4_4:27867166-27867185 Msa0676690:intron 25.0%
! AATGAATATAGAAAAACGGT+GGG + chr4_4:27867167-27867186 Msa0676690:intron 25.0%
! AAAGAAAAGAGAAAAGAAAC+AGG + chr4_4:27867230-27867249 Msa0676690:intron 25.0%
!!! ATCAGGATTTTAGGTATAAT+CGG + chr4_4:27867568-27867587 Msa0676690:intron 25.0%
!!! ATTTTAGGTATAATCGGTAA+AGG + chr4_4:27867574-27867593 Msa0676690:intron 25.0%
!!! TTTTAGGTATAATCGGTAAA+GGG + chr4_4:27867575-27867594 Msa0676690:intron 25.0%
! AGAATCATTACATTAATCGT+AGG + chr4_4:27867616-27867635 Msa0676690:intron 25.0%
! AGCATTTCAAGAGTAATATA+AGG - chr4_4:27867703-27867722 None:intergenic 25.0%
!!! GTTTTGATTTTCAGTATAGA+GGG - chr4_4:27868111-27868130 None:intergenic 25.0%
!!! TGTTTTGATTTTCAGTATAG+AGG - chr4_4:27868112-27868131 None:intergenic 25.0%
! ATCAAAACATGCTACAAATT+AGG + chr4_4:27868123-27868142 Msa0676690:intron 25.0%
! GCTTAGAAAAAAGTGAAAAT+AGG + chr4_4:27868269-27868288 Msa0676690:intron 25.0%
!!! TTAGTTGATGTTTTCTTTAG+GGG - chr4_4:27868568-27868587 None:intergenic 25.0%
! AGAATTGTTTCAAAGAAAAG+TGG + chr4_4:27868626-27868645 Msa0676690:intron 25.0%
! GAATTGTTTCAAAGAAAAGT+GGG + chr4_4:27868627-27868646 Msa0676690:intron 25.0%
!!! GTATTCGCAAAATCTTATTT+TGG - chr4_4:27868668-27868687 None:intergenic 25.0%
! ATCACAAAATCGTTAGATTT+AGG + chr4_4:27868712-27868731 Msa0676690:intron 25.0%
! AATATGCATCAGATGAAATT+TGG - chr4_4:27868829-27868848 None:intergenic 25.0%
!! TTTCTCTTCTAAAAACTCTT+CGG + chr4_4:27868849-27868868 Msa0676690:intron 25.0%
! GGATTGAAGATTAAAGAAAT+AGG - chr4_4:27869463-27869482 None:intergenic 25.0%
!!! ATTGTTGTTTGTCTGAAATA+CGG - chr4_4:27869696-27869715 None:intergenic 25.0%
!!! TCCTTTACTTTTTTTTGAAG+AGG + chr4_4:27870103-27870122 Msa0676690:intron 25.0%
! ACCTCTTCAAAAAAAAGTAA+AGG - chr4_4:27870107-27870126 None:intergenic 25.0%
!! TGTTACTCAAAATAGTTTTC+AGG + chr4_4:27870800-27870819 Msa0676690:three_prime_UTR 25.0%
! AACACTTCTATTACAAATGT+TGG - chr4_4:27870861-27870880 None:intergenic 25.0%
! TGCTACATTATTCAATTGTT+TGG - chr4_4:27871052-27871071 None:intergenic 25.0%
TAACATATGTGATTATCTGC+AGG + chr4_4:27861665-27861684 Msa0676690:intron 30.0%
AACATATGTGATTATCTGCA+GGG + chr4_4:27861666-27861685 Msa0676690:intron 30.0%
! TTTGGTTTCTGATAATTTGG+TGG + chr4_4:27861836-27861855 Msa0676690:intron 30.0%
!!! CGACTTGCTATTAGATATTT+TGG + chr4_4:27861910-27861929 Msa0676690:intron 30.0%
!! CGATTTTATTTCTTTGTCCA+TGG + chr4_4:27862104-27862123 Msa0676690:intron 30.0%
TCTATGTGATAAAAAGTCTC+AGG + chr4_4:27862270-27862289 Msa0676690:CDS 30.0%
!! CTGAGTGCTTTTTATTGTTA+TGG + chr4_4:27862375-27862394 Msa0676690:intron 30.0%
AAGGTTATGTTTGAAGATGA+TGG + chr4_4:27862435-27862454 Msa0676690:CDS 30.0%
! ACTATGTCTTTTTCTTCACT+AGG - chr4_4:27862504-27862523 None:intergenic 30.0%
! TAATTTCTTTTTGGACAACG+GGG + chr4_4:27862614-27862633 Msa0676690:intron 30.0%
AATGCATATCTGCTGATAAA+TGG + chr4_4:27862836-27862855 Msa0676690:CDS 30.0%
ATGCATATCTGCTGATAAAT+GGG + chr4_4:27862837-27862856 Msa0676690:CDS 30.0%
GAATTTGACAGAATTGTTGT+TGG - chr4_4:27863000-27863019 None:intergenic 30.0%
! TTGTAAATCTCTTCCTTTTG+CGG + chr4_4:27863037-27863056 Msa0676690:intron 30.0%
AAATAGAAATGAACCGCAAA+AGG - chr4_4:27863053-27863072 None:intergenic 30.0%
! GTTTCTTTCCAGAATTTTAG+AGG - chr4_4:27863131-27863150 None:intergenic 30.0%
! TTCAGGTCTTTTAAACACAT+GGG - chr4_4:27863550-27863569 None:intergenic 30.0%
ATTAATTAAGCAAGTTGCCT+AGG - chr4_4:27863627-27863646 None:intergenic 30.0%
TCCCAAATACCTATTAACTA+AGG + chr4_4:27863671-27863690 Msa0676690:intron 30.0%
GATAGGTAACCTTAGTTAAT+AGG - chr4_4:27863683-27863702 None:intergenic 30.0%
! TTTTTATATTGCTCACCTTG+AGG - chr4_4:27863732-27863751 None:intergenic 30.0%
!! GGTCATAAAGTTTTATGCAA+TGG - chr4_4:27863776-27863795 None:intergenic 30.0%
GGTCAACTTAAATGATATCA+AGG - chr4_4:27863797-27863816 None:intergenic 30.0%
!! ATATCATTTAAGTTGACCCA+TGG + chr4_4:27863799-27863818 Msa0676690:intron 30.0%
!!! TCTTTGTTTTTCCTCTGTTA+TGG + chr4_4:27864259-27864278 Msa0676690:intron 30.0%
!!! CTTTGTTTTTCCTCTGTTAT+GGG + chr4_4:27864260-27864279 Msa0676690:intron 30.0%
AGAAAAAGAATCAAAGGATG+CGG - chr4_4:27864415-27864434 None:intergenic 30.0%
TTGAATACATTGGAGTTAGA+TGG - chr4_4:27864603-27864622 None:intergenic 30.0%
TCTAACTCCAATGTATTCAA+TGG + chr4_4:27864603-27864622 Msa0676690:intron 30.0%
TAATCTGCCATTGAATACAT+TGG - chr4_4:27864613-27864632 None:intergenic 30.0%
TATTCAATGGCAGATTATGA+TGG + chr4_4:27864616-27864635 Msa0676690:intron 30.0%
! GTTTGTTGATAGGATCAATT+AGG - chr4_4:27864830-27864849 None:intergenic 30.0%
CACTACTTCAATATGCAAAT+TGG - chr4_4:27864895-27864914 None:intergenic 30.0%
! GTATGCTTTATCTTCTGTTT+TGG + chr4_4:27864941-27864960 Msa0676690:intron 30.0%
!! CTTCTGTTTTGGATTTAGAT+TGG + chr4_4:27864952-27864971 Msa0676690:intron 30.0%
TCAAAAAAATTGTCCCATTG+TGG - chr4_4:27865022-27865041 None:intergenic 30.0%
! ACACTTTGTTATATATGTGC+TGG + chr4_4:27865178-27865197 Msa0676690:CDS 30.0%
AAACTGTTGAAATTTGGTCA+AGG + chr4_4:27865212-27865231 Msa0676690:CDS 30.0%
ATCTTATGTTGATCTTCTTC+AGG + chr4_4:27865261-27865280 Msa0676690:CDS 30.0%
AAAAACTATTGTTCTTGCCT+TGG + chr4_4:27865394-27865413 Msa0676690:CDS 30.0%
!! CTGAAATTTTAGCAAGTCAA+GGG + chr4_4:27865471-27865490 Msa0676690:CDS 30.0%
! AACTGAACTTGTGATTTTGA+AGG + chr4_4:27865547-27865566 Msa0676690:CDS 30.0%
!! GAAACTGGTAAACTTTTTCT+TGG + chr4_4:27865590-27865609 Msa0676690:intron 30.0%
AAAACAAAGGGAAAATGGTT+AGG - chr4_4:27865817-27865836 None:intergenic 30.0%
CCATAAAAACAAAGGGAAAA+TGG - chr4_4:27865822-27865841 None:intergenic 30.0%
!!! CCATTTTCCCTTTGTTTTTA+TGG + chr4_4:27865819-27865838 Msa0676690:intron 30.0%
CCTTACTCCATAAAAACAAA+GGG - chr4_4:27865829-27865848 None:intergenic 30.0%
!!! CCTTTGTTTTTATGGAGTAA+GGG + chr4_4:27865827-27865846 Msa0676690:intron 30.0%
AAAACTTTGCAGAAAGGATT+TGG - chr4_4:27866007-27866026 None:intergenic 30.0%
TCTCTCCAGATATATTCATT+TGG + chr4_4:27866082-27866101 Msa0676690:intron 30.0%
! ATTGGAGAAGTATATGTTCA+TGG + chr4_4:27866142-27866161 Msa0676690:intron 30.0%
TTCTTTCCCTGTTCTATTTA+TGG + chr4_4:27866253-27866272 Msa0676690:intron 30.0%
! TTGAGAATTTTCAAAAGCAG+TGG - chr4_4:27866300-27866319 None:intergenic 30.0%
! CTGGTAATGATTCACATAAT+TGG - chr4_4:27866357-27866376 None:intergenic 30.0%
CAATTATGTGAATCATTACC+AGG + chr4_4:27866355-27866374 Msa0676690:CDS 30.0%
! CTTTTAATATCTGTTGGTCA+GGG + chr4_4:27866451-27866470 Msa0676690:intron 30.0%
GGCACATATCTATTATCATA+TGG - chr4_4:27866559-27866578 None:intergenic 30.0%
TATGATAATAGATATGTGCC+TGG + chr4_4:27866559-27866578 Msa0676690:CDS 30.0%
AACAAATATATTGGGCTGTT+GGG - chr4_4:27866614-27866633 None:intergenic 30.0%
!! GGTGATGGAACAAATATATT+GGG - chr4_4:27866622-27866641 None:intergenic 30.0%
! ATGATATGATAATGTACCTG+AGG - chr4_4:27866664-27866683 None:intergenic 30.0%
CTCGGCTCTTATATAAAAAT+AGG + chr4_4:27866754-27866773 Msa0676690:intron 30.0%
ATAAATCAGTCATTGTGAAG+CGG - chr4_4:27867327-27867346 None:intergenic 30.0%
! GTAGTCAAAATCAGGATTTT+AGG + chr4_4:27867559-27867578 Msa0676690:intron 30.0%
AGAAGTCTCAAACAAAACTA+GGG + chr4_4:27867886-27867905 Msa0676690:intron 30.0%
!!! TATTTTTGGGTTTTTCCAGT+GGG - chr4_4:27867933-27867952 None:intergenic 30.0%
!!! TTATTTTTGGGTTTTTCCAG+TGG - chr4_4:27867934-27867953 None:intergenic 30.0%
!!! CGACTCTACTTGTTATTTTT+GGG - chr4_4:27867946-27867965 None:intergenic 30.0%
CCAAAAATAACAAGTAGAGT+CGG + chr4_4:27867944-27867963 Msa0676690:intron 30.0%
CAAAAATAACAAGTAGAGTC+GGG + chr4_4:27867945-27867964 Msa0676690:intron 30.0%
AAACCTTTGGTATTCTTCTT+TGG - chr4_4:27868044-27868063 None:intergenic 30.0%
! AAGAAGAATACCAAAGGTTT+TGG + chr4_4:27868044-27868063 Msa0676690:intron 30.0%
!!! TCAGTTTTGAAAATGGACTT+GGG - chr4_4:27868076-27868095 None:intergenic 30.0%
!!! ATGCAATTTTAGTTTGTTGC+AGG + chr4_4:27868191-27868210 Msa0676690:intron 30.0%
! TTGTTGCAGGTATTTTATGA+TGG + chr4_4:27868204-27868223 Msa0676690:intron 30.0%
!! ATTAGTGGGTATTCTGAAAT+CGG + chr4_4:27868437-27868456 Msa0676690:intron 30.0%
TTGAAACAATTCTGCGATTA+TGG - chr4_4:27868619-27868638 None:intergenic 30.0%
!!! TTCGCAAAATCTTATTTTGG+TGG - chr4_4:27868665-27868684 None:intergenic 30.0%
TACTTACCCTCAACAATAAT+CGG - chr4_4:27868690-27868709 None:intergenic 30.0%
AAGTTAACACAACAAGTACA+TGG - chr4_4:27869083-27869102 None:intergenic 30.0%
!!! GCTTTATTTTTGTTGTTGGA+AGG + chr4_4:27869201-27869220 Msa0676690:intron 30.0%
!! GTCATTTTATAAACTGCATC+TGG - chr4_4:27869670-27869689 None:intergenic 30.0%
!!! TTCCTTTACTGATTCTCTTT+TGG + chr4_4:27870133-27870152 Msa0676690:intron 30.0%
AACCAAAAGAGAATCAGTAA+AGG - chr4_4:27870138-27870157 None:intergenic 30.0%
TTGACTTACCTGAATTTGAA+GGG - chr4_4:27870410-27870429 None:intergenic 30.0%
! ATTGACTTACCTGAATTTGA+AGG - chr4_4:27870411-27870430 None:intergenic 30.0%
!!! TGATACTGTTTTGCTGATTT+TGG + chr4_4:27870615-27870634 Msa0676690:three_prime_UTR 30.0%
TGCTCAGTCTATGTTAGATT+TGG + chr4_4:27861818-27861837 Msa0676690:intron 35.0%
! ACAGGACGTTTATACCATTT+TGG - chr4_4:27861982-27862001 None:intergenic 35.0%
AAATGGTATAAACGTCCTGT+TGG + chr4_4:27861982-27862001 Msa0676690:CDS 35.0%
!! AAACTTGTGTCATTTCATCC+TGG + chr4_4:27862027-27862046 Msa0676690:intron 35.0%
ACTGAAAGGTTAAAAGACCA+TGG - chr4_4:27862124-27862143 None:intergenic 35.0%
ATGGGATGAATTCAACTGAA+AGG - chr4_4:27862138-27862157 None:intergenic 35.0%
! CATCCCATTTGTAATTTTCC+AGG + chr4_4:27862150-27862169 Msa0676690:intron 35.0%
! TTTGAAGCTGCGATACAAAA+TGG + chr4_4:27862226-27862245 Msa0676690:CDS 35.0%
TTGAAGCTGCGATACAAAAT+GGG + chr4_4:27862227-27862246 Msa0676690:CDS 35.0%
TTATTGTTATGGCAGATCTG+AGG + chr4_4:27862386-27862405 Msa0676690:intron 35.0%
AGTTAATGATGATCTTTCCC+AGG + chr4_4:27862521-27862540 Msa0676690:CDS 35.0%
!! TCCAAGAGCATTTATTTCCT+GGG - chr4_4:27862541-27862560 None:intergenic 35.0%
AATAAATGCTCTTGGACTTG+AGG + chr4_4:27862545-27862564 Msa0676690:CDS 35.0%
ATAAATGCTCTTGGACTTGA+GGG + chr4_4:27862546-27862565 Msa0676690:CDS 35.0%
TGCTTTAGTTATTGCTCATG+TGG + chr4_4:27862864-27862883 Msa0676690:CDS 35.0%
GCTTTAGTTATTGCTCATGT+GGG + chr4_4:27862865-27862884 Msa0676690:CDS 35.0%
CTACCTTTAAGTATGGTGAT+CGG - chr4_4:27862939-27862958 None:intergenic 35.0%
! TGCGGTTCATTTCTATTTTC+AGG + chr4_4:27863055-27863074 Msa0676690:intron 35.0%
ACCTTAAAGGTGAATAAGTG+GGG - chr4_4:27863371-27863390 None:intergenic 35.0%
CACCTTAAAGGTGAATAAGT+GGG - chr4_4:27863372-27863391 None:intergenic 35.0%
TCACCTTAAAGGTGAATAAG+TGG - chr4_4:27863373-27863392 None:intergenic 35.0%
GCTAGAGAAATTCACCTTAA+AGG - chr4_4:27863384-27863403 None:intergenic 35.0%
! TTTTCCAATCCAGATTCTAG+CGG - chr4_4:27863498-27863517 None:intergenic 35.0%
! GTTCAGGTCTTTTAAACACA+TGG - chr4_4:27863551-27863570 None:intergenic 35.0%
TTAATCAATTGGGAGAGTTC+AGG - chr4_4:27863567-27863586 None:intergenic 35.0%
TGACAGAATAAAAACCAGCT+GGG - chr4_4:27864184-27864203 None:intergenic 35.0%
ATGACAGAATAAAAACCAGC+TGG - chr4_4:27864185-27864204 None:intergenic 35.0%
AAAGAAGATAACGAGAGCAA+TGG - chr4_4:27864244-27864263 None:intergenic 35.0%
CAAGGTACAGTCAAAAACAA+GGG - chr4_4:27864474-27864493 None:intergenic 35.0%
TCAAGGTACAGTCAAAAACA+AGG - chr4_4:27864475-27864494 None:intergenic 35.0%
! TACATTTACCACCTTTGAGA+AGG - chr4_4:27864537-27864556 None:intergenic 35.0%
AGGTGGTAAATGTACTAATC+TGG + chr4_4:27864543-27864562 Msa0676690:intron 35.0%
AGCCTAAAATCCACCATATA+TGG + chr4_4:27864641-27864660 Msa0676690:intron 35.0%
!!! CACCATATATGGTGGATTTT+AGG - chr4_4:27864646-27864665 None:intergenic 35.0%
CTAAAATCCACCATATATGG+TGG + chr4_4:27864644-27864663 Msa0676690:intron 35.0%
! ATTTGAGACCGCAATACAAT+AGG - chr4_4:27864748-27864767 None:intergenic 35.0%
GATAGGATCAATTAGGGAAT+TGG - chr4_4:27864823-27864842 None:intergenic 35.0%
ACACTTGCTTCAAAACTCAT+GGG + chr4_4:27865133-27865152 Msa0676690:CDS 35.0%
!! GCTGAAATTTTAGCAAGTCA+AGG + chr4_4:27865470-27865489 Msa0676690:CDS 35.0%
! TTTTAGATACTCCATTGCTG+TGG - chr4_4:27865504-27865523 None:intergenic 35.0%
TTTCTGTAGACAGTGCAATT+CGG - chr4_4:27865574-27865593 None:intergenic 35.0%
TCTTGGATTTCTATACGACA+TGG + chr4_4:27865607-27865626 Msa0676690:intron 35.0%
!!! CCCTTTGTTTTTATGGAGTA+AGG + chr4_4:27865826-27865845 Msa0676690:intron 35.0%
CCCTTACTCCATAAAAACAA+AGG - chr4_4:27865830-27865849 None:intergenic 35.0%
!! TGTTTTTATGGAGTAAGGGA+AGG + chr4_4:27865831-27865850 Msa0676690:intron 35.0%
!!! GTGAAGATATTGTCGGTTTT+AGG + chr4_4:27865884-27865903 Msa0676690:intron 35.0%
TTACTAATAACTAGTGGGAG+TGG + chr4_4:27865953-27865972 Msa0676690:intron 35.0%
CTCCAGATATATTCATTTGG+TGG + chr4_4:27866085-27866104 Msa0676690:intron 35.0%
CTCCACCAAATGAATATATC+TGG - chr4_4:27866090-27866109 None:intergenic 35.0%
! CAGATATATTCATTTGGTGG+AGG + chr4_4:27866088-27866107 Msa0676690:intron 35.0%
TGATATGAAGGACTCTCAAT+TGG + chr4_4:27866124-27866143 Msa0676690:intron 35.0%
AGTGAAGAAATTATGGGTGT+GGG - chr4_4:27866227-27866246 None:intergenic 35.0%
AAGTGAAGAAATTATGGGTG+TGG - chr4_4:27866228-27866247 None:intergenic 35.0%
CTGCAACCATAAATAGAACA+GGG - chr4_4:27866262-27866281 None:intergenic 35.0%
TCTGCAACCATAAATAGAAC+AGG - chr4_4:27866263-27866282 None:intergenic 35.0%
GGAATTATCAGCACCATAAT+AGG - chr4_4:27866336-27866355 None:intergenic 35.0%
ACAAAGTAAAGGTAACTACC+TGG - chr4_4:27866376-27866395 None:intergenic 35.0%
TTGGTGTAAATCATAGTGTC+TGG + chr4_4:27866412-27866431 Msa0676690:intron 35.0%
CCTGACCAACAGATATTAAA+AGG - chr4_4:27866453-27866472 None:intergenic 35.0%
! CCTTTTAATATCTGTTGGTC+AGG + chr4_4:27866450-27866469 Msa0676690:intron 35.0%
AATAGATATGTGCCTGGATA+TGG + chr4_4:27866565-27866584 Msa0676690:CDS 35.0%
ACAAATATATTGGGCTGTTG+GGG - chr4_4:27866613-27866632 None:intergenic 35.0%
GAACAAATATATTGGGCTGT+TGG - chr4_4:27866615-27866634 None:intergenic 35.0%
!! CGGTGATGGAACAAATATAT+TGG - chr4_4:27866623-27866642 None:intergenic 35.0%
! ATATGATAATGTACCTGAGG+AGG - chr4_4:27866661-27866680 None:intergenic 35.0%
ATATGTGCATGATATTCACC+AGG + chr4_4:27866709-27866728 Msa0676690:intron 35.0%
TATGTGCATGATATTCACCA+GGG + chr4_4:27866710-27866729 Msa0676690:intron 35.0%
! ACTGTTTTCCATCAAACCAA+AGG - chr4_4:27867529-27867548 None:intergenic 35.0%
CAGAAGTCTCAAACAAAACT+AGG + chr4_4:27867885-27867904 Msa0676690:intron 35.0%
GAAGTCTCAAACAAAACTAG+GGG + chr4_4:27867887-27867906 Msa0676690:intron 35.0%
AACAAAACTAGGGGTTTACA+TGG + chr4_4:27867896-27867915 Msa0676690:intron 35.0%
ACAAAACTAGGGGTTTACAT+GGG + chr4_4:27867897-27867916 Msa0676690:intron 35.0%
!!! CCGACTCTACTTGTTATTTT+TGG - chr4_4:27867947-27867966 None:intergenic 35.0%
TGAGAAACCCATCAAAAAAC+AGG + chr4_4:27867995-27868014 Msa0676690:intron 35.0%
TTTGGTATTCTTCTTTGGTC+TGG - chr4_4:27868039-27868058 None:intergenic 35.0%
AGACCAAAGAAGAATACCAA+AGG + chr4_4:27868038-27868057 Msa0676690:intron 35.0%
TGGGTTATAACCAAAACCTT+TGG - chr4_4:27868057-27868076 None:intergenic 35.0%
!!! GTCAGTTTTGAAAATGGACT+TGG - chr4_4:27868077-27868096 None:intergenic 35.0%
!!! CACTGTGTCAGTTTTGAAAA+TGG - chr4_4:27868083-27868102 None:intergenic 35.0%
! TTGATTTTCAGTATAGAGGG+TGG - chr4_4:27868108-27868127 None:intergenic 35.0%
TCAGAATACCCACTAATTTC+CGG - chr4_4:27868434-27868453 None:intergenic 35.0%
!! TTATTTTACCTCACCCAAAC+TGG + chr4_4:27868480-27868499 Msa0676690:intron 35.0%
! CATATAGGGTTTTCCAGTTT+GGG - chr4_4:27868496-27868515 None:intergenic 35.0%
TGGAAAACCCTATATGGTTT+GGG + chr4_4:27868500-27868519 Msa0676690:intron 35.0%
!! CAAAGAAAAGTGGGTTATAC+AGG + chr4_4:27868636-27868655 Msa0676690:intron 35.0%
! CGAATACCGATTATTGTTGA+GGG + chr4_4:27868681-27868700 Msa0676690:intron 35.0%
ACTCTTCGGCTAAATTAGTT+CGG + chr4_4:27868863-27868882 Msa0676690:intron 35.0%
TTAGAGTGTGAAAGTTGTCT+CGG + chr4_4:27868924-27868943 Msa0676690:intron 35.0%
TAACTTCGACTCTGAATGTT+TGG + chr4_4:27869097-27869116 Msa0676690:intron 35.0%
!!! CTGAATGTTTGGTTTTGAAG+TGG + chr4_4:27869108-27869127 Msa0676690:intron 35.0%
CAGTGGCGTTCATATTATTT+GGG + chr4_4:27869164-27869183 Msa0676690:intron 35.0%
TGAGTGACTTAAAGAACAGT+TGG + chr4_4:27869351-27869370 Msa0676690:intron 35.0%
TGAGTGACTTAAAGAACAGT+TGG + chr4_4:27869351-27869370 Msa0676690:intron 35.0%
!! AACAGTTGGTTTGAGTGATT+TGG + chr4_4:27869390-27869409 Msa0676690:intron 35.0%
AGTTTGACTGGAAGAAAGAA+AGG - chr4_4:27869484-27869503 None:intergenic 35.0%
AAGTATTTGGGAAGTTTGAC+TGG - chr4_4:27869496-27869515 None:intergenic 35.0%
TCAAACTTCCCAAATACTTC+CGG + chr4_4:27869497-27869516 Msa0676690:CDS 35.0%
TCTGGATTTCTAATCAAAGC+AGG - chr4_4:27869560-27869579 None:intergenic 35.0%
TACAATTGAGAACCCAATGT+TGG - chr4_4:27869596-27869615 None:intergenic 35.0%
! AATCCAATTGGATTTGAGGT+AGG - chr4_4:27869812-27869831 None:intergenic 35.0%
CATGAATCCAATTGGATTTG+AGG - chr4_4:27869816-27869835 None:intergenic 35.0%
! AAGGCTTTTCAATGAGACAT+CGG + chr4_4:27870213-27870232 Msa0676690:CDS 35.0%
!!! GAGCTTATCAGAAGCATTTT+TGG - chr4_4:27870344-27870363 None:intergenic 35.0%
! CTGTTTTACTTATGTGTTGC+AGG + chr4_4:27870489-27870508 Msa0676690:intron 35.0%
TTCATCTGACTACTACTGAA+TGG + chr4_4:27870512-27870531 Msa0676690:CDS 35.0%
TCATCTGACTACTACTGAAT+GGG + chr4_4:27870513-27870532 Msa0676690:CDS 35.0%
AATCACTCTCTCCAGATTGA+CGG - chr4_4:27861695-27861714 None:intergenic 40.0%
! CAATCTGGAGAGAGTGATTT+TGG + chr4_4:27861696-27861715 Msa0676690:CDS 40.0%
CCATGTTATGCACATAAACC+TGG - chr4_4:27862171-27862190 None:intergenic 40.0%
CCAGGTTTATGTGCATAACA+TGG + chr4_4:27862168-27862187 Msa0676690:intron 40.0%
TGAAGCTGCGATACAAAATG+GGG + chr4_4:27862228-27862247 Msa0676690:CDS 40.0%
ATGGGGAAAGAACTTTGCTA+AGG + chr4_4:27862245-27862264 Msa0676690:CDS 40.0%
TGGGGAAAGAACTTTGCTAA+GGG + chr4_4:27862246-27862265 Msa0676690:CDS 40.0%
ACAATCAAACGCAAACAGCA+TGG - chr4_4:27862333-27862352 None:intergenic 40.0%
ACAAAACTTCTCACACACCT+TGG + chr4_4:27862468-27862487 Msa0676690:CDS 40.0%
CACTAGGTACATTGAAACCA+AGG - chr4_4:27862488-27862507 None:intergenic 40.0%
TCCCAGGAAATAAATGCTCT+TGG + chr4_4:27862537-27862556 Msa0676690:CDS 40.0%
!! GTCCAAGAGCATTTATTTCC+TGG - chr4_4:27862542-27862561 None:intergenic 40.0%
TGCTAATAACACAGGACATG+TGG + chr4_4:27862575-27862594 Msa0676690:intron 40.0%
GTTGTTGCGGATAATGCAAA+CGG + chr4_4:27862703-27862722 Msa0676690:CDS 40.0%
GGTTCAGACAAAATCGAAGA+TGG + chr4_4:27862724-27862743 Msa0676690:CDS 40.0%
AGACAAAATCGAAGATGGTG+TGG + chr4_4:27862729-27862748 Msa0676690:CDS 40.0%
TGCACACTGTCATCAAATGA+AGG - chr4_4:27862775-27862794 None:intergenic 40.0%
! ATGGTGATCGGTTCTTCTTA+AGG - chr4_4:27862927-27862946 None:intergenic 40.0%
GAACCGATCACCATACTTAA+AGG + chr4_4:27862933-27862952 Msa0676690:CDS 40.0%
!!! TTTTCAGGTTGTATCAGCGA+TGG + chr4_4:27863070-27863089 Msa0676690:intron 40.0%
!! TTTCCAGAATTTTAGAGGCC+TGG - chr4_4:27863126-27863145 None:intergenic 40.0%
TACACTGCAAAGAAGAGCAA+GGG - chr4_4:27863153-27863172 None:intergenic 40.0%
TTACACTGCAAAGAAGAGCA+AGG - chr4_4:27863154-27863173 None:intergenic 40.0%
CTTTGCAGTGTAAGTCTCAT+TGG + chr4_4:27863161-27863180 Msa0676690:intron 40.0%
ACCCCACTTATTCACCTTTA+AGG + chr4_4:27863367-27863386 Msa0676690:intron 40.0%
TTCTTGGTAAAGTAGCTGAG+CGG - chr4_4:27863406-27863425 None:intergenic 40.0%
ATTTATTCCCCGCTAGAATC+TGG + chr4_4:27863486-27863505 Msa0676690:intron 40.0%
TTTCCAATCCAGATTCTAGC+GGG - chr4_4:27863497-27863516 None:intergenic 40.0%
AAGCAAGTTGCCTAGGAATA+GGG - chr4_4:27863620-27863639 None:intergenic 40.0%
TAAGCAAGTTGCCTAGGAAT+AGG - chr4_4:27863621-27863640 None:intergenic 40.0%
!! ATGTTCAGAGGGGTATTGAT+AGG - chr4_4:27863700-27863719 None:intergenic 40.0%
GACAATGTGAATGTTCAGAG+GGG - chr4_4:27863710-27863729 None:intergenic 40.0%
GGACAATGTGAATGTTCAGA+GGG - chr4_4:27863711-27863730 None:intergenic 40.0%
AGGACAATGTGAATGTTCAG+AGG - chr4_4:27863712-27863731 None:intergenic 40.0%
GAACATTCACATTGTCCTCA+AGG + chr4_4:27863714-27863733 Msa0676690:intron 40.0%
!! AGTTTTATGCAATGGGATCC+TGG - chr4_4:27863768-27863787 None:intergenic 40.0%
GGCCTAATTACCCTTTCATT+GGG - chr4_4:27863836-27863855 None:intergenic 40.0%
TGGCCTAATTACCCTTTCAT+TGG - chr4_4:27863837-27863856 None:intergenic 40.0%
ATGAAAGGGTAATTAGGCCA+AGG + chr4_4:27863837-27863856 Msa0676690:intron 40.0%
ACAGAAGTTGTTGCAAGAAG+CGG - chr4_4:27863950-27863969 None:intergenic 40.0%
TTGCAACAACTTCTGTACTG+AGG + chr4_4:27863954-27863973 Msa0676690:intron 40.0%
AAGAATGATCAACAGGTGGT+AGG - chr4_4:27864084-27864103 None:intergenic 40.0%
AGCAACAATGTGTGTTGTGT+GGG - chr4_4:27864140-27864159 None:intergenic 40.0%
AAGCAACAATGTGTGTTGTG+TGG - chr4_4:27864141-27864160 None:intergenic 40.0%
!! TTGTTGCTTCTGCTATTTCC+CGG + chr4_4:27864152-27864171 Msa0676690:intron 40.0%
AGAGCAATGGAAAGAAGACT+GGG - chr4_4:27864231-27864250 None:intergenic 40.0%
GATTGATCAACCCATAACAG+AGG - chr4_4:27864273-27864292 None:intergenic 40.0%
AGGGTCAACAATCAGAAAAC+AGG - chr4_4:27864341-27864360 None:intergenic 40.0%
ATGTGCAAACTCTCAACGAA+GGG - chr4_4:27864360-27864379 None:intergenic 40.0%
TGTTTCTCTCAACATACCAC+TGG + chr4_4:27864568-27864587 Msa0676690:intron 40.0%
ACATTGAAATTGGGCCATGA+TGG - chr4_4:27864685-27864704 None:intergenic 40.0%
ATCATGGCCCAATTTCAATG+TGG + chr4_4:27864684-27864703 Msa0676690:intron 40.0%
! TGCAATGATTTTCGCGTGAT+GGG - chr4_4:27864720-27864739 None:intergenic 40.0%
GCACCATTCCTATTGTATTG+CGG + chr4_4:27864737-27864756 Msa0676690:intron 40.0%
AGACCGCAATACAATAGGAA+TGG - chr4_4:27864743-27864762 None:intergenic 40.0%
GTGATGAAAATCAATCGTGG+CGG - chr4_4:27864797-27864816 None:intergenic 40.0%
TCGGTGATGAAAATCAATCG+TGG - chr4_4:27864800-27864819 None:intergenic 40.0%
GGATCAATTAGGGAATTGGT+CGG - chr4_4:27864819-27864838 None:intergenic 40.0%
ATAATCCAGGAACTCCACAA+TGG + chr4_4:27865005-27865024 Msa0676690:intron 40.0%
TAATCCAGGAACTCCACAAT+GGG + chr4_4:27865006-27865025 Msa0676690:intron 40.0%
! AGTTTGCTCAGAGAGATGAA+TGG + chr4_4:27865095-27865114 Msa0676690:intron 40.0%
CACACTTGCTTCAAAACTCA+TGG + chr4_4:27865132-27865151 Msa0676690:CDS 40.0%
CACTTGCTTCAAAACTCATG+GGG + chr4_4:27865134-27865153 Msa0676690:CDS 40.0%
ACTTGCTTCAAAACTCATGG+GGG + chr4_4:27865135-27865154 Msa0676690:CDS 40.0%
ATTGCACTGTCTACAGAAAC+TGG + chr4_4:27865575-27865594 Msa0676690:CDS 40.0%
AGTATTCGTCAACCAGAAGT+GGG - chr4_4:27865698-27865717 None:intergenic 40.0%
AAGTATTCGTCAACCAGAAG+TGG - chr4_4:27865699-27865718 None:intergenic 40.0%
GAACATTTGTGCATACTGCA+TGG + chr4_4:27865754-27865773 Msa0676690:intron 40.0%
TAACTAGTGGGAGTGGTTAA+TGG + chr4_4:27865960-27865979 Msa0676690:intron 40.0%
TGTAAATGGCATCTGCCATA+CGG + chr4_4:27866050-27866069 Msa0676690:intron 40.0%
GTGAAGAAATTATGGGTGTG+GGG - chr4_4:27866226-27866245 None:intergenic 40.0%
GAAAATTCTCAATCACACGG+TGG + chr4_4:27866308-27866327 Msa0676690:CDS 40.0%
GAGAATTTGGGAGAAGATTG+AGG + chr4_4:27867055-27867074 Msa0676690:intron 40.0%
! TATGAGACGCCTTTTTGCTT+TGG - chr4_4:27867107-27867126 None:intergenic 40.0%
! AATTTTGGGCCCCCAAATTT+TGG + chr4_4:27867404-27867423 Msa0676690:intron 40.0%
! GATTGAGTTGTGTCATCCTT+TGG + chr4_4:27867510-27867529 Msa0676690:intron 40.0%
!! TGTGTCATCCTTTGGTTTGA+TGG + chr4_4:27867518-27867537 Msa0676690:intron 40.0%
TGGTTTGATGGAAAACAGTG+CGG + chr4_4:27867530-27867549 Msa0676690:intron 40.0%
GGTTCAAGGTAGTCAAAATC+AGG + chr4_4:27867551-27867570 Msa0676690:intron 40.0%
AACAAGTAGAGTCGGGTAAT+TGG + chr4_4:27867952-27867971 Msa0676690:intron 40.0%
ACAAGTAGAGTCGGGTAATT+GGG + chr4_4:27867953-27867972 Msa0676690:intron 40.0%
ACCCATCAAAAAACAGGTTC+CGG + chr4_4:27868001-27868020 Msa0676690:intron 40.0%
ATTCTTCTTTGGTCTGGATC+TGG - chr4_4:27868033-27868052 None:intergenic 40.0%
CAGAATACCCACTAATTTCC+GGG - chr4_4:27868433-27868452 None:intergenic 40.0%
TAACCACCCATTACACCATT+GGG - chr4_4:27868463-27868482 None:intergenic 40.0%
ATAACCACCCATTACACCAT+TGG - chr4_4:27868464-27868483 None:intergenic 40.0%
! CCATATAGGGTTTTCCAGTT+TGG - chr4_4:27868497-27868516 None:intergenic 40.0%
CCAAACTGGAAAACCCTATA+TGG + chr4_4:27868494-27868513 Msa0676690:intron 40.0%
CTGGAAAACCCTATATGGTT+TGG + chr4_4:27868499-27868518 Msa0676690:intron 40.0%
!! ACCCTATATGGTTTGGGTTT+TGG + chr4_4:27868506-27868525 Msa0676690:intron 40.0%
CCCAAAACCCAAACCATATA+GGG - chr4_4:27868510-27868529 None:intergenic 40.0%
!! CCCTATATGGTTTGGGTTTT+GGG + chr4_4:27868507-27868526 Msa0676690:intron 40.0%
ACCCAAAACCCAAACCATAT+AGG - chr4_4:27868511-27868530 None:intergenic 40.0%
!! TTTTCTTTAGGGGTGTACGT+AGG - chr4_4:27868558-27868577 None:intergenic 40.0%
! GCGAATACCGATTATTGTTG+AGG + chr4_4:27868680-27868699 Msa0676690:intron 40.0%
!! CTTGATGATGAACAGCATCA+TGG - chr4_4:27868760-27868779 None:intergenic 40.0%
AGTTGTCTCGGAAAATGCAT+TGG + chr4_4:27868936-27868955 Msa0676690:intron 40.0%
CAACAAATTGACCAGAAGAG+TGG - chr4_4:27869043-27869062 None:intergenic 40.0%
TTAAGTCCAAACTCAACCAG+TGG + chr4_4:27869147-27869166 Msa0676690:intron 40.0%
CCAAATAATATGAACGCCAC+TGG - chr4_4:27869166-27869185 None:intergenic 40.0%
CCAGTGGCGTTCATATTATT+TGG + chr4_4:27869163-27869182 Msa0676690:intron 40.0%
!! TTTGTTGTTGGAAGGCACAA+TGG + chr4_4:27869209-27869228 Msa0676690:intron 40.0%
! TTGTTGTTGGAAGGCACAAT+GGG + chr4_4:27869210-27869229 Msa0676690:intron 40.0%
CAAACTTCCCAAATACTTCC+GGG + chr4_4:27869498-27869517 Msa0676690:CDS 40.0%
AAACTTCCCAAATACTTCCG+GGG + chr4_4:27869499-27869518 Msa0676690:CDS 40.0%
TGAGGTTCAAATACTCTCAC+AGG - chr4_4:27869533-27869552 None:intergenic 40.0%
CTAATCAAAGCAGGAGTTTG+AGG - chr4_4:27869551-27869570 None:intergenic 40.0%
CAATATCAGCAGCCAACATT+GGG + chr4_4:27869581-27869600 Msa0676690:CDS 40.0%
TTTGAACACCAGCAGAACTA+GGG - chr4_4:27869844-27869863 None:intergenic 40.0%
!! GCTGATACTTCAAAAGTACC+TGG + chr4_4:27869962-27869981 Msa0676690:CDS 40.0%
CTTGTCAATGATGTGACGAT+AGG - chr4_4:27870196-27870215 None:intergenic 40.0%
CTATCGTCACATCATTGACA+AGG + chr4_4:27870194-27870213 Msa0676690:CDS 40.0%
GAAGACAACTCAAAGAGACT+TGG + chr4_4:27870283-27870302 Msa0676690:CDS 40.0%
! ACAACTCAAAGAGACTTGGT+GGG + chr4_4:27870287-27870306 Msa0676690:CDS 40.0%
TTGTTTGCGAAGTTGAACAG+TGG + chr4_4:27870310-27870329 Msa0676690:CDS 40.0%
TGTTTGCGAAGTTGAACAGT+GGG + chr4_4:27870311-27870330 Msa0676690:CDS 40.0%
! GCGTTAGACAATGGTGATTT+TGG + chr4_4:27870379-27870398 Msa0676690:CDS 40.0%
! ATCTAGAGGCAGTAGTCTTT+TGG - chr4_4:27870698-27870717 None:intergenic 40.0%
TGGTCAGTAAAGAGATCTGC+AGG - chr4_4:27861636-27861655 None:intergenic 45.0%
!!! TACCATTTTGGAGCTCTCAG+CGG - chr4_4:27861970-27861989 None:intergenic 45.0%
! GAATCTGAAGCAGAAGAACC+AGG - chr4_4:27862048-27862067 None:intergenic 45.0%
CATAACATGGTCACCGAAGA+CGG + chr4_4:27862181-27862200 Msa0676690:CDS 45.0%
! TGCGTTTGATTGTTAGCCTG+TGG + chr4_4:27862340-27862359 Msa0676690:intron 45.0%
TTGTTATGGCAGATCTGAGG+AGG + chr4_4:27862389-27862408 Msa0676690:intron 45.0%
TGAGGAGGAAAGGGAAACAT+GGG + chr4_4:27862404-27862423 Msa0676690:CDS 45.0%
! GGAAACATGGGGCTTTTTGA+AGG + chr4_4:27862416-27862435 Msa0676690:CDS 45.0%
GGCACATCTGCTAATAACAC+AGG + chr4_4:27862567-27862586 Msa0676690:CDS 45.0%
! TTTCTTTTTGGACAACGGGG+AGG + chr4_4:27862617-27862636 Msa0676690:intron 45.0%
!! AGATGGAGGAGTATCAGCTT+TGG - chr4_4:27862665-27862684 None:intergenic 45.0%
!! TGCTGGCAACTTTGTTGTTG+CGG + chr4_4:27862690-27862709 Msa0676690:CDS 45.0%
AATCGAAGATGGTGTGGAAG+TGG + chr4_4:27862735-27862754 Msa0676690:CDS 45.0%
CTTGTAGTCCCCAACAACTA+AGG - chr4_4:27862803-27862822 None:intergenic 45.0%
CTTAGTTGTTGGGGACTACA+AGG + chr4_4:27862801-27862820 Msa0676690:CDS 45.0%
!! ACACCAGGCCTCTAAAATTC+TGG + chr4_4:27863120-27863139 Msa0676690:CDS 45.0%
!! GTCTCATTGGTCTTTGCTAC+TGG + chr4_4:27863174-27863193 Msa0676690:intron 45.0%
!!! GCTCTCTTTTGTTTTGCCCT+AGG + chr4_4:27863282-27863301 Msa0676690:intron 45.0%
CATAATATATGCAGGGGCCA+GGG + chr4_4:27863330-27863349 Msa0676690:intron 45.0%
TTCCAATCCAGATTCTAGCG+GGG - chr4_4:27863496-27863515 None:intergenic 45.0%
AGCAAGTTGCCTAGGAATAG+GGG - chr4_4:27863619-27863638 None:intergenic 45.0%
TTATGCAATGGGATCCTGGT+GGG - chr4_4:27863764-27863783 None:intergenic 45.0%
TTTATGCAATGGGATCCTGG+TGG - chr4_4:27863765-27863784 None:intergenic 45.0%
AGTTGACCCATGGTTTCTGA+AGG + chr4_4:27863809-27863828 Msa0676690:intron 45.0%
GTTGACCCATGGTTTCTGAA+GGG + chr4_4:27863810-27863829 Msa0676690:intron 45.0%
! TTTCTGAAGGGCCCAATGAA+AGG + chr4_4:27863822-27863841 Msa0676690:intron 45.0%
! TTCTGAAGGGCCCAATGAAA+GGG + chr4_4:27863823-27863842 Msa0676690:intron 45.0%
GGCCCAATGAAAGGGTAATT+AGG + chr4_4:27863831-27863850 Msa0676690:intron 45.0%
GTAATTAGGCCAAGGTGTGA+AGG + chr4_4:27863845-27863864 Msa0676690:intron 45.0%
AAGACGTCTGTGGACCTAAT+GGG - chr4_4:27863872-27863891 None:intergenic 45.0%
ATTACAGCAGAAGACGTCTG+TGG - chr4_4:27863882-27863901 None:intergenic 45.0%
AGGACACAAGACGGGAAATA+TGG - chr4_4:27863907-27863926 None:intergenic 45.0%
AGAACAAGGAGGACACAAGA+CGG - chr4_4:27863916-27863935 None:intergenic 45.0%
ACCACAGATTGCTAATCGCT+GGG + chr4_4:27863984-27864003 Msa0676690:intron 45.0%
GGGTTCTTTCTGCAGAAAGT+TGG + chr4_4:27864004-27864023 Msa0676690:intron 45.0%
AAAGTTGGAGTCCAACAGCT+TGG + chr4_4:27864019-27864038 Msa0676690:intron 45.0%
AAGTTGGAGTCCAACAGCTT+GGG + chr4_4:27864020-27864039 Msa0676690:intron 45.0%
GGTAGGATATGCTAACGCAT+TGG - chr4_4:27864067-27864086 None:intergenic 45.0%
AGGGAAGAATGATCAACAGG+TGG - chr4_4:27864088-27864107 None:intergenic 45.0%
AGCAGGGAAGAATGATCAAC+AGG - chr4_4:27864091-27864110 None:intergenic 45.0%
ACAATGTGTGTTGTGTGGGT+GGG - chr4_4:27864136-27864155 None:intergenic 45.0%
AACAATGTGTGTTGTGTGGG+TGG - chr4_4:27864137-27864156 None:intergenic 45.0%
!! TGTTGCTTCTGCTATTTCCC+GGG + chr4_4:27864153-27864172 Msa0676690:intron 45.0%
GAGAGCAATGGAAAGAAGAC+TGG - chr4_4:27864232-27864251 None:intergenic 45.0%
GAAGGAAGAGAACAGCCTAA+GGG - chr4_4:27864311-27864330 None:intergenic 45.0%
TGAAGGAAGAGAACAGCCTA+AGG - chr4_4:27864312-27864331 None:intergenic 45.0%
TAGGCTGTTCTCTTCCTTCA+CGG + chr4_4:27864312-27864331 Msa0676690:intron 45.0%
CATGTGCAAACTCTCAACGA+AGG - chr4_4:27864361-27864380 None:intergenic 45.0%
AAAGAAGAGGCGAAGAAAGG+GGG - chr4_4:27864390-27864409 None:intergenic 45.0%
CAAAGAAGAGGCGAAGAAAG+GGG - chr4_4:27864391-27864410 None:intergenic 45.0%
CCAAAGAAGAGGCGAAGAAA+GGG - chr4_4:27864392-27864411 None:intergenic 45.0%
GAGCTTGGGGTTTATCTTCA+AGG - chr4_4:27864492-27864511 None:intergenic 45.0%
TGAAGATAAACCCCAAGCTC+AGG + chr4_4:27864492-27864511 Msa0676690:intron 45.0%
TAGATGGAGAAGTTTGCCAG+TGG - chr4_4:27864587-27864606 None:intergenic 45.0%
ATGGCGGCCACATTGAAATT+GGG - chr4_4:27864694-27864713 None:intergenic 45.0%
AATGGCGGCCACATTGAAAT+TGG - chr4_4:27864695-27864714 None:intergenic 45.0%
! GCAATGATTTTCGCGTGATG+GGG - chr4_4:27864719-27864738 None:intergenic 45.0%
! GTGCAATGATTTTCGCGTGA+TGG - chr4_4:27864721-27864740 None:intergenic 45.0%
AATTTGGTCAAGGAGCCTGT+CGG + chr4_4:27865222-27865241 Msa0676690:CDS 45.0%
ATTGTTCTTGCCTTGGCAAC+TGG + chr4_4:27865401-27865420 Msa0676690:CDS 45.0%
TTGTTCTTGCCTTGGCAACT+GGG + chr4_4:27865402-27865421 Msa0676690:CDS 45.0%
ACTCTTCAAATGCCCACTTC+TGG + chr4_4:27865683-27865702 Msa0676690:intron 45.0%
TCACACGGTGGATCCTATTA+TGG + chr4_4:27866320-27866339 Msa0676690:CDS 45.0%
AATATATTGGGCTGTTGGGG+TGG - chr4_4:27866610-27866629 None:intergenic 45.0%
ATAATGTACCTGAGGAGGCT+GGG - chr4_4:27866656-27866675 None:intergenic 45.0%
AGGAGTCCTTGAGTCTAAAC+AGG + chr4_4:27867250-27867269 Msa0676690:intron 45.0%
GAGACTCCTGTTTAGACTCA+AGG - chr4_4:27867259-27867278 None:intergenic 45.0%
TAAACAGGAGTCTCGAACTC+AGG + chr4_4:27867265-27867284 Msa0676690:intron 45.0%
! GCACAGCCTTGTGAATATCA+GGG - chr4_4:27867472-27867491 None:intergenic 45.0%
! AGCACAGCCTTGTGAATATC+AGG - chr4_4:27867473-27867492 None:intergenic 45.0%
ATGGAAAACAGTGCGGTTCA+AGG + chr4_4:27867537-27867556 Msa0676690:intron 45.0%
AACTAGGGGTTTACATGGGT+TGG + chr4_4:27867901-27867920 Msa0676690:intron 45.0%
ACTAGGGGTTTACATGGGTT+GGG + chr4_4:27867902-27867921 Msa0676690:intron 45.0%
!!! CCCGGAACCTGTTTTTTGAT+GGG - chr4_4:27868005-27868024 None:intergenic 45.0%
CCCATCAAAAAACAGGTTCC+GGG + chr4_4:27868002-27868021 Msa0676690:intron 45.0%
!!! ACCCGGAACCTGTTTTTTGA+TGG - chr4_4:27868006-27868025 None:intergenic 45.0%
!! ATTGGGTTGGGTTGAGTAGT+GGG - chr4_4:27868406-27868425 None:intergenic 45.0%
! ACTAATTTCCGGGCTGGATT+GGG - chr4_4:27868423-27868442 None:intergenic 45.0%
AATCCAGCCCGGAAATTAGT+GGG + chr4_4:27868423-27868442 Msa0676690:intron 45.0%
!! GTATTCTGAAATCGGCCCAA+TGG + chr4_4:27868445-27868464 Msa0676690:intron 45.0%
AAATCGGCCCAATGGTGTAA+TGG + chr4_4:27868453-27868472 Msa0676690:intron 45.0%
AATCGGCCCAATGGTGTAAT+GGG + chr4_4:27868454-27868473 Msa0676690:intron 45.0%
TTGACCAGAAGAGTGGTCAA+GGG - chr4_4:27869036-27869055 None:intergenic 45.0%
ATTGACCAGAAGAGTGGTCA+AGG - chr4_4:27869037-27869056 None:intergenic 45.0%
ATGGGAGAAAGCTCATGCAT+TGG + chr4_4:27869228-27869247 Msa0676690:intron 45.0%
GGTTCAAATACTCTCACAGG+AGG - chr4_4:27869530-27869549 None:intergenic 45.0%
GCAATATCAGCAGCCAACAT+TGG + chr4_4:27869580-27869599 Msa0676690:CDS 45.0%
! TGGTAAGGTTGATTGGTAGG+CGG - chr4_4:27869728-27869747 None:intergenic 45.0%
! TGTAGGCTGGTAAGGTTGAT+TGG - chr4_4:27869735-27869754 None:intergenic 45.0%
GCACCTACCTCAAATCCAAT+TGG + chr4_4:27869806-27869825 Msa0676690:CDS 45.0%
GGGGTTTGCATGAATCCAAT+TGG - chr4_4:27869824-27869843 None:intergenic 45.0%
TTGAACACCAGCAGAACTAG+GGG - chr4_4:27869843-27869862 None:intergenic 45.0%
CTTTGAACACCAGCAGAACT+AGG - chr4_4:27869845-27869864 None:intergenic 45.0%
!! AATGAGACATCGGAAGCACT+GGG + chr4_4:27870223-27870242 Msa0676690:CDS 45.0%
GACAACTCAAAGAGACTTGG+TGG + chr4_4:27870286-27870305 Msa0676690:CDS 45.0%
GTTTGCGAAGTTGAACAGTG+GGG + chr4_4:27870312-27870331 Msa0676690:CDS 45.0%
! TAAGCTCCTTCAGCTTTGTC+AGG + chr4_4:27870357-27870376 Msa0676690:CDS 45.0%
CTTTGTCAGGCGTTAGACAA+TGG + chr4_4:27870370-27870389 Msa0676690:CDS 45.0%
TGGTACTGCCCTTCAAATTC+AGG + chr4_4:27870399-27870418 Msa0676690:CDS 45.0%
GACTACTGCCTCTAGATTGA+AGG + chr4_4:27870701-27870720 Msa0676690:three_prime_UTR 45.0%
!! AGATTGAAGGTGCAGGGTTT+TGG + chr4_4:27870714-27870733 Msa0676690:three_prime_UTR 45.0%
TAACCGACACTAGAACAGCT+TGG - chr4_4:27870959-27870978 None:intergenic 45.0%
!!! ATTTTGTTTTTATTTTATTA+GGG - chr4_4:27866781-27866800 None:intergenic 5.0%
!!! AATTTTGTTTTTATTTTATT+AGG - chr4_4:27866782-27866801 None:intergenic 5.0%
!!! AATTTTAAAGAAAAAATATA+AGG + chr4_4:27868329-27868348 Msa0676690:intron 5.0%
!!! TAAAAAAAACAAAATAATTT+TGG + chr4_4:27868377-27868396 Msa0676690:intron 5.0%
!! GGAGAGAGTGATTTTGGTGC+AGG + chr4_4:27861702-27861721 Msa0676690:CDS 50.0%
TACCGCTGAGAGCTCCAAAA+TGG + chr4_4:27861965-27861984 Msa0676690:CDS 50.0%
AAGCCAAAAGACGCACCAAC+AGG - chr4_4:27862000-27862019 None:intergenic 50.0%
!!! GTTGGTGCGTCTTTTGGCTT+TGG + chr4_4:27862000-27862019 Msa0676690:CDS 50.0%
TCTGCTTCAGATTCACCTGC+TGG + chr4_4:27862054-27862073 Msa0676690:intron 50.0%
CTGCTTCAGATTCACCTGCT+GGG + chr4_4:27862055-27862074 Msa0676690:intron 50.0%
TGCTTCAGATTCACCTGCTG+GGG + chr4_4:27862056-27862075 Msa0676690:intron 50.0%
TGGAACAATGTTGCGCTTCG+TGG - chr4_4:27862313-27862332 None:intergenic 50.0%
ATGGCAGATCTGAGGAGGAA+AGG + chr4_4:27862394-27862413 Msa0676690:intron 50.0%
TGGCAGATCTGAGGAGGAAA+GGG + chr4_4:27862395-27862414 Msa0676690:intron 50.0%
CTGAGGAGGAAAGGGAAACA+TGG + chr4_4:27862403-27862422 Msa0676690:CDS 50.0%
GAGGAGGAAAGGGAAACATG+GGG + chr4_4:27862405-27862424 Msa0676690:CDS 50.0%
!! GAGGAGTATCAGCTTTGGAC+TGG - chr4_4:27862660-27862679 None:intergenic 50.0%
AGCTGATACTCCTCCATCTG+CGG + chr4_4:27862666-27862685 Msa0676690:CDS 50.0%
TGCAGCGTGCCTTAGTTGTT+GGG + chr4_4:27862791-27862810 Msa0676690:intron 50.0%
! CCTCCTTGTGGGAAAGTACA+CGG + chr4_4:27862893-27862912 Msa0676690:CDS 50.0%
! CTCCTTGTGGGAAAGTACAC+GGG + chr4_4:27862894-27862913 Msa0676690:CDS 50.0%
ATCCCGTGTACTTTCCCACA+AGG - chr4_4:27862899-27862918 None:intergenic 50.0%
! TCTTGAGCCTTGTGAACACC+AGG + chr4_4:27863105-27863124 Msa0676690:CDS 50.0%
TTAGAGGCCTGGTGTTCACA+AGG - chr4_4:27863115-27863134 None:intergenic 50.0%
GCATAATATATGCAGGGGCC+AGG + chr4_4:27863329-27863348 Msa0676690:intron 50.0%
TTCCCCGCTAGAATCTGGAT+TGG + chr4_4:27863491-27863510 Msa0676690:intron 50.0%
CCTAGGAATAGGGGTTGAGA+TGG - chr4_4:27863610-27863629 None:intergenic 50.0%
CCATCTCAACCCCTATTCCT+AGG + chr4_4:27863607-27863626 Msa0676690:intron 50.0%
TTGGGCCCTTCAGAAACCAT+GGG - chr4_4:27863818-27863837 None:intergenic 50.0%
ATTGGGCCCTTCAGAAACCA+TGG - chr4_4:27863819-27863838 None:intergenic 50.0%
AGACGTCTGTGGACCTAATG+GGG - chr4_4:27863871-27863890 None:intergenic 50.0%
GAAGACGTCTGTGGACCTAA+TGG - chr4_4:27863873-27863892 None:intergenic 50.0%
GAACAAGGAGGACACAAGAC+GGG - chr4_4:27863915-27863934 None:intergenic 50.0%
CACCACAGATTGCTAATCGC+TGG + chr4_4:27863983-27864002 Msa0676690:intron 50.0%
ACCCAGCGATTAGCAATCTG+TGG - chr4_4:27863988-27864007 None:intergenic 50.0%
! GGATATGCTAACGCATTGGC+TGG - chr4_4:27864063-27864082 None:intergenic 50.0%
GGGATGTTGAGAAAGTGGAG+GGG - chr4_4:27864114-27864133 None:intergenic 50.0%
GGGGATGTTGAGAAAGTGGA+GGG - chr4_4:27864115-27864134 None:intergenic 50.0%
AATGTGTGTTGTGTGGGTGG+GGG - chr4_4:27864134-27864153 None:intergenic 50.0%
CAATGTGTGTTGTGTGGGTG+GGG - chr4_4:27864135-27864154 None:intergenic 50.0%
AAAACCAGCTGGGAACTTCC+CGG - chr4_4:27864174-27864193 None:intergenic 50.0%
CAGAAAACAGGAAGCCGTGA+AGG - chr4_4:27864329-27864348 None:intergenic 50.0%
CCCTTTCTTCGCCTCTTCTT+TGG + chr4_4:27864389-27864408 Msa0676690:intron 50.0%
GCCAAAGAAGAGGCGAAGAA+AGG - chr4_4:27864393-27864412 None:intergenic 50.0%
AAAGGATGCGGCCAAAGAAG+AGG - chr4_4:27864403-27864422 None:intergenic 50.0%
!! TCTGTTTCTACCTGTCCCAC+TGG + chr4_4:27864438-27864457 Msa0676690:intron 50.0%
AAGGGCCAACAAGAACCAGT+GGG - chr4_4:27864456-27864475 None:intergenic 50.0%
ATGCAACAGCACCTGAGCTT+GGG - chr4_4:27864506-27864525 None:intergenic 50.0%
CATGAGCAGAGCCTTCTCAA+AGG + chr4_4:27864523-27864542 Msa0676690:intron 50.0%
!! AGAGCGCTGTCCACCATATA+TGG - chr4_4:27864657-27864676 None:intergenic 50.0%
CAGCGCTCTTAGATCCATCA+TGG + chr4_4:27864668-27864687 Msa0676690:intron 50.0%
!! ATTTTCGCGTGATGGGGCAA+TGG - chr4_4:27864713-27864732 None:intergenic 50.0%
TCTGCTACTGCCATCTACCT+TGG + chr4_4:27864769-27864788 Msa0676690:intron 50.0%
TTGTCCCATTGTGGAGTTCC+TGG - chr4_4:27865013-27865032 None:intergenic 50.0%
AGCAAGTGTGTCGCAAAGCA+TGG - chr4_4:27865122-27865141 None:intergenic 50.0%
CTCAACAAGCTTGCACAGAG+AGG - chr4_4:27865444-27865463 None:intergenic 50.0%
GAGAGAACTACAGCTCCGTA+TGG - chr4_4:27866068-27866087 None:intergenic 50.0%
TCATGTGCCACCTGGTGTTT+CGG + chr4_4:27866504-27866523 Msa0676690:CDS 50.0%
TATTGACCTCCCGAAACACC+AGG - chr4_4:27866517-27866536 None:intergenic 50.0%
TATGGCGGCTGATAGCTATC+AGG - chr4_4:27866541-27866560 None:intergenic 50.0%
TAATGTACCTGAGGAGGCTG+GGG - chr4_4:27866655-27866674 None:intergenic 50.0%
GATAATGTACCTGAGGAGGC+TGG - chr4_4:27866657-27866676 None:intergenic 50.0%
AGCCTCCAATTACTCAGGGA+CGG - chr4_4:27866736-27866755 None:intergenic 50.0%
TCCCTGAGTAATTGGAGGCT+CGG + chr4_4:27866736-27866755 Msa0676690:intron 50.0%
! TTTGGGCCCCCAAATTTTGG+AGG + chr4_4:27867407-27867426 Msa0676690:intron 50.0%
AGCTGGGCCTCCAAAATTTG+GGG - chr4_4:27867417-27867436 None:intergenic 50.0%
GAGCTGGGCCTCCAAAATTT+GGG - chr4_4:27867418-27867437 None:intergenic 50.0%
TGAGCTGGGCCTCCAAAATT+TGG - chr4_4:27867419-27867438 None:intergenic 50.0%
GCAAACAGCTCTACTGAGCT+GGG - chr4_4:27867433-27867452 None:intergenic 50.0%
TGCAAACAGCTCTACTGAGC+TGG - chr4_4:27867434-27867453 None:intergenic 50.0%
! AGCCTTGTGAATATCAGGGC+CGG - chr4_4:27867468-27867487 None:intergenic 50.0%
ATTCACAAGGCTGTGCTCAG+TGG + chr4_4:27867476-27867495 Msa0676690:intron 50.0%
GTCGGGTAATTGGGTGTGTA+TGG + chr4_4:27867962-27867981 Msa0676690:intron 50.0%
!! GATTGGGTTGGGTTGAGTAG+TGG - chr4_4:27868407-27868426 None:intergenic 50.0%
! CACTAATTTCCGGGCTGGAT+TGG - chr4_4:27868424-27868443 None:intergenic 50.0%
CAATCCAGCCCGGAAATTAG+TGG + chr4_4:27868422-27868441 Msa0676690:intron 50.0%
ATACCCACTAATTTCCGGGC+TGG - chr4_4:27868429-27868448 None:intergenic 50.0%
! AGGGTTTTCCAGTTTGGGTG+AGG - chr4_4:27868491-27868510 None:intergenic 50.0%
GTACGTAGGTCAGTTTGGGT+TGG - chr4_4:27868544-27868563 None:intergenic 50.0%
GGGTGTACGTAGGTCAGTTT+GGG - chr4_4:27868548-27868567 None:intergenic 50.0%
TTCTGCGATTATGGTCGCAG+TGG - chr4_4:27868610-27868629 None:intergenic 50.0%
! ACGTATAGCTATGCCGACTG+CGG + chr4_4:27868977-27868996 Msa0676690:intron 50.0%
TGACCAGAAGAGTGGTCAAG+GGG - chr4_4:27869035-27869054 None:intergenic 50.0%
! TGAACGCCACTGGTTGAGTT+TGG - chr4_4:27869156-27869175 None:intergenic 50.0%
!! GTTGTGCCCCGGAAGTATTT+GGG - chr4_4:27869508-27869527 None:intergenic 50.0%
GTTGGCTGCTGATATTGCTC+TGG - chr4_4:27869578-27869597 None:intergenic 50.0%
TGATTGGTAGGCGGGAAAGT+TGG - chr4_4:27869719-27869738 None:intergenic 50.0%
! GGTAAGGTTGATTGGTAGGC+GGG - chr4_4:27869727-27869746 None:intergenic 50.0%
! GGCTGGTAAGGTTGATTGGT+AGG - chr4_4:27869731-27869750 None:intergenic 50.0%
TGACCAATGTGAGATGGAGC+AGG - chr4_4:27869761-27869780 None:intergenic 50.0%
GCTCCATCTCACATTGGTCA+TGG + chr4_4:27869761-27869780 Msa0676690:CDS 50.0%
!! ATGCAAACCCCTAGTTCTGC+TGG + chr4_4:27869833-27869852 Msa0676690:CDS 50.0%
TCTGCTGGTGTTCAAAGACC+TGG + chr4_4:27869848-27869867 Msa0676690:CDS 50.0%
CTGCTGGTGTTCAAAGACCT+GGG + chr4_4:27869849-27869868 Msa0676690:CDS 50.0%
TGCTGGTGTTCAAAGACCTG+GGG + chr4_4:27869850-27869869 Msa0676690:CDS 50.0%
GTATCAGCAGTCTGCACAGT+AGG - chr4_4:27869950-27869969 None:intergenic 50.0%
! CAATGAGACATCGGAAGCAC+TGG + chr4_4:27870222-27870241 Msa0676690:CDS 50.0%
GTGCAAACCCAGCAAAGAAG+CGG + chr4_4:27870254-27870273 Msa0676690:CDS 50.0%
TGCAAACCCAGCAAAGAAGC+GGG + chr4_4:27870255-27870274 Msa0676690:CDS 50.0%
CTATCTCCCGCTTCTTTGCT+GGG - chr4_4:27870264-27870283 None:intergenic 50.0%
TCTATCTCCCGCTTCTTTGC+TGG - chr4_4:27870265-27870284 None:intergenic 50.0%
CTAACGCCTGACAAAGCTGA+AGG - chr4_4:27870366-27870385 None:intergenic 50.0%
AATGGGATGAATGCCAGTCC+TGG + chr4_4:27870530-27870549 Msa0676690:CDS 50.0%
GATGAATGCCAGTCCTGGTT+AGG + chr4_4:27870535-27870554 Msa0676690:CDS 50.0%
TCAGTGAACCTAACCAGGAC+TGG - chr4_4:27870546-27870565 None:intergenic 50.0%
TCGCTTCAGTGAACCTAACC+AGG - chr4_4:27870551-27870570 None:intergenic 50.0%
! TGCCTCTAGATTGAAGGTGC+AGG + chr4_4:27870707-27870726 Msa0676690:three_prime_UTR 50.0%
! GCCTCTAGATTGAAGGTGCA+GGG + chr4_4:27870708-27870727 Msa0676690:three_prime_UTR 50.0%
ACCCTGCACCTTCAATCTAG+AGG - chr4_4:27870712-27870731 None:intergenic 50.0%
! TTTTCATCACCACACCCCTC+TGG + chr4_4:27870917-27870936 Msa0676690:three_prime_UTR 50.0%
CATCACCATTGGTACCAGAG+GGG - chr4_4:27870934-27870953 None:intergenic 50.0%
GCATCACCATTGGTACCAGA+GGG - chr4_4:27870935-27870954 None:intergenic 50.0%
AGCATCACCATTGGTACCAG+AGG - chr4_4:27870936-27870955 None:intergenic 50.0%
! ACAGCTTGGAGCATCACCAT+TGG - chr4_4:27870945-27870964 None:intergenic 50.0%
GCTCCAAGCTGTTCTAGTGT+CGG + chr4_4:27870953-27870972 Msa0676690:three_prime_UTR 50.0%
CTCAGCGGTACTGCACAGAA+AGG - chr4_4:27861955-27861974 None:intergenic 55.0%
! CGTCCTGTTGGTGCGTCTTT+TGG + chr4_4:27861994-27862013 Msa0676690:CDS 55.0%
!!! GGTGCGTCTTTTGGCTTTGG+AGG + chr4_4:27862003-27862022 Msa0676690:CDS 55.0%
ACGACTCACCAGACCGTCTT+CGG - chr4_4:27862197-27862216 None:intergenic 55.0%
TCAGCAGATGCAAGAGCCAC+AGG - chr4_4:27862359-27862378 None:intergenic 55.0%
GTGCAGCGTGCCTTAGTTGT+TGG + chr4_4:27862790-27862809 Msa0676690:intron 55.0%
GCAGCGTGCCTTAGTTGTTG+GGG + chr4_4:27862792-27862811 Msa0676690:intron 55.0%
ATGTGGGTAGCACCTCCTTG+TGG + chr4_4:27862881-27862900 Msa0676690:CDS 55.0%
TGTGGGTAGCACCTCCTTGT+GGG + chr4_4:27862882-27862901 Msa0676690:CDS 55.0%
CCGTGTACTTTCCCACAAGG+AGG - chr4_4:27862896-27862915 None:intergenic 55.0%
TATATGCAGGGGCCAGGGTT+TGG + chr4_4:27863335-27863354 Msa0676690:intron 55.0%
! AGGTGAATAAGTGGGGTGCC+CGG - chr4_4:27863364-27863383 None:intergenic 55.0%
CTAATGGGGCCTTCACACCT+TGG - chr4_4:27863857-27863876 None:intergenic 55.0%
CAAGGTGTGAAGGCCCCATT+AGG + chr4_4:27863855-27863874 Msa0676690:intron 55.0%
GTCCTCCTTGTTCTTGCTCC+TGG + chr4_4:27863922-27863941 Msa0676690:intron 55.0%
CACCAGGAGCAAGAACAAGG+AGG - chr4_4:27863927-27863946 None:intergenic 55.0%
TTGTTGCAAGAAGCGGCACC+AGG - chr4_4:27863943-27863962 None:intergenic 55.0%
TTGGAGTCCAACAGCTTGGG+TGG + chr4_4:27864023-27864042 Msa0676690:intron 55.0%
ATCACTGCCACCCAAGCTGT+TGG - chr4_4:27864033-27864052 None:intergenic 55.0%
AACAGCTTGGGTGGCAGTGA+TGG + chr4_4:27864032-27864051 Msa0676690:intron 55.0%
TGAGAAAGTGGAGGGGAGCA+GGG - chr4_4:27864107-27864126 None:intergenic 55.0%
TTGAGAAAGTGGAGGGGAGC+AGG - chr4_4:27864108-27864127 None:intergenic 55.0%
GGGGGATGTTGAGAAAGTGG+AGG - chr4_4:27864116-27864135 None:intergenic 55.0%
GGTGGGGGATGTTGAGAAAG+TGG - chr4_4:27864119-27864138 None:intergenic 55.0%
AAACCAGCTGGGAACTTCCC+GGG - chr4_4:27864173-27864192 None:intergenic 55.0%
TTGTCCTGACGTCCTCCCTT+AGG + chr4_4:27864293-27864312 Msa0676690:intron 55.0%
GGAAGAGAACAGCCTAAGGG+AGG - chr4_4:27864308-27864327 None:intergenic 55.0%
CCAACAAGAACCAGTGGGAC+AGG - chr4_4:27864451-27864470 None:intergenic 55.0%
!! CCTGTCCCACTGGTTCTTGT+TGG + chr4_4:27864448-27864467 Msa0676690:intron 55.0%
CAAGGGCCAACAAGAACCAG+TGG - chr4_4:27864457-27864476 None:intergenic 55.0%
TGCAACAGCACCTGAGCTTG+GGG - chr4_4:27864505-27864524 None:intergenic 55.0%
CATGCAACAGCACCTGAGCT+TGG - chr4_4:27864507-27864526 None:intergenic 55.0%
GAGCAGAGCCTTCTCAAAGG+TGG + chr4_4:27864526-27864545 Msa0676690:intron 55.0%
GCGCTGTCCACCATATATGG+TGG - chr4_4:27864654-27864673 None:intergenic 55.0%
AATCAATCGTGGCGGCACCA+AGG - chr4_4:27864789-27864808 None:intergenic 55.0%
GCTTCAAAACTCATGGGGGC+TGG + chr4_4:27865139-27865158 Msa0676690:CDS 55.0%
AGCCTGTCGGATGAGCACAA+GGG + chr4_4:27865235-27865254 Msa0676690:CDS 55.0%
AGGGTTGCTGACCACAGCAA+TGG + chr4_4:27865490-27865509 Msa0676690:CDS 55.0%
CATGTGCCACCTGGTGTTTC+GGG + chr4_4:27866505-27866524 Msa0676690:CDS 55.0%
!! GGAACAGGAGCACCATATCC+AGG - chr4_4:27866580-27866599 None:intergenic 55.0%
GCCGAGCCTCCAATTACTCA+GGG - chr4_4:27866740-27866759 None:intergenic 55.0%
AGCCGAGCCTCCAATTACTC+AGG - chr4_4:27866741-27866760 None:intergenic 55.0%
GTCATTGTGAAGCGGCCTAG+CGG - chr4_4:27867319-27867338 None:intergenic 55.0%
GCTGGGCCTCCAAAATTTGG+GGG - chr4_4:27867416-27867435 None:intergenic 55.0%
!! ATGGGTTGGGTCAAACCCAC+TGG + chr4_4:27867915-27867934 Msa0676690:intron 55.0%
GGTCTGGATCTGGTTGTACC+CGG - chr4_4:27868023-27868042 None:intergenic 55.0%
! TTTCCGGGCTGGATTGGGTT+GGG - chr4_4:27868418-27868437 None:intergenic 55.0%
! ATTTCCGGGCTGGATTGGGT+TGG - chr4_4:27868419-27868438 None:intergenic 55.0%
GGGGTGTACGTAGGTCAGTT+TGG - chr4_4:27868549-27868568 None:intergenic 55.0%
TGCGATTATGGTCGCAGTGG+TGG - chr4_4:27868607-27868626 None:intergenic 55.0%
! CTATGCCGACTGCGGACAAA+GGG + chr4_4:27868985-27869004 Msa0676690:intron 55.0%
! TATGCCGACTGCGGACAAAG+GGG + chr4_4:27868986-27869005 Msa0676690:intron 55.0%
AAGTCCCCTTTGTCCGCAGT+CGG - chr4_4:27868993-27869012 None:intergenic 55.0%
TTCCCCCTTGACCACTCTTC+TGG + chr4_4:27869029-27869048 Msa0676690:intron 55.0%
GACCAGAAGAGTGGTCAAGG+GGG - chr4_4:27869034-27869053 None:intergenic 55.0%
!! GGTTGTGCCCCGGAAGTATT+TGG - chr4_4:27869509-27869528 None:intergenic 55.0%
! TGAGATGGAGCAGGAGGTGT+AGG - chr4_4:27869752-27869771 None:intergenic 55.0%
CCAATGTGAGATGGAGCAGG+AGG - chr4_4:27869758-27869777 None:intergenic 55.0%
CCTCCTGCTCCATCTCACAT+TGG + chr4_4:27869755-27869774 Msa0676690:CDS 55.0%
GGGCCATGACCAATGTGAGA+TGG - chr4_4:27869767-27869786 None:intergenic 55.0%
CCGCAACGTGTGGTAAGTTC+GGG - chr4_4:27869787-27869806 None:intergenic 55.0%
CCCGAACTTACCACACGTTG+CGG + chr4_4:27869784-27869803 Msa0676690:CDS 55.0%
GCCGCAACGTGTGGTAAGTT+CGG - chr4_4:27869788-27869807 None:intergenic 55.0%
TGGTGTTCAAAGACCTGGGG+TGG + chr4_4:27869853-27869872 Msa0676690:CDS 55.0%
GGTGTTCAAAGACCTGGGGT+GGG + chr4_4:27869854-27869873 Msa0676690:CDS 55.0%
GGTTGAATTGATCCCACCCC+AGG - chr4_4:27869869-27869888 None:intergenic 55.0%
TTGCACAGGTTGCGGTTGAG+GGG - chr4_4:27869900-27869919 None:intergenic 55.0%
GTTGCACAGGTTGCGGTTGA+GGG - chr4_4:27869901-27869920 None:intergenic 55.0%
TCAACCGCAACCTGTGCAAC+CGG + chr4_4:27869901-27869920 Msa0676690:CDS 55.0%
TCAGCAGTCTGCACAGTAGG+TGG - chr4_4:27869947-27869966 None:intergenic 55.0%
CTGCAGGGTTGCCGTCAATC+TGG + chr4_4:27861681-27861700 Msa0676690:intron 60.0%
TTCACCTGCTGGGGCTTCAG+AGG + chr4_4:27862065-27862084 Msa0676690:intron 60.0%
CATGGTCACCGAAGACGGTC+TGG + chr4_4:27862186-27862205 Msa0676690:CDS 60.0%
AAGTTGCCAGCAGCCGCAGA+TGG - chr4_4:27862682-27862701 None:intergenic 60.0%
! GTGAATAAGTGGGGTGCCCG+GGG - chr4_4:27863362-27863381 None:intergenic 60.0%
! GGTGAATAAGTGGGGTGCCC+GGG - chr4_4:27863363-27863382 None:intergenic 60.0%
CGGCACCAGGAGCAAGAACA+AGG - chr4_4:27863930-27863949 None:intergenic 60.0%
TTTCCCGGGAAGTTCCCAGC+TGG + chr4_4:27864167-27864186 Msa0676690:intron 60.0%
ACAGCCTAAGGGAGGACGTC+AGG - chr4_4:27864300-27864319 None:intergenic 60.0%
! TTCGCGTGATGGGGCAATGG+CGG - chr4_4:27864710-27864729 None:intergenic 60.0%
GAGCCTGTCGGATGAGCACA+AGG + chr4_4:27865234-27865253 Msa0676690:CDS 60.0%
GCCTGTCGGATGAGCACAAG+GGG + chr4_4:27865236-27865255 Msa0676690:CDS 60.0%
TCCCCTTGTGCTCATCCGAC+AGG - chr4_4:27865240-27865259 None:intergenic 60.0%
CCTTGGCAACTGGGCAGAAG+CGG + chr4_4:27865411-27865430 Msa0676690:CDS 60.0%
GTATCCACTCATGTGCCGCC+TGG + chr4_4:27866478-27866497 Msa0676690:CDS 60.0%
AACACCAGGCGGCACATGAG+TGG - chr4_4:27866485-27866504 None:intergenic 60.0%
GGTGGCACATGAACACCAGG+CGG - chr4_4:27866496-27866515 None:intergenic 60.0%
CCAGGTGGCACATGAACACC+AGG - chr4_4:27866499-27866518 None:intergenic 60.0%
CCTGGTGTTCATGTGCCACC+TGG + chr4_4:27866496-27866515 Msa0676690:CDS 60.0%
TGACCTCCCGAAACACCAGG+TGG - chr4_4:27866514-27866533 None:intergenic 60.0%
TATTGGGCTGTTGGGGTGGC+TGG - chr4_4:27866606-27866625 None:intergenic 60.0%
TGGGGCTGAGTAGTCGGTGA+TGG - chr4_4:27866637-27866656 None:intergenic 60.0%
CAATTACTCAGGGACGGCCC+TGG - chr4_4:27866730-27866749 None:intergenic 60.0%
CAGGGCCGTCCCTGAGTAAT+TGG + chr4_4:27866728-27866747 Msa0676690:intron 60.0%
GGCCGTCCCTGAGTAATTGG+AGG + chr4_4:27866731-27866750 Msa0676690:intron 60.0%
CAACTCTCGCTGCTACCGCT+AGG + chr4_4:27867301-27867320 Msa0676690:intron 60.0%
AGAGCTGTTTGCACCCCCTC+AGG + chr4_4:27867441-27867460 Msa0676690:intron 60.0%
GAGCTGTTTGCACCCCCTCA+GGG + chr4_4:27867442-27867461 Msa0676690:intron 60.0%
AATATCAGGGCCGGCCCTGA+GGG - chr4_4:27867459-27867478 None:intergenic 60.0%
GGCCGGCCCTGATATTCACA+AGG + chr4_4:27867463-27867482 Msa0676690:intron 60.0%
CAACCCAACCCAATCCAGCC+CGG + chr4_4:27868412-27868431 Msa0676690:intron 60.0%
! CGGCCCAATGGTGTAATGGG+TGG + chr4_4:27868457-27868476 Msa0676690:intron 60.0%
! GCTATGCCGACTGCGGACAA+AGG + chr4_4:27868984-27869003 Msa0676690:intron 60.0%
TCTCACAGGAGGTTGTGCCC+CGG - chr4_4:27869519-27869538 None:intergenic 60.0%
! GCAGGAGGTGTAGGCTGGTA+AGG - chr4_4:27869743-27869762 None:intergenic 60.0%
! ATGGAGCAGGAGGTGTAGGC+TGG - chr4_4:27869748-27869767 None:intergenic 60.0%
TGCACAGGTTGCGGTTGAGG+GGG - chr4_4:27869899-27869918 None:intergenic 60.0%
GGTTGCACAGGTTGCGGTTG+AGG - chr4_4:27869902-27869921 None:intergenic 60.0%
!! ACAGTAGGTGGTGGAGCTGC+TGG - chr4_4:27869935-27869954 None:intergenic 60.0%
GCAGTCTGCACAGTAGGTGG+TGG - chr4_4:27869944-27869963 None:intergenic 60.0%
!! GAGACATCGGAAGCACTGGG+AGG + chr4_4:27870226-27870245 Msa0676690:CDS 60.0%
CCATTGGTACCAGAGGGGTG+TGG - chr4_4:27870929-27870948 None:intergenic 60.0%
CCACACCCCTCTGGTACCAA+TGG + chr4_4:27870926-27870945 Msa0676690:three_prime_UTR 60.0%
!! CTTGCCTCTGAAGCCCCAGC+AGG - chr4_4:27862072-27862091 None:intergenic 65.0%
ACTCCTCCATCTGCGGCTGC+TGG + chr4_4:27862673-27862692 Msa0676690:CDS 65.0%
TTGCCAGCAGCCGCAGATGG+AGG - chr4_4:27862679-27862698 None:intergenic 65.0%
CGTGGCGGCACCAAGGTAGA+TGG - chr4_4:27864782-27864801 None:intergenic 65.0%
CCGCTTCTGCCCAGTTGCCA+AGG - chr4_4:27865414-27865433 None:intergenic 65.0%
GTGCCACCTGGTGTTTCGGG+AGG + chr4_4:27866508-27866527 Msa0676690:CDS 65.0%
TGGGGTGGCTGGTGTGGAAC+AGG - chr4_4:27866595-27866614 None:intergenic 65.0%
GGAGGCTGGGGCTGAGTAGT+CGG - chr4_4:27866643-27866662 None:intergenic 65.0%
TACTCAGCCCCAGCCTCCTC+AGG + chr4_4:27866645-27866664 Msa0676690:CDS 65.0%
TGTTTGCACCCCCTCAGGGC+CGG + chr4_4:27867446-27867465 Msa0676690:intron 65.0%
ATATCAGGGCCGGCCCTGAG+GGG - chr4_4:27867458-27867477 None:intergenic 65.0%
GAATATCAGGGCCGGCCCTG+AGG - chr4_4:27867460-27867479 None:intergenic 65.0%
! GAGGTAGGTGCCGCAACGTG+TGG - chr4_4:27869797-27869816 None:intergenic 65.0%
GGTTGCGGTTGAGGGGGACT+GGG - chr4_4:27869893-27869912 None:intergenic 65.0%
AGGTTGCGGTTGAGGGGGAC+TGG - chr4_4:27869894-27869913 None:intergenic 65.0%
GCAGCCGGTTGCACAGGTTG+CGG - chr4_4:27869908-27869927 None:intergenic 65.0%
AGGGGCCAGGGTTTGGACCC+CGG + chr4_4:27863342-27863361 Msa0676690:intron 70.0%
GGCTGTTGGGGTGGCTGGTG+TGG - chr4_4:27866601-27866620 None:intergenic 70.0%
TATCAGGGCCGGCCCTGAGG+GGG - chr4_4:27867457-27867476 None:intergenic 70.0%
TGCGGTTGAGGGGGACTGGG+AGG - chr4_4:27869890-27869909 None:intergenic 70.0%
GGTGCAGCAGCCGGTTGCAC+AGG - chr4_4:27869914-27869933 None:intergenic 70.0%
GGAGCTGCTGGTGCAGCAGC+CGG - chr4_4:27869923-27869942 None:intergenic 70.0%
GGGGCCAGGGTTTGGACCCC+GGG + chr4_4:27863343-27863362 Msa0676690:intron 75.0%
GGTGCCCGGGGTCCAAACCC+TGG - chr4_4:27863350-27863369 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 27861592 27871084 27861592 ID=Msa0676690;Name=Msa0676690
chr4_4 mRNA 27861592 27871084 27861592 ID=Msa0676690-mRNA-1;Parent=Msa0676690;Name=Msa0676690-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.66|0.56|0.93|0.8|0.68|16|478|746
chr4_4 exon 27861592 27861597 27861592 ID=Msa0676690-mRNA-1:exon:7296;Parent=Msa0676690-mRNA-1
chr4_4 exon 27861687 27861723 27861687 ID=Msa0676690-mRNA-1:exon:7297;Parent=Msa0676690-mRNA-1
chr4_4 exon 27861965 27862032 27861965 ID=Msa0676690-mRNA-1:exon:7298;Parent=Msa0676690-mRNA-1
chr4_4 exon 27862172 27862299 27862172 ID=Msa0676690-mRNA-1:exon:7299;Parent=Msa0676690-mRNA-1
chr4_4 exon 27862401 27862593 27862401 ID=Msa0676690-mRNA-1:exon:7300;Parent=Msa0676690-mRNA-1
chr4_4 exon 27862661 27862789 27862661 ID=Msa0676690-mRNA-1:exon:7301;Parent=Msa0676690-mRNA-1
chr4_4 exon 27862796 27862954 27862796 ID=Msa0676690-mRNA-1:exon:7302;Parent=Msa0676690-mRNA-1
chr4_4 exon 27863077 27863169 27863077 ID=Msa0676690-mRNA-1:exon:7303;Parent=Msa0676690-mRNA-1
chr4_4 exon 27865097 27865282 27865097 ID=Msa0676690-mRNA-1:exon:7304;Parent=Msa0676690-mRNA-1
chr4_4 exon 27865383 27865596 27865383 ID=Msa0676690-mRNA-1:exon:7305;Parent=Msa0676690-mRNA-1
chr4_4 exon 27866282 27866376 27866282 ID=Msa0676690-mRNA-1:exon:7306;Parent=Msa0676690-mRNA-1
chr4_4 exon 27866472 27866666 27866472 ID=Msa0676690-mRNA-1:exon:7307;Parent=Msa0676690-mRNA-1
chr4_4 exon 27869497 27869619 27869497 ID=Msa0676690-mRNA-1:exon:7308;Parent=Msa0676690-mRNA-1
chr4_4 exon 27869704 27869983 27869704 ID=Msa0676690-mRNA-1:exon:7309;Parent=Msa0676690-mRNA-1
chr4_4 exon 27870182 27870420 27870182 ID=Msa0676690-mRNA-1:exon:7310;Parent=Msa0676690-mRNA-1
chr4_4 exon 27870511 27871084 27870511 ID=Msa0676690-mRNA-1:exon:7311;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27861592 27861597 27861592 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27861687 27861723 27861687 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27861965 27862032 27861965 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27862172 27862299 27862172 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27862401 27862593 27862401 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27862661 27862789 27862661 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27862796 27862954 27862796 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27863077 27863169 27863077 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27865097 27865282 27865097 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27865383 27865596 27865383 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27866282 27866376 27866282 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27866472 27866666 27866472 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27869497 27869619 27869497 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27869704 27869983 27869704 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27870182 27870420 27870182 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 CDS 27870511 27870606 27870511 ID=Msa0676690-mRNA-1:cds;Parent=Msa0676690-mRNA-1
chr4_4 three_prime_UTR 27870607 27871084 27870607 ID=Msa0676690-mRNA-1:three_prime_utr;Parent=Msa0676690-mRNA-1
Gene Sequence

>Msa0676690

ATGCCTGGTTGCCGTCAATCTGGAGAGAGTGATTTTGGTGCAGTACCGCTGAGAGCTCCAAAATGGTATAAACGTCCTGTTGGTGCGTCTTTTGGCTTTGGAGGTAAACTTGTTTATGTGCATAACATGGTCACCGAAGACGGTCTGGTGAGTCGTTCATCTGAATTTGAAGCTGCGATACAAAATGGGGAAAGAACTTTGCTAAGGGTTCTATGTGATAAAAAGTCTCAGGAATCAGTATCTGAGGAGGAAAGGGAAACATGGGGCTTTTTGAAGGTTATGTTTGAAGATGATGGAACTGCAAGAACAAAACTTCTCACACACCTTGGTTTCAATGTACCTAGTGAAGAAAAAGACATAGTTAATGATGATCTTTCCCAGGAAATAAATGCTCTTGGACTTGAGGGCACATCTGCTAATAACACAGGACATTCCAAAGCTGATACTCCTCCATCTGCGGCTGCTGGCAACTTTGTTGTTGCGGATAATGCAAACGGTTCAGACAAAATCGAAGATGGTGTGGAAGTGGAAGAGAGCAGTGATCCTTCATTTGATGACAGTCGTGCCTTAGTTGTTGGGGACTACAAGGATGCAGTTTCTCAATGCATATCTGCTGATAAATGGGCTGATGCTTTAGTTATTGCTCATGTGGGTAGCACCTCCTTGTGGGAAAGTACACGGGATCAATACCTTAAGAAGAACCGATCACCATACTTAAAGGTTGTATCAGCGATGGTGAGCAATGATCTCTTGAGCCTTGTGAACACCAGGCCTCTAAAATTCTGGAAAGAAACCCTTGCTCTTCTTTGCAGTTTTGCTCAGAGAGATGAATGGACCATGCTTTGCGACACACTTGCTTCAAAACTCATGGGGGCTGGCAATACATTAGCTGCAACACTTTGTTATATATGTGCTGGAAATATTGATAAAACTGTTGAAATTTGGTCAAGGAGCCTGTCGGATGAGCACAAGGGGAAATCTTATGTTGATCTTCTTCAGGATTTGATGGAAAAAACTATTGTTCTTGCCTTGGCAACTGGGCAGAAGCGGTTTAGTGCCTCTCTGTGCAAGCTTGTTGAGAAATATGCTGAAATTTTAGCAAGTCAAGGGTTGCTGACCACAGCAATGGAGTATCTAAAACTTTTGGGTTCTGAAGAACTTTCAACTGAACTTGTGATTTTGAAGGACCGAATTGCACTGTCTACAGAAACTGAGAAAGACTTAAAGACCACTGCTTTTGAAAATTCTCAATCACACGGTGGATCCTATTATGGTGCTGATAATTCCAATTATGTGAATCATTACCAGGGTTCAGTATCCACTCATGTGCCGCCTGGTGTTCATGTGCCACCTGGTGTTTCGGGAGGTCAATATCCTGATAGCTATCAGCCGCCATATGATAATAGATATGTGCCTGGATATGGTGCTCCTGTTCCACACCAGCCACCCCAACAGCCCAATATATTTGTTCCATCACCGACTACTCAGCCCCAGCCTCCTCAGTCAAACTTCCCAAATACTTCCGGGGCACAACCTCCTGTGAGAGTATTTGAACCTCAAACTCCTGCTTTGATTAGAAATCCAGAGCAATATCAGCAGCCAACATTGGGTTCTCAATTGTATAATACAAACAACAATCCAACTTTCCCGCCTACCAATCAACCTTACCAGCCTACACCTCCTGCTCCATCTCACATTGGTCATGGCCCGAACTTACCACACGTTGCGGCACCTACCTCAAATCCAATTGGATTCATGCAAACCCCTAGTTCTGCTGGTGTTCAAAGACCTGGGGTGGGATCAATTCAACCTCCCAGTCCCCCTCAACCGCAACCTGTGCAACCGGCTGCTGCACCAGCAGCTCCACCACCTACTGTGCAGACTGCTGATACTTCAAAAGTACCTGCACAACAAATGCCTATCGTCACATCATTGACAAGGCTTTTCAATGAGACATCGGAAGCACTGGGAGGTTCACGTGCAAACCCAGCAAAGAAGCGGGAGATAGAAGACAACTCAAAGAGACTTGGTGGGTTGTTTGCGAAGTTGAACAGTGGGGACATCTCCAAAAATGCTTCTGATAAGCTCCTTCAGCTTTGTCAGGCGTTAGACAATGGTGATTTTGGTACTGCCCTTCAAATTCAGGTTCATCTGACTACTACTGAATGGGATGAATGCCAGTCCTGGTTAGGTTCACTGAAGCGAATGATCAAGACAAAGCAGAGTGTGAGATTGAGTTAA
Protein sequence

>Msa0676690

MPGCRQSGESDFGAVPLRAPKWYKRPVGASFGFGGKLVYVHNMVTEDGLVSRSSEFEAAIQNGERTLLRVLCDKKSQESVSEEERETWGFLKVMFEDDGTARTKLLTHLGFNVPSEEKDIVNDDLSQEINALGLEGTSANNTGHSKADTPPSAAAGNFVVADNANGSDKIEDGVEVEESSDPSFDDSRALVVGDYKDAVSQCISADKWADALVIAHVGSTSLWESTRDQYLKKNRSPYLKVVSAMVSNDLLSLVNTRPLKFWKETLALLCSFAQRDEWTMLCDTLASKLMGAGNTLAATLCYICAGNIDKTVEIWSRSLSDEHKGKSYVDLLQDLMEKTIVLALATGQKRFSASLCKLVEKYAEILASQGLLTTAMEYLKLLGSEELSTELVILKDRIALSTETEKDLKTTAFENSQSHGGSYYGADNSNYVNHYQGSVSTHVPPGVHVPPGVSGGQYPDSYQPPYDNRYVPGYGAPVPHQPPQQPNIFVPSPTTQPQPPQSNFPNTSGAQPPVRVFEPQTPALIRNPEQYQQPTLGSQLYNTNNNPTFPPTNQPYQPTPPAPSHIGHGPNLPHVAAPTSNPIGFMQTPSSAGVQRPGVGSIQPPSPPQPQPVQPAAAPAAPPPTVQTADTSKVPAQQMPIVTSLTRLFNETSEALGGSRANPAKKREIEDNSKRLGGLFAKLNSGDISKNASDKLLQLCQALDNGDFGTALQIQVHLTTTEWDECQSWLGSLKRMIKTKQSVRLS*