Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463590 | XP_024637924.2 | 99.631 | 1085 | 4 | 0 | 1 | 1085 | 139 | 1223 | 0.0 | 2244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463590 | sp|Q94A40|COPA1_ARATH | 81.325 | 1087 | 192 | 6 | 1 | 1085 | 139 | 1216 | 0.0 | 1847 |
| Msa1463590 | sp|Q94A40|COPA1_ARATH | 31.373 | 153 | 82 | 5 | 4 | 138 | 16 | 163 | 2.28e-11 | 72.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463590 | A0A396I9C2 | 99.631 | 1085 | 4 | 0 | 1 | 1085 | 139 | 1223 | 0.0 | 2244 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001800 | Msa1463590 | 0.821850 | 3.242809e-53 | -8.615850e-47 |
| Msa0004590 | Msa1463590 | 0.811852 | 5.689858e-51 | -8.615850e-47 |
| Msa0038110 | Msa1463590 | 0.817800 | 2.733091e-52 | -8.615850e-47 |
| Msa0043120 | Msa1463590 | 0.807086 | 6.000343e-50 | -8.615850e-47 |
| Msa0043150 | Msa1463590 | 0.818777 | 1.642276e-52 | -8.615850e-47 |
| Msa0043990 | Msa1463590 | 0.812068 | 5.106845e-51 | -8.615850e-47 |
| Msa0048990 | Msa1463590 | 0.802114 | 6.540986e-49 | -8.615850e-47 |
| Msa0085770 | Msa1463590 | 0.828629 | 8.083631e-55 | -8.615850e-47 |
| Msa0089080 | Msa1463590 | 0.822495 | 2.298074e-53 | -8.615850e-47 |
| Msa0090560 | Msa1463590 | 0.800491 | 1.406022e-48 | -8.615850e-47 |
| Msa1355250 | Msa1463590 | 0.801833 | 7.470695e-49 | -8.615850e-47 |
| Msa1359890 | Msa1463590 | -0.827973 | 1.163549e-54 | -8.615850e-47 |
| Msa1363690 | Msa1463590 | 0.807623 | 4.617716e-50 | -8.615850e-47 |
| Msa1367090 | Msa1463590 | 0.849306 | 3.519375e-60 | -8.615850e-47 |
| Msa1369180 | Msa1463590 | -0.806136 | 9.523190e-50 | -8.615850e-47 |
| Msa1370930 | Msa1463590 | 0.815224 | 1.031592e-51 | -8.615850e-47 |
| Msa1387530 | Msa1463590 | 0.811006 | 8.687275e-51 | -8.615850e-47 |
| Msa1396550 | Msa1463590 | 0.826662 | 2.398563e-54 | -8.615850e-47 |
| Msa1412500 | Msa1463590 | 0.813097 | 3.041831e-51 | -8.615850e-47 |
| Msa1413020 | Msa1463590 | 0.801388 | 9.217626e-49 | -8.615850e-47 |
| Msa1414650 | Msa1463590 | 0.812085 | 5.061840e-51 | -8.615850e-47 |
| Msa1427050 | Msa1463590 | 0.835417 | 1.698942e-56 | -8.615850e-47 |
| Msa1439740 | Msa1463590 | 0.802812 | 4.697338e-49 | -8.615850e-47 |
| Msa1447900 | Msa1463590 | 0.800382 | 1.479648e-48 | -8.615850e-47 |
| Msa1450630 | Msa1463590 | -0.807918 | 3.997542e-50 | -8.615850e-47 |
| Msa1451660 | Msa1463590 | 0.847557 | 1.072797e-59 | -8.615850e-47 |
| Msa1460970 | Msa1463590 | 0.800681 | 1.285932e-48 | -8.615850e-47 |
| Msa0604880 | Msa1463590 | -0.815577 | 8.607796e-52 | -8.615850e-47 |
| Msa0606120 | Msa1463590 | 0.989223 | 3.309368e-177 | -8.615850e-47 |
| Msa0627050 | Msa1463590 | -0.820481 | 6.704397e-53 | -8.615850e-47 |
| Msa0646190 | Msa1463590 | -0.821157 | 4.688170e-53 | -8.615850e-47 |
| Msa0647070 | Msa1463590 | 0.844837 | 5.902750e-59 | -8.615850e-47 |
| Msa0660070 | Msa1463590 | -0.800467 | 1.421897e-48 | -8.615850e-47 |
| Msa0672420 | Msa1463590 | 0.818573 | 1.827041e-52 | -8.615850e-47 |
| Msa0676200 | Msa1463590 | 0.815565 | 8.660926e-52 | -8.615850e-47 |
| Msa0679780 | Msa1463590 | -0.800837 | 1.195080e-48 | -8.615850e-47 |
| Msa0684560 | Msa1463590 | 0.819021 | 1.444952e-52 | -8.615850e-47 |
| Msa0704590 | Msa1463590 | 0.832967 | 6.986399e-56 | -8.615850e-47 |
| Msa0705810 | Msa1463590 | -0.808210 | 3.464296e-50 | -8.615850e-47 |
| Msa0715510 | Msa1463590 | 0.824490 | 7.848848e-54 | -8.615850e-47 |
| Msa0732970 | Msa1463590 | 0.839429 | 1.592788e-57 | -8.615850e-47 |
| Msa0741660 | Msa1463590 | 0.815506 | 8.928310e-52 | -8.615850e-47 |
| Msa0742090 | Msa1463590 | -0.802260 | 6.105085e-49 | -8.615850e-47 |
| Msa0773960 | Msa1463590 | 0.841063 | 5.963764e-58 | -8.615850e-47 |
| Msa0793100 | Msa1463590 | -0.801740 | 7.805990e-49 | -8.615850e-47 |
| Msa0804170 | Msa1463590 | 0.801370 | 9.295677e-49 | -8.615850e-47 |
| Msa0822740 | Msa1463590 | 0.804384 | 2.217226e-49 | -8.615850e-47 |
| Msa0842180 | Msa1463590 | 0.800039 | 1.737328e-48 | -8.615850e-47 |
| Msa0130770 | Msa1463590 | 0.838254 | 3.207120e-57 | -8.615850e-47 |
| Msa0135890 | Msa1463590 | 0.841330 | 5.073716e-58 | -8.615850e-47 |
| Msa0140140 | Msa1463590 | 0.812440 | 4.234371e-51 | -8.615850e-47 |
| Msa0147680 | Msa1463590 | 0.805807 | 1.116939e-49 | -8.615850e-47 |
| Msa0154240 | Msa1463590 | -0.804634 | 1.966490e-49 | -8.615850e-47 |
| Msa0183860 | Msa1463590 | 0.804115 | 2.521540e-49 | -8.615850e-47 |
| Msa0199720 | Msa1463590 | 0.805330 | 1.406625e-49 | -8.615850e-47 |
| Msa0215350 | Msa1463590 | 0.814519 | 1.478719e-51 | -8.615850e-47 |
| Msa1255710 | Msa1463590 | 0.816093 | 6.604886e-52 | -8.615850e-47 |
| Msa1293840 | Msa1463590 | 0.805248 | 1.463277e-49 | -8.615850e-47 |
| Msa1296130 | Msa1463590 | 0.821978 | 3.028133e-53 | -8.615850e-47 |
| Msa1328330 | Msa1463590 | 0.849204 | 3.757177e-60 | -8.615850e-47 |
| Msa1328340 | Msa1463590 | 0.857534 | 1.528853e-62 | -8.615850e-47 |
| Msa1336100 | Msa1463590 | 0.814644 | 1.386788e-51 | -8.615850e-47 |
| Msa1339200 | Msa1463590 | 0.912752 | 1.357835e-83 | -8.615850e-47 |
| Msa0369340 | Msa1463590 | 0.809251 | 2.074778e-50 | -8.615850e-47 |
| Msa0371510 | Msa1463590 | 0.832166 | 1.103805e-55 | -8.615850e-47 |
| Msa0382460 | Msa1463590 | 0.818772 | 1.646607e-52 | -8.615850e-47 |
| Msa0386300 | Msa1463590 | 0.843283 | 1.540982e-58 | -8.615850e-47 |
| Msa0419730 | Msa1463590 | 0.800318 | 1.524527e-48 | -8.615850e-47 |
| Msa0419860 | Msa1463590 | 0.820293 | 7.404334e-53 | -8.615850e-47 |
| Msa0421440 | Msa1463590 | 0.840413 | 8.827344e-58 | -8.615850e-47 |
| Msa0427420 | Msa1463590 | 0.815139 | 1.077092e-51 | -8.615850e-47 |
| Msa0427480 | Msa1463590 | 0.820248 | 7.583637e-53 | -8.615850e-47 |
| Msa0430970 | Msa1463590 | 0.817033 | 4.067938e-52 | -8.615850e-47 |
| Msa0433680 | Msa1463590 | 0.848519 | 5.821412e-60 | -8.615850e-47 |
| Msa0436100 | Msa1463590 | 0.810817 | 9.545222e-51 | -8.615850e-47 |
| Msa0450030 | Msa1463590 | 0.821003 | 5.085119e-53 | -8.615850e-47 |
| Msa0463440 | Msa1463590 | 0.813129 | 2.991929e-51 | -8.615850e-47 |
| Msa0474380 | Msa1463590 | 0.825813 | 3.819159e-54 | -8.615850e-47 |
| Msa0476960 | Msa1463590 | 0.828321 | 9.594357e-55 | -8.615850e-47 |
| Msa0477560 | Msa1463590 | 0.862588 | 4.556141e-64 | -8.615850e-47 |
| Msa0480990 | Msa1463590 | 0.854023 | 1.622344e-61 | -8.615850e-47 |
| Msa0984000 | Msa1463590 | -0.813256 | 2.806919e-51 | -8.615850e-47 |
| Msa1036250 | Msa1463590 | -0.804150 | 2.479939e-49 | -8.615850e-47 |
| Msa1040730 | Msa1463590 | 0.816088 | 6.622626e-52 | -8.615850e-47 |
| Msa1076520 | Msa1463590 | -0.800466 | 1.422349e-48 | -8.615850e-47 |
| Msa1080810 | Msa1463590 | 0.809791 | 1.589359e-50 | -8.615850e-47 |
| Msa1083160 | Msa1463590 | 0.853372 | 2.496921e-61 | -8.615850e-47 |
| Msa1105580 | Msa1463590 | 0.806368 | 8.509907e-50 | -8.615850e-47 |
| Msa0242260 | Msa1463590 | 0.800022 | 1.751203e-48 | -8.615850e-47 |
| Msa0258220 | Msa1463590 | 0.813477 | 2.509608e-51 | -8.615850e-47 |
| Msa0279000 | Msa1463590 | 0.805676 | 1.189806e-49 | -8.615850e-47 |
| Msa0280470 | Msa1463590 | 0.813947 | 1.977764e-51 | -8.615850e-47 |
| Msa0297370 | Msa1463590 | 0.801222 | 9.967157e-49 | -8.615850e-47 |
| Msa0303920 | Msa1463590 | 0.820587 | 6.341010e-53 | -8.615850e-47 |
| Msa0319690 | Msa1463590 | 0.820114 | 8.136881e-53 | -8.615850e-47 |
| Msa0333020 | Msa1463590 | 0.803119 | 4.058246e-49 | -8.615850e-47 |
| Msa0349930 | Msa1463590 | 0.809761 | 1.612943e-50 | -8.615850e-47 |
| Msa1108540 | Msa1463590 | 0.806366 | 8.518220e-50 | -8.615850e-47 |
| Msa1117740 | Msa1463590 | 0.820116 | 8.131480e-53 | -8.615850e-47 |
| Msa1120550 | Msa1463590 | 0.801866 | 7.355909e-49 | -8.615850e-47 |
| Msa1127880 | Msa1463590 | 0.811806 | 5.823964e-51 | -8.615850e-47 |
| Msa1145150 | Msa1463590 | 0.822517 | 2.270362e-53 | -8.615850e-47 |
| Msa1145560 | Msa1463590 | 0.805642 | 1.209697e-49 | -8.615850e-47 |
| Msa1152290 | Msa1463590 | 0.810447 | 1.147682e-50 | -8.615850e-47 |
| Msa1165880 | Msa1463590 | 0.817046 | 4.039425e-52 | -8.615850e-47 |
| Msa1173380 | Msa1463590 | -0.807490 | 4.927109e-50 | -8.615850e-47 |
| Msa1178570 | Msa1463590 | 0.808264 | 3.373229e-50 | -8.615850e-47 |
| Msa1179190 | Msa1463590 | 0.818909 | 1.532346e-52 | -8.615850e-47 |
| Msa1188930 | Msa1463590 | 0.800831 | 1.198482e-48 | -8.615850e-47 |
| Msa1203500 | Msa1463590 | 0.849411 | 3.291141e-60 | -8.615850e-47 |
| Msa1222980 | Msa1463590 | 0.864205 | 1.437233e-64 | -8.615850e-47 |
| Msa1223000 | Msa1463590 | 0.836123 | 1.125075e-56 | -8.615850e-47 |
| Msa0509000 | Msa1463590 | 0.811084 | 8.355333e-51 | -8.615850e-47 |
| Msa0512240 | Msa1463590 | 0.814434 | 1.543656e-51 | -8.615850e-47 |
| Msa0513230 | Msa1463590 | 0.823702 | 1.201154e-53 | -8.615850e-47 |
| Msa0518800 | Msa1463590 | 0.830045 | 3.662834e-55 | -8.615850e-47 |
| Msa0519360 | Msa1463590 | 0.819035 | 1.434730e-52 | -8.615850e-47 |
| Msa0530340 | Msa1463590 | -0.815258 | 1.013713e-51 | -8.615850e-47 |
| Msa0545230 | Msa1463590 | -0.812359 | 4.412193e-51 | -8.615850e-47 |
| Msa0549540 | Msa1463590 | -0.824165 | 9.356259e-54 | -8.615850e-47 |
| Msa0581770 | Msa1463590 | 0.850288 | 1.870429e-60 | -8.615850e-47 |
| Msa0584970 | Msa1463590 | 0.821250 | 4.461909e-53 | -8.615850e-47 |
| Msa0587180 | Msa1463590 | 0.803611 | 3.210126e-49 | -8.615850e-47 |
| Msa0898060 | Msa1463590 | 0.810152 | 1.328826e-50 | -8.615850e-47 |
| Msa0902040 | Msa1463590 | 0.831049 | 2.080551e-55 | -8.615850e-47 |
| Msa0922500 | Msa1463590 | 0.842677 | 2.233829e-58 | -8.615850e-47 |
| Msa0924490 | Msa1463590 | 0.818579 | 1.820639e-52 | -8.615850e-47 |
| Msa0945080 | Msa1463590 | 0.805199 | 1.498160e-49 | -8.615850e-47 |
| Msa0958490 | Msa1463590 | 0.839293 | 1.727698e-57 | -8.615850e-47 |
| Msa0958520 | Msa1463590 | 0.803746 | 3.008565e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463590 | MtrunA17_Chr4g0035611 | 99.631 | 1085 | 4 | 0 | 1 | 1085 | 139 | 1223 | 0.0 | 2244 |
| Msa1463590 | MtrunA17_Chr4g0035611 | 32.110 | 109 | 72 | 1 | 62 | 170 | 47 | 153 | 2.54e-11 | 68.2 |
| Msa1463590 | MtrunA17_Chr4g0035611 | 30.000 | 150 | 88 | 5 | 4 | 138 | 16 | 163 | 3.01e-11 | 68.2 |
| Msa1463590 | MtrunA17_Chr1g0197551 | 86.924 | 1086 | 133 | 4 | 1 | 1085 | 139 | 1216 | 0.0 | 1980 |
| Msa1463590 | MtrunA17_Chr1g0197551 | 30.667 | 150 | 87 | 5 | 4 | 138 | 16 | 163 | 1.83e-12 | 72.0 |
| Msa1463590 | MtrunA17_Chr4g0004241 | 23.021 | 682 | 432 | 24 | 1 | 644 | 146 | 772 | 9.58e-36 | 147 |
| Msa1463590 | MtrunA17_Chr2g0331981 | 22.694 | 683 | 433 | 23 | 1 | 644 | 146 | 772 | 5.52e-34 | 141 |
| Msa1463590 | MtrunA17_Chr4g0067151 | 28.042 | 189 | 115 | 6 | 1 | 170 | 124 | 310 | 1.35e-14 | 76.3 |
| Msa1463590 | MtrunA17_Chr2g0331961 | 28.333 | 180 | 97 | 5 | 1 | 177 | 148 | 298 | 1.09e-13 | 73.6 |
| Msa1463590 | MtrunA17_Chr3g0136971 | 25.568 | 176 | 102 | 3 | 3 | 178 | 425 | 571 | 3.44e-13 | 73.9 |
| Msa1463590 | MtrunA17_Chr6g0448921 | 26.923 | 182 | 102 | 4 | 2 | 181 | 104 | 256 | 1.29e-11 | 68.9 |
| Msa1463590 | MtrunA17_Chr2g0281451 | 25.275 | 182 | 105 | 4 | 2 | 181 | 103 | 255 | 4.73e-11 | 67.4 |
| Msa1463590 | MtrunA17_Chr4g0059031 | 29.078 | 141 | 81 | 2 | 8 | 148 | 459 | 580 | 4.94e-11 | 67.4 |
| Msa1463590 | MtrunA17_Chr2g0295791 | 24.074 | 270 | 172 | 9 | 7 | 245 | 180 | 447 | 8.60e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463590 | AT1G62020.1 | 81.325 | 1087 | 192 | 6 | 1 | 1085 | 139 | 1216 | 0.0 | 1847 |
| Msa1463590 | AT1G62020.1 | 31.373 | 153 | 82 | 5 | 4 | 138 | 16 | 163 | 2.32e-12 | 72.0 |
| Msa1463590 | AT2G21390.1 | 80.239 | 1088 | 204 | 7 | 1 | 1085 | 139 | 1218 | 0.0 | 1823 |
| Msa1463590 | AT2G21390.1 | 28.994 | 169 | 87 | 5 | 4 | 170 | 16 | 153 | 2.06e-12 | 72.4 |
| Msa1463590 | AT3G15980.3 | 24.269 | 684 | 421 | 26 | 1 | 644 | 146 | 772 | 2.76e-36 | 149 |
| Msa1463590 | AT3G15980.6 | 24.269 | 684 | 421 | 26 | 1 | 644 | 146 | 772 | 2.76e-36 | 149 |
| Msa1463590 | AT3G15980.2 | 24.269 | 684 | 421 | 26 | 1 | 644 | 146 | 772 | 2.76e-36 | 149 |
| Msa1463590 | AT3G15980.4 | 24.269 | 684 | 421 | 26 | 1 | 644 | 146 | 772 | 2.76e-36 | 149 |
| Msa1463590 | AT3G15980.7 | 24.269 | 684 | 421 | 26 | 1 | 644 | 146 | 772 | 3.08e-36 | 149 |
| Msa1463590 | AT3G15980.1 | 24.269 | 684 | 421 | 26 | 1 | 644 | 146 | 772 | 3.68e-36 | 149 |
| Msa1463590 | AT1G52360.2 | 23.977 | 684 | 423 | 26 | 1 | 644 | 190 | 816 | 7.99e-36 | 147 |
| Msa1463590 | AT1G52360.3 | 23.977 | 684 | 423 | 26 | 1 | 644 | 146 | 772 | 9.07e-36 | 147 |
| Msa1463590 | AT1G52360.4 | 23.977 | 684 | 423 | 26 | 1 | 644 | 146 | 772 | 9.08e-36 | 147 |
| Msa1463590 | AT1G52360.1 | 23.977 | 684 | 423 | 26 | 1 | 644 | 146 | 772 | 9.08e-36 | 147 |
| Msa1463590 | AT3G15980.5 | 23.521 | 693 | 427 | 25 | 1 | 644 | 146 | 784 | 1.35e-32 | 137 |
| Msa1463590 | AT1G79990.2 | 22.874 | 682 | 432 | 24 | 1 | 644 | 146 | 771 | 1.78e-32 | 137 |
| Msa1463590 | AT1G79990.1 | 22.874 | 682 | 432 | 24 | 1 | 644 | 146 | 771 | 2.45e-32 | 136 |
| Msa1463590 | AT3G49660.1 | 26.178 | 191 | 116 | 5 | 1 | 170 | 117 | 303 | 8.70e-14 | 74.3 |
| Msa1463590 | AT3G49660.1 | 28.676 | 136 | 73 | 2 | 5 | 140 | 32 | 143 | 5.14e-11 | 65.9 |
| Msa1463590 | AT5G25150.1 | 25.000 | 176 | 103 | 3 | 3 | 178 | 424 | 570 | 2.62e-12 | 71.6 |
| Msa1463590 | AT5G25150.2 | 25.000 | 176 | 103 | 3 | 3 | 178 | 424 | 570 | 2.86e-12 | 71.2 |
| Msa1463590 | AT3G16650.1 | 24.211 | 190 | 111 | 4 | 4 | 191 | 177 | 335 | 3.94e-12 | 70.5 |
| Msa1463590 | AT4G15900.1 | 25.275 | 273 | 171 | 10 | 4 | 245 | 183 | 453 | 3.25e-11 | 67.8 |
Find 289 sgRNAs with CRISPR-Local
Find 409 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATCCCTTTAACTATATT+TGG | 0.099079 | tig0043454:+4667 | Msa1463590:three_prime_UTR |
| TGGAGATGTTACTGCAATTT+TGG | 0.158568 | tig0043454:+2913 | Msa1463590:CDS |
| GCAGGGAACATGACCGATTT+TGG | 0.182012 | tig0043454:+1193 | Msa1463590:CDS |
| GTTTCACAATGCCTTATATA+TGG | 0.197876 | tig0043454:+2550 | Msa1463590:CDS |
| GTCCTTCTGTCCACGATAAA+TGG | 0.203859 | tig0043454:-3854 | Msa1463590:intergenic |
| AGATTCGTTGATTGAACTTT+TGG | 0.213440 | tig0043454:+3995 | Msa1463590:exon |
| TCATTTCCAAATATAGTTAA+AGG | 0.228514 | tig0043454:-4673 | Msa1463590:intergenic |
| GATCCTCCAAGACCTTTCTT+TGG | 0.263089 | tig0043454:-1573 | Msa1463590:intergenic |
| AGATAATCTTTCAAAATTCT+TGG | 0.266597 | tig0043454:-2444 | Msa1463590:intergenic |
| TATATAAGGCATTGTGAAAC+TGG | 0.297932 | tig0043454:-2547 | Msa1463590:intergenic |
| GAGTCTTAGGACTTTGATTC+AGG | 0.304130 | tig0043454:-1422 | Msa1463590:intergenic |
| AAAAGTTCAATCAACGAATC+TGG | 0.306067 | tig0043454:-3993 | Msa1463590:intergenic |
| GGACTGTAGGAAAGAGTCTT+AGG | 0.310531 | tig0043454:-1435 | Msa1463590:intergenic |
| AGGATAAAAGTATTCGAGTA+TGG | 0.310883 | tig0043454:+1136 | Msa1463590:CDS |
| TCGAATATCACCCATATATA+AGG | 0.311045 | tig0043454:-2561 | Msa1463590:intergenic |
| TGAGAGAATTCGGTTCAATT+TGG | 0.316825 | tig0043454:+2286 | Msa1463590:CDS |
| ACAAAACGGGAAGTACAATA+TGG | 0.319662 | tig0043454:-3886 | Msa1463590:intergenic |
| TAACTGCCATCCCAGGTGTT+GGG | 0.319739 | tig0043454:-3060 | Msa1463590:intergenic |
| GCTGCCAACAGATTCATTTC+AGG | 0.320839 | tig0043454:-1231 | Msa1463590:intergenic |
| TTCTCTCATCTTTCACGAAA+TGG | 0.322433 | tig0043454:-2271 | Msa1463590:intergenic |
| GTGGTGATTGGCCGCTCCTT+AGG | 0.325292 | tig0043454:+2762 | Msa1463590:CDS |
| AAGAGGAGGTATAAGTAAAA+AGG | 0.333127 | tig0043454:-4523 | Msa1463590:intergenic |
| TGAAAGGCTTGCAGCTGAAC+TGG | 0.333806 | tig0043454:+2667 | Msa1463590:CDS |
| ATCCAAGGATAGCACAATTA+AGG | 0.340197 | tig0043454:+1521 | Msa1463590:CDS |
| GCCGGTGGGCCTCTCACATT+TGG | 0.341441 | tig0043454:-3310 | Msa1463590:intergenic |
| GATGTTGATGGATTGGAAAA+TGG | 0.344399 | tig0043454:+2893 | Msa1463590:CDS |
| GCTGCTGATCATGCAGCTGC+TGG | 0.348665 | tig0043454:+3112 | Msa1463590:CDS |
| TTATCAGAGTGGTGAATCTA+TGG | 0.353131 | tig0043454:+4591 | Msa1463590:three_prime_UTR |
| CTTCAGCAGAGGATTGTTCT+TGG | 0.354032 | tig0043454:+1780 | Msa1463590:CDS |
| TCGAGAGCGTGTTAAGATCT+TGG | 0.357266 | tig0043454:+2580 | Msa1463590:CDS |
| AATATAGCATCAGTGGCAAT+AGG | 0.363649 | tig0043454:-1699 | Msa1463590:intergenic |
| CAGTGCATAGCTGCCCCTCC+TGG | 0.369210 | tig0043454:-3915 | Msa1463590:intergenic |
| CAGTCTTTGTGGCTCGGAAT+AGG | 0.376968 | tig0043454:+1598 | Msa1463590:CDS |
| AGCACAATTAAGGACAGTTT+TGG | 0.378507 | tig0043454:+1531 | Msa1463590:CDS |
| CACTTGCACAAAATATTCAT+AGG | 0.378984 | tig0043454:-4238 | Msa1463590:intergenic |
| GGTGATTGGGTTGAGGATAT+CGG | 0.384867 | tig0043454:+2866 | Msa1463590:CDS |
| TGGAAATACCATCTTCTGCT+TGG | 0.386501 | tig0043454:+2076 | Msa1463590:CDS |
| GCGAGTTCCTGCTGGCGTGC+TGG | 0.386545 | tig0043454:-3568 | Msa1463590:intergenic |
| ACCCCTTTGCTAAGTATAAG+AGG | 0.387526 | tig0043454:+4200 | Msa1463590:three_prime_UTR |
| TGGTGATTGGCCGCTCCTTA+GGG | 0.391348 | tig0043454:+2763 | Msa1463590:CDS |
| CATTTCCAAATATAGTTAAA+GGG | 0.393560 | tig0043454:-4672 | Msa1463590:intergenic |
| CACAGATTACAAATGGGTTT+CGG | 0.397539 | tig0043454:-3816 | Msa1463590:intergenic |
| CATTACCAGTGATGAGATAT+AGG | 0.398300 | tig0043454:-2469 | Msa1463590:intergenic |
| TCCTCAACCCAATCACCTTC+AGG | 0.403174 | tig0043454:-2860 | Msa1463590:intergenic |
| TGGTTCCCAATTGTCGGACT+TGG | 0.403221 | tig0043454:+4498 | Msa1463590:three_prime_UTR |
| CTTGCCTTGCTGTCTTAGCT+TGG | 0.403343 | tig0043454:-3738 | Msa1463590:intergenic |
| ATGATCTCTGAATCCATATC+TGG | 0.404633 | tig0043454:-3084 | Msa1463590:intergenic |
| TGGAGGATCAGCAGTCTTTG+TGG | 0.407430 | tig0043454:+1587 | Msa1463590:CDS |
| GCTCTGTAGGTCTGAGGATA+GGG | 0.408698 | tig0043454:+1743 | Msa1463590:CDS |
| AGCTTTCCTTGTTGAAGAAA+AGG | 0.412163 | tig0043454:+2153 | Msa1463590:CDS |
| ATGATGCTCCTGAAGGTGAT+TGG | 0.412669 | tig0043454:+2852 | Msa1463590:CDS |
| ACAACCTTGGTGATATAGAT+TGG | 0.414560 | tig0043454:-2053 | Msa1463590:intergenic |
| GTCCTTAATTGTGCTATCCT+TGG | 0.415036 | tig0043454:-1523 | Msa1463590:intergenic |
| TCGTGAAAGATGAGAGAATT+CGG | 0.415607 | tig0043454:+2276 | Msa1463590:CDS |
| CGACAATCAAAGGGATTGTA+TGG | 0.416201 | tig0043454:-3438 | Msa1463590:intergenic |
| GGATGGCAGTTAGCCAGATA+TGG | 0.417146 | tig0043454:+3071 | Msa1463590:CDS |
| ATCTTCTGCTTGGGCCGGGA+TGG | 0.418164 | tig0043454:+2086 | Msa1463590:CDS |
| AAGGTGATGAAGAGGGTGGA+TGG | 0.421905 | tig0043454:+2957 | Msa1463590:CDS |
| AAGGATCCAAGTCCGACAAT+TGG | 0.422459 | tig0043454:-4504 | Msa1463590:intergenic |
| CTGTACTGTGTTGTGGTGAT+TGG | 0.423016 | tig0043454:+2750 | Msa1463590:CDS |
| TTTCACAATGCCTTATATAT+GGG | 0.426532 | tig0043454:+2551 | Msa1463590:CDS |
| ATCTATATCACCAAGGTTGT+TGG | 0.426936 | tig0043454:+2056 | Msa1463590:CDS |
| TCTAATTGAGACAATTTGTA+AGG | 0.428765 | tig0043454:-3337 | Msa1463590:intergenic |
| GGAAATACCATCTTCTGCTT+GGG | 0.429343 | tig0043454:+2077 | Msa1463590:CDS |
| ATTATCCCACTGTCTCCATT+TGG | 0.430377 | tig0043454:-2014 | Msa1463590:intergenic |
| AGGGATTGTATGGAGAATAT+TGG | 0.430523 | tig0043454:-3428 | Msa1463590:intergenic |
| CTAACTGCCATCCCAGGTGT+TGG | 0.432323 | tig0043454:-3061 | Msa1463590:intergenic |
| TTCCTCTTATACTTAGCAAA+GGG | 0.434058 | tig0043454:-4202 | Msa1463590:intergenic |
| GTTGCCCCACAGATTACAAA+TGG | 0.434894 | tig0043454:-3823 | Msa1463590:intergenic |
| GGTTATAAGTCAACAACTGC+TGG | 0.434897 | tig0043454:+3376 | Msa1463590:CDS |
| CTGCAATGAGATTACTGAAC+AGG | 0.435264 | tig0043454:+3146 | Msa1463590:CDS |
| CAAGAACCAAAGAAAGGTCT+TGG | 0.436954 | tig0043454:+1567 | Msa1463590:CDS |
| TTCAATTTGGCTATAGAGAG+TGG | 0.437367 | tig0043454:+2299 | Msa1463590:CDS |
| TGAAGAGGGTGGATGGGAGC+TGG | 0.440849 | tig0043454:+2964 | Msa1463590:CDS |
| GTGTGTGAACTTTCAGTTGT+GGG | 0.441189 | tig0043454:+3937 | Msa1463590:CDS |
| CGTGTACTGACAGAAGCTTT+TGG | 0.442637 | tig0043454:-3019 | Msa1463590:intergenic |
| TGTACCACTTGCTGTTGAAA+GGG | 0.445806 | tig0043454:+3267 | Msa1463590:CDS |
| TCAACAGCAAGTGGTACAAC+TGG | 0.446758 | tig0043454:-3262 | Msa1463590:intergenic |
| AGGATCCAAGTCCGACAATT+GGG | 0.454673 | tig0043454:-4503 | Msa1463590:intergenic |
| ATATAGCATCAGTGGCAATA+GGG | 0.456315 | tig0043454:-1698 | Msa1463590:intergenic |
| ATCAAATACTGCCTTCCAAA+TGG | 0.457841 | tig0043454:+1999 | Msa1463590:CDS |
| TGACACAATGATGTCCTGTT+TGG | 0.460762 | tig0043454:-1106 | Msa1463590:intergenic |
| GGAAATTCACTGAGGCTCTT+CGG | 0.462222 | tig0043454:+3398 | Msa1463590:CDS |
| GATATACTCAGTAGCATCAA+TGG | 0.465267 | tig0043454:-2126 | Msa1463590:intergenic |
| ACAAGGCAATGCTGGTATAG+TGG | 0.465965 | tig0043454:+2403 | Msa1463590:CDS |
| CGAAACCCATTTGTAATCTG+TGG | 0.466660 | tig0043454:+3817 | Msa1463590:CDS |
| GATTACTGAACAGGCAGCTT+GGG | 0.467138 | tig0043454:+3155 | Msa1463590:CDS |
| CGGCTTGGATGTTGATGGAT+TGG | 0.468184 | tig0043454:+2886 | Msa1463590:CDS |
| TGATGCTCCTGAAGGTGATT+GGG | 0.471275 | tig0043454:+2853 | Msa1463590:CDS |
| TACCATCTTCTGCTTGGGCC+GGG | 0.471495 | tig0043454:+2082 | Msa1463590:CDS |
| TTGTACCACTTGCTGTTGAA+AGG | 0.472345 | tig0043454:+3266 | Msa1463590:CDS |
| TCCTTCTGTCCACGATAAAT+GGG | 0.473035 | tig0043454:-3853 | Msa1463590:intergenic |
| AGACTACATACTTGATGAAA+GGG | 0.474135 | tig0043454:-1815 | Msa1463590:intergenic |
| CTTATACCTCCTCTTCAAGC+TGG | 0.474648 | tig0043454:+4531 | Msa1463590:three_prime_UTR |
| CCTCCTGGGTTGGTACAAAA+CGG | 0.475085 | tig0043454:-3900 | Msa1463590:intergenic |
| TCTTCAAGCTGGAGAGAGAA+AGG | 0.476413 | tig0043454:+1277 | Msa1463590:CDS |
| TGCAGATGGAGCTGAAAAGA+AGG | 0.476844 | tig0043454:+3530 | Msa1463590:CDS |
| ACTTTCCCCTCGGGCAAAGA+TGG | 0.477374 | tig0043454:-2701 | Msa1463590:intergenic |
| AAGTCCGACAATTGGGAACC+AGG | 0.479504 | tig0043454:-4496 | Msa1463590:intergenic |
| CTCCTGGGTTGGTACAAAAC+GGG | 0.480291 | tig0043454:-3899 | Msa1463590:intergenic |
| GATATCGGCTTGGATGTTGA+TGG | 0.480401 | tig0043454:+2881 | Msa1463590:CDS |
| AGACACAAGTACTTACTATT+CGG | 0.480626 | tig0043454:+1382 | Msa1463590:CDS |
| ATAAAGAATTCACAACTTTG+TGG | 0.480719 | tig0043454:+2197 | Msa1463590:CDS |
| GTCATGCGAGGCATATTTGA+TGG | 0.481025 | tig0043454:+2785 | Msa1463590:CDS |
| AGTGCATAGCTGCCCCTCCT+GGG | 0.481089 | tig0043454:-3914 | Msa1463590:intergenic |
| GTCCCCTGGTTCCCAATTGT+CGG | 0.482324 | tig0043454:+4492 | Msa1463590:three_prime_UTR |
| ATCTAGGAACATGGATCTCA+AGG | 0.482517 | tig0043454:-3194 | Msa1463590:intergenic |
| GAAAGGCTTGCAGCTGAACT+GGG | 0.483228 | tig0043454:+2668 | Msa1463590:CDS |
| GCTCTTCGACAAGGCAATGC+TGG | 0.485293 | tig0043454:+2395 | Msa1463590:CDS |
| TGTTATGTTCCATGCCAAAC+AGG | 0.485732 | tig0043454:+1092 | Msa1463590:CDS |
| AGGTGATGAAGAGGGTGGAT+GGG | 0.486565 | tig0043454:+2958 | Msa1463590:CDS |
| CCACAGCTGGTAACTTCGCC+AGG | 0.486773 | tig0043454:+3683 | Msa1463590:CDS |
| AACTGCCATCCCAGGTGTTG+GGG | 0.487179 | tig0043454:-3059 | Msa1463590:intergenic |
| AGACACTAAGGCATGGGAAG+TGG | 0.489697 | tig0043454:+1035 | Msa1463590:intron |
| TCTTCTGCTTGGGCCGGGAT+GGG | 0.490934 | tig0043454:+2087 | Msa1463590:CDS |
| TAAGACAGCAAGGCAAGTGC+TGG | 0.491247 | tig0043454:+3744 | Msa1463590:CDS |
| CACTTGCTGTTGAAAGGGGT+TGG | 0.491446 | tig0043454:+3272 | Msa1463590:CDS |
| AAAGATCACTGGTACCGATT+GGG | 0.496714 | tig0043454:+2365 | Msa1463590:CDS |
| ATACCATCTTCTGCTTGGGC+CGG | 0.499831 | tig0043454:+2081 | Msa1463590:CDS |
| TGCGAGGCATATTTGATGGT+GGG | 0.499976 | tig0043454:+2789 | Msa1463590:CDS |
| AGATTACTGAACAGGCAGCT+TGG | 0.501054 | tig0043454:+3154 | Msa1463590:CDS |
| TGTGGCCCCAACACCTGGGA+TGG | 0.502148 | tig0043454:+3054 | Msa1463590:CDS |
| GCAAAGAACCTTGCCACAGC+TGG | 0.502678 | tig0043454:+3670 | Msa1463590:CDS |
| CGTTGAGTCAAGGAGGGAAG+TGG | 0.503101 | tig0043454:+3459 | Msa1463590:CDS |
| CATAGTCAAAGAGTATGTTC+TGG | 0.506264 | tig0043454:+3504 | Msa1463590:CDS |
| GTGTTGAAAGAATCCAAAAT+CGG | 0.506644 | tig0043454:-1206 | Msa1463590:intergenic |
| GACAATTTGTAAGGAAGTGC+CGG | 0.508613 | tig0043454:-3328 | Msa1463590:intergenic |
| GAGGGAAGTGGATGATGTAA+AGG | 0.509644 | tig0043454:+3471 | Msa1463590:CDS |
| GATGGAGAGGCGGCTGAAGA+AGG | 0.510253 | tig0043454:+2938 | Msa1463590:CDS |
| GAAACCCATTTGTAATCTGT+GGG | 0.511378 | tig0043454:+3818 | Msa1463590:CDS |
| GAACAGGAAACTTGCTCTGT+AGG | 0.512630 | tig0043454:+1730 | Msa1463590:CDS |
| CTTGACTCAACGACAATCAA+AGG | 0.512673 | tig0043454:-3448 | Msa1463590:intergenic |
| CAGCAACGTCATGTAGCCCA+TGG | 0.513892 | tig0043454:-2646 | Msa1463590:intergenic |
| TTTGGAGTGTCTGCTTCAGG+GGG | 0.513913 | tig0043454:-3001 | Msa1463590:intergenic |
| TGCTCTGTAGGTCTGAGGAT+AGG | 0.517367 | tig0043454:+1742 | Msa1463590:CDS |
| CTTTCATCAAGTATGTAGTC+TGG | 0.518350 | tig0043454:+1817 | Msa1463590:CDS |
| ATTGGTCTCGAGTAGTCTCC+TGG | 0.518802 | tig0043454:-3701 | Msa1463590:intergenic |
| CATAGCTGCCCCTCCTGGGT+TGG | 0.519545 | tig0043454:-3910 | Msa1463590:intergenic |
| CTTTGATTGTCGTTGAGTCA+AGG | 0.520507 | tig0043454:+3449 | Msa1463590:CDS |
| TATATCACTGCATCAACCCA+TGG | 0.521132 | tig0043454:+2629 | Msa1463590:CDS |
| GACTGGCAGAATGAAGATCT+AGG | 0.523582 | tig0043454:-3210 | Msa1463590:intergenic |
| CAACCTTGGTGATATAGATT+GGG | 0.523975 | tig0043454:-2052 | Msa1463590:intergenic |
| GTATGTTCTGGCTCTGCAGA+TGG | 0.525433 | tig0043454:+3516 | Msa1463590:CDS |
| TCTTTCCTATATCTCATCAC+TGG | 0.528733 | tig0043454:+2464 | Msa1463590:CDS |
| TTTCAGTAAATGTGCAGGAT+TGG | 0.530490 | tig0043454:+4362 | Msa1463590:three_prime_UTR |
| ATCTGGCTAACTGCCATCCC+AGG | 0.531022 | tig0043454:-3067 | Msa1463590:intergenic |
| TTCAATCAACGAATCTGGGC+AGG | 0.531660 | tig0043454:-3988 | Msa1463590:intergenic |
| TGTTAAGATCTTGGAGAATG+TGG | 0.534742 | tig0043454:+2589 | Msa1463590:CDS |
| AAAGTTCAATCAACGAATCT+GGG | 0.536597 | tig0043454:-3992 | Msa1463590:intergenic |
| TACAACTGGAGCGGATGAAA+AGG | 0.536605 | tig0043454:-3248 | Msa1463590:intergenic |
| GAAAGATCACTGGTACCGAT+TGG | 0.539177 | tig0043454:+2364 | Msa1463590:CDS |
| TTGACTCAACGACAATCAAA+GGG | 0.539280 | tig0043454:-3447 | Msa1463590:intergenic |
| TTAGATGAAAAGCTCAAAGC+TGG | 0.540893 | tig0043454:+3355 | Msa1463590:CDS |
| ATTGCTTATCTACAACAGAA+AGG | 0.541718 | tig0043454:+2230 | Msa1463590:CDS |
| GAAATGAATCTGTTGGCAGC+TGG | 0.542240 | tig0043454:+1234 | Msa1463590:CDS |
| CAGACTACATACTTGATGAA+AGG | 0.543032 | tig0043454:-1816 | Msa1463590:intergenic |
| TTGGCAGCTGGTCATGATAG+TGG | 0.543156 | tig0043454:+1246 | Msa1463590:CDS |
| CAAAACGGGAAGTACAATAT+GGG | 0.545307 | tig0043454:-3885 | Msa1463590:intergenic |
| TACACGGATTGTCTCATGGA+GGG | 0.547712 | tig0043454:-1922 | Msa1463590:intergenic |
| AGAGATGGTACTTTCCCCTC+GGG | 0.548228 | tig0043454:-2710 | Msa1463590:intergenic |
| ATCCCGGCCCAAGCAGAAGA+TGG | 0.548758 | tig0043454:-2084 | Msa1463590:intergenic |
| TCGGTCATGTTCCCTGCGGA+AGG | 0.548963 | tig0043454:-1187 | Msa1463590:intergenic |
| AATATGCTGCGAGTTCCTGC+TGG | 0.549069 | tig0043454:-3576 | Msa1463590:intergenic |
| ACGAAATGGAGAGCAACCTC+AGG | 0.549262 | tig0043454:-2257 | Msa1463590:intergenic |
| ATGCGAGGCATATTTGATGG+TGG | 0.549368 | tig0043454:+2788 | Msa1463590:CDS |
| ATATGCCTCGCATGACCCTA+AGG | 0.550788 | tig0043454:-2778 | Msa1463590:intergenic |
| GATCAGCAGTCTTTGTGGCT+CGG | 0.552616 | tig0043454:+1592 | Msa1463590:CDS |
| GAACCAAAGAAAGGTCTTGG+AGG | 0.554550 | tig0043454:+1570 | Msa1463590:CDS |
| CTGGTATTCAAACCTTCCGC+AGG | 0.555286 | tig0043454:+1175 | Msa1463590:CDS |
| AGCATAAAATATAGCATCAG+TGG | 0.557606 | tig0043454:-1706 | Msa1463590:intergenic |
| TCTTTATCATGTTCATAACA+TGG | 0.557803 | tig0043454:-2181 | Msa1463590:intergenic |
| GGACAATCCAGCACGCCAGC+AGG | 0.557915 | tig0043454:+3561 | Msa1463590:CDS |
| GCTGAAAAGAAGGGAAATGA+AGG | 0.558161 | tig0043454:+3540 | Msa1463590:CDS |
| TTGCTAAGTATAAGAGGAAG+GGG | 0.559075 | tig0043454:+4206 | Msa1463590:three_prime_UTR |
| TTGCCCCACAGATTACAAAT+GGG | 0.560689 | tig0043454:-3822 | Msa1463590:intergenic |
| ATCATTACTAACAGCGAAGG+CGG | 0.563818 | tig0043454:-1301 | Msa1463590:intergenic |
| TGTCATTGCTAGCAAGAAGC+TGG | 0.564334 | tig0043454:+1887 | Msa1463590:CDS |
| GAGAGATGGTACTTTCCCCT+CGG | 0.567239 | tig0043454:-2711 | Msa1463590:intergenic |
| AAGTGCTGGCTGCTGCAGAA+AGG | 0.567535 | tig0043454:+3758 | Msa1463590:CDS |
| CCATCACCTGTACTGTGTTG+TGG | 0.569317 | tig0043454:+2743 | Msa1463590:CDS |
| GATGGTATTTCCAACAACCT+TGG | 0.569731 | tig0043454:-2066 | Msa1463590:intergenic |
| TCCCACTGTCTCCATTTGGA+AGG | 0.570192 | tig0043454:-2010 | Msa1463590:intergenic |
| CTTTGCTAAGTATAAGAGGA+AGG | 0.570860 | tig0043454:+4204 | Msa1463590:three_prime_UTR |
| TAAGCACCAGCTTGAAGAGG+AGG | 0.571330 | tig0043454:-4537 | Msa1463590:intergenic |
| CTTCCTCTTATACTTAGCAA+AGG | 0.572036 | tig0043454:-4203 | Msa1463590:intergenic |
| GTACTTACTATTCGGCGACC+TGG | 0.572256 | tig0043454:+1390 | Msa1463590:CDS |
| CATCATTGTGTCAAATTCTG+AGG | 0.572764 | tig0043454:+1116 | Msa1463590:CDS |
| GCAGATGGAGCTGAAAAGAA+GGG | 0.574200 | tig0043454:+3531 | Msa1463590:CDS |
| TCCAAATGTGAGAGGCCCAC+CGG | 0.575857 | tig0043454:+3309 | Msa1463590:CDS |
| CAATCACCACAACACAGTAC+AGG | 0.578337 | tig0043454:-2749 | Msa1463590:intergenic |
| GGCGCGAAGATACGAGTGAC+TGG | 0.578464 | tig0043454:-3227 | Msa1463590:intergenic |
| GGATAAAAGTATTCGAGTAT+GGG | 0.580321 | tig0043454:+1137 | Msa1463590:CDS |
| GAAGAGCTTCAACTCCCAAT+CGG | 0.580388 | tig0043454:-2379 | Msa1463590:intergenic |
| TGGCATGATAGTCTTCAAGC+TGG | 0.580699 | tig0043454:+1266 | Msa1463590:CDS |
| TTGGGTTGAGGATATCGGCT+TGG | 0.582157 | tig0043454:+2871 | Msa1463590:CDS |
| ACCTATGTGCCCATTTATCG+TGG | 0.583139 | tig0043454:+3844 | Msa1463590:CDS |
| GGCTACATGACGTTGCTGAA+AGG | 0.584631 | tig0043454:+2651 | Msa1463590:CDS |
| CTCTGCTCTGATGTGGACGG+TGG | 0.584677 | tig0043454:+1477 | Msa1463590:CDS |
| ACAGAGCAATCCAGAAGCAT+CGG | 0.586652 | tig0043454:-3962 | Msa1463590:intergenic |
| TGATTCAGGCTTAAAGAACC+AGG | 0.586995 | tig0043454:-1408 | Msa1463590:intergenic |
| TGTGTGAACTTTCAGTTGTG+GGG | 0.590233 | tig0043454:+3938 | Msa1463590:CDS |
| TCTAGGAACATGGATCTCAA+GGG | 0.591542 | tig0043454:-3193 | Msa1463590:intergenic |
| TCAATTTGGCTATAGAGAGT+GGG | 0.592537 | tig0043454:+2300 | Msa1463590:CDS |
| GATATGCAAGAACCAAAGAA+AGG | 0.593716 | tig0043454:+1561 | Msa1463590:CDS |
| GGCTGAAGAAGGTGATGAAG+AGG | 0.593752 | tig0043454:+2949 | Msa1463590:CDS |
| AACGTTCCATCTTTGCCCGA+GGG | 0.594187 | tig0043454:+2695 | Msa1463590:CDS |
| GCCCATTTATCGTGGACAGA+AGG | 0.594536 | tig0043454:+3852 | Msa1463590:CDS |
| CAACGTTCCATCTTTGCCCG+AGG | 0.595129 | tig0043454:+2694 | Msa1463590:CDS |
| GTTATAAGTCAACAACTGCT+GGG | 0.595561 | tig0043454:+3377 | Msa1463590:CDS |
| CAACCCCTTTCAACAGCAAG+TGG | 0.595791 | tig0043454:-3271 | Msa1463590:intergenic |
| TCATTACTAACAGCGAAGGC+GGG | 0.596728 | tig0043454:-1300 | Msa1463590:intergenic |
| CAATGATGTCCTGTTTGGCA+TGG | 0.597090 | tig0043454:-1101 | Msa1463590:intergenic |
| AATTCTTCTCTGCTCTGATG+TGG | 0.597935 | tig0043454:+1470 | Msa1463590:CDS |
| CGAAGTTACCAGCTGTGGCA+AGG | 0.598049 | tig0043454:-3678 | Msa1463590:intergenic |
| TGGGAAGTGGATACTTTGAG+AGG | 0.598556 | tig0043454:+1048 | Msa1463590:CDS |
| ACATCCTGAAATGAATCTGT+TGG | 0.600113 | tig0043454:+1227 | Msa1463590:CDS |
| AGCTAAGCACCAGCTTGAAG+AGG | 0.602760 | tig0043454:-4540 | Msa1463590:intergenic |
| CCTGGCGAAGTTACCAGCTG+TGG | 0.605148 | tig0043454:-3683 | Msa1463590:intergenic |
| TGGGATGCAACAAAGAGGAC+TGG | 0.606544 | tig0043454:+1156 | Msa1463590:CDS |
| TCCTGAAGGTGATTGGGTTG+AGG | 0.607105 | tig0043454:+2859 | Msa1463590:CDS |
| CTTCTCTGCTCTGATGTGGA+CGG | 0.607520 | tig0043454:+1474 | Msa1463590:CDS |
| ATATCACTGCATCAACCCAT+GGG | 0.608613 | tig0043454:+2630 | Msa1463590:CDS |
| TTTGCTAAGTATAAGAGGAA+GGG | 0.609289 | tig0043454:+4205 | Msa1463590:three_prime_UTR |
| AAAGGCTTGCAGCTGAACTG+GGG | 0.609705 | tig0043454:+2669 | Msa1463590:CDS |
| CCACAACACAGTACAGGTGA+TGG | 0.610831 | tig0043454:-2743 | Msa1463590:intergenic |
| AGCAACGTCATGTAGCCCAT+GGG | 0.612640 | tig0043454:-2645 | Msa1463590:intergenic |
| TGTGTGTGAACTTTCAGTTG+TGG | 0.612977 | tig0043454:+3936 | Msa1463590:CDS |
| AGTCCGACAATTGGGAACCA+GGG | 0.613444 | tig0043454:-4495 | Msa1463590:intergenic |
| ATCTTCAGACACCTCACTTG+AGG | 0.616144 | tig0043454:+3611 | Msa1463590:CDS |
| TGCCTTCCAAATGGAGACAG+TGG | 0.616943 | tig0043454:+2008 | Msa1463590:CDS |
| AATTTGTAAGGAAGTGCCGG+TGG | 0.616973 | tig0043454:-3325 | Msa1463590:intergenic |
| TGAAGTCAAGAATGATGTCA+TGG | 0.619645 | tig0043454:+2523 | Msa1463590:CDS |
| GTTAAGATCTTGGAGAATGT+GGG | 0.619677 | tig0043454:+2590 | Msa1463590:CDS |
| GATGGAGGTATCAAGAGAGA+TGG | 0.619919 | tig0043454:-2725 | Msa1463590:intergenic |
| GCCTTCCAAATGGAGACAGT+GGG | 0.622318 | tig0043454:+2009 | Msa1463590:CDS |
| TGAGTTGTACTGCATATCCA+AGG | 0.622737 | tig0043454:+1506 | Msa1463590:CDS |
| TTGGAGTGTCTGCTTCAGGG+GGG | 0.623147 | tig0043454:-3000 | Msa1463590:intergenic |
| GGAGTTGAAGCTCTTCGACA+AGG | 0.623731 | tig0043454:+2386 | Msa1463590:CDS |
| GATTGTCGTTGAGTCAAGGA+GGG | 0.629168 | tig0043454:+3453 | Msa1463590:CDS |
| CTAGGAACATGGATCTCAAG+GGG | 0.632378 | tig0043454:-3192 | Msa1463590:intergenic |
| CAAAAGCTTCTGTCAGTACA+CGG | 0.632978 | tig0043454:+3020 | Msa1463590:CDS |
| GAAGAAGGTGATGAAGAGGG+TGG | 0.634216 | tig0043454:+2953 | Msa1463590:CDS |
| TGATATAAGCAAGAGGCAAG+TGG | 0.637255 | tig0043454:-2613 | Msa1463590:intergenic |
| AGAATCATTACTAACAGCGA+AGG | 0.639502 | tig0043454:-1304 | Msa1463590:intergenic |
| AAGGAATATGACTGATGCCA+CGG | 0.640040 | tig0043454:+3777 | Msa1463590:CDS |
| GTACCACTTGCTGTTGAAAG+GGG | 0.640358 | tig0043454:+3268 | Msa1463590:CDS |
| AAACTTGCTCTGTAGGTCTG+AGG | 0.640502 | tig0043454:+1737 | Msa1463590:CDS |
| TAGTGGAGTATGCATATCAG+AGG | 0.641236 | tig0043454:+2420 | Msa1463590:CDS |
| TTATATTTGATCTTCAGCAG+AGG | 0.642399 | tig0043454:+1769 | Msa1463590:CDS |
| AGCGGAGCCTGGGATGACAA+TGG | 0.646326 | tig0043454:+1948 | Msa1463590:CDS |
| CCGCTCCTTAGGGTCATGCG+AGG | 0.646346 | tig0043454:+2773 | Msa1463590:CDS |
| GACTACATACTTGATGAAAG+GGG | 0.648551 | tig0043454:-1814 | Msa1463590:intergenic |
| AAGGCTTGCAGCTGAACTGG+GGG | 0.651223 | tig0043454:+2670 | Msa1463590:CDS |
| CAATTGATGAGAAAGATCAC+TGG | 0.652291 | tig0043454:+2354 | Msa1463590:CDS |
| AAAACCAAGCTAAGACAGCA+AGG | 0.652934 | tig0043454:+3734 | Msa1463590:CDS |
| GTCCGACAATTGGGAACCAG+GGG | 0.655477 | tig0043454:-4494 | Msa1463590:intergenic |
| CAACACAGTACAGGTGATGG+AGG | 0.656295 | tig0043454:-2740 | Msa1463590:intergenic |
| GCTGAAGAAGGTGATGAAGA+GGG | 0.656878 | tig0043454:+2950 | Msa1463590:CDS |
| AGCAAGTGGTACAACTGGAG+CGG | 0.656994 | tig0043454:-3257 | Msa1463590:intergenic |
| AAGTATTAGAAAGTATACCA+TGG | 0.657837 | tig0043454:-4174 | Msa1463590:intergenic |
| TCGTCTAGTCCAAATGTGAG+AGG | 0.657993 | tig0043454:+3301 | Msa1463590:CDS |
| TCCACGATAAATGGGCACAT+AGG | 0.658647 | tig0043454:-3845 | Msa1463590:intergenic |
| TCCTCTTATACTTAGCAAAG+GGG | 0.661578 | tig0043454:-4201 | Msa1463590:intergenic |
| TGATTGTCGTTGAGTCAAGG+AGG | 0.661965 | tig0043454:+3452 | Msa1463590:CDS |
| GAGTTTGATGATGCTCCTGA+AGG | 0.666246 | tig0043454:+2845 | Msa1463590:CDS |
| GGGAAGTGGATACTTTGAGA+GGG | 0.667352 | tig0043454:+1049 | Msa1463590:CDS |
| CCTCGCATGACCCTAAGGAG+CGG | 0.668842 | tig0043454:-2773 | Msa1463590:intergenic |
| GAAGTCAAGAATGATGTCAT+GGG | 0.672095 | tig0043454:+2524 | Msa1463590:CDS |
| GTGTGAACTTTCAGTTGTGG+GGG | 0.672377 | tig0043454:+3939 | Msa1463590:CDS |
| TTACACGGATTGTCTCATGG+AGG | 0.677462 | tig0043454:-1923 | Msa1463590:intergenic |
| GTTAAAGGGATAGCTTACAA+TGG | 0.677892 | tig0043454:-4658 | Msa1463590:intergenic |
| AACAAAGCTAGCCTCAAGTG+AGG | 0.677918 | tig0043454:-3622 | Msa1463590:intergenic |
| ACGTTCCATCTTTGCCCGAG+GGG | 0.680200 | tig0043454:+2696 | Msa1463590:CDS |
| TGGTATTCAAACCTTCCGCA+GGG | 0.680597 | tig0043454:+1176 | Msa1463590:CDS |
| AGAATGAAGATCTAGGAACA+TGG | 0.681471 | tig0043454:-3203 | Msa1463590:intergenic |
| GATGCAGTGATATAAGCAAG+AGG | 0.683682 | tig0043454:-2620 | Msa1463590:intergenic |
| CATGAGTTACATTATCAGAG+TGG | 0.683733 | tig0043454:+4580 | Msa1463590:three_prime_UTR |
| ATTTGTAAGGAAGTGCCGGT+GGG | 0.683766 | tig0043454:-3324 | Msa1463590:intergenic |
| GAGTATGGGATGCAACAAAG+AGG | 0.685401 | tig0043454:+1151 | Msa1463590:CDS |
| AGGTGTCTGAAGATTGCAGT+GGG | 0.688553 | tig0043454:-3602 | Msa1463590:intergenic |
| TGCTAAGTATAAGAGGAAGG+GGG | 0.692341 | tig0043454:+4207 | Msa1463590:three_prime_UTR |
| ACAACAGAAAGGATTTCCTG+AGG | 0.693986 | tig0043454:+2241 | Msa1463590:CDS |
| AAACCCATTTGTAATCTGTG+GGG | 0.712530 | tig0043454:+3819 | Msa1463590:CDS |
| CGTCCCAATCTATATCACCA+AGG | 0.716874 | tig0043454:+2049 | Msa1463590:CDS |
| AAAATCGGTCATGTTCCCTG+CGG | 0.740048 | tig0043454:-1191 | Msa1463590:intergenic |
| GAAATCATAGTTCAACTCCG+TGG | 0.744474 | tig0043454:-3794 | Msa1463590:intergenic |
| AACTGCTGGGAAATTCACTG+AGG | 0.758138 | tig0043454:+3390 | Msa1463590:CDS |
| TAGGAACATGGATCTCAAGG+GGG | 0.765471 | tig0043454:-3191 | None:intergenic |
| GAGGTGTCTGAAGATTGCAG+TGG | 0.771584 | tig0043454:-3603 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATCTCTTTTAATAATTGA+AGG | + | tig0043454:825-844 | Msa1463590:intron | 15.0% |
| !! | ACAGAGAATAAATTTAATTA+GGG | - | tig0043454:1011-1030 | Msa1463590:intergenic | 15.0% |
| !! | AACAGAGAATAAATTTAATT+AGG | - | tig0043454:1012-1031 | Msa1463590:intergenic | 15.0% |
| !!! | TTAATGATAATTTTTGTTTC+AGG | + | tig0043454:4029-4048 | Msa1463590:three_prime_UTR | 15.0% |
| !!! | TCTTTATATATTTTTTTCCA+TGG | + | tig0043454:4157-4176 | Msa1463590:three_prime_UTR | 15.0% |
| !! | AAAAATGAATTCAACATAAT+AGG | - | tig0043454:4273-4292 | Msa1463590:intergenic | 15.0% |
| !! | ATTTGAAAAGGTTCTTATAA+GGG | - | tig0043454:735-754 | Msa1463590:intergenic | 20.0% |
| !! | AATTTGAAAAGGTTCTTATA+AGG | - | tig0043454:736-755 | Msa1463590:intergenic | 20.0% |
| !! | ATATACCTTGTAATTTGAAA+AGG | - | tig0043454:747-766 | Msa1463590:intergenic | 20.0% |
| !!! | CAAAAGTATCCATAATTAAA+TGG | + | tig0043454:780-799 | Msa1463590:intron | 20.0% |
| !! | TAATTCTCTCCATTTAATTA+TGG | - | tig0043454:792-811 | Msa1463590:intergenic | 20.0% |
| !! | TAATAATTGAAGGATAACTT+TGG | + | tig0043454:835-854 | Msa1463590:intron | 20.0% |
| !!! | TTTTCTTAATTATTGTGCAT+TGG | + | tig0043454:898-917 | Msa1463590:intron | 20.0% |
| !! | AGATAATCTTTCAAAATTCT+TGG | - | tig0043454:2447-2466 | Msa1463590:intergenic | 20.0% |
| !!! | ACATTTTGAAGCTTTAATAA+AGG | + | tig0043454:4314-4333 | Msa1463590:three_prime_UTR | 20.0% |
| !! | CATTTCCAAATATAGTTAAA+GGG | - | tig0043454:4675-4694 | Msa1463590:intergenic | 20.0% |
| !! | TCATTTCCAAATATAGTTAA+AGG | - | tig0043454:4676-4695 | Msa1463590:intergenic | 20.0% |
| !!! | TTTTAAGATATTCGTGATTC+AGG | - | tig0043454:415-434 | Msa1463590:intergenic | 25.0% |
| ! | GTATGAATATTTGTAACAAC+TGG | - | tig0043454:546-565 | Msa1463590:intergenic | 25.0% |
| ! | AAGGGACAAAAAATTTACAA+GGG | - | tig0043454:717-736 | Msa1463590:intergenic | 25.0% |
| ! | TAAGGGACAAAAAATTTACA+AGG | - | tig0043454:718-737 | Msa1463590:intergenic | 25.0% |
| !! | AAGAACCTTTTCAAATTACA+AGG | + | tig0043454:739-758 | Msa1463590:intron | 25.0% |
| !!! | TAATTATTGTGCATTGGTTA+AGG | + | tig0043454:904-923 | Msa1463590:intron | 25.0% |
| ! | ATTTAATTAGGGAATAGAGA+AGG | - | tig0043454:1000-1019 | Msa1463590:intergenic | 25.0% |
| ! | TCTTTATCATGTTCATAACA+TGG | - | tig0043454:2184-2203 | Msa1463590:intergenic | 25.0% |
| ! | ATAAAGAATTCACAACTTTG+TGG | + | tig0043454:2197-2216 | Msa1463590:CDS | 25.0% |
| ! | TTTCACAATGCCTTATATAT+GGG | + | tig0043454:2551-2570 | Msa1463590:CDS | 25.0% |
| ! | TCTAATTGAGACAATTTGTA+AGG | - | tig0043454:3340-3359 | Msa1463590:intergenic | 25.0% |
| !! | AAGTATTAGAAAGTATACCA+TGG | - | tig0043454:4177-4196 | Msa1463590:intergenic | 25.0% |
| ! | AATGCTCATGATAGAAAAAA+TGG | - | tig0043454:4402-4421 | Msa1463590:intergenic | 25.0% |
| !!! | ACCTGTATATCTGTTTTAAC+TGG | + | tig0043454:51-70 | Msa1463590:five_prime_UTR | 30.0% |
| !!! | CCTGTATATCTGTTTTAACT+GGG | + | tig0043454:52-71 | Msa1463590:five_prime_UTR | 30.0% |
| ATGAAGCACACATAACATAA+TGG | - | tig0043454:83-102 | Msa1463590:intergenic | 30.0% | |
| AATCGCAAAATATCATCTGA+AGG | - | tig0043454:198-217 | Msa1463590:intergenic | 30.0% | |
| ATTCATACAACAGTGTTTAG+AGG | + | tig0043454:558-577 | Msa1463590:intron | 30.0% | |
| AGGGACAAAAAATTTACAAG+GGG | - | tig0043454:716-735 | Msa1463590:intergenic | 30.0% | |
| TGGTTAAGGTCTTACATATA+AGG | + | tig0043454:918-937 | Msa1463590:intron | 30.0% | |
| TAAGGTCTTACATATAAGGA+CGG | + | tig0043454:922-941 | Msa1463590:intron | 30.0% | |
| !! | AGGATAAAAGTATTCGAGTA+TGG | + | tig0043454:1136-1155 | Msa1463590:CDS | 30.0% |
| !! | GGATAAAAGTATTCGAGTAT+GGG | + | tig0043454:1137-1156 | Msa1463590:CDS | 30.0% |
| GTGTTGAAAGAATCCAAAAT+CGG | - | tig0043454:1209-1228 | Msa1463590:intergenic | 30.0% | |
| ATTCATAGAAACGCAAAAAG+CGG | - | tig0043454:1347-1366 | Msa1463590:intergenic | 30.0% | |
| AGACACAAGTACTTACTATT+CGG | + | tig0043454:1382-1401 | Msa1463590:CDS | 30.0% | |
| ! | AGAAGAATTGCATTTTCAGT+AGG | - | tig0043454:1459-1478 | Msa1463590:intergenic | 30.0% |
| !! | AATTAAGGACAGTTTTGGTA+GGG | + | tig0043454:1536-1555 | Msa1463590:CDS | 30.0% |
| !!! | TCAGGTTTTTTAAAAGGACT+TGG | - | tig0043454:1650-1669 | Msa1463590:intergenic | 30.0% |
| !!! | CGTTCTTCAGGTTTTTTAAA+AGG | - | tig0043454:1656-1675 | Msa1463590:intergenic | 30.0% |
| AGCATAAAATATAGCATCAG+TGG | - | tig0043454:1709-1728 | Msa1463590:intergenic | 30.0% | |
| ! | ACTGATGCTATATTTTATGC+TGG | + | tig0043454:1708-1727 | Msa1463590:CDS | 30.0% |
| TTATATTTGATCTTCAGCAG+AGG | + | tig0043454:1769-1788 | Msa1463590:CDS | 30.0% | |
| AGACTACATACTTGATGAAA+GGG | - | tig0043454:1818-1837 | Msa1463590:intergenic | 30.0% | |
| ATTGCTTATCTACAACAGAA+AGG | + | tig0043454:2230-2249 | Msa1463590:CDS | 30.0% | |
| !! | TATATAAGGCATTGTGAAAC+TGG | - | tig0043454:2550-2569 | Msa1463590:intergenic | 30.0% |
| GTTTCACAATGCCTTATATA+TGG | + | tig0043454:2550-2569 | Msa1463590:CDS | 30.0% | |
| TCGAATATCACCCATATATA+AGG | - | tig0043454:2564-2583 | Msa1463590:intergenic | 30.0% | |
| AAAGTTCAATCAACGAATCT+GGG | - | tig0043454:3995-4014 | Msa1463590:intergenic | 30.0% | |
| AAAAGTTCAATCAACGAATC+TGG | - | tig0043454:3996-4015 | Msa1463590:intergenic | 30.0% | |
| !! | AGATTCGTTGATTGAACTTT+TGG | + | tig0043454:3995-4014 | Msa1463590:exon | 30.0% |
| TTCCTCTTATACTTAGCAAA+GGG | - | tig0043454:4205-4224 | Msa1463590:intergenic | 30.0% | |
| TTTGCTAAGTATAAGAGGAA+GGG | + | tig0043454:4205-4224 | Msa1463590:three_prime_UTR | 30.0% | |
| CACTTGCACAAAATATTCAT+AGG | - | tig0043454:4241-4260 | Msa1463590:intergenic | 30.0% | |
| ! | AAGAGGAGGTATAAGTAAAA+AGG | - | tig0043454:4526-4545 | Msa1463590:intergenic | 30.0% |
| GCTATCCCTTTAACTATATT+TGG | + | tig0043454:4667-4686 | Msa1463590:three_prime_UTR | 30.0% | |
| CCCAGTTAAAACAGATATAC+AGG | - | tig0043454:55-74 | Msa1463590:intergenic | 35.0% | |
| !! | TATTGGTTCTCTCAAAAGGA+AGG | + | tig0043454:164-183 | Msa1463590:CDS | 35.0% |
| ! | CAGATGAACACTGATCTTTT+TGG | + | tig0043454:222-241 | Msa1463590:CDS | 35.0% |
| ! | ATGAACACTGATCTTTTTGG+TGG | + | tig0043454:225-244 | Msa1463590:CDS | 35.0% |
| TGCAGTTGTTAAGTATGTGT+TGG | + | tig0043454:254-273 | Msa1463590:CDS | 35.0% | |
| GTTGTTAAGTATGTGTTGGA+AGG | + | tig0043454:258-277 | Msa1463590:CDS | 35.0% | |
| GCAGCGTAAAGTAAATAACA+AGG | - | tig0043454:393-412 | Msa1463590:intergenic | 35.0% | |
| TCTATTAAAGTTCAGCTCAC+TGG | + | tig0043454:456-475 | Msa1463590:intron | 35.0% | |
| CTATTAAAGTTCAGCTCACT+GGG | + | tig0043454:457-476 | Msa1463590:intron | 35.0% | |
| GGGACAAAAAATTTACAAGG+GGG | - | tig0043454:715-734 | Msa1463590:intergenic | 35.0% | |
| ! | TTCTCTGTTTTCAGACACTA+AGG | + | tig0043454:1023-1042 | Msa1463590:intron | 35.0% |
| CATCATTGTGTCAAATTCTG+AGG | + | tig0043454:1116-1135 | Msa1463590:CDS | 35.0% | |
| ACATCCTGAAATGAATCTGT+TGG | + | tig0043454:1227-1246 | Msa1463590:CDS | 35.0% | |
| AGAATCATTACTAACAGCGA+AGG | - | tig0043454:1307-1326 | Msa1463590:intergenic | 35.0% | |
| ATCCAAGGATAGCACAATTA+AGG | + | tig0043454:1521-1540 | Msa1463590:CDS | 35.0% | |
| ! | AGCACAATTAAGGACAGTTT+TGG | + | tig0043454:1531-1550 | Msa1463590:CDS | 35.0% |
| !! | CAATTAAGGACAGTTTTGGT+AGG | + | tig0043454:1535-1554 | Msa1463590:CDS | 35.0% |
| !! | ATTAAGGACAGTTTTGGTAG+GGG | + | tig0043454:1537-1556 | Msa1463590:CDS | 35.0% |
| GATATGCAAGAACCAAAGAA+AGG | + | tig0043454:1561-1580 | Msa1463590:CDS | 35.0% | |
| ! | TTTTAACAAGCTCGTTCTTC+AGG | - | tig0043454:1668-1687 | Msa1463590:intergenic | 35.0% |
| ATATAGCATCAGTGGCAATA+GGG | - | tig0043454:1701-1720 | Msa1463590:intergenic | 35.0% | |
| AATATAGCATCAGTGGCAAT+AGG | - | tig0043454:1702-1721 | Msa1463590:intergenic | 35.0% | |
| ! | GCTATATTTTATGCTGGAAC+AGG | + | tig0043454:1714-1733 | Msa1463590:CDS | 35.0% |
| GACTACATACTTGATGAAAG+GGG | - | tig0043454:1817-1836 | Msa1463590:intergenic | 35.0% | |
| CAGACTACATACTTGATGAA+AGG | - | tig0043454:1819-1838 | Msa1463590:intergenic | 35.0% | |
| CTTTCATCAAGTATGTAGTC+TGG | + | tig0043454:1817-1836 | Msa1463590:CDS | 35.0% | |
| !! | TTTTTACACGGATTGTCTCA+TGG | - | tig0043454:1929-1948 | Msa1463590:intergenic | 35.0% |
| AAAAATACCATTGTCATCCC+AGG | - | tig0043454:1958-1977 | Msa1463590:intergenic | 35.0% | |
| ATCAAATACTGCCTTCCAAA+TGG | + | tig0043454:1999-2018 | Msa1463590:CDS | 35.0% | |
| CAGTGGGATAATAAAAACAC+TGG | + | tig0043454:2025-2044 | Msa1463590:CDS | 35.0% | |
| ! | CAACCTTGGTGATATAGATT+GGG | - | tig0043454:2055-2074 | Msa1463590:intergenic | 35.0% |
| ! | ACAACCTTGGTGATATAGAT+TGG | - | tig0043454:2056-2075 | Msa1463590:intergenic | 35.0% |
| ATCTATATCACCAAGGTTGT+TGG | + | tig0043454:2056-2075 | Msa1463590:CDS | 35.0% | |
| GATATACTCAGTAGCATCAA+TGG | - | tig0043454:2129-2148 | Msa1463590:intergenic | 35.0% | |
| AGCTTTCCTTGTTGAAGAAA+AGG | + | tig0043454:2153-2172 | Msa1463590:CDS | 35.0% | |
| ! | GTCATACCTTTTCTTCAACA+AGG | - | tig0043454:2162-2181 | Msa1463590:intergenic | 35.0% |
| TTCTCTCATCTTTCACGAAA+TGG | - | tig0043454:2274-2293 | Msa1463590:intergenic | 35.0% | |
| TCGTGAAAGATGAGAGAATT+CGG | + | tig0043454:2276-2295 | Msa1463590:CDS | 35.0% | |
| TGAGAGAATTCGGTTCAATT+TGG | + | tig0043454:2286-2305 | Msa1463590:CDS | 35.0% | |
| TTCAATTTGGCTATAGAGAG+TGG | + | tig0043454:2299-2318 | Msa1463590:CDS | 35.0% | |
| TCAATTTGGCTATAGAGAGT+GGG | + | tig0043454:2300-2319 | Msa1463590:CDS | 35.0% | |
| CAATTGATGAGAAAGATCAC+TGG | + | tig0043454:2354-2373 | Msa1463590:CDS | 35.0% | |
| TCTTTCCTATATCTCATCAC+TGG | + | tig0043454:2464-2483 | Msa1463590:CDS | 35.0% | |
| CATTACCAGTGATGAGATAT+AGG | - | tig0043454:2472-2491 | Msa1463590:intergenic | 35.0% | |
| TGAAGTCAAGAATGATGTCA+TGG | + | tig0043454:2523-2542 | Msa1463590:CDS | 35.0% | |
| GAAGTCAAGAATGATGTCAT+GGG | + | tig0043454:2524-2543 | Msa1463590:CDS | 35.0% | |
| TGTTAAGATCTTGGAGAATG+TGG | + | tig0043454:2589-2608 | Msa1463590:CDS | 35.0% | |
| GTTAAGATCTTGGAGAATGT+GGG | + | tig0043454:2590-2609 | Msa1463590:CDS | 35.0% | |
| !! | GATGTTGATGGATTGGAAAA+TGG | + | tig0043454:2893-2912 | Msa1463590:CDS | 35.0% |
| ! | TGGAGATGTTACTGCAATTT+TGG | + | tig0043454:2913-2932 | Msa1463590:CDS | 35.0% |
| ! | GTTACTGCAATTTTGGATGA+TGG | + | tig0043454:2920-2939 | Msa1463590:CDS | 35.0% |
| ATGATCTCTGAATCCATATC+TGG | - | tig0043454:3087-3106 | Msa1463590:intergenic | 35.0% | |
| AGAATGAAGATCTAGGAACA+TGG | - | tig0043454:3206-3225 | Msa1463590:intergenic | 35.0% | |
| TTAGATGAAAAGCTCAAAGC+TGG | + | tig0043454:3355-3374 | Msa1463590:CDS | 35.0% | |
| GTTATAAGTCAACAACTGCT+GGG | + | tig0043454:3377-3396 | Msa1463590:CDS | 35.0% | |
| AGGGATTGTATGGAGAATAT+TGG | - | tig0043454:3431-3450 | Msa1463590:intergenic | 35.0% | |
| TTGACTCAACGACAATCAAA+GGG | - | tig0043454:3450-3469 | Msa1463590:intergenic | 35.0% | |
| ! | CATAGTCAAAGAGTATGTTC+TGG | + | tig0043454:3504-3523 | Msa1463590:CDS | 35.0% |
| ! | CACAGATTACAAATGGGTTT+CGG | - | tig0043454:3819-3838 | Msa1463590:intergenic | 35.0% |
| GAAACCCATTTGTAATCTGT+GGG | + | tig0043454:3818-3837 | Msa1463590:CDS | 35.0% | |
| AAACCCATTTGTAATCTGTG+GGG | + | tig0043454:3819-3838 | Msa1463590:CDS | 35.0% | |
| ! | CAAAACGGGAAGTACAATAT+GGG | - | tig0043454:3888-3907 | Msa1463590:intergenic | 35.0% |
| ! | ACAAAACGGGAAGTACAATA+TGG | - | tig0043454:3889-3908 | Msa1463590:intergenic | 35.0% |
| ! | GTTGATTGAACTTTTGGATC+AGG | + | tig0043454:4001-4020 | Msa1463590:exon | 35.0% |
| ! | TTGAACTTTTGGATCAGGAA+CGG | + | tig0043454:4006-4025 | Msa1463590:three_prime_UTR | 35.0% |
| TCCTCTTATACTTAGCAAAG+GGG | - | tig0043454:4204-4223 | Msa1463590:intergenic | 35.0% | |
| CTTCCTCTTATACTTAGCAA+AGG | - | tig0043454:4206-4225 | Msa1463590:intergenic | 35.0% | |
| CTTTGCTAAGTATAAGAGGA+AGG | + | tig0043454:4204-4223 | Msa1463590:three_prime_UTR | 35.0% | |
| TTGCTAAGTATAAGAGGAAG+GGG | + | tig0043454:4206-4225 | Msa1463590:three_prime_UTR | 35.0% | |
| ! | TCTGTTTTCAGTAAATGTGC+AGG | + | tig0043454:4357-4376 | Msa1463590:three_prime_UTR | 35.0% |
| TTTCAGTAAATGTGCAGGAT+TGG | + | tig0043454:4362-4381 | Msa1463590:three_prime_UTR | 35.0% | |
| CATGAGTTACATTATCAGAG+TGG | + | tig0043454:4580-4599 | Msa1463590:three_prime_UTR | 35.0% | |
| TTATCAGAGTGGTGAATCTA+TGG | + | tig0043454:4591-4610 | Msa1463590:three_prime_UTR | 35.0% | |
| GTTAAAGGGATAGCTTACAA+TGG | - | tig0043454:4661-4680 | Msa1463590:intergenic | 35.0% | |
| ATGATCAAACCATTCGCATC+TGG | + | tig0043454:13-32 | Msa1463590:five_prime_UTR | 40.0% | |
| ! | AAACCATTCGCATCTGGAAT+TGG | + | tig0043454:19-38 | Msa1463590:five_prime_UTR | 40.0% |
| TGCTTCATTCCATCCAAAAG+AGG | + | tig0043454:95-114 | Msa1463590:CDS | 40.0% | |
| ! | CGACAATATCCTCTTTTGGA+TGG | - | tig0043454:107-126 | Msa1463590:intergenic | 40.0% |
| ! | GACACGACAATATCCTCTTT+TGG | - | tig0043454:111-130 | Msa1463590:intergenic | 40.0% |
| ! | ACTGTTCGTGTTTGGGATAT+TGG | + | tig0043454:147-166 | Msa1463590:CDS | 40.0% |
| !! | GGGATATTGGTTCTCTCAAA+AGG | + | tig0043454:160-179 | Msa1463590:CDS | 40.0% |
| CGCAAAATATCATCTGAAGG+AGG | - | tig0043454:195-214 | Msa1463590:intergenic | 40.0% | |
| ATGACCGTCAAGTGAAACTT+TGG | + | tig0043454:346-365 | Msa1463590:CDS | 40.0% | |
| TCCTCCAAAGTTTCACTTGA+CGG | - | tig0043454:353-372 | Msa1463590:intergenic | 40.0% | |
| ! | GTGAAACTTTGGAGGATGAA+TGG | + | tig0043454:357-376 | Msa1463590:CDS | 40.0% |
| TACAGCATCAAGACAATGCA+TGG | - | tig0043454:523-542 | Msa1463590:intergenic | 40.0% | |
| ! | TGTTTTCAGACACTAAGGCA+TGG | + | tig0043454:1028-1047 | Msa1463590:intron | 40.0% |
| ! | GTTTTCAGACACTAAGGCAT+GGG | + | tig0043454:1029-1048 | Msa1463590:intron | 40.0% |
| TGTTATGTTCCATGCCAAAC+AGG | + | tig0043454:1092-1111 | Msa1463590:CDS | 40.0% | |
| TGACACAATGATGTCCTGTT+TGG | - | tig0043454:1109-1128 | Msa1463590:intergenic | 40.0% | |
| ATCATTACTAACAGCGAAGG+CGG | - | tig0043454:1304-1323 | Msa1463590:intergenic | 40.0% | |
| TGATTCAGGCTTAAAGAACC+AGG | - | tig0043454:1411-1430 | Msa1463590:intergenic | 40.0% | |
| GAGTCTTAGGACTTTGATTC+AGG | - | tig0043454:1425-1444 | Msa1463590:intergenic | 40.0% | |
| ! | TGCATTTTCAGTAGGACTGT+AGG | - | tig0043454:1451-1470 | Msa1463590:intergenic | 40.0% |
| AATTCTTCTCTGCTCTGATG+TGG | + | tig0043454:1470-1489 | Msa1463590:CDS | 40.0% | |
| TGAGTTGTACTGCATATCCA+AGG | + | tig0043454:1506-1525 | Msa1463590:CDS | 40.0% | |
| GTCCTTAATTGTGCTATCCT+TGG | - | tig0043454:1526-1545 | Msa1463590:intergenic | 40.0% | |
| CAAGAACCAAAGAAAGGTCT+TGG | + | tig0043454:1567-1586 | Msa1463590:CDS | 40.0% | |
| !!! | GTTGCTGCTTTTTTCAAGCA+CGG | - | tig0043454:1628-1647 | Msa1463590:intergenic | 40.0% |
| GAGACAATCCGTGTAAAAAG+CGG | + | tig0043454:1930-1949 | Msa1463590:CDS | 40.0% | |
| ATTATCCCACTGTCTCCATT+TGG | - | tig0043454:2017-2036 | Msa1463590:intergenic | 40.0% | |
| GATGGTATTTCCAACAACCT+TGG | - | tig0043454:2069-2088 | Msa1463590:intergenic | 40.0% | |
| TGGAAATACCATCTTCTGCT+TGG | + | tig0043454:2076-2095 | Msa1463590:CDS | 40.0% | |
| GGAAATACCATCTTCTGCTT+GGG | + | tig0043454:2077-2096 | Msa1463590:CDS | 40.0% | |
| !!! | TAGCTTTGTTTTTCCCATCC+CGG | - | tig0043454:2103-2122 | Msa1463590:intergenic | 40.0% |
| ACAACAGAAAGGATTTCCTG+AGG | + | tig0043454:2241-2260 | Msa1463590:CDS | 40.0% | |
| !! | AAAGATCACTGGTACCGATT+GGG | + | tig0043454:2365-2384 | Msa1463590:CDS | 40.0% |
| TAGTGGAGTATGCATATCAG+AGG | + | tig0043454:2420-2439 | Msa1463590:CDS | 40.0% | |
| TGATATAAGCAAGAGGCAAG+TGG | - | tig0043454:2616-2635 | Msa1463590:intergenic | 40.0% | |
| GATGCAGTGATATAAGCAAG+AGG | - | tig0043454:2623-2642 | Msa1463590:intergenic | 40.0% | |
| TATATCACTGCATCAACCCA+TGG | + | tig0043454:2629-2648 | Msa1463590:CDS | 40.0% | |
| ATATCACTGCATCAACCCAT+GGG | + | tig0043454:2630-2649 | Msa1463590:CDS | 40.0% | |
| !!! | TGCAATTTTGGATGATGGAG+AGG | + | tig0043454:2925-2944 | Msa1463590:CDS | 40.0% |
| !!! | AATTTTGGATGATGGAGAGG+CGG | + | tig0043454:2928-2947 | Msa1463590:CDS | 40.0% |
| CAAAAGCTTCTGTCAGTACA+CGG | + | tig0043454:3020-3039 | Msa1463590:CDS | 40.0% | |
| ! | TACACGGTCTTCAGTTTTTG+TGG | + | tig0043454:3036-3055 | Msa1463590:CDS | 40.0% |
| CTGCAATGAGATTACTGAAC+AGG | + | tig0043454:3146-3165 | Msa1463590:CDS | 40.0% | |
| TCTAGGAACATGGATCTCAA+GGG | - | tig0043454:3196-3215 | Msa1463590:intergenic | 40.0% | |
| ATCTAGGAACATGGATCTCA+AGG | - | tig0043454:3197-3216 | Msa1463590:intergenic | 40.0% | |
| !! | TTGTACCACTTGCTGTTGAA+AGG | + | tig0043454:3266-3285 | Msa1463590:CDS | 40.0% |
| !! | TGTACCACTTGCTGTTGAAA+GGG | + | tig0043454:3267-3286 | Msa1463590:CDS | 40.0% |
| ! | GACAATTTGTAAGGAAGTGC+CGG | - | tig0043454:3331-3350 | Msa1463590:intergenic | 40.0% |
| GGTTATAAGTCAACAACTGC+TGG | + | tig0043454:3376-3395 | Msa1463590:CDS | 40.0% | |
| CGACAATCAAAGGGATTGTA+TGG | - | tig0043454:3441-3460 | Msa1463590:intergenic | 40.0% | |
| CTTGACTCAACGACAATCAA+AGG | - | tig0043454:3451-3470 | Msa1463590:intergenic | 40.0% | |
| CTTTGATTGTCGTTGAGTCA+AGG | + | tig0043454:3449-3468 | Msa1463590:CDS | 40.0% | |
| GCTGAAAAGAAGGGAAATGA+AGG | + | tig0043454:3540-3559 | Msa1463590:CDS | 40.0% | |
| !! | TTGGTTTTCGATGCTAGGAT+TGG | - | tig0043454:3722-3741 | Msa1463590:intergenic | 40.0% |
| !! | TTAGCTTGGTTTTCGATGCT+AGG | - | tig0043454:3727-3746 | Msa1463590:intergenic | 40.0% |
| AAAACCAAGCTAAGACAGCA+AGG | + | tig0043454:3734-3753 | Msa1463590:CDS | 40.0% | |
| AAGGAATATGACTGATGCCA+CGG | + | tig0043454:3777-3796 | Msa1463590:CDS | 40.0% | |
| GAAATCATAGTTCAACTCCG+TGG | - | tig0043454:3797-3816 | Msa1463590:intergenic | 40.0% | |
| CGAAACCCATTTGTAATCTG+TGG | + | tig0043454:3817-3836 | Msa1463590:CDS | 40.0% | |
| TTGCCCCACAGATTACAAAT+GGG | - | tig0043454:3825-3844 | Msa1463590:intergenic | 40.0% | |
| TCCTTCTGTCCACGATAAAT+GGG | - | tig0043454:3856-3875 | Msa1463590:intergenic | 40.0% | |
| TGTGTGTGAACTTTCAGTTG+TGG | + | tig0043454:3936-3955 | Msa1463590:CDS | 40.0% | |
| GTGTGTGAACTTTCAGTTGT+GGG | + | tig0043454:3937-3956 | Msa1463590:CDS | 40.0% | |
| TGTGTGAACTTTCAGTTGTG+GGG | + | tig0043454:3938-3957 | Msa1463590:CDS | 40.0% | |
| ACCCCTTTGCTAAGTATAAG+AGG | + | tig0043454:4200-4219 | Msa1463590:three_prime_UTR | 40.0% | |
| TGCTAAGTATAAGAGGAAGG+GGG | + | tig0043454:4207-4226 | Msa1463590:three_prime_UTR | 40.0% | |
| AACACGAACAGTCTGATCCA+GGG | - | tig0043454:139-158 | Msa1463590:intergenic | 45.0% | |
| AAACACGAACAGTCTGATCC+AGG | - | tig0043454:140-159 | Msa1463590:intergenic | 45.0% | |
| TGGATCAGACTGTTCGTGTT+TGG | + | tig0043454:139-158 | Msa1463590:CDS | 45.0% | |
| GGATCAGACTGTTCGTGTTT+GGG | + | tig0043454:140-159 | Msa1463590:CDS | 45.0% | |
| ATGTGTTGGAAGGTCATGAC+CGG | + | tig0043454:268-287 | Msa1463590:CDS | 45.0% | |
| GAGACAATAAGAGGCAGTGT+AGG | - | tig0043454:318-337 | Msa1463590:intergenic | 45.0% | |
| ACACTGCCTCTTATTGTCTC+AGG | + | tig0043454:318-337 | Msa1463590:CDS | 45.0% | |
| TCAGCTCCTGAGACAATAAG+AGG | - | tig0043454:327-346 | Msa1463590:intergenic | 45.0% | |
| ACCGTCAAGTGAAACTTTGG+AGG | + | tig0043454:349-368 | Msa1463590:CDS | 45.0% | |
| GGTCTTACATATAAGGACGG+AGG | + | tig0043454:925-944 | Msa1463590:intron | 45.0% | |
| TGGGAAGTGGATACTTTGAG+AGG | + | tig0043454:1048-1067 | Msa1463590:CDS | 45.0% | |
| ! | GGGAAGTGGATACTTTGAGA+GGG | + | tig0043454:1049-1068 | Msa1463590:CDS | 45.0% |
| CAATGATGTCCTGTTTGGCA+TGG | - | tig0043454:1104-1123 | Msa1463590:intergenic | 45.0% | |
| GAGTATGGGATGCAACAAAG+AGG | + | tig0043454:1151-1170 | Msa1463590:CDS | 45.0% | |
| TGGTATTCAAACCTTCCGCA+GGG | + | tig0043454:1176-1195 | Msa1463590:CDS | 45.0% | |
| AAAATCGGTCATGTTCCCTG+CGG | - | tig0043454:1194-1213 | Msa1463590:intergenic | 45.0% | |
| GCTGCCAACAGATTCATTTC+AGG | - | tig0043454:1234-1253 | Msa1463590:intergenic | 45.0% | |
| GAAATGAATCTGTTGGCAGC+TGG | + | tig0043454:1234-1253 | Msa1463590:CDS | 45.0% | |
| TGGCATGATAGTCTTCAAGC+TGG | + | tig0043454:1266-1285 | Msa1463590:CDS | 45.0% | |
| TCTTCAAGCTGGAGAGAGAA+AGG | + | tig0043454:1277-1296 | Msa1463590:CDS | 45.0% | |
| TCATTACTAACAGCGAAGGC+GGG | - | tig0043454:1303-1322 | Msa1463590:intergenic | 45.0% | |
| GAAACGCAAAAAGCGGTCTT+TGG | - | tig0043454:1340-1359 | Msa1463590:intergenic | 45.0% | |
| GGACTGTAGGAAAGAGTCTT+AGG | - | tig0043454:1438-1457 | Msa1463590:intergenic | 45.0% | |
| GAACCAAAGAAAGGTCTTGG+AGG | + | tig0043454:1570-1589 | Msa1463590:CDS | 45.0% | |
| GATCCTCCAAGACCTTTCTT+TGG | - | tig0043454:1576-1595 | Msa1463590:intergenic | 45.0% | |
| ! | GAACAGGAAACTTGCTCTGT+AGG | + | tig0043454:1730-1749 | Msa1463590:CDS | 45.0% |
| ! | AAACTTGCTCTGTAGGTCTG+AGG | + | tig0043454:1737-1756 | Msa1463590:CDS | 45.0% |
| CTTCAGCAGAGGATTGTTCT+TGG | + | tig0043454:1780-1799 | Msa1463590:CDS | 45.0% | |
| TGTCATTGCTAGCAAGAAGC+TGG | + | tig0043454:1887-1906 | Msa1463590:CDS | 45.0% | |
| ! | TACACGGATTGTCTCATGGA+GGG | - | tig0043454:1925-1944 | Msa1463590:intergenic | 45.0% |
| ! | TTACACGGATTGTCTCATGG+AGG | - | tig0043454:1926-1945 | Msa1463590:intergenic | 45.0% |
| CGTCCCAATCTATATCACCA+AGG | + | tig0043454:2049-2068 | Msa1463590:CDS | 45.0% | |
| !! | GAAAGATCACTGGTACCGAT+TGG | + | tig0043454:2364-2383 | Msa1463590:CDS | 45.0% |
| GAAGAGCTTCAACTCCCAAT+CGG | - | tig0043454:2382-2401 | Msa1463590:intergenic | 45.0% | |
| ACAAGGCAATGCTGGTATAG+TGG | + | tig0043454:2403-2422 | Msa1463590:CDS | 45.0% | |
| ! | TCGAGAGCGTGTTAAGATCT+TGG | + | tig0043454:2580-2599 | Msa1463590:CDS | 45.0% |
| !! | GATGGAGGTATCAAGAGAGA+TGG | - | tig0043454:2728-2747 | Msa1463590:intergenic | 45.0% |
| CAATCACCACAACACAGTAC+AGG | - | tig0043454:2752-2771 | Msa1463590:intergenic | 45.0% | |
| CTGTACTGTGTTGTGGTGAT+TGG | + | tig0043454:2750-2769 | Msa1463590:CDS | 45.0% | |
| GTCATGCGAGGCATATTTGA+TGG | + | tig0043454:2785-2804 | Msa1463590:CDS | 45.0% | |
| ATGCGAGGCATATTTGATGG+TGG | + | tig0043454:2788-2807 | Msa1463590:CDS | 45.0% | |
| ! | TGCGAGGCATATTTGATGGT+GGG | + | tig0043454:2789-2808 | Msa1463590:CDS | 45.0% |
| !! | GAGTTTGATGATGCTCCTGA+AGG | + | tig0043454:2845-2864 | Msa1463590:CDS | 45.0% |
| ATGATGCTCCTGAAGGTGAT+TGG | + | tig0043454:2852-2871 | Msa1463590:CDS | 45.0% | |
| TGATGCTCCTGAAGGTGATT+GGG | + | tig0043454:2853-2872 | Msa1463590:CDS | 45.0% | |
| !! | GGTGATTGGGTTGAGGATAT+CGG | + | tig0043454:2866-2885 | Msa1463590:CDS | 45.0% |
| !! | GATATCGGCTTGGATGTTGA+TGG | + | tig0043454:2881-2900 | Msa1463590:CDS | 45.0% |
| GCTGAAGAAGGTGATGAAGA+GGG | + | tig0043454:2950-2969 | Msa1463590:CDS | 45.0% | |
| !!! | TTTTGGAGTGTCTGCTTCAG+GGG | - | tig0043454:3005-3024 | Msa1463590:intergenic | 45.0% |
| !!! | CTTTTGGAGTGTCTGCTTCA+GGG | - | tig0043454:3006-3025 | Msa1463590:intergenic | 45.0% |
| !! | CGTGTACTGACAGAAGCTTT+TGG | - | tig0043454:3022-3041 | Msa1463590:intergenic | 45.0% |
| AGATTACTGAACAGGCAGCT+TGG | + | tig0043454:3154-3173 | Msa1463590:CDS | 45.0% | |
| GATTACTGAACAGGCAGCTT+GGG | + | tig0043454:3155-3174 | Msa1463590:CDS | 45.0% | |
| TAGGAACATGGATCTCAAGG+GGG | - | tig0043454:3194-3213 | Msa1463590:intergenic | 45.0% | |
| CTAGGAACATGGATCTCAAG+GGG | - | tig0043454:3195-3214 | Msa1463590:intergenic | 45.0% | |
| GACTGGCAGAATGAAGATCT+AGG | - | tig0043454:3213-3232 | Msa1463590:intergenic | 45.0% | |
| TACAACTGGAGCGGATGAAA+AGG | - | tig0043454:3251-3270 | Msa1463590:intergenic | 45.0% | |
| TCAACAGCAAGTGGTACAAC+TGG | - | tig0043454:3265-3284 | Msa1463590:intergenic | 45.0% | |
| !! | GTACCACTTGCTGTTGAAAG+GGG | + | tig0043454:3268-3287 | Msa1463590:CDS | 45.0% |
| TCGTCTAGTCCAAATGTGAG+AGG | + | tig0043454:3301-3320 | Msa1463590:CDS | 45.0% | |
| !! | ATTTGTAAGGAAGTGCCGGT+GGG | - | tig0043454:3327-3346 | Msa1463590:intergenic | 45.0% |
| !! | AATTTGTAAGGAAGTGCCGG+TGG | - | tig0043454:3328-3347 | Msa1463590:intergenic | 45.0% |
| AACTGCTGGGAAATTCACTG+AGG | + | tig0043454:3390-3409 | Msa1463590:CDS | 45.0% | |
| GGAAATTCACTGAGGCTCTT+CGG | + | tig0043454:3398-3417 | Msa1463590:CDS | 45.0% | |
| TGATTGTCGTTGAGTCAAGG+AGG | + | tig0043454:3452-3471 | Msa1463590:CDS | 45.0% | |
| GATTGTCGTTGAGTCAAGGA+GGG | + | tig0043454:3453-3472 | Msa1463590:CDS | 45.0% | |
| GAGGGAAGTGGATGATGTAA+AGG | + | tig0043454:3471-3490 | Msa1463590:CDS | 45.0% | |
| TGCAGATGGAGCTGAAAAGA+AGG | + | tig0043454:3530-3549 | Msa1463590:CDS | 45.0% | |
| GCAGATGGAGCTGAAAAGAA+GGG | + | tig0043454:3531-3550 | Msa1463590:CDS | 45.0% | |
| AGGTGTCTGAAGATTGCAGT+GGG | - | tig0043454:3605-3624 | Msa1463590:intergenic | 45.0% | |
| ATCTTCAGACACCTCACTTG+AGG | + | tig0043454:3611-3630 | Msa1463590:CDS | 45.0% | |
| ! | AACAAAGCTAGCCTCAAGTG+AGG | - | tig0043454:3625-3644 | Msa1463590:intergenic | 45.0% |
| GTTGCCCCACAGATTACAAA+TGG | - | tig0043454:3826-3845 | Msa1463590:intergenic | 45.0% | |
| ACCTATGTGCCCATTTATCG+TGG | + | tig0043454:3844-3863 | Msa1463590:CDS | 45.0% | |
| TCCACGATAAATGGGCACAT+AGG | - | tig0043454:3848-3867 | Msa1463590:intergenic | 45.0% | |
| GTCCTTCTGTCCACGATAAA+TGG | - | tig0043454:3857-3876 | Msa1463590:intergenic | 45.0% | |
| GTGTGAACTTTCAGTTGTGG+GGG | + | tig0043454:3939-3958 | Msa1463590:CDS | 45.0% | |
| ! | ACAGAGCAATCCAGAAGCAT+CGG | - | tig0043454:3965-3984 | Msa1463590:intergenic | 45.0% |
| TTCAATCAACGAATCTGGGC+AGG | - | tig0043454:3991-4010 | Msa1463590:intergenic | 45.0% | |
| !!! | CTATGCATTTTGAAGTCCCC+TGG | + | tig0043454:4478-4497 | Msa1463590:three_prime_UTR | 45.0% |
| AGGATCCAAGTCCGACAATT+GGG | - | tig0043454:4506-4525 | Msa1463590:intergenic | 45.0% | |
| AAGGATCCAAGTCCGACAAT+TGG | - | tig0043454:4507-4526 | Msa1463590:intergenic | 45.0% | |
| CTTATACCTCCTCTTCAAGC+TGG | + | tig0043454:4531-4550 | Msa1463590:three_prime_UTR | 45.0% | |
| !! | ATAAAAAAAAATTAAAAAGA+CGG | - | tig0043454:493-512 | Msa1463590:intergenic | 5.0% |
| CTGCCAATTCCAGATGCGAA+TGG | - | tig0043454:25-44 | Msa1463590:intergenic | 50.0% | |
| GGTTCTCTCAAAAGGAAGGC+TGG | + | tig0043454:168-187 | Msa1463590:CDS | 50.0% | |
| TGTGTTGGAAGGTCATGACC+GGG | + | tig0043454:269-288 | Msa1463590:CDS | 50.0% | |
| GGGTCTTACATACAGAGACG+GGG | - | tig0043454:695-714 | Msa1463590:intergenic | 50.0% | |
| GGGGTCTTACATACAGAGAC+GGG | - | tig0043454:696-715 | Msa1463590:intergenic | 50.0% | |
| GGGGGTCTTACATACAGAGA+CGG | - | tig0043454:697-716 | Msa1463590:intergenic | 50.0% | |
| AGACACTAAGGCATGGGAAG+TGG | + | tig0043454:1035-1054 | Msa1463590:intron | 50.0% | |
| TGGGATGCAACAAAGAGGAC+TGG | + | tig0043454:1156-1175 | Msa1463590:CDS | 50.0% | |
| CTGGTATTCAAACCTTCCGC+AGG | + | tig0043454:1175-1194 | Msa1463590:CDS | 50.0% | |
| !! | GCAGGGAACATGACCGATTT+TGG | + | tig0043454:1193-1212 | Msa1463590:CDS | 50.0% |
| TTGGCAGCTGGTCATGATAG+TGG | + | tig0043454:1246-1265 | Msa1463590:CDS | 50.0% | |
| GTACTTACTATTCGGCGACC+TGG | + | tig0043454:1390-1409 | Msa1463590:CDS | 50.0% | |
| CTTCTCTGCTCTGATGTGGA+CGG | + | tig0043454:1474-1493 | Msa1463590:CDS | 50.0% | |
| TGGAGGATCAGCAGTCTTTG+TGG | + | tig0043454:1587-1606 | Msa1463590:CDS | 50.0% | |
| GATCAGCAGTCTTTGTGGCT+CGG | + | tig0043454:1592-1611 | Msa1463590:CDS | 50.0% | |
| ! | CAGTCTTTGTGGCTCGGAAT+AGG | + | tig0043454:1598-1617 | Msa1463590:CDS | 50.0% |
| TGCTCTGTAGGTCTGAGGAT+AGG | + | tig0043454:1742-1761 | Msa1463590:CDS | 50.0% | |
| GCTCTGTAGGTCTGAGGATA+GGG | + | tig0043454:1743-1762 | Msa1463590:CDS | 50.0% | |
| TGCCTTCCAAATGGAGACAG+TGG | + | tig0043454:2008-2027 | Msa1463590:CDS | 50.0% | |
| GCCTTCCAAATGGAGACAGT+GGG | + | tig0043454:2009-2028 | Msa1463590:CDS | 50.0% | |
| TCCCACTGTCTCCATTTGGA+AGG | - | tig0043454:2013-2032 | Msa1463590:intergenic | 50.0% | |
| ATACCATCTTCTGCTTGGGC+CGG | + | tig0043454:2081-2100 | Msa1463590:CDS | 50.0% | |
| ACGAAATGGAGAGCAACCTC+AGG | - | tig0043454:2260-2279 | Msa1463590:intergenic | 50.0% | |
| GGAGTTGAAGCTCTTCGACA+AGG | + | tig0043454:2386-2405 | Msa1463590:CDS | 50.0% | |
| AGCAACGTCATGTAGCCCAT+GGG | - | tig0043454:2648-2667 | Msa1463590:intergenic | 50.0% | |
| GGCTACATGACGTTGCTGAA+AGG | + | tig0043454:2651-2670 | Msa1463590:CDS | 50.0% | |
| TGAAAGGCTTGCAGCTGAAC+TGG | + | tig0043454:2667-2686 | Msa1463590:CDS | 50.0% | |
| GAAAGGCTTGCAGCTGAACT+GGG | + | tig0043454:2668-2687 | Msa1463590:CDS | 50.0% | |
| AAAGGCTTGCAGCTGAACTG+GGG | + | tig0043454:2669-2688 | Msa1463590:CDS | 50.0% | |
| AACGTTCCATCTTTGCCCGA+GGG | + | tig0043454:2695-2714 | Msa1463590:CDS | 50.0% | |
| AGAGATGGTACTTTCCCCTC+GGG | - | tig0043454:2713-2732 | Msa1463590:intergenic | 50.0% | |
| GAGAGATGGTACTTTCCCCT+CGG | - | tig0043454:2714-2733 | Msa1463590:intergenic | 50.0% | |
| ! | CAACACAGTACAGGTGATGG+AGG | - | tig0043454:2743-2762 | Msa1463590:intergenic | 50.0% |
| CCACAACACAGTACAGGTGA+TGG | - | tig0043454:2746-2765 | Msa1463590:intergenic | 50.0% | |
| CCATCACCTGTACTGTGTTG+TGG | + | tig0043454:2743-2762 | Msa1463590:CDS | 50.0% | |
| ATATGCCTCGCATGACCCTA+AGG | - | tig0043454:2781-2800 | Msa1463590:intergenic | 50.0% | |
| ! | TCCTGAAGGTGATTGGGTTG+AGG | + | tig0043454:2859-2878 | Msa1463590:CDS | 50.0% |
| TCCTCAACCCAATCACCTTC+AGG | - | tig0043454:2863-2882 | Msa1463590:intergenic | 50.0% | |
| !! | TTGGGTTGAGGATATCGGCT+TGG | + | tig0043454:2871-2890 | Msa1463590:CDS | 50.0% |
| ! | CGGCTTGGATGTTGATGGAT+TGG | + | tig0043454:2886-2905 | Msa1463590:CDS | 50.0% |
| GGCTGAAGAAGGTGATGAAG+AGG | + | tig0043454:2949-2968 | Msa1463590:CDS | 50.0% | |
| GAAGAAGGTGATGAAGAGGG+TGG | + | tig0043454:2953-2972 | Msa1463590:CDS | 50.0% | |
| AAGGTGATGAAGAGGGTGGA+TGG | + | tig0043454:2957-2976 | Msa1463590:CDS | 50.0% | |
| AGGTGATGAAGAGGGTGGAT+GGG | + | tig0043454:2958-2977 | Msa1463590:CDS | 50.0% | |
| ! | TTTGGAGTGTCTGCTTCAGG+GGG | - | tig0043454:3004-3023 | Msa1463590:intergenic | 50.0% |
| !!! | GCTTTTGGAGTGTCTGCTTC+AGG | - | tig0043454:3007-3026 | Msa1463590:intergenic | 50.0% |
| ! | TTTTTGTGGCCCCAACACCT+GGG | + | tig0043454:3050-3069 | Msa1463590:CDS | 50.0% |
| TAACTGCCATCCCAGGTGTT+GGG | - | tig0043454:3063-3082 | Msa1463590:intergenic | 50.0% | |
| GGATGGCAGTTAGCCAGATA+TGG | + | tig0043454:3071-3090 | Msa1463590:CDS | 50.0% | |
| AGCAAGTGGTACAACTGGAG+CGG | - | tig0043454:3260-3279 | Msa1463590:intergenic | 50.0% | |
| CAACCCCTTTCAACAGCAAG+TGG | - | tig0043454:3274-3293 | Msa1463590:intergenic | 50.0% | |
| !! | CACTTGCTGTTGAAAGGGGT+TGG | + | tig0043454:3272-3291 | Msa1463590:CDS | 50.0% |
| !! | GTATGTTCTGGCTCTGCAGA+TGG | + | tig0043454:3516-3535 | Msa1463590:CDS | 50.0% |
| AATATGCTGCGAGTTCCTGC+TGG | - | tig0043454:3579-3598 | Msa1463590:intergenic | 50.0% | |
| ! | GAGGTGTCTGAAGATTGCAG+TGG | - | tig0043454:3606-3625 | Msa1463590:intergenic | 50.0% |
| ! | ATTGGTCTCGAGTAGTCTCC+TGG | - | tig0043454:3704-3723 | Msa1463590:intergenic | 50.0% |
| ! | CTTGCCTTGCTGTCTTAGCT+TGG | - | tig0043454:3741-3760 | Msa1463590:intergenic | 50.0% |
| TAAGACAGCAAGGCAAGTGC+TGG | + | tig0043454:3744-3763 | Msa1463590:CDS | 50.0% | |
| GCCCATTTATCGTGGACAGA+AGG | + | tig0043454:3852-3871 | Msa1463590:CDS | 50.0% | |
| ! | TTCCCGTTTTGTACCAACCC+AGG | + | tig0043454:3897-3916 | Msa1463590:CDS | 50.0% |
| !! | CTCCTGGGTTGGTACAAAAC+GGG | - | tig0043454:3902-3921 | Msa1463590:intergenic | 50.0% |
| !! | CCTCCTGGGTTGGTACAAAA+CGG | - | tig0043454:3903-3922 | Msa1463590:intergenic | 50.0% |
| ! | CGTTTTGTACCAACCCAGGA+GGG | + | tig0043454:3901-3920 | Msa1463590:CDS | 50.0% |
| ! | GTTTTGTACCAACCCAGGAG+GGG | + | tig0043454:3902-3921 | Msa1463590:CDS | 50.0% |
| AGTCCGACAATTGGGAACCA+GGG | - | tig0043454:4498-4517 | Msa1463590:intergenic | 50.0% | |
| AAGTCCGACAATTGGGAACC+AGG | - | tig0043454:4499-4518 | Msa1463590:intergenic | 50.0% | |
| TGGTTCCCAATTGTCGGACT+TGG | + | tig0043454:4498-4517 | Msa1463590:three_prime_UTR | 50.0% | |
| TAAGCACCAGCTTGAAGAGG+AGG | - | tig0043454:4540-4559 | Msa1463590:intergenic | 50.0% | |
| AGCTAAGCACCAGCTTGAAG+AGG | - | tig0043454:4543-4562 | Msa1463590:intergenic | 50.0% | |
| TATTGTCGTGTCAGCCTCCC+TGG | + | tig0043454:119-138 | Msa1463590:CDS | 55.0% | |
| ACGAACAGTCTGATCCAGGG+AGG | - | tig0043454:136-155 | Msa1463590:intergenic | 55.0% | |
| GTGTTGGAAGGTCATGACCG+GGG | + | tig0043454:270-289 | Msa1463590:CDS | 55.0% | |
| ! | TCATGACCGGGGTGTCAACT+GGG | + | tig0043454:281-300 | Msa1463590:CDS | 55.0% |
| TCCGTGTAAAAAGCGGAGCC+TGG | + | tig0043454:1937-1956 | Msa1463590:CDS | 55.0% | |
| !!! | CCCAGGCTCCGCTTTTTACA+CGG | - | tig0043454:1941-1960 | Msa1463590:intergenic | 55.0% |
| CCGTGTAAAAAGCGGAGCCT+GGG | + | tig0043454:1938-1957 | Msa1463590:CDS | 55.0% | |
| TACCATCTTCTGCTTGGGCC+GGG | + | tig0043454:2082-2101 | Msa1463590:CDS | 55.0% | |
| GCTCTTCGACAAGGCAATGC+TGG | + | tig0043454:2395-2414 | Msa1463590:CDS | 55.0% | |
| CAGCAACGTCATGTAGCCCA+TGG | - | tig0043454:2649-2668 | Msa1463590:intergenic | 55.0% | |
| AAGGCTTGCAGCTGAACTGG+GGG | + | tig0043454:2670-2689 | Msa1463590:CDS | 55.0% | |
| CAACGTTCCATCTTTGCCCG+AGG | + | tig0043454:2694-2713 | Msa1463590:CDS | 55.0% | |
| ACGTTCCATCTTTGCCCGAG+GGG | + | tig0043454:2696-2715 | Msa1463590:CDS | 55.0% | |
| ACTTTCCCCTCGGGCAAAGA+TGG | - | tig0043454:2704-2723 | Msa1463590:intergenic | 55.0% | |
| ! | TGGTGATTGGCCGCTCCTTA+GGG | + | tig0043454:2763-2782 | Msa1463590:CDS | 55.0% |
| ! | TTGGAGTGTCTGCTTCAGGG+GGG | - | tig0043454:3003-3022 | Msa1463590:intergenic | 55.0% |
| ! | GTTTTTGTGGCCCCAACACC+TGG | + | tig0043454:3049-3068 | Msa1463590:CDS | 55.0% |
| ! | AACTGCCATCCCAGGTGTTG+GGG | - | tig0043454:3062-3081 | Msa1463590:intergenic | 55.0% |
| CTAACTGCCATCCCAGGTGT+TGG | - | tig0043454:3064-3083 | Msa1463590:intergenic | 55.0% | |
| ATCTGGCTAACTGCCATCCC+AGG | - | tig0043454:3070-3089 | Msa1463590:intergenic | 55.0% | |
| TCCAAATGTGAGAGGCCCAC+CGG | + | tig0043454:3309-3328 | Msa1463590:CDS | 55.0% | |
| CGTTGAGTCAAGGAGGGAAG+TGG | + | tig0043454:3459-3478 | Msa1463590:CDS | 55.0% | |
| GCAAAGAACCTTGCCACAGC+TGG | + | tig0043454:3670-3689 | Msa1463590:CDS | 55.0% | |
| CGAAGTTACCAGCTGTGGCA+AGG | - | tig0043454:3681-3700 | Msa1463590:intergenic | 55.0% | |
| !! | AAGTGCTGGCTGCTGCAGAA+AGG | + | tig0043454:3758-3777 | Msa1463590:CDS | 55.0% |
| ! | CCGTTTTGTACCAACCCAGG+AGG | + | tig0043454:3900-3919 | Msa1463590:CDS | 55.0% |
| GTCCCCTGGTTCCCAATTGT+CGG | + | tig0043454:4492-4511 | Msa1463590:three_prime_UTR | 55.0% | |
| GTCCGACAATTGGGAACCAG+GGG | - | tig0043454:4497-4516 | Msa1463590:intergenic | 55.0% | |
| ! | GTCATGACCGGGGTGTCAAC+TGG | + | tig0043454:280-299 | Msa1463590:CDS | 60.0% |
| AAGCAGCCCAGTTGACACCC+CGG | - | tig0043454:290-309 | Msa1463590:intergenic | 60.0% | |
| TCGGTCATGTTCCCTGCGGA+AGG | - | tig0043454:1190-1209 | Msa1463590:intergenic | 60.0% | |
| CTCTGCTCTGATGTGGACGG+TGG | + | tig0043454:1477-1496 | Msa1463590:CDS | 60.0% | |
| AGCGGAGCCTGGGATGACAA+TGG | + | tig0043454:1948-1967 | Msa1463590:CDS | 60.0% | |
| ATCCCGGCCCAAGCAGAAGA+TGG | - | tig0043454:2087-2106 | Msa1463590:intergenic | 60.0% | |
| ATCTTCTGCTTGGGCCGGGA+TGG | + | tig0043454:2086-2105 | Msa1463590:CDS | 60.0% | |
| TCTTCTGCTTGGGCCGGGAT+GGG | + | tig0043454:2087-2106 | Msa1463590:CDS | 60.0% | |
| ! | GTGGTGATTGGCCGCTCCTT+AGG | + | tig0043454:2762-2781 | Msa1463590:CDS | 60.0% |
| CCTCGCATGACCCTAAGGAG+CGG | - | tig0043454:2776-2795 | Msa1463590:intergenic | 60.0% | |
| GATGGAGAGGCGGCTGAAGA+AGG | + | tig0043454:2938-2957 | Msa1463590:CDS | 60.0% | |
| TGAAGAGGGTGGATGGGAGC+TGG | + | tig0043454:2964-2983 | Msa1463590:CDS | 60.0% | |
| GCTGCTGATCATGCAGCTGC+TGG | + | tig0043454:3112-3131 | Msa1463590:CDS | 60.0% | |
| GGCGCGAAGATACGAGTGAC+TGG | - | tig0043454:3230-3249 | Msa1463590:intergenic | 60.0% | |
| CCTGGCGAAGTTACCAGCTG+TGG | - | tig0043454:3686-3705 | Msa1463590:intergenic | 60.0% | |
| CCACAGCTGGTAACTTCGCC+AGG | + | tig0043454:3683-3702 | Msa1463590:CDS | 60.0% | |
| AGTGCATAGCTGCCCCTCCT+GGG | - | tig0043454:3917-3936 | Msa1463590:intergenic | 60.0% | |
| CCGCTCCTTAGGGTCATGCG+AGG | + | tig0043454:2773-2792 | Msa1463590:CDS | 65.0% | |
| TGTGGCCCCAACACCTGGGA+TGG | + | tig0043454:3054-3073 | Msa1463590:CDS | 65.0% | |
| GCCGGTGGGCCTCTCACATT+TGG | - | tig0043454:3313-3332 | Msa1463590:intergenic | 65.0% | |
| GGACAATCCAGCACGCCAGC+AGG | + | tig0043454:3561-3580 | Msa1463590:CDS | 65.0% | |
| CATAGCTGCCCCTCCTGGGT+TGG | - | tig0043454:3913-3932 | Msa1463590:intergenic | 65.0% | |
| CAGTGCATAGCTGCCCCTCC+TGG | - | tig0043454:3918-3937 | Msa1463590:intergenic | 65.0% | |
| GTTGTGGGGGCCGATGCTTC+TGG | + | tig0043454:3952-3971 | Msa1463590:CDS | 65.0% | |
| GCGAGTTCCTGCTGGCGTGC+TGG | - | tig0043454:3571-3590 | Msa1463590:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0043454 | gene | 1 | 4721 | 1 | ID=Msa1463590;Name=Msa1463590 |
| tig0043454 | mRNA | 1 | 4721 | 1 | ID=Msa1463590-mRNA-1;Parent=Msa1463590;Name=Msa1463590-mRNA-1;_AED=0.00;_eAED=0.00;_QI=89|1|1|1|1|1|2|716|1085 |
| tig0043454 | exon | 1 | 378 | 1 | ID=Msa1463590-mRNA-1:exon:24128;Parent=Msa1463590-mRNA-1 |
| tig0043454 | exon | 1037 | 4721 | 1037 | ID=Msa1463590-mRNA-1:exon:24129;Parent=Msa1463590-mRNA-1 |
| tig0043454 | five_prime_UTR | 1 | 89 | 1 | ID=Msa1463590-mRNA-1:five_prime_utr;Parent=Msa1463590-mRNA-1 |
| tig0043454 | CDS | 90 | 378 | 90 | ID=Msa1463590-mRNA-1:cds;Parent=Msa1463590-mRNA-1 |
| tig0043454 | CDS | 1037 | 4005 | 1037 | ID=Msa1463590-mRNA-1:cds;Parent=Msa1463590-mRNA-1 |
| tig0043454 | three_prime_UTR | 4006 | 4721 | 4006 | ID=Msa1463590-mRNA-1:three_prime_utr;Parent=Msa1463590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
