AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0049960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0049960 MtrunA17_Chr8g0370511 68.172 487 154 1 33 519 524 1009 0.0 684
Msa0049960 MtrunA17_Chr8g0338881 69.505 505 151 3 27 529 547 1050 0.0 677
Msa0049960 MtrunA17_Chr8g0339021 65.116 516 175 2 9 520 486 1000 0.0 676
Msa0049960 MtrunA17_Chr5g0420331 68.238 488 154 1 33 520 525 1011 0.0 673
Msa0049960 MtrunA17_Chr5g0420341 67.828 488 156 1 33 520 525 1011 0.0 671
Msa0049960 MtrunA17_Chr2g0296451 68.507 489 150 3 35 520 42 529 0.0 664
Msa0049960 MtrunA17_Chr8g0338901 64.898 490 168 3 35 522 547 1034 0.0 647
Msa0049960 MtrunA17_Chr8g0339031 67.617 491 151 3 35 523 536 1020 0.0 644
Msa0049960 MtrunA17_Chr3g0085731 65.784 491 157 3 35 523 540 1021 0.0 627
Msa0049960 MtrunA17_Chr8g0338841 64.076 476 149 2 47 522 3 456 0.0 624
Msa0049960 MtrunA17_Chr8g0338981 63.673 490 174 3 35 522 524 1011 0.0 618
Msa0049960 MtrunA17_Chr8g0339011 64.490 490 170 3 35 522 520 1007 0.0 616
Msa0049960 MtrunA17_Chr7g0223531 65.392 497 165 2 33 523 534 1029 0.0 607
Msa0049960 MtrunA17_Chr5g0414761 64.040 495 171 4 30 522 309 798 0.0 607
Msa0049960 MtrunA17_Chr5g0430541 59.635 493 174 6 35 522 50 522 0.0 570
Msa0049960 MtrunA17_Chr8g0352221 55.725 524 144 6 9 523 486 930 1.65e-169 508
Msa0049960 MtrunA17_Chr7g0257531 51.503 499 232 7 30 525 182 673 9.95e-164 481
Msa0049960 MtrunA17_Chr4g0005591 49.901 505 232 5 35 520 594 1096 5.09e-158 479
Msa0049960 MtrunA17_Chr6g0455131 48.303 501 237 3 30 511 607 1104 5.94e-152 464
Msa0049960 MtrunA17_Chr4g0005871 47.695 499 225 5 35 511 651 1135 1.28e-151 464
Msa0049960 MtrunA17_Chr4g0005851 47.368 513 244 5 35 527 555 1061 3.91e-151 461
Msa0049960 MtrunA17_Chr4g0005891 47.683 518 248 5 28 526 561 1074 1.34e-150 459
Msa0049960 MtrunA17_Chr6g0454961 46.139 531 255 6 25 527 536 1063 1.04e-148 455
Msa0049960 MtrunA17_Chr6g0454951 48.708 503 240 6 30 520 609 1105 1.07e-148 455
Msa0049960 MtrunA17_Chr6g0455211 46.735 490 255 4 33 520 568 1053 2.92e-148 452
Msa0049960 MtrunA17_Chr6g0454971 49.177 486 233 6 33 511 564 1042 3.95e-147 450
Msa0049960 MtrunA17_Chr6g0455191 49.105 503 229 7 30 511 831 1327 4.04e-147 456
Msa0049960 MtrunA17_Chr6g0454851 45.709 501 258 4 30 520 615 1111 1.15e-144 444
Msa0049960 MtrunA17_Chr6g0455551 43.327 517 269 3 32 527 598 1111 1.99e-141 436
Msa0049960 MtrunA17_Chr6g0454831 46.899 516 248 7 33 526 523 1034 2.29e-141 434
Msa0049960 MtrunA17_Chr4g0009141 47.732 507 228 8 34 520 1042 1531 2.30e-139 441
Msa0049960 MtrunA17_Chr4g0009361 46.414 502 228 7 34 511 34 518 4.19e-138 415
Msa0049960 MtrunA17_Chr4g0009101 46.602 515 236 5 33 527 1059 1554 6.13e-138 437
Msa0049960 MtrunA17_Chr6g0454821 45.665 519 248 7 30 527 563 1068 1.13e-136 424
Msa0049960 MtrunA17_Chr4g0009041 46.289 512 234 6 31 520 1027 1519 6.13e-136 431
Msa0049960 MtrunA17_Chr7g0234901 43.561 528 268 10 24 526 28 550 6.47e-135 404
Msa0049960 MtrunA17_Chr8g0352211 49.692 487 162 8 35 521 538 941 5.48e-133 425
Msa0049960 MtrunA17_Chr7g0255681 45.547 494 244 7 39 511 1538 2027 7.03e-133 426
Msa0049960 MtrunA17_Chr4g0009241 46.626 489 239 5 34 520 1067 1535 1.29e-131 419
Msa0049960 MtrunA17_Chr4g0009171 45.681 521 236 9 31 527 1246 1743 8.97e-129 413
Msa0049960 MtrunA17_Chr4g0009171 54.148 229 101 3 34 262 522 746 9.50e-70 243
Msa0049960 MtrunA17_Chr4g0010711 44.752 505 257 9 38 527 1039 1536 1.24e-128 410
Msa0049960 MtrunA17_Chr4g0009301 44.854 515 245 8 34 527 1062 1558 2.89e-128 410
Msa0049960 MtrunA17_Chr4g0009401 46.000 500 232 4 34 511 1021 1504 5.43e-127 406
Msa0049960 MtrunA17_Chr6g0455031 44.355 496 248 11 35 511 545 1031 1.02e-117 372
Msa0049960 MtrunA17_Chr3g0114381 66.932 251 80 2 273 523 1 248 2.21e-116 345
Msa0049960 MtrunA17_Chr6g0455251 49.354 387 183 5 128 511 748 1124 8.40e-109 350
Msa0049960 MtrunA17_Chr6g0455251 48.971 243 114 2 9 243 506 746 8.79e-65 228
Msa0049960 MtrunA17_Chr4g0014831 56.856 299 124 3 33 329 309 604 2.10e-103 323
Msa0049960 MtrunA17_Chr6g0455221 51.935 310 140 3 33 336 529 835 7.52e-94 310
Msa0049960 MtrunA17_Chr6g0455221 33.333 243 142 2 307 530 893 1134 4.07e-36 144
Msa0049960 MtrunA17_Chr6g0455181 47.006 334 161 7 121 452 4 323 6.40e-92 285
Msa0049960 MtrunA17_Chr3g0085531 61.395 215 79 2 309 523 1 211 4.32e-82 259
Msa0049960 MtrunA17_Chr6g0454871 54.800 250 107 4 123 370 7 252 1.37e-78 247
Msa0049960 MtrunA17_Chr8g0338931 79.562 137 28 0 386 522 14 150 9.90e-75 238
Msa0049960 MtrunA17_Chr3g0085541 61.538 182 64 2 35 210 539 720 1.61e-64 223
Msa0049960 MtrunA17_Chr8g0343791 63.905 169 59 2 222 390 2 168 3.60e-64 206
Msa0049960 MtrunA17_Chr4g0009011 40.184 326 154 6 223 527 1 306 3.03e-60 202
Msa0049960 MtrunA17_Chr8g0338801 68.148 135 42 1 393 526 81 215 5.49e-60 201
Msa0049960 MtrunA17_Chr6g0454931 55.000 180 79 1 30 209 590 767 2.30e-53 193
Msa0049960 MtrunA17_Chr4g0005601 57.325 157 66 1 62 217 1 157 8.20e-52 174
Msa0049960 MtrunA17_Chr8g0338811 75.000 108 27 0 159 266 1 108 7.99e-48 162
Msa0049960 MtrunA17_Chr6g0454911 39.004 241 141 4 273 511 1 237 2.84e-47 165
Msa0049960 MtrunA17_Chr3g0114401 66.379 116 39 0 36 151 408 523 2.23e-45 167
Msa0049960 MtrunA17_Chr8g0338821 58.268 127 45 2 9 127 62 188 1.07e-39 142
Msa0049960 MtrunA17_Chr4g0041441 30.203 394 248 8 57 437 543 922 1.80e-37 147
Msa0049960 MtrunA17_Chr8g0343781 76.543 81 19 0 427 507 1 81 5.08e-36 129
Msa0049960 MtrunA17_Chr3g0135541 34.137 249 124 7 311 520 38 285 2.35e-35 135
Msa0049960 MtrunA17_Chr4g0041431 35.545 211 132 1 47 257 364 570 7.71e-33 133
Msa0049960 MtrunA17_Chr7g0248121 35.747 221 139 2 34 254 532 749 1.27e-32 133
Msa0049960 MtrunA17_Chr4g0041231 29.091 440 236 13 24 437 522 911 1.51e-32 132
Msa0049960 MtrunA17_Chr7g0256881 36.449 214 134 2 31 243 519 731 2.16e-32 132
Msa0049960 MtrunA17_Chr8g0363851 33.891 239 136 4 31 249 347 583 3.44e-32 132
Msa0049960 MtrunA17_Chr3g0135511 40.299 134 79 1 387 520 1 133 4.48e-32 121
Msa0049960 MtrunA17_Chr8g0348541 35.211 213 137 1 31 243 534 745 1.41e-31 130
Msa0049960 MtrunA17_Chr3g0135571 39.552 134 80 1 387 520 1 133 1.91e-31 119
Msa0049960 MtrunA17_Chr2g0319851 36.522 230 143 3 26 254 559 786 3.12e-31 129
Msa0049960 MtrunA17_Chr2g0319851 39.394 132 72 2 131 256 734 863 8.91e-14 74.7
Msa0049960 MtrunA17_Chr7g0248511 36.190 210 133 1 34 243 538 746 1.67e-30 126
Msa0049960 MtrunA17_Chr7g0248521 34.742 213 138 1 34 246 531 742 3.80e-29 122
Msa0049960 MtrunA17_Chr4g0041611 35.000 220 131 3 35 244 533 750 4.33e-29 122
Msa0049960 MtrunA17_Chr3g0084841 29.437 231 159 3 31 260 532 759 5.74e-29 122
Msa0049960 MtrunA17_Chr4g0042011 35.714 182 116 1 32 212 534 715 7.36e-29 121
Msa0049960 MtrunA17_Chr3g0084721 30.702 228 153 4 27 254 528 750 4.46e-28 119
Msa0049960 MtrunA17_Chr4g0014821 41.353 133 74 3 394 526 4 132 4.76e-28 110
Msa0049960 MtrunA17_Chr3g0081531 32.273 220 147 2 35 254 523 740 8.23e-28 118
Msa0049960 MtrunA17_Chr6g0486311 33.761 234 133 4 39 257 538 764 1.81e-27 117
Msa0049960 MtrunA17_Chr6g0485991 29.167 432 238 15 39 437 538 934 1.90e-27 117
Msa0049960 MtrunA17_Chr6g0482111 31.019 216 146 3 35 249 532 745 4.60e-27 116
Msa0049960 MtrunA17_Chr2g0299811 30.204 245 166 4 27 271 371 610 1.75e-26 114
Msa0049960 MtrunA17_Chr4g0041241 35.955 178 112 2 37 213 537 713 2.48e-26 114
Msa0049960 MtrunA17_Chr6g0486731 36.493 211 122 3 82 281 581 790 3.57e-26 113
Msa0049960 MtrunA17_Chr3g0119001 25.832 511 299 20 33 496 535 1012 5.47e-26 112
Msa0049960 MtrunA17_Chr6g0486301 27.107 439 248 14 37 437 532 936 7.54e-26 112
Msa0049960 MtrunA17_Chr8g0353371 30.702 228 154 3 31 256 541 766 7.63e-26 112
Msa0049960 MtrunA17_Chr3g0084731 28.283 297 190 7 27 303 526 819 1.10e-25 112
Msa0049960 MtrunA17_Chr2g0299561 37.912 182 107 3 34 213 533 710 1.15e-25 112
Msa0049960 MtrunA17_Chr8g0354681 30.473 338 203 11 29 354 526 843 1.88e-25 111
Msa0049960 MtrunA17_Chr4g0041941 31.884 276 173 5 19 281 512 785 1.95e-25 111
Msa0049960 MtrunA17_Chr4g0018431 32.287 223 135 3 35 245 542 760 4.36e-25 110
Msa0049960 MtrunA17_Chr8g0354721 30.952 252 159 6 44 292 545 784 5.57e-25 110
Msa0049960 MtrunA17_Chr7g0243031 32.218 239 149 5 26 256 33 266 1.32e-24 107
Msa0049960 MtrunA17_Chr8g0354701 30.769 234 147 6 57 287 559 780 1.46e-24 108
Msa0049960 MtrunA17_Chr8g0371711 24.672 458 286 14 31 459 533 960 1.50e-24 108
Msa0049960 MtrunA17_Chr6g0486221 38.650 163 91 2 62 215 557 719 2.42e-24 107
Msa0049960 MtrunA17_Chr3g0102271 27.294 425 260 12 34 437 538 934 6.23e-24 106
Msa0049960 MtrunA17_Chr3g0084851 27.753 227 160 3 31 256 531 754 9.05e-24 105
Msa0049960 MtrunA17_Chr3g0102281 26.728 434 266 15 31 437 534 942 1.11e-23 105
Msa0049960 MtrunA17_Chr6g0486481 38.562 153 93 1 61 212 559 711 1.22e-23 105
Msa0049960 MtrunA17_Chr6g0486361 25.227 440 262 11 39 447 538 941 1.52e-23 105
Msa0049960 MtrunA17_Chr8g0354711 29.536 237 153 4 31 256 519 752 2.15e-23 105
Msa0049960 MtrunA17_Chr2g0299921 29.508 244 167 4 27 270 522 760 4.70e-23 103
Msa0049960 MtrunA17_Chr2g0299851 29.918 244 166 4 27 270 523 761 5.31e-23 103
Msa0049960 MtrunA17_Chr3g0119601 33.043 230 149 4 31 256 522 750 6.21e-23 103
Msa0049960 MtrunA17_Chr8g0343671 33.186 226 138 4 26 243 563 783 6.68e-23 103
Msa0049960 MtrunA17_Chr2g0330121 30.396 227 147 4 35 254 350 572 8.12e-23 102
Msa0049960 MtrunA17_Chr2g0298531 30.667 225 148 3 34 254 538 758 1.00e-22 102
Msa0049960 MtrunA17_Chr4g0041981 34.270 178 112 2 33 205 39 216 1.12e-22 97.8
Msa0049960 MtrunA17_Chr2g0299841 29.493 217 150 3 27 243 565 778 1.28e-22 102
Msa0049960 MtrunA17_Chr2g0298291 31.111 225 147 3 34 254 533 753 1.74e-22 102
Msa0049960 MtrunA17_Chr2g0319921 31.496 254 145 5 32 256 534 787 1.96e-22 102
Msa0049960 MtrunA17_Chr4g0010521 29.075 227 158 3 35 260 523 747 2.07e-22 102
Msa0049960 MtrunA17_Chr3g0084151 28.870 239 148 5 53 290 543 760 3.13e-22 101
Msa0049960 MtrunA17_Chr6g0454901 50.526 95 46 1 35 128 337 431 4.34e-22 99.0
Msa0049960 MtrunA17_Chr4g0005291 29.719 249 161 5 31 270 580 823 6.51e-22 100
Msa0049960 MtrunA17_Chr2g0319821 31.102 254 146 4 32 256 563 816 6.55e-22 100
Msa0049960 MtrunA17_Chr2g0319821 41.860 86 50 0 131 216 738 823 6.96e-11 65.1
Msa0049960 MtrunA17_Chr3g0102171 25.935 428 271 15 31 437 534 936 8.48e-22 99.8
Msa0049960 MtrunA17_Chr3g0118981 30.802 237 144 4 34 254 538 770 8.73e-22 99.8
Msa0049960 MtrunA17_Chr6g0481011 23.605 466 302 15 27 465 538 976 9.10e-22 99.8
Msa0049960 MtrunA17_Chr6g0480051 33.184 223 125 4 35 256 317 516 9.60e-22 99.4
Msa0049960 MtrunA17_Chr3g0102131 26.790 433 258 11 31 437 536 935 1.15e-21 99.4
Msa0049960 MtrunA17_Chr4g0041951 33.511 188 120 1 38 225 590 772 1.52e-21 99.0
Msa0049960 MtrunA17_Chr6g0479651 33.761 234 129 6 35 267 548 756 1.85e-21 99.0
Msa0049960 MtrunA17_Chr8g0342791 30.508 236 147 5 31 254 499 729 2.05e-21 99.0
Msa0049960 MtrunA17_Chr3g0102261 30.962 239 153 4 31 261 536 770 2.47e-21 98.6
Msa0049960 MtrunA17_Chr4g0005391 32.870 216 134 3 35 243 574 785 3.40e-21 97.8
Msa0049960 MtrunA17_Chr7g0248201 40.741 135 77 2 120 254 7 138 3.48e-21 92.4
Msa0049960 MtrunA17_Chr7g0248201 30.921 152 82 2 130 258 64 215 2.54e-13 69.7
Msa0049960 MtrunA17_Chr4g0041931 34.831 178 106 3 25 192 523 700 3.93e-21 97.8
Msa0049960 MtrunA17_Chr2g0299881 29.545 220 152 3 27 246 528 744 4.83e-21 97.8
Msa0049960 MtrunA17_Chr6g0486271 36.000 150 95 1 54 202 548 697 6.03e-21 96.7
Msa0049960 MtrunA17_Chr7g0242751 36.810 163 102 1 53 214 580 742 6.87e-21 96.7
Msa0049960 MtrunA17_Chr3g0102121 29.680 219 143 3 31 242 536 750 7.42e-21 97.1
Msa0049960 MtrunA17_Chr7g0242801 31.963 219 124 3 62 255 634 852 9.10e-21 96.7
Msa0049960 MtrunA17_Chr7g0242801 36.000 150 86 2 110 256 761 903 2.10e-15 79.7
Msa0049960 MtrunA17_Chr5g0439951 27.645 293 167 7 22 294 506 773 1.18e-20 96.3
Msa0049960 MtrunA17_Chr8g0343631 29.572 257 148 5 26 251 540 794 1.25e-20 96.3
Msa0049960 MtrunA17_Chr5g0394041 33.962 159 104 1 53 210 159 317 1.79e-20 95.5
Msa0049960 MtrunA17_Chr8g0350111 32.143 168 104 1 32 189 39 206 3.10e-20 94.7
Msa0049960 MtrunA17_Chr4g0009281 50.602 83 39 1 33 115 94 174 3.30e-20 88.2
Msa0049960 MtrunA17_Chr8g0379351 25.112 446 284 14 35 457 74 492 4.05e-20 93.6
Msa0049960 MtrunA17_Chr8g0350081 30.851 188 126 2 32 216 39 225 5.69e-20 93.6
Msa0049960 MtrunA17_Chr6g0486521 31.915 188 113 3 37 213 536 719 6.27e-20 94.0
Msa0049960 MtrunA17_Chr4g0020591 31.019 216 138 3 35 243 529 740 1.60e-19 92.8
Msa0049960 MtrunA17_Chr6g0451551 24.051 395 263 9 35 417 677 1046 1.60e-19 92.8
Msa0049960 MtrunA17_Chr6g0454861 43.373 83 47 0 431 513 1 83 2.70e-19 83.6
Msa0049960 MtrunA17_Chr4g0010651 26.872 227 163 3 35 260 525 749 4.90e-19 91.3
Msa0049960 MtrunA17_Chr8g0342641 28.641 206 136 3 31 226 504 708 9.20e-19 90.5
Msa0049960 MtrunA17_Chr6g0482511 28.455 246 167 5 57 298 582 822 9.43e-19 90.1
Msa0049960 MtrunA17_Chr4g0005341 29.333 225 150 4 28 248 35 254 2.39e-18 88.2
Msa0049960 MtrunA17_Chr4g0006771 26.396 394 208 14 58 417 564 909 2.56e-18 89.0
Msa0049960 MtrunA17_Chr3g0104861 29.208 202 127 5 26 214 513 711 2.57e-18 88.6
Msa0049960 MtrunA17_Chr8g0350061 29.518 166 107 2 34 189 8 173 3.05e-18 86.7
Msa0049960 MtrunA17_Chr7g0242811 34.969 163 105 1 53 214 577 739 5.29e-18 87.8
Msa0049960 MtrunA17_Chr8g0343661 27.208 283 169 6 34 284 238 515 5.89e-18 87.4
Msa0049960 MtrunA17_Chr4g0008981 38.462 104 62 1 426 527 5 108 7.46e-18 80.9
Msa0049960 MtrunA17_Chr8g0342911 28.512 242 154 5 31 266 539 767 1.32e-17 86.7
Msa0049960 MtrunA17_Chr4g0005261 25.680 331 191 7 31 333 520 823 1.82e-17 86.3
Msa0049960 MtrunA17_Chr5g0442761 26.872 227 161 4 29 254 525 747 2.14e-17 86.3
Msa0049960 MtrunA17_Chr4g0005331 27.759 299 191 8 31 313 595 884 2.17e-17 85.9
Msa0049960 MtrunA17_Chr4g0009211 44.086 93 52 0 426 518 5 97 2.67e-17 79.0
Msa0049960 MtrunA17_Chr6g0479701 29.870 231 132 5 31 254 543 750 3.38e-17 85.5
Msa0049960 MtrunA17_Chr6g0480321 28.507 221 135 4 35 254 395 593 3.96e-17 85.1
Msa0049960 MtrunA17_Chr1g0146421 28.141 199 121 2 58 256 558 734 4.42e-17 85.1
Msa0049960 MtrunA17_Chr1g0153511 25.914 301 200 10 35 322 487 777 5.31e-17 84.7
Msa0049960 MtrunA17_Chr8g0342131 30.952 168 110 1 31 192 530 697 5.63e-17 84.3
Msa0049960 MtrunA17_Chr1g0172811 24.499 449 286 15 34 442 526 961 7.24e-17 84.3
Msa0049960 MtrunA17_Chr6g0478451 26.027 219 140 2 31 249 540 736 9.65e-17 84.0
Msa0049960 MtrunA17_Chr6g0480911 28.095 210 143 3 57 264 565 768 1.84e-16 83.2
Msa0049960 MtrunA17_Chr8g0342621 26.769 325 196 7 31 317 520 840 2.09e-16 82.8
Msa0049960 MtrunA17_Chr2g0299791 30.000 220 151 3 27 246 524 740 2.47e-16 82.8
Msa0049960 MtrunA17_Chr6g0480421 24.573 293 192 6 35 323 399 666 3.61e-16 82.0
Msa0049960 MtrunA17_Chr3g0119591 34.416 154 98 2 28 178 241 394 4.06e-16 80.5
Msa0049960 MtrunA17_Chr8g0342671 28.870 239 155 5 29 256 515 749 4.73e-16 81.6
Msa0049960 MtrunA17_Chr6g0478771 24.163 418 246 13 35 431 526 893 6.42e-16 81.3
Msa0049960 MtrunA17_Chr6g0478841 29.048 210 125 4 35 243 526 712 8.40e-16 80.9
Msa0049960 MtrunA17_Chr8g0343611 30.323 155 99 2 26 172 355 508 1.09e-15 79.7
Msa0049960 MtrunA17_Chr6g0480981 27.715 267 182 7 31 292 268 528 1.27e-15 80.1
Msa0049960 MtrunA17_Chr4g0005401 25.000 260 145 4 31 246 536 789 2.04e-15 79.7
Msa0049960 MtrunA17_Chr8g0351551 26.446 242 159 5 31 266 526 754 3.03e-15 79.3
Msa0049960 MtrunA17_Chr8g0368251 27.919 197 119 3 58 254 561 734 3.36e-15 79.0
Msa0049960 MtrunA17_Chr8g0342691 24.898 245 154 3 34 249 518 761 3.58e-15 79.0
Msa0049960 MtrunA17_Chr4g0025741 28.636 220 128 5 31 246 531 725 4.93e-15 78.2
Msa0049960 MtrunA17_Chr3g0084761 30.159 126 87 1 62 187 1 125 5.28e-15 71.6
Msa0049960 MtrunA17_Chr8g0343581 29.817 218 141 3 34 243 577 790 6.45e-15 78.2
Msa0049960 MtrunA17_Chr1g0172831 28.054 221 142 5 34 243 514 728 1.02e-14 77.4
Msa0049960 MtrunA17_Chr8g0353001 26.432 227 157 4 31 250 526 749 1.36e-14 77.0
Msa0049960 MtrunA17_Chr4g0025831 24.257 404 234 11 31 417 533 881 2.60e-14 76.3
Msa0049960 MtrunA17_Chr8g0363891 42.105 114 66 0 133 246 2 115 3.05e-14 75.9
Msa0049960 MtrunA17_Chr6g0479001 26.180 233 147 4 35 266 526 734 4.43e-14 75.5
Msa0049960 MtrunA17_Chr6g0479671 25.517 290 176 7 31 317 535 787 5.81e-14 75.1
Msa0049960 MtrunA17_Chr4g0005361 30.435 184 112 3 85 254 31 212 8.29e-14 73.9
Msa0049960 MtrunA17_Chr4g0025771 23.005 426 252 12 57 468 18 381 9.40e-14 73.9
Msa0049960 MtrunA17_Chr4g0025811 23.734 316 210 7 31 340 529 819 1.21e-13 73.9
Msa0049960 MtrunA17_Chr6g0479051 28.992 238 140 8 35 269 505 716 1.35e-13 73.9
Msa0049960 MtrunA17_Chr4g0005731 28.105 153 102 2 28 172 516 668 3.50e-13 72.4
Msa0049960 MtrunA17_Chr6g0480461 27.411 197 121 2 58 254 609 783 4.22e-13 72.4
Msa0049960 MtrunA17_Chr6g0479761 25.526 333 202 10 31 347 394 696 4.82e-13 72.0
Msa0049960 MtrunA17_Chr6g0480361 29.148 223 136 3 27 249 28 228 5.93e-13 70.9
Msa0049960 MtrunA17_Chr2g0300251 24.919 309 206 9 125 417 615 913 6.34e-13 71.6
Msa0049960 MtrunA17_Chr8g0338911 66.667 42 14 0 62 103 1 42 9.96e-13 62.8
Msa0049960 MtrunA17_Chr6g0479821 26.106 226 139 4 31 249 536 740 1.25e-12 70.9
Msa0049960 MtrunA17_Chr6g0479841 26.872 227 137 5 31 254 191 391 2.68e-12 69.7
Msa0049960 MtrunA17_Chr6g0480521 25.792 221 141 4 35 254 538 736 2.93e-12 69.7
Msa0049960 MtrunA17_Chr8g0372681 26.872 227 158 4 31 251 525 749 2.94e-12 69.7
Msa0049960 MtrunA17_Chr2g0281531 28.505 214 143 4 57 266 101 308 3.46e-12 68.2
Msa0049960 MtrunA17_Chr6g0482141 27.542 236 149 6 49 273 576 800 3.75e-12 69.3
Msa0049960 MtrunA17_Chr8g0374291 32.117 137 91 2 123 258 646 781 6.69e-12 68.2
Msa0049960 MtrunA17_Chr3g0102241 30.075 133 83 2 31 154 37 168 1.05e-11 63.9
Msa0049960 MtrunA17_Chr4g0005101 26.957 230 137 4 31 234 564 788 1.07e-11 67.8
Msa0049960 MtrunA17_Chr6g0479731 30.000 170 97 3 80 249 578 725 1.21e-11 67.4
Msa0049960 MtrunA17_Chr5g0415831 33.621 116 75 1 134 249 4 117 1.40e-11 66.6
Msa0049960 MtrunA17_Chr6g0484161 27.363 201 122 4 58 256 584 762 1.56e-11 67.4
Msa0049960 MtrunA17_Chr6g0480151 31.061 132 89 1 125 256 605 734 1.76e-11 67.0
Msa0049960 MtrunA17_Chr8g0342731 27.568 185 113 2 85 249 6 189 1.87e-11 67.0
Msa0049960 MtrunA17_Chr4g0025751 24.521 261 157 5 31 287 530 754 1.92e-11 67.0
Msa0049960 MtrunA17_Chr6g0480271 27.919 197 120 2 58 254 564 738 2.34e-11 66.6
Msa0049960 MtrunA17_Chr6g0480041 25.225 222 141 6 35 254 557 755 3.49e-11 66.2
Msa0049960 MtrunA17_Chr6g0479621 26.457 223 141 4 35 256 536 736 3.98e-11 65.9
Msa0049960 MtrunA17_Chr6g0480311 26.866 201 122 5 58 256 552 729 4.08e-11 65.9
Msa0049960 MtrunA17_Chr6g0481251 25.939 293 181 8 58 340 422 688 4.14e-11 65.9
Msa0049960 MtrunA17_Chr5g0417051 40.196 102 60 1 153 254 6 106 4.64e-11 63.9
Msa0049960 MtrunA17_Chr6g0481141 27.083 192 118 3 58 249 615 784 6.24e-11 65.5
Msa0049960 MtrunA17_Chr5g0415551 35.821 134 78 3 142 268 421 553 8.74e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0049960 AT5G36930.4 43.460 237 130 2 31 263 519 755 1.41e-52 193
Msa0049960 AT5G36930.1 43.460 237 130 2 31 263 519 755 1.41e-52 193
Msa0049960 AT5G36930.3 43.460 237 130 2 31 263 519 755 1.55e-52 193
Msa0049960 AT5G36930.2 43.460 237 130 2 31 263 522 758 1.73e-52 192
Msa0049960 AT1G27180.5 34.597 211 136 1 48 256 596 806 1.34e-32 133
Msa0049960 AT1G27180.8 34.597 211 136 1 48 256 596 806 1.34e-32 133
Msa0049960 AT1G27180.7 34.597 211 136 1 48 256 422 632 1.52e-32 133
Msa0049960 AT1G27180.6 34.597 211 136 1 48 256 422 632 1.52e-32 133
Msa0049960 AT1G27180.4 34.597 211 136 1 48 256 422 632 1.52e-32 133
Msa0049960 AT1G27180.1 34.597 211 136 1 48 256 760 970 1.63e-32 133
Msa0049960 AT1G27180.2 34.597 211 136 1 48 256 598 808 1.65e-32 133
Msa0049960 AT1G27180.3 34.597 211 136 1 48 256 598 808 2.04e-32 132
Msa0049960 AT1G27170.1 35.681 213 131 3 48 256 587 797 1.95e-31 130
Msa0049960 AT1G27170.2 35.681 213 131 3 48 256 587 797 2.04e-31 130
Msa0049960 AT4G19510.2 27.804 428 235 16 35 413 525 927 2.00e-30 127
Msa0049960 AT4G19510.6 30.789 380 215 15 35 385 538 898 2.77e-28 120
Msa0049960 AT4G19510.8 30.688 378 218 14 35 385 528 888 3.11e-28 120
Msa0049960 AT4G19510.1 30.688 378 218 14 35 385 528 888 3.11e-28 120
Msa0049960 AT4G19510.5 30.789 380 215 15 35 385 565 925 3.21e-28 120
Msa0049960 AT4G19510.4 30.789 380 215 15 35 385 565 925 3.21e-28 120
Msa0049960 AT4G19510.7 30.789 380 215 15 35 385 565 925 3.21e-28 120
Msa0049960 AT4G19510.9 31.847 314 181 12 35 327 538 839 9.23e-28 118
Msa0049960 AT4G19510.10 31.847 314 181 12 35 327 525 826 1.33e-27 118
Msa0049960 AT4G19510.3 31.847 314 181 12 35 327 565 866 1.34e-27 118
Msa0049960 AT5G38340.2 28.162 419 261 13 35 434 373 770 2.25e-27 117
Msa0049960 AT5G38340.3 28.162 419 261 13 35 434 579 976 2.61e-27 117
Msa0049960 AT5G38340.1 28.162 419 261 13 35 434 579 976 2.61e-27 117
Msa0049960 AT5G17880.2 36.517 178 108 2 85 262 616 788 2.95e-27 117
Msa0049960 AT5G17880.1 36.517 178 108 2 85 262 616 788 3.36e-27 117
Msa0049960 AT4G19530.1 27.459 488 294 18 23 468 546 1015 6.23e-27 116
Msa0049960 AT4G12010.1 31.034 232 144 4 35 254 537 764 2.72e-26 114
Msa0049960 AT5G17680.1 32.456 228 141 4 27 246 516 738 5.87e-25 110
Msa0049960 AT5G17680.2 32.456 228 141 4 27 246 517 739 6.25e-25 110
Msa0049960 AT4G19500.2 33.198 247 140 6 35 268 544 778 2.43e-24 107
Msa0049960 AT5G45060.2 24.490 539 285 20 29 496 547 1034 4.82e-24 107
Msa0049960 AT5G45060.1 24.490 539 285 20 29 496 547 1034 4.82e-24 107
Msa0049960 AT4G19500.1 33.198 247 140 6 35 268 1067 1301 5.11e-24 107
Msa0049960 AT5G38350.1 34.862 218 129 4 35 243 375 588 7.83e-24 106
Msa0049960 AT4G19530.2 32.780 241 142 6 23 249 546 780 1.02e-23 106
Msa0049960 AT2G16870.3 30.526 285 177 8 28 300 241 516 1.48e-23 105
Msa0049960 AT2G16870.2 30.526 285 177 8 28 300 241 516 1.48e-23 105
Msa0049960 AT5G44510.3 32.579 221 137 3 35 243 552 772 1.62e-23 105
Msa0049960 AT2G16870.1 30.526 285 177 8 28 300 515 790 1.64e-23 105
Msa0049960 AT5G44510.1 32.579 221 137 3 35 243 552 772 1.95e-23 105
Msa0049960 AT5G44510.2 32.579 221 137 3 35 243 552 772 1.99e-23 105
Msa0049960 AT5G44510.4 32.579 221 137 3 35 243 552 772 2.02e-23 105
Msa0049960 AT1G65850.1 26.841 421 267 15 35 434 553 953 2.79e-23 104
Msa0049960 AT1G65850.3 26.841 421 267 15 35 434 443 843 3.11e-23 104
Msa0049960 AT1G65850.2 26.841 421 267 15 35 434 568 968 3.42e-23 104
Msa0049960 AT3G25505.1 33.333 186 118 2 35 214 348 533 4.98e-23 103
Msa0049960 AT5G18360.1 27.113 284 182 6 9 273 493 770 5.45e-23 103
Msa0049960 AT5G45230.1 32.340 235 141 5 33 254 549 778 6.13e-23 103
Msa0049960 AT4G08450.2 34.392 189 113 2 35 213 528 715 1.32e-21 99.8
Msa0049960 AT4G08450.1 34.392 189 113 2 35 213 528 715 1.48e-21 99.8
Msa0049960 AT1G69550.1 30.093 216 144 3 35 243 593 808 4.37e-21 98.2
Msa0049960 AT1G69550.1 36.567 134 84 1 128 260 1003 1136 5.14e-11 66.2
Msa0049960 AT4G12020.10 33.333 231 139 6 24 246 1140 1363 5.51e-21 98.2
Msa0049960 AT4G12020.7 33.333 231 139 6 24 246 1140 1363 6.22e-21 97.8
Msa0049960 AT4G12020.4 33.333 231 139 6 24 246 1140 1363 6.30e-21 97.8
Msa0049960 AT4G12020.5 33.333 231 139 6 24 246 1073 1296 6.42e-21 97.8
Msa0049960 AT4G12020.6 33.333 231 139 6 24 246 1140 1363 6.54e-21 97.8
Msa0049960 AT4G12020.8 33.333 231 139 6 24 246 1140 1363 6.54e-21 97.8
Msa0049960 AT5G41740.3 30.415 217 137 5 35 243 360 570 7.21e-21 97.4
Msa0049960 AT5G41740.1 30.415 217 137 5 35 243 512 722 8.63e-21 97.1
Msa0049960 AT5G41740.2 30.415 217 137 5 35 243 512 722 8.98e-21 97.1
Msa0049960 AT5G45250.1 25.568 528 285 19 31 486 549 1040 1.94e-20 96.3
Msa0049960 AT5G44870.2 23.364 535 325 20 8 473 300 818 2.22e-20 95.9
Msa0049960 AT3G04220.3 34.899 149 97 0 81 229 649 797 2.60e-20 95.5
Msa0049960 AT5G44870.1 23.551 535 324 21 8 473 564 1082 3.33e-20 95.5
Msa0049960 AT4G14370.2 29.333 225 143 5 36 249 525 744 3.43e-20 95.1
Msa0049960 AT4G14370.3 29.333 225 143 5 36 249 525 744 3.43e-20 95.1
Msa0049960 AT4G14370.1 29.333 225 143 5 36 249 482 701 3.48e-20 95.1
Msa0049960 AT5G40060.1 29.242 277 162 10 35 282 335 606 7.14e-20 94.4
Msa0049960 AT5G40060.2 29.242 277 162 10 35 282 335 606 9.84e-20 93.6
Msa0049960 AT1G56520.2 27.572 243 157 5 28 260 519 752 1.03e-19 94.0
Msa0049960 AT1G56520.4 27.572 243 157 5 28 260 519 752 1.08e-19 93.6
Msa0049960 AT1G56520.3 27.572 243 157 5 28 260 357 590 1.15e-19 93.2
Msa0049960 AT1G56520.1 27.572 243 157 5 28 260 519 752 1.39e-19 93.2
Msa0049960 AT5G45210.5 33.333 195 111 6 29 212 513 699 1.60e-19 92.8
Msa0049960 AT5G45210.1 33.333 195 111 6 29 212 494 680 1.70e-19 92.8
Msa0049960 AT5G45210.4 33.333 195 111 6 29 212 522 708 1.81e-19 92.8
Msa0049960 AT4G36150.1 28.511 235 150 4 33 254 543 772 3.47e-19 92.0
Msa0049960 AT1G63880.1 28.507 221 147 3 27 240 520 736 3.74e-19 92.0
Msa0049960 AT5G41540.1 28.767 219 143 4 35 245 525 738 4.42e-19 91.7
Msa0049960 AT1G63870.1 27.778 216 145 3 35 243 523 734 4.45e-19 91.7
Msa0049960 AT5G46450.2 28.866 291 186 9 23 303 493 772 4.55e-19 91.7
Msa0049960 AT1G63880.2 28.507 221 147 3 27 240 520 736 4.55e-19 91.3
Msa0049960 AT5G46450.3 28.866 291 186 9 23 303 516 795 5.12e-19 91.7
Msa0049960 AT1G31540.2 34.409 186 114 2 35 213 527 711 5.45e-19 91.7
Msa0049960 AT1G31540.3 34.409 186 114 2 35 213 527 711 5.69e-19 91.3
Msa0049960 AT1G31540.1 34.409 186 114 2 35 213 527 711 5.69e-19 91.3
Msa0049960 AT5G46450.1 28.866 291 186 9 23 303 516 795 6.08e-19 91.3
Msa0049960 AT5G41750.1 28.571 217 142 4 35 243 525 736 7.40e-19 90.9
Msa0049960 AT5G41750.2 28.571 217 142 4 35 243 525 736 7.40e-19 90.9
Msa0049960 AT2G14080.2 30.594 219 142 3 35 243 438 656 7.99e-19 90.9
Msa0049960 AT4G12020.3 32.218 239 139 7 24 246 1140 1371 8.21e-19 91.3
Msa0049960 AT4G12020.3 37.705 122 73 2 128 249 1327 1445 3.27e-11 67.0
Msa0049960 AT4G12020.2 32.218 239 139 7 24 246 1140 1371 8.30e-19 91.3
Msa0049960 AT4G12020.2 37.705 122 73 2 128 249 1327 1445 3.11e-11 67.0
Msa0049960 AT4G12020.1 32.218 239 139 7 24 246 1140 1371 8.42e-19 91.3
Msa0049960 AT4G12020.1 37.705 122 73 2 128 249 1327 1445 2.71e-11 67.0
Msa0049960 AT4G12020.9 32.218 239 139 7 24 246 1140 1371 8.42e-19 91.3
Msa0049960 AT4G12020.9 37.705 122 73 2 128 249 1327 1445 2.71e-11 67.0
Msa0049960 AT2G14080.1 30.594 219 142 3 35 243 571 789 9.08e-19 90.9
Msa0049960 AT3G44480.2 34.731 167 107 2 78 243 663 828 9.33e-19 90.9
Msa0049960 AT3G44480.3 34.731 167 107 2 78 243 663 828 9.81e-19 90.9
Msa0049960 AT3G44480.5 34.731 167 107 2 78 243 663 828 9.81e-19 90.9
Msa0049960 AT3G44480.4 34.731 167 107 2 78 243 663 828 9.84e-19 90.9
Msa0049960 AT3G44480.1 34.731 167 107 2 78 243 663 828 9.84e-19 90.9
Msa0049960 AT3G51570.1 24.853 511 282 20 29 463 540 1024 1.06e-18 90.5
Msa0049960 AT5G22690.2 28.761 226 146 4 35 249 529 750 1.10e-18 90.5
Msa0049960 AT2G17060.1 27.823 248 156 5 25 254 559 801 1.17e-18 90.5
Msa0049960 AT5G45200.2 26.568 271 161 5 32 268 308 574 1.21e-18 90.5
Msa0049960 AT2G17060.2 27.823 248 156 5 25 254 559 801 1.29e-18 90.5
Msa0049960 AT5G45200.1 26.894 264 155 5 39 268 559 818 1.39e-18 90.1
Msa0049960 AT5G22690.1 28.761 226 146 4 35 249 529 750 1.42e-18 90.1
Msa0049960 AT5G22690.4 28.761 226 146 4 35 249 529 750 1.47e-18 90.1
Msa0049960 AT5G22690.3 28.761 226 146 4 35 249 529 750 1.57e-18 89.7
Msa0049960 AT5G45200.3 26.568 271 161 5 32 268 552 818 1.82e-18 89.7
Msa0049960 AT5G49140.1 29.000 300 180 11 9 283 494 785 3.76e-18 89.0
Msa0049960 AT1G63750.1 27.397 219 148 4 33 243 359 574 7.08e-18 87.8
Msa0049960 AT1G63750.2 27.397 219 148 4 33 243 359 574 7.08e-18 87.8
Msa0049960 AT4G16890.5 32.020 203 126 4 22 213 495 696 7.14e-18 88.2
Msa0049960 AT4G16890.5 28.938 273 179 7 99 367 743 1004 1.42e-14 77.8
Msa0049960 AT4G16890.4 32.020 203 126 4 22 213 349 550 7.61e-18 87.8
Msa0049960 AT4G16890.4 33.103 145 93 2 99 243 597 737 1.09e-12 71.6
Msa0049960 AT4G16890.1 32.020 203 126 4 22 213 504 705 7.94e-18 87.8
Msa0049960 AT4G16890.1 28.938 273 179 7 99 367 752 1013 1.58e-14 77.4
Msa0049960 AT4G16890.2 32.020 203 126 4 22 213 504 705 8.63e-18 87.8
Msa0049960 AT4G16890.2 33.103 145 93 2 99 243 752 892 1.04e-12 71.6
Msa0049960 AT4G16890.3 32.020 203 126 4 22 213 495 696 8.98e-18 87.8
Msa0049960 AT4G16890.3 28.938 273 179 7 99 367 743 1004 3.94e-14 76.3
Msa0049960 AT5G58120.1 29.474 190 126 2 34 216 524 712 9.02e-18 87.8
Msa0049960 AT5G40910.2 28.774 212 144 4 35 244 330 536 9.47e-18 87.4
Msa0049960 AT5G40910.3 28.774 212 144 4 35 244 330 536 9.47e-18 87.4
Msa0049960 AT5G40910.5 28.774 212 144 4 35 244 330 536 9.47e-18 87.4
Msa0049960 AT5G40910.7 28.774 212 144 4 35 244 330 536 9.47e-18 87.4
Msa0049960 AT5G40910.8 28.774 212 144 4 35 244 330 536 9.47e-18 87.4
Msa0049960 AT3G51570.2 24.308 506 262 22 29 463 540 995 1.05e-17 87.4
Msa0049960 AT5G40910.6 28.774 212 144 4 35 244 330 536 1.16e-17 87.0
Msa0049960 AT5G40910.4 28.774 212 144 4 35 244 330 536 1.16e-17 87.0
Msa0049960 AT5G40910.1 28.774 212 144 4 35 244 514 720 1.20e-17 87.4
Msa0049960 AT5G40910.9 28.774 212 144 4 35 244 514 720 1.20e-17 87.4
Msa0049960 AT1G63750.3 27.397 219 148 4 33 243 526 741 1.35e-17 87.0
Msa0049960 AT5G17970.1 30.180 222 140 7 35 246 534 750 2.94e-17 85.9
Msa0049960 AT1G56510.1 25.620 242 166 5 23 256 512 747 3.82e-17 85.5
Msa0049960 AT1G56540.1 25.000 236 166 4 28 256 518 749 4.22e-17 85.5
Msa0049960 AT1G56540.2 25.000 236 166 4 28 256 354 585 4.58e-17 85.5
Msa0049960 AT5G46510.2 31.004 229 143 5 35 254 527 749 4.71e-17 85.5
Msa0049960 AT5G46510.1 31.004 229 143 5 35 254 527 749 5.24e-17 85.5
Msa0049960 AT5G46260.1 27.562 283 178 7 36 298 527 802 5.40e-17 85.1
Msa0049960 AT5G46520.1 31.004 229 143 5 35 254 528 750 6.36e-17 85.1
Msa0049960 AT5G46520.2 31.004 229 143 5 35 254 566 788 8.66e-17 84.7
Msa0049960 AT5G45260.2 30.638 235 127 8 34 239 496 723 9.40e-17 84.3
Msa0049960 AT5G45260.3 30.638 235 127 8 34 239 496 723 9.40e-17 84.3
Msa0049960 AT3G25510.2 31.148 183 126 0 78 260 409 591 9.46e-17 84.3
Msa0049960 AT3G25510.1 31.148 183 126 0 78 260 409 591 9.46e-17 84.3
Msa0049960 AT5G45260.1 30.638 235 127 8 34 239 496 723 1.05e-16 84.3
Msa0049960 AT5G48770.1 28.505 214 133 5 9 203 489 701 1.05e-16 84.3
Msa0049960 AT5G46470.1 32.275 189 117 3 35 213 529 716 1.35e-16 84.0
Msa0049960 AT1G72840.4 31.977 172 107 3 27 189 349 519 2.29e-16 83.2
Msa0049960 AT1G72840.1 31.977 172 107 3 27 189 515 685 2.68e-16 82.8
Msa0049960 AT1G72840.2 31.977 172 107 3 27 189 515 685 2.70e-16 83.2
Msa0049960 AT1G72840.3 31.977 172 107 3 27 189 515 685 2.70e-16 83.2
Msa0049960 AT1G64070.1 26.952 397 244 11 27 414 516 875 3.24e-16 82.8
Msa0049960 AT5G41550.1 25.346 217 149 4 35 243 527 738 6.41e-16 81.6
Msa0049960 AT5G46270.4 29.907 214 138 3 35 240 536 745 1.20e-15 80.9
Msa0049960 AT5G51630.3 33.553 152 97 2 89 240 696 843 1.27e-15 80.9
Msa0049960 AT5G51630.3 30.000 190 121 3 35 213 471 659 1.46e-15 80.5
Msa0049960 AT5G46270.1 29.907 214 138 3 35 240 536 745 1.32e-15 80.9
Msa0049960 AT5G46270.5 29.907 214 138 3 35 240 536 745 1.32e-15 80.9
Msa0049960 AT5G51630.1 33.553 152 97 2 89 240 744 891 1.34e-15 80.9
Msa0049960 AT5G51630.1 30.000 190 121 3 35 213 519 707 1.58e-15 80.5
Msa0049960 AT5G51630.4 33.553 152 97 2 89 240 680 827 1.39e-15 80.9
Msa0049960 AT5G51630.4 30.000 190 121 3 35 213 455 643 1.63e-15 80.5
Msa0049960 AT5G51630.6 33.553 152 97 2 89 240 680 827 1.39e-15 80.9
Msa0049960 AT5G51630.6 30.000 190 121 3 35 213 455 643 1.63e-15 80.5
Msa0049960 AT5G46270.2 29.907 214 138 3 35 240 525 734 1.44e-15 80.5
Msa0049960 AT5G46270.3 29.907 214 138 3 35 240 525 734 1.45e-15 80.5
Msa0049960 AT5G51630.2 33.553 152 97 2 89 240 680 827 1.47e-15 80.5
Msa0049960 AT5G51630.2 30.000 190 121 3 35 213 455 643 1.68e-15 80.5
Msa0049960 AT5G51630.5 33.553 152 97 2 89 240 680 827 1.64e-15 80.5
Msa0049960 AT5G51630.5 30.000 190 121 3 35 213 455 643 2.43e-15 79.7
Msa0049960 AT5G18350.1 29.353 201 136 2 35 229 545 745 3.01e-15 79.7
Msa0049960 AT2G17050.1 25.455 275 144 6 31 249 354 623 3.37e-15 79.7
Msa0049960 AT2G17050.3 25.455 275 144 6 31 249 354 623 3.58e-15 79.3
Msa0049960 AT2G17050.2 25.455 275 144 6 31 249 354 623 3.77e-15 79.3
Msa0049960 AT1G63740.2 27.602 221 148 4 31 243 552 768 3.93e-15 79.3
Msa0049960 AT1G63740.1 27.602 221 148 4 31 243 481 697 4.16e-15 79.0
Msa0049960 AT5G18370.1 27.036 307 198 8 35 324 586 883 6.36e-15 78.6
Msa0049960 AT4G36140.2 25.909 220 126 5 35 246 746 936 9.36e-15 78.2
Msa0049960 AT4G36140.1 25.088 283 150 8 35 304 931 1164 1.26e-14 77.8
Msa0049960 AT4G11170.1 29.279 222 139 6 35 243 525 741 1.67e-14 77.4
Msa0049960 AT5G46490.2 36.691 139 87 1 75 213 637 774 2.42e-14 76.6
Msa0049960 AT5G11250.2 29.146 199 136 3 35 229 578 775 4.66e-14 75.9
Msa0049960 AT5G11250.3 29.146 199 136 3 35 229 496 693 4.84e-14 75.9
Msa0049960 AT5G11250.1 29.146 199 136 3 35 229 496 693 4.84e-14 75.9
Msa0049960 AT1G57650.1 29.744 195 122 4 35 218 259 449 7.26e-14 75.1
Msa0049960 AT1G57650.3 30.000 190 118 4 35 213 259 444 7.50e-14 74.7
Msa0049960 AT1G57650.2 29.744 195 122 4 35 218 259 449 7.93e-14 74.7
Msa0049960 AT1G57650.4 30.000 190 118 4 35 213 259 444 8.00e-14 74.7
Msa0049960 AT1G63730.1 24.510 408 233 16 54 443 543 893 8.50e-14 75.1
Msa0049960 AT4G16920.3 23.798 416 227 13 99 441 880 1278 9.06e-14 75.1
Msa0049960 AT4G16920.5 23.798 416 227 13 99 441 880 1278 9.06e-14 75.1
Msa0049960 AT4G16920.2 24.038 416 226 14 99 441 880 1278 9.07e-14 75.1
Msa0049960 AT4G16920.8 24.038 416 226 14 99 441 880 1278 9.07e-14 75.1
Msa0049960 AT4G16920.6 24.038 416 226 14 99 441 880 1278 1.20e-13 74.7
Msa0049960 AT4G16920.4 24.038 416 226 14 99 441 880 1278 1.29e-13 74.3
Msa0049960 AT4G16920.7 24.038 416 226 14 99 441 880 1278 1.29e-13 74.3
Msa0049960 AT5G45050.2 29.808 208 129 7 37 235 492 691 2.53e-13 73.6
Msa0049960 AT4G09435.2 37.705 122 71 2 75 192 22 142 2.98e-13 72.4
Msa0049960 AT4G16950.2 31.111 180 110 3 27 192 511 690 3.38e-13 73.2
Msa0049960 AT4G16950.2 36.522 115 72 1 99 213 886 999 1.69e-12 70.9
Msa0049960 AT4G16950.5 31.111 180 110 3 27 192 511 690 3.64e-13 73.2
Msa0049960 AT4G16950.5 28.155 206 122 3 99 281 886 1088 1.39e-12 71.2
Msa0049960 AT4G09435.1 37.705 122 71 2 75 192 22 142 4.12e-13 72.0
Msa0049960 AT4G16950.6 31.111 180 110 3 27 192 511 690 4.12e-13 72.8
Msa0049960 AT4G16950.6 28.155 206 122 3 99 281 886 1088 1.49e-12 71.2
Msa0049960 AT4G16950.1 31.111 180 110 3 27 192 511 690 4.19e-13 72.8
Msa0049960 AT4G16950.1 36.522 115 72 1 99 213 886 999 1.76e-12 70.9
Msa0049960 AT4G16950.3 31.111 180 110 3 27 192 511 690 4.29e-13 72.8
Msa0049960 AT4G16950.3 36.522 115 72 1 99 213 886 999 1.87e-12 70.9
Msa0049960 AT4G16950.4 31.111 180 110 3 27 192 511 690 5.17e-13 72.8
Msa0049960 AT4G16950.4 36.522 115 72 1 99 213 886 999 2.12e-12 70.5
Msa0049960 AT5G38850.1 26.887 212 144 3 39 243 517 724 6.53e-13 72.0
Msa0049960 AT4G16860.1 29.878 164 112 2 52 213 688 850 7.26e-13 72.0
Msa0049960 AT4G16860.1 29.070 172 117 3 99 270 897 1063 3.46e-11 66.6
Msa0049960 AT3G44400.2 33.813 139 91 1 78 216 619 756 8.11e-13 72.0
Msa0049960 AT3G44400.1 33.813 139 91 1 78 216 619 756 8.11e-13 72.0
Msa0049960 AT3G44400.4 33.813 139 91 1 78 216 619 756 8.11e-13 72.0
Msa0049960 AT3G44400.5 33.813 139 91 1 78 216 619 756 8.11e-13 72.0
Msa0049960 AT3G44400.3 33.813 139 91 1 78 216 619 756 8.11e-13 72.0
Msa0049960 AT5G45050.4 28.440 218 118 6 37 245 353 541 8.23e-13 72.0
Msa0049960 AT4G16940.6 33.803 142 89 3 100 240 691 828 8.59e-13 72.0
Msa0049960 AT4G16940.2 33.803 142 89 3 100 240 691 828 8.61e-13 72.0
Msa0049960 AT4G16940.3 33.803 142 89 3 100 240 691 828 8.61e-13 72.0
Msa0049960 AT4G16940.5 33.803 142 89 3 100 240 691 828 8.61e-13 72.0
Msa0049960 AT4G16940.1 33.803 142 89 3 100 240 691 828 8.70e-13 71.6
Msa0049960 AT4G16940.4 33.803 142 89 3 100 240 691 828 8.73e-13 71.6
Msa0049960 AT5G45050.3 28.440 218 118 6 37 245 492 680 9.01e-13 71.6
Msa0049960 AT4G16860.2 29.878 164 112 2 52 213 526 688 9.56e-13 71.6
Msa0049960 AT4G16860.2 29.070 172 117 3 99 270 735 901 4.39e-11 66.2
Msa0049960 AT5G45050.1 28.440 218 118 6 37 245 492 680 1.09e-12 71.6
Msa0049960 AT3G44670.1 32.836 134 89 1 83 216 670 802 1.33e-12 71.2
Msa0049960 AT3G44670.2 32.836 134 89 1 83 216 670 802 1.33e-12 71.2
Msa0049960 AT4G16920.1 36.522 115 72 1 99 213 880 993 2.55e-12 70.5
Msa0049960 AT4G16920.9 36.522 115 72 1 99 213 880 993 2.69e-12 70.5
Msa0049960 AT4G16900.2 33.562 146 92 3 99 243 678 819 3.03e-12 70.1
Msa0049960 AT4G16900.2 30.939 181 110 4 34 205 482 656 3.08e-12 70.1
Msa0049960 AT4G16900.1 33.562 146 92 3 99 243 678 819 3.40e-12 69.7
Msa0049960 AT4G16900.1 30.939 181 110 4 34 205 482 656 4.76e-12 69.3
Msa0049960 AT4G16900.3 31.148 183 111 4 34 207 482 658 3.91e-12 69.3
Msa0049960 AT4G16960.1 29.630 189 120 6 100 282 733 914 3.98e-12 69.7
Msa0049960 AT4G16960.1 28.333 180 113 4 35 199 523 701 7.34e-11 65.5
Msa0049960 AT1G63860.2 25.405 185 130 2 36 213 495 678 4.59e-12 69.3
Msa0049960 AT1G63860.6 25.405 185 130 2 36 213 495 678 4.73e-12 69.3
Msa0049960 AT1G63860.1 25.405 185 130 2 36 213 495 678 4.82e-12 69.3
Msa0049960 AT3G04220.1 26.263 198 137 3 35 229 577 768 6.06e-12 68.9
Msa0049960 AT3G44630.3 27.094 203 124 3 78 256 688 890 6.23e-12 68.9
Msa0049960 AT1G63860.4 25.405 185 130 2 36 213 495 678 7.05e-12 68.9
Msa0049960 AT1G63860.5 25.405 185 130 2 36 213 495 678 7.05e-12 68.9
Msa0049960 AT1G63860.3 25.405 185 130 2 36 213 495 678 7.05e-12 68.9
Msa0049960 AT3G44630.2 27.094 203 124 3 78 256 688 890 7.69e-12 68.9
Msa0049960 AT3G44630.1 27.094 203 124 3 78 256 688 890 7.69e-12 68.9
Msa0049960 AT3G44630.4 27.094 203 124 3 78 256 688 890 7.69e-12 68.9
Msa0049960 AT4G19520.3 25.874 286 134 8 29 243 496 774 1.90e-11 67.8
Msa0049960 AT4G19520.1 25.874 286 134 8 29 243 496 774 2.25e-11 67.4
Msa0049960 AT4G19520.5 25.874 286 134 8 29 243 496 774 2.50e-11 67.4
Msa0049960 AT4G19520.2 25.874 286 134 8 29 243 496 774 2.89e-11 67.0
Msa0049960 AT4G19520.4 25.874 286 134 8 29 243 496 774 2.89e-11 67.0
Msa0049960 AT3G51560.1 26.705 176 118 5 27 193 482 655 4.51e-11 66.2
Msa0049960 AT1G17600.1 31.193 109 75 0 75 183 572 680 6.66e-11 65.9

Find 97 sgRNAs with CRISPR-Local

Find 155 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTGTCTCCCTTGTATATT+TGG 0.100976 1_2:+3499485 None:intergenic
CTTCCAATCTTCATCATTAA+AGG 0.150220 1_2:+3499456 None:intergenic
TTGAAAACTCTTGTACTTTC+TGG 0.166945 1_2:-3501123 Msa0049960:CDS
GGATGTAACAAGTAATAATA+TGG 0.202420 1_2:-3500839 Msa0049960:CDS
ACCATGTATATCCCCATTTC+AGG 0.224141 1_2:-3500887 Msa0049960:CDS
CGGGTAGCAATTATCCTTCT+TGG 0.269636 1_2:-3499675 Msa0049960:CDS
GTGAATCCATCTCAGTTCTT+TGG 0.278709 1_2:+3501572 None:intergenic
TTCATTGTCTCTTGTTTCCT+TGG 0.284201 1_2:-3500860 Msa0049960:CDS
TTCAAAACTTAGAAGTGTTT+TGG 0.295033 1_2:-3500788 Msa0049960:CDS
GACAATGAACTTCCCTGAAA+TGG 0.311369 1_2:+3500874 None:intergenic
TTTAATCTTAGTATTGAATA+GGG 0.313209 1_2:+3501009 None:intergenic
ACTGCTGTCTATCTAATATA+TGG 0.323461 1_2:-3499355 Msa0049960:CDS
TTCAATTTATAGATCTTCAT+AGG 0.323851 1_2:+3501150 None:intergenic
TTCCTTCTCTCGTTAGGTCT+TGG 0.338463 1_2:-3500933 Msa0049960:CDS
CCGTCCTAACCGGAGATTAT+CGG 0.375115 1_2:-3501602 Msa0049960:CDS
AGCTGCACCTCGGAAAGTTT+AGG 0.376463 1_2:-3501817 Msa0049960:CDS
ATTAAGTACTGATTCTTTCA+AGG 0.392103 1_2:-3501661 Msa0049960:CDS
TGTCCTTTAATGATGAAGAT+TGG 0.400460 1_2:-3499459 Msa0049960:CDS
ACAATGAACTTCCCTGAAAT+GGG 0.406411 1_2:+3500875 None:intergenic
AAGGGTTTAACATCAAATCT+AGG 0.415841 1_2:-3499436 Msa0049960:CDS
CTTGATCATGCCGTCCTAAC+CGG 0.416336 1_2:-3501612 Msa0049960:CDS
AATAGCACGGGTCATGATAA+TGG 0.424078 1_2:+3501853 None:intergenic
TCTACTTCTATTGAATTTGA+AGG 0.432284 1_2:-3501196 Msa0049960:CDS
TAGGCATGAATTGACTGTTA+AGG 0.436702 1_2:-3499380 Msa0049960:CDS
TGAAGTTCCTTCACTTGTAT+AGG 0.441391 1_2:+3499648 None:intergenic
TTAACATCAAATCTAGGATC+TGG 0.468826 1_2:-3499430 Msa0049960:CDS
AACAGAAACTGTAGAGGGAT+TGG 0.473441 1_2:-3501715 Msa0049960:CDS
ATATCCCTATGTGGATATGA+AGG 0.480856 1_2:-3500973 Msa0049960:CDS
TTTGAAAGGTTGCTAAGCAT+TGG 0.481708 1_2:+3500805 None:intergenic
TCAGAGGTACACCATTCCAT+TGG 0.497461 1_2:-3501231 Msa0049960:CDS
TTTCCCTGATAAAATTCATC+GGG 0.500145 1_2:+3501522 None:intergenic
TGCCAAGAGTGTCGATGACC+AGG 0.505697 1_2:+3500608 None:intergenic
ATCTTTCCAAAGAACTGAGA+TGG 0.508076 1_2:-3501578 Msa0049960:CDS
GATACCGATAATCTCCGGTT+AGG 0.509547 1_2:+3501598 None:intergenic
AGTACTTAATCGTAATCTAC+TGG 0.514009 1_2:+3501674 None:intergenic
ATATGGCCATTCAGTTGCTA+TGG 0.518783 1_2:-3499338 Msa0049960:CDS
GATGTAACAAGTAATAATAT+GGG 0.519034 1_2:-3500838 Msa0049960:CDS
CCGATAATCTCCGGTTAGGA+CGG 0.521711 1_2:+3501602 None:intergenic
CTTTAATGATGAAGATTGGA+AGG 0.522139 1_2:-3499455 Msa0049960:CDS
ATTATTACTTGTTACATCCA+AGG 0.522649 1_2:+3500843 None:intergenic
TGGTGTACCTCTGACAAACT+TGG 0.523216 1_2:+3501240 None:intergenic
CACCTGGTCATCGACACTCT+TGG 0.523982 1_2:-3500610 Msa0049960:CDS
CCCTGAAATGGGGATATACA+TGG 0.526094 1_2:+3500886 None:intergenic
CCCAATCAAAAGCGATCTCA+AGG 0.526332 1_2:+3500645 None:intergenic
AAGAACTGAGATGGATTCAC+TGG 0.528073 1_2:-3501569 Msa0049960:CDS
TCAATTTATAGATCTTCATA+GGG 0.531920 1_2:+3501151 None:intergenic
TTCATCGGGTATGTAGTTGA+AGG 0.535946 1_2:+3501536 None:intergenic
TTCATCAACGTCTGAAAATG+TGG 0.536917 1_2:-3499560 Msa0049960:CDS
GGAAGAAGACATGGGGCAGA+TGG 0.537897 1_2:-3501079 Msa0049960:CDS
CAATTTCCATAGCAACTGAA+TGG 0.550789 1_2:+3499332 None:intergenic
TTGTACAAAGATTGACAAGT+TGG 0.550790 1_2:-3501100 Msa0049960:CDS
GGAAAGATACCGATAATCTC+CGG 0.552280 1_2:+3501593 None:intergenic
ATTTCCCTGATAAAATTCAT+CGG 0.552343 1_2:+3501521 None:intergenic
GGATACTGATTGTCACATGA+AGG 0.554468 1_2:-3499605 Msa0049960:CDS
TATACATGGTAGAGAATTCA+CGG 0.555495 1_2:+3500900 None:intergenic
TGGTTAGCCTATACAAGTGA+AGG 0.555588 1_2:-3499655 Msa0049960:CDS
TTAATCTTAGTATTGAATAG+GGG 0.556557 1_2:+3501010 None:intergenic
ATGCACATTCCAAATATACA+AGG 0.556789 1_2:-3499494 Msa0049960:CDS
ATGTGATGTTGTTTCCAACT+TGG 0.556806 1_2:+3500690 None:intergenic
ATAATCCTTCATATCCACAT+AGG 0.558179 1_2:+3500968 None:intergenic
CTTGTATAGGCTAACCAAGA+AGG 0.562555 1_2:+3499661 None:intergenic
ATTGGATTTATATCCCTATG+TGG 0.564756 1_2:-3500982 Msa0049960:CDS
ATGTGACAATCAGTATCCTC+AGG 0.567177 1_2:+3499610 None:intergenic
ATCCAAGACCTAACGAGAGA+AGG 0.569331 1_2:+3500931 None:intergenic
CAATATCAAACATGTGTGGA+AGG 0.576758 1_2:-3501472 Msa0049960:CDS
TGACAAGTTGGAAGAAGACA+TGG 0.578497 1_2:-3501088 Msa0049960:CDS
TAGATTCTTGAGATCTCCAA+TGG 0.579411 1_2:+3501215 None:intergenic
AATGGTAACACACTCAAACA+TGG 0.579891 1_2:+3501871 None:intergenic
CCATGTATATCCCCATTTCA+GGG 0.581875 1_2:-3500886 Msa0049960:CDS
GAGTCAGCTGAATCTGTGAT+CGG 0.587972 1_2:+3500758 None:intergenic
TCTTGAGATCTCCAATGGAA+TGG 0.589297 1_2:+3501220 None:intergenic
TTGGCAATCAATGATTCTAG+TGG 0.589492 1_2:-3499709 Msa0049960:CDS
ATTTATAGATCTTCATAGGG+AGG 0.591469 1_2:+3501154 None:intergenic
TAATCCTTCATATCCACATA+GGG 0.591756 1_2:+3500969 None:intergenic
AGCACTGTTTCAAATTCCTG+AGG 0.593819 1_2:-3499626 Msa0049960:CDS
TTTAATGATGAAGATTGGAA+GGG 0.593829 1_2:-3499454 Msa0049960:CDS
CAAGTTCACATGCAATAGCA+CGG 0.594388 1_2:+3501840 None:intergenic
AAGTTCACATGCAATAGCAC+GGG 0.602153 1_2:+3501841 None:intergenic
CAAGAAGGATAATTGCTACC+CGG 0.603629 1_2:+3499676 None:intergenic
AATGATACCTAAACTTTCCG+AGG 0.611688 1_2:+3501810 None:intergenic
AAGGATAATTGCTACCCGGA+AGG 0.619461 1_2:+3499680 None:intergenic
GATACTGATTGTCACATGAA+GGG 0.623818 1_2:-3499604 Msa0049960:CDS
GAATTGTCCAAGTTTGTCAG+AGG 0.625431 1_2:-3501247 Msa0049960:CDS
CTGAGATGGATTCACTGGCA+AGG 0.625665 1_2:-3501564 Msa0049960:CDS
TCTAGGATCTGGTGACAATG+TGG 0.638371 1_2:-3499419 Msa0049960:CDS
TCTTGGCAAGAGCATATCAC+AGG 0.646404 1_2:-3500593 Msa0049960:intron
GACAAGTTGGAAGAAGACAT+GGG 0.648326 1_2:-3501087 Msa0049960:CDS
CAATGAACTTCCCTGAAATG+GGG 0.648595 1_2:+3500876 None:intergenic
ACAGCAATATCAAACATGTG+TGG 0.657324 1_2:-3501476 Msa0049960:CDS
TGCACATTCCAAATATACAA+GGG 0.658651 1_2:-3499493 Msa0049960:CDS
CATGGTAGAGAATTCACGGA+TGG 0.660135 1_2:+3500904 None:intergenic
TGGGATGGGAAGTTGTCACC+TGG 0.664358 1_2:-3500626 Msa0049960:CDS
TGTGAACTTGAGCTGCACCT+CGG 0.671087 1_2:-3501827 Msa0049960:CDS
GTAGGGAACAGAAACTGTAG+AGG 0.672563 1_2:-3501721 Msa0049960:intron
ACATGTGTGGAAGGAAACCA+AGG 0.673903 1_2:-3501463 Msa0049960:intron
TAGGGAACAGAAACTGTAGA+GGG 0.676407 1_2:-3501720 Msa0049960:CDS
ACAAGTTGGAAGAAGACATG+GGG 0.701723 1_2:-3501086 Msa0049960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATCTTAGTATTGAATA+GGG + chr1_2:3500160-3500179 None:intergenic 15.0%
!!! TTTTAATCTTAGTATTGAAT+AGG + chr1_2:3500161-3500180 None:intergenic 15.0%
!!! ATACTAAGATTAAAAAGTAT+TGG - chr1_2:3500166-3500185 Msa0049960:intron 15.0%
!! TATTAGAATAACCAATAAAT+AGG + chr1_2:3500968-3500987 None:intergenic 15.0%
!! TTTAGAAAGAAAACAAATAA+TGG + chr1_2:3501269-3501288 None:intergenic 15.0%
!! CTTTCTAAATATCTATTTAT+TGG - chr1_2:3501280-3501299 Msa0049960:CDS 15.0%
!!! TTTTCTAGAACAAACAAAAA+AGG - chr1_2:3499377-3499396 Msa0049960:CDS 20.0%
!! GAAAAGAAATTATTATACCT+TGG + chr1_2:3499723-3499742 None:intergenic 20.0%
!!! TTGGTAATTTTGAAAAATCA+GGG + chr1_2:3499877-3499896 None:intergenic 20.0%
!!! TTTGGTAATTTTGAAAAATC+AGG + chr1_2:3499878-3499897 None:intergenic 20.0%
!!! ATAATAAGCTTTTCTAGATT+TGG + chr1_2:3499896-3499915 None:intergenic 20.0%
!! TCAATTTATAGATCTTCATA+GGG + chr1_2:3500018-3500037 None:intergenic 20.0%
!! TTCAATTTATAGATCTTCAT+AGG + chr1_2:3500019-3500038 None:intergenic 20.0%
!!! TTAATCTTAGTATTGAATAG+GGG + chr1_2:3500159-3500178 None:intergenic 20.0%
!! GATGTAACAAGTAATAATAT+GGG - chr1_2:3500328-3500347 Msa0049960:intron 20.0%
!! AAGAAAGAAAAAATTGCAAA+CGG + chr1_2:3500648-3500667 None:intergenic 20.0%
!! GAAATAAAGTAAAGTACATA+TGG + chr1_2:3500787-3500806 None:intergenic 20.0%
!! TAGTATATTAACTACATTCA+CGG - chr1_2:3500895-3500914 Msa0049960:CDS 20.0%
!! TCAAATAGTTAAGAATTATC+TGG + chr1_2:3500933-3500952 None:intergenic 20.0%
!! TATCATGGAAATTCATATAA+AGG + chr1_2:3501098-3501117 None:intergenic 20.0%
!! TTATATGAATTTCCATGATA+TGG - chr1_2:3501098-3501117 Msa0049960:CDS 20.0%
!! TATATGAATTTCCATGATAT+GGG - chr1_2:3501099-3501118 Msa0049960:CDS 20.0%
!! AGAAATTAAAACAGTTTAAG+TGG + chr1_2:3501190-3501209 None:intergenic 20.0%
!! ATGTACAATCAACAATAATA+TGG + chr1_2:3501327-3501346 None:intergenic 20.0%
!!! ATTAAGTACTGATTCTTTCA+AGG - chr1_2:3499505-3499524 Msa0049960:CDS 25.0%
! ATTTCCCTGATAAAATTCAT+CGG + chr1_2:3499648-3499667 None:intergenic 25.0%
! AAAAGAAAAATTAGAGAGGT+GGG + chr1_2:3499778-3499797 None:intergenic 25.0%
! GTTCAAAAGAAAAATTAGAG+AGG + chr1_2:3499782-3499801 None:intergenic 25.0%
!!! TGGTAATTTTGAAAAATCAG+GGG + chr1_2:3499876-3499895 None:intergenic 25.0%
! TCTACTTCTATTGAATTTGA+AGG - chr1_2:3499970-3499989 Msa0049960:intron 25.0%
!! ATTATTACTTGTTACATCCA+AGG + chr1_2:3500326-3500345 None:intergenic 25.0%
! GGATGTAACAAGTAATAATA+TGG - chr1_2:3500327-3500346 Msa0049960:intron 25.0%
!!! AAACACTTCTAAGTTTTGAA+AGG + chr1_2:3500378-3500397 None:intergenic 25.0%
!!! TTCAAAACTTAGAAGTGTTT+TGG - chr1_2:3500378-3500397 Msa0049960:intron 25.0%
!! TGATGTTAATTTTACCAAGT+TGG - chr1_2:3500462-3500481 Msa0049960:intron 25.0%
! AGAAAGAAAAAATTGCAAAC+GGG + chr1_2:3500647-3500666 None:intergenic 25.0%
! AGCAAAAGTTCTTAAAGATA+TGG - chr1_2:3500671-3500690 Msa0049960:CDS 25.0%
! TAAAGATATGGATTCATTCT+TGG - chr1_2:3500683-3500702 Msa0049960:CDS 25.0%
! TAACGACAAAACCTATTTAT+TGG - chr1_2:3500954-3500973 Msa0049960:CDS 25.0%
! AATATGCTCTACAACTATAA+TGG - chr1_2:3500984-3501003 Msa0049960:CDS 25.0%
! TTGCATAAACCTTTATATGT+AGG - chr1_2:3501122-3501141 Msa0049960:CDS 25.0%
! TTTAATGATGAAGATTGGAA+GGG - chr1_2:3501712-3501731 Msa0049960:CDS 25.0%
AAAATGAACAGAGAAGAGTA+AGG + chr1_2:3499408-3499427 None:intergenic 30.0%
AGTACTTAATCGTAATCTAC+TGG + chr1_2:3499495-3499514 None:intergenic 30.0%
! ATACCCGATGAATTTTATCA+GGG - chr1_2:3499641-3499660 Msa0049960:CDS 30.0%
TTTCCCTGATAAAATTCATC+GGG + chr1_2:3499647-3499666 None:intergenic 30.0%
CAAAAGAAAAATTAGAGAGG+TGG + chr1_2:3499779-3499798 None:intergenic 30.0%
ATATATCTTCTTGCAGTTGT+TGG - chr1_2:3499802-3499821 Msa0049960:intron 30.0%
ATTTATAGATCTTCATAGGG+AGG + chr1_2:3500015-3500034 None:intergenic 30.0%
TTGAAAACTCTTGTACTTTC+TGG - chr1_2:3500043-3500062 Msa0049960:intron 30.0%
TTGTACAAAGATTGACAAGT+TGG - chr1_2:3500066-3500085 Msa0049960:intron 30.0%
ATTGGATTTATATCCCTATG+TGG - chr1_2:3500184-3500203 Msa0049960:intron 30.0%
TAATCCTTCATATCCACATA+GGG + chr1_2:3500200-3500219 None:intergenic 30.0%
ATAATCCTTCATATCCACAT+AGG + chr1_2:3500201-3500220 None:intergenic 30.0%
TATACATGGTAGAGAATTCA+CGG + chr1_2:3500269-3500288 None:intergenic 30.0%
!! TCATGTAAGACTCTAAAATG+GGG + chr1_2:3501016-3501035 None:intergenic 30.0%
!! GTCATGTAAGACTCTAAAAT+GGG + chr1_2:3501017-3501036 None:intergenic 30.0%
! TGTCATGTAAGACTCTAAAA+TGG + chr1_2:3501018-3501037 None:intergenic 30.0%
ACTATGATGCCTACATATAA+AGG + chr1_2:3501134-3501153 None:intergenic 30.0%
ATGCACATTCCAAATATACA+AGG - chr1_2:3501672-3501691 Msa0049960:CDS 30.0%
TGCACATTCCAAATATACAA+GGG - chr1_2:3501673-3501692 Msa0049960:CDS 30.0%
TGTCCTTTAATGATGAAGAT+TGG - chr1_2:3501707-3501726 Msa0049960:CDS 30.0%
CTTCCAATCTTCATCATTAA+AGG + chr1_2:3501713-3501732 None:intergenic 30.0%
CTTTAATGATGAAGATTGGA+AGG - chr1_2:3501711-3501730 Msa0049960:CDS 30.0%
AAGGGTTTAACATCAAATCT+AGG - chr1_2:3501730-3501749 Msa0049960:intron 30.0%
! TTAACATCAAATCTAGGATC+TGG - chr1_2:3501736-3501755 Msa0049960:intron 30.0%
! TGGAGATTTTTGTAGCATTT+AGG - chr1_2:3501767-3501786 Msa0049960:intron 30.0%
ACTGCTGTCTATCTAATATA+TGG - chr1_2:3501811-3501830 Msa0049960:CDS 30.0%
AATGATACCTAAACTTTCCG+AGG + chr1_2:3499359-3499378 None:intergenic 35.0%
! TTGTTTTCCTTCACATGTGT+AGG - chr1_2:3499427-3499446 Msa0049960:CDS 35.0%
! TGTTTTCCTTCACATGTGTA+GGG - chr1_2:3499428-3499447 Msa0049960:CDS 35.0%
ATCTTTCCAAAGAACTGAGA+TGG - chr1_2:3499588-3499607 Msa0049960:CDS 35.0%
! CATACCCGATGAATTTTATC+AGG - chr1_2:3499640-3499659 Msa0049960:CDS 35.0%
ACAGCAATATCAAACATGTG+TGG - chr1_2:3499690-3499709 Msa0049960:CDS 35.0%
CAATATCAAACATGTGTGGA+AGG - chr1_2:3499694-3499713 Msa0049960:CDS 35.0%
TAGATTCTTGAGATCTCCAA+TGG + chr1_2:3499954-3499973 None:intergenic 35.0%
! TTTTGCAATCAGTGTTGTCA+AGG + chr1_2:3500116-3500135 None:intergenic 35.0%
ATATCCCTATGTGGATATGA+AGG - chr1_2:3500193-3500212 Msa0049960:intron 35.0%
! ATGTTTTTCCTTCTCTCGTT+AGG - chr1_2:3500227-3500246 Msa0049960:intron 35.0%
ACAATGAACTTCCCTGAAAT+GGG + chr1_2:3500294-3500313 None:intergenic 35.0%
! TTCATTGTCTCTTGTTTCCT+TGG - chr1_2:3500306-3500325 Msa0049960:intron 35.0%
TTTGAAAGGTTGCTAAGCAT+TGG + chr1_2:3500364-3500383 None:intergenic 35.0%
!! ATGTGATGTTGTTTCCAACT+TGG + chr1_2:3500479-3500498 None:intergenic 35.0%
AGTAAAAGAGAGAATTGTGC+AGG + chr1_2:3500601-3500620 None:intergenic 35.0%
ATGCTCTACAACTATAATGG+AGG - chr1_2:3500987-3501006 Msa0049960:CDS 35.0%
TAAGCATATGCTCATGATAC+AGG - chr1_2:3501432-3501451 Msa0049960:intron 35.0%
AAGCATATGCTCATGATACA+GGG - chr1_2:3501433-3501452 Msa0049960:intron 35.0%
TTGGCAATCAATGATTCTAG+TGG - chr1_2:3501457-3501476 Msa0049960:intron 35.0%
TGAAGTTCCTTCACTTGTAT+AGG + chr1_2:3501521-3501540 None:intergenic 35.0%
! GATACTGATTGTCACATGAA+GGG - chr1_2:3501562-3501581 Msa0049960:CDS 35.0%
TTCATCAACGTCTGAAAATG+TGG - chr1_2:3501606-3501625 Msa0049960:CDS 35.0%
TAGGCATGAATTGACTGTTA+AGG - chr1_2:3501786-3501805 Msa0049960:intron 35.0%
CAATTTCCATAGCAACTGAA+TGG + chr1_2:3501837-3501856 None:intergenic 35.0%
AATAGCACGGGTCATGATAA+TGG + chr1_2:3499316-3499335 None:intergenic 40.0%
AAGTTCACATGCAATAGCAC+GGG + chr1_2:3499328-3499347 None:intergenic 40.0%
CAAGTTCACATGCAATAGCA+CGG + chr1_2:3499329-3499348 None:intergenic 40.0%
TAGGGAACAGAAACTGTAGA+GGG - chr1_2:3499446-3499465 Msa0049960:CDS 40.0%
AACAGAAACTGTAGAGGGAT+TGG - chr1_2:3499451-3499470 Msa0049960:CDS 40.0%
!!! TGTAGAGGGATTGGTTTTGA+AGG - chr1_2:3499460-3499479 Msa0049960:CDS 40.0%
GGAAAGATACCGATAATCTC+CGG + chr1_2:3499576-3499595 None:intergenic 40.0%
GTGAATCCATCTCAGTTCTT+TGG + chr1_2:3499597-3499616 None:intergenic 40.0%
! AAGAACTGAGATGGATTCAC+TGG - chr1_2:3499597-3499616 Msa0049960:CDS 40.0%
TTCATCGGGTATGTAGTTGA+AGG + chr1_2:3499633-3499652 None:intergenic 40.0%
GAATTGTCCAAGTTTGTCAG+AGG - chr1_2:3499919-3499938 Msa0049960:intron 40.0%
TCTTGAGATCTCCAATGGAA+TGG + chr1_2:3499949-3499968 None:intergenic 40.0%
! TGACAAGTTGGAAGAAGACA+TGG - chr1_2:3500078-3500097 Msa0049960:intron 40.0%
! GACAAGTTGGAAGAAGACAT+GGG - chr1_2:3500079-3500098 Msa0049960:intron 40.0%
! ACAAGTTGGAAGAAGACATG+GGG - chr1_2:3500080-3500099 Msa0049960:intron 40.0%
ACCATGTATATCCCCATTTC+AGG - chr1_2:3500279-3500298 Msa0049960:intron 40.0%
CCATGTATATCCCCATTTCA+GGG - chr1_2:3500280-3500299 Msa0049960:intron 40.0%
CAATGAACTTCCCTGAAATG+GGG + chr1_2:3500293-3500312 None:intergenic 40.0%
GACAATGAACTTCCCTGAAA+TGG + chr1_2:3500295-3500314 None:intergenic 40.0%
!! TCCTTGAGATCGCTTTTGAT+TGG - chr1_2:3500520-3500539 Msa0049960:intron 40.0%
!! CCTTGAGATCGCTTTTGATT+GGG - chr1_2:3500521-3500540 Msa0049960:intron 40.0%
!! AGATCGCTTTTGATTGGGAT+GGG - chr1_2:3500526-3500545 Msa0049960:intron 40.0%
ACTACATTCACGGTAGAACT+AGG - chr1_2:3500905-3500924 Msa0049960:CDS 40.0%
GGTTTATGCAACCCATATCA+TGG + chr1_2:3501113-3501132 None:intergenic 40.0%
TATGCTCATGATACAGGGAT+TGG - chr1_2:3501438-3501457 Msa0049960:intron 40.0%
! TTCTAGTGGTTTTTGCCTTC+CGG - chr1_2:3501471-3501490 Msa0049960:CDS 40.0%
CAAGAAGGATAATTGCTACC+CGG + chr1_2:3501493-3501512 None:intergenic 40.0%
CTTGTATAGGCTAACCAAGA+AGG + chr1_2:3501508-3501527 None:intergenic 40.0%
!! TGGTTAGCCTATACAAGTGA+AGG - chr1_2:3501511-3501530 Msa0049960:CDS 40.0%
AGCACTGTTTCAAATTCCTG+AGG - chr1_2:3501540-3501559 Msa0049960:CDS 40.0%
ATGTGACAATCAGTATCCTC+AGG + chr1_2:3501559-3501578 None:intergenic 40.0%
! GGATACTGATTGTCACATGA+AGG - chr1_2:3501561-3501580 Msa0049960:CDS 40.0%
CTGTGTCTCCCTTGTATATT+TGG + chr1_2:3501684-3501703 None:intergenic 40.0%
ATATGGCCATTCAGTTGCTA+TGG - chr1_2:3501828-3501847 Msa0049960:CDS 40.0%
TCTGTTCCCTACACATGTGA+AGG + chr1_2:3499437-3499456 None:intergenic 45.0%
GTAGGGAACAGAAACTGTAG+AGG - chr1_2:3499445-3499464 Msa0049960:CDS 45.0%
GATACCGATAATCTCCGGTT+AGG + chr1_2:3499571-3499590 None:intergenic 45.0%
ACATGTGTGGAAGGAAACCA+AGG - chr1_2:3499703-3499722 Msa0049960:CDS 45.0%
TGGTGTACCTCTGACAAACT+TGG + chr1_2:3499929-3499948 None:intergenic 45.0%
! TCAGAGGTACACCATTCCAT+TGG - chr1_2:3499935-3499954 Msa0049960:intron 45.0%
TTCCTTCTCTCGTTAGGTCT+TGG - chr1_2:3500233-3500252 Msa0049960:intron 45.0%
ATCCAAGACCTAACGAGAGA+AGG + chr1_2:3500238-3500257 None:intergenic 45.0%
CATGGTAGAGAATTCACGGA+TGG + chr1_2:3500265-3500284 None:intergenic 45.0%
CCCTGAAATGGGGATATACA+TGG + chr1_2:3500283-3500302 None:intergenic 45.0%
GAGTCAGCTGAATCTGTGAT+CGG + chr1_2:3500411-3500430 None:intergenic 45.0%
CCCAATCAAAAGCGATCTCA+AGG + chr1_2:3500524-3500543 None:intergenic 45.0%
!! GAGATCGCTTTTGATTGGGA+TGG - chr1_2:3500525-3500544 Msa0049960:intron 45.0%
! TCTTGGCAAGAGCATATCAC+AGG - chr1_2:3500573-3500592 Msa0049960:intron 45.0%
! TCTAGTGGTTTTTGCCTTCC+GGG - chr1_2:3501472-3501491 Msa0049960:CDS 45.0%
AAGGATAATTGCTACCCGGA+AGG + chr1_2:3501489-3501508 None:intergenic 45.0%
CGGGTAGCAATTATCCTTCT+TGG - chr1_2:3501491-3501510 Msa0049960:CDS 45.0%
! TCTAGGATCTGGTGACAATG+TGG - chr1_2:3501747-3501766 Msa0049960:intron 45.0%
TGTGAACTTGAGCTGCACCT+CGG - chr1_2:3499339-3499358 Msa0049960:CDS 50.0%
AGCTGCACCTCGGAAAGTTT+AGG - chr1_2:3499349-3499368 Msa0049960:CDS 50.0%
CTTGATCATGCCGTCCTAAC+CGG - chr1_2:3499554-3499573 Msa0049960:CDS 50.0%
CCGATAATCTCCGGTTAGGA+CGG + chr1_2:3499567-3499586 None:intergenic 50.0%
CCGTCCTAACCGGAGATTAT+CGG - chr1_2:3499564-3499583 Msa0049960:CDS 50.0%
! CTGAGATGGATTCACTGGCA+AGG - chr1_2:3499602-3499621 Msa0049960:CDS 50.0%
GGAAGAAGACATGGGGCAGA+TGG - chr1_2:3500087-3500106 Msa0049960:intron 55.0%
TGGGATGGGAAGTTGTCACC+TGG - chr1_2:3500540-3500559 Msa0049960:intron 55.0%
CACCTGGTCATCGACACTCT+TGG - chr1_2:3500556-3500575 Msa0049960:intron 55.0%
!! TGCCAAGAGTGTCGATGACC+AGG + chr1_2:3500561-3500580 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 3499297 3501891 3499297 ID=Msa0049960;Name=Msa0049960
chr1_2 mRNA 3499297 3501891 3499297 ID=Msa0049960-mRNA-1;Parent=Msa0049960;Name=Msa0049960-mRNA-1;_AED=0.17;_eAED=0.18;_QI=0|0|0|1|1|1|4|0|530
chr1_2 exon 3501790 3501891 3501790 ID=Msa0049960-mRNA-1:exon:901;Parent=Msa0049960-mRNA-1
chr1_2 exon 3501464 3501739 3501464 ID=Msa0049960-mRNA-1:exon:900;Parent=Msa0049960-mRNA-1
chr1_2 exon 3500594 3501370 3500594 ID=Msa0049960-mRNA-1:exon:899;Parent=Msa0049960-mRNA-1
chr1_2 exon 3499297 3499734 3499297 ID=Msa0049960-mRNA-1:exon:898;Parent=Msa0049960-mRNA-1
chr1_2 CDS 3501790 3501891 3501790 ID=Msa0049960-mRNA-1:cds;Parent=Msa0049960-mRNA-1
chr1_2 CDS 3501464 3501739 3501464 ID=Msa0049960-mRNA-1:cds;Parent=Msa0049960-mRNA-1
chr1_2 CDS 3500594 3501370 3500594 ID=Msa0049960-mRNA-1:cds;Parent=Msa0049960-mRNA-1
chr1_2 CDS 3499297 3499734 3499297 ID=Msa0049960-mRNA-1:cds;Parent=Msa0049960-mRNA-1
Gene Sequence

>Msa0049960

ATGTTTGAGTGTGTTACCATTATCATGACCCGTGCTATTGCATGTGAACTTGAGCTGCACCTCGGAAAGTTTAGGTATCATTTTCTAGAACAAACAAAAAAGGGAACAGAAACTGTAGAGGGATTGGTTTTGAAGGTGCAAAGAACCAGTAGATTACGATTAAGTACTGATTCTTTCAAGGAGATGAAAAAACTGAGACTTTTACAACTTGATCATGCCGTCCTAACCGGAGATTATCGGTATCTTTCCAAAGAACTGAGATGGATTCACTGGCAAGGATTTACCTTCAACTACATACCCGATGAATTTTATCAGGGAAATCTAGTTGTCATTGAAATAAAATACAGCAATATCAAACATGTGTGGAAGGAAACCAAGTTGTTGGATAAACTAACAATTCTCAATGTTAGTCATTCTAGATACTTGAAAAACACCCCTGATTTTTCAAAATTACCAAATCTAGAAAAGCTTATTATGAAGAATTGTCCAAGTTTGTCAGAGGTACACCATTCCATTGGAGATCTCAAGAATCTACTTCTATTGAATTTGAAGGACTGCACAAGTCTTTGTAACCTCCCTATGAAGATCTATAAATTGAAATCTTTGAAAACTCTTGTACTTTCTGGTTGTACAAAGATTGACAAGTTGGAAGAAGACATGGGGCAGATGGAATCCTTGACAACACTGATTGCAAAAGATACATCTGTAAAAGAAGTCCCCTATTCAATACTAAGATTAAAAAGTATTGGATTTATATCCCTATGTGGATATGAAGGATTATCACGTGATGTTTTTCCTTCTCTCGTTAGGTCTTGGATGACACCATCCGTGAATTCTCTACCATGTATATCCCCATTTCAGGGAAGTTCATTGTCTCTTGTTTCCTTGGATGTAACAAGTAATAATATGGGCTATCAATCACCAATGCTTAGCAACCTTTCAAAACTTAGAAGTGTTTTGGTTCAATGCCGATCACAGATTCAGCTGACTCAAGAATTAAGAAATTTTTTTGATGATCTATATGATGTTAATTTTACCAAGTTGGAAACAACATCACATGCATCACAAATTGTTGACAGTTCCTTGAGATCGCTTTTGATTGGGATGGGAAGTTGTCACCTGGTCATCGACACTCTTGGCAAGAGCATATCACAGGGATTGGCAATCAATGATTCTAGTGGTTTTTGCCTTCCGGGTAGCAATTATCCTTCTTGGTTAGCCTATACAAGTGAAGGAACTTCAGCACTGTTTCAAATTCCTGAGGATACTGATTGTCACATGAAGGGAATAATTTTATGCGTTGTTTATTCATCAACGTCTGAAAATGTGGCTGCTGAATGTCTTGCTAATGTCTTGATCATTAATTACACAAAATGCACATTCCAAATATACAAGGGAGACACAGTAATGTCCTTTAATGATGAAGATTGGAAGGGTTTAACATCAAATCTAGGATCTGGTGACAATGTGGAGATTTTTGTAGCATTTAGGCATGAATTGACTGTTAAGGAGACTGCTGTCTATCTAATATATGGCCATTCAGTTGCTATGGAAATTGAGTCAGCAATTAACAGAGATGAAGCTTTCGCCTGA
Protein sequence

>Msa0049960

MFECVTIIMTRAIACELELHLGKFRYHFLEQTKKGTETVEGLVLKVQRTSRLRLSTDSFKEMKKLRLLQLDHAVLTGDYRYLSKELRWIHWQGFTFNYIPDEFYQGNLVVIEIKYSNIKHVWKETKLLDKLTILNVSHSRYLKNTPDFSKLPNLEKLIMKNCPSLSEVHHSIGDLKNLLLLNLKDCTSLCNLPMKIYKLKSLKTLVLSGCTKIDKLEEDMGQMESLTTLIAKDTSVKEVPYSILRLKSIGFISLCGYEGLSRDVFPSLVRSWMTPSVNSLPCISPFQGSSLSLVSLDVTSNNMGYQSPMLSNLSKLRSVLVQCRSQIQLTQELRNFFDDLYDVNFTKLETTSHASQIVDSSLRSLLIGMGSCHLVIDTLGKSISQGLAINDSSGFCLPGSNYPSWLAYTSEGTSALFQIPEDTDCHMKGIILCVVYSSTSENVAAECLANVLIINYTKCTFQIYKGDTVMSFNDEDWKGLTSNLGSGDNVEIFVAFRHELTVKETAVYLIYGHSVAMEIESAINRDEAFA*