Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015750 | Msa0811080 | 0.872469 | 3.106214e-67 | -8.615850e-47 |
| Msa0016570 | Msa0811080 | 0.878877 | 1.967151e-69 | -8.615850e-47 |
| Msa0016580 | Msa0811080 | 0.867844 | 1.014311e-65 | -8.615850e-47 |
| Msa0026450 | Msa0811080 | 0.819029 | 1.438886e-52 | -8.615850e-47 |
| Msa0049960 | Msa0811080 | 0.800421 | 1.452919e-48 | -8.615850e-47 |
| Msa0064970 | Msa0811080 | 0.802269 | 6.077785e-49 | -8.615850e-47 |
| Msa0071500 | Msa0811080 | 0.812477 | 4.157353e-51 | -8.615850e-47 |
| Msa0102070 | Msa0811080 | 0.818334 | 2.069193e-52 | -8.615850e-47 |
| Msa0110270 | Msa0811080 | 0.861622 | 9.014526e-64 | -8.615850e-47 |
| Msa0111510 | Msa0811080 | 0.833710 | 4.561290e-56 | -8.615850e-47 |
| Msa0604350 | Msa0811080 | 0.821843 | 3.255059e-53 | -8.615850e-47 |
| Msa0612930 | Msa0811080 | 0.800477 | 1.415404e-48 | -8.615850e-47 |
| Msa0636170 | Msa0811080 | 0.834234 | 3.372759e-56 | -8.615850e-47 |
| Msa0639610 | Msa0811080 | 0.839628 | 1.414317e-57 | -8.615850e-47 |
| Msa0644140 | Msa0811080 | 0.804272 | 2.339102e-49 | -8.615850e-47 |
| Msa0668260 | Msa0811080 | 0.819916 | 9.034410e-53 | -8.615850e-47 |
| Msa0669870 | Msa0811080 | 0.817228 | 3.677593e-52 | -8.615850e-47 |
| Msa0672690 | Msa0811080 | 0.802121 | 6.520866e-49 | -8.615850e-47 |
| Msa0678930 | Msa0811080 | 0.856424 | 3.248265e-62 | -8.615850e-47 |
| Msa0688270 | Msa0811080 | 0.817475 | 3.234837e-52 | -8.615850e-47 |
| Msa0694370 | Msa0811080 | 0.830350 | 3.085392e-55 | -8.615850e-47 |
| Msa0697060 | Msa0811080 | 0.826689 | 2.363432e-54 | -8.615850e-47 |
| Msa0726140 | Msa0811080 | 0.868975 | 4.378078e-66 | -8.615850e-47 |
| Msa0729800 | Msa0811080 | 0.859746 | 3.340989e-63 | -8.615850e-47 |
| Msa0733290 | Msa0811080 | 0.835307 | 1.810644e-56 | -8.615850e-47 |
| Msa0736000 | Msa0811080 | 0.845086 | 5.055517e-59 | -8.615850e-47 |
| Msa0736200 | Msa0811080 | 0.812863 | 3.422840e-51 | -8.615850e-47 |
| Msa0741570 | Msa0811080 | 0.806199 | 9.236736e-50 | -8.615850e-47 |
| Msa0741990 | Msa0811080 | 0.844444 | 7.533160e-59 | -8.615850e-47 |
| Msa0743810 | Msa0811080 | 0.863535 | 2.322909e-64 | -8.615850e-47 |
| Msa0745060 | Msa0811080 | 0.864649 | 1.044711e-64 | -8.615850e-47 |
| Msa0745610 | Msa0811080 | 0.813480 | 2.505342e-51 | -8.615850e-47 |
| Msa0759410 | Msa0811080 | 0.810463 | 1.138222e-50 | -8.615850e-47 |
| Msa0762360 | Msa0811080 | 0.805530 | 1.277133e-49 | -8.615850e-47 |
| Msa0764960 | Msa0811080 | 0.826068 | 3.323118e-54 | -8.615850e-47 |
| Msa0766630 | Msa0811080 | 0.855477 | 6.147611e-62 | -8.615850e-47 |
| Msa0767720 | Msa0811080 | 0.862498 | 4.856167e-64 | -8.615850e-47 |
| Msa0768310 | Msa0811080 | 0.802493 | 5.465215e-49 | -8.615850e-47 |
| Msa0777790 | Msa0811080 | 0.824357 | 8.434512e-54 | -8.615850e-47 |
| Msa0777850 | Msa0811080 | 0.808356 | 3.223685e-50 | -8.615850e-47 |
| Msa0783160 | Msa0811080 | 0.844832 | 5.919707e-59 | -8.615850e-47 |
| Msa0787600 | Msa0811080 | 0.822127 | 2.797540e-53 | -8.615850e-47 |
| Msa0789250 | Msa0811080 | 0.845333 | 4.334551e-59 | -8.615850e-47 |
| Msa0808010 | Msa0811080 | 0.811102 | 8.280786e-51 | -8.615850e-47 |
| Msa0808020 | Msa0811080 | 0.806299 | 8.798401e-50 | -8.615850e-47 |
| Msa0811080 | Msa0811270 | 0.838747 | 2.392607e-57 | -8.615850e-47 |
| Msa0811080 | Msa0825860 | 0.855204 | 7.381236e-62 | -8.615850e-47 |
| Msa0811080 | Msa0826750 | 0.830705 | 2.525794e-55 | -8.615850e-47 |
| Msa0811080 | Msa0846330 | 0.844983 | 5.390887e-59 | -8.615850e-47 |
| Msa0811080 | Msa0846350 | 0.870666 | 1.228471e-66 | -8.615850e-47 |
| Msa0811080 | Msa0848060 | 0.831782 | 1.373373e-55 | -8.615850e-47 |
| Msa0811080 | Msa0848960 | 0.807916 | 4.000308e-50 | -8.615850e-47 |
| Msa0811080 | Msa0849360 | 0.808884 | 2.486477e-50 | -8.615850e-47 |
| Msa0811080 | Msa0865320 | 0.847938 | 8.424054e-60 | -8.615850e-47 |
| Msa0811080 | Msa0885190 | 0.817914 | 2.574742e-52 | -8.615850e-47 |
| Msa0811080 | Msa0885210 | 0.806907 | 6.549617e-50 | -8.615850e-47 |
| Msa0811080 | Msa0885280 | 0.830946 | 2.204864e-55 | -8.615850e-47 |
| Msa0811080 | Msa0885290 | 0.852956 | 3.283630e-61 | -8.615850e-47 |
| Msa0811080 | Msa0886740 | 0.800629 | 1.317801e-48 | -8.615850e-47 |
| Msa0811080 | Msa0886750 | 0.857394 | 1.682180e-62 | -8.615850e-47 |
| Msa0811080 | Msa0888370 | 0.823769 | 1.158643e-53 | -8.615850e-47 |
| Msa0811080 | Msa0896080 | 0.805843 | 1.097628e-49 | -8.615850e-47 |
| Msa0811080 | Msa0897880 | 0.806322 | 8.700210e-50 | -8.615850e-47 |
| Msa0811080 | Msa0898380 | 0.826309 | 2.911443e-54 | -8.615850e-47 |
| Msa0811080 | Msa0907070 | 0.810213 | 1.289102e-50 | -8.615850e-47 |
| Msa0811080 | Msa0907260 | 0.823787 | 1.147397e-53 | -8.615850e-47 |
| Msa0811080 | Msa0907690 | 0.802421 | 5.655025e-49 | -8.615850e-47 |
| Msa0811080 | Msa0922720 | 0.808458 | 3.067452e-50 | -8.615850e-47 |
| Msa0811080 | Msa0935640 | 0.838360 | 3.011355e-57 | -8.615850e-47 |
| Msa0811080 | Msa0935910 | 0.805003 | 1.646369e-49 | -8.615850e-47 |
| Msa0811080 | Msa0954020 | 0.804809 | 1.807260e-49 | -8.615850e-47 |
| Msa0811080 | Msa0954910 | 0.826513 | 2.603947e-54 | -8.615850e-47 |
| Msa0811080 | Msa0956270 | 0.828008 | 1.141416e-54 | -8.615850e-47 |
| Msa0811080 | Msa0957680 | 0.827184 | 1.800184e-54 | -8.615850e-47 |
| Msa0811080 | Msa0969260 | 0.838360 | 3.012179e-57 | -8.615850e-47 |
| Msa0811080 | Msa0969450 | 0.807782 | 4.273055e-50 | -8.615850e-47 |
| Msa0811080 | Msa0979410 | 0.808918 | 2.446104e-50 | -8.615850e-47 |
| Msa0811080 | Msa0981370 | 0.844706 | 6.401091e-59 | -8.615850e-47 |
| Msa0811080 | Msa0989060 | 0.846881 | 1.643984e-59 | -8.615850e-47 |
| Msa0811080 | Msa0991230 | 0.807998 | 3.843164e-50 | -8.615850e-47 |
| Msa0811080 | Msa1014540 | 0.808804 | 2.587293e-50 | -8.615850e-47 |
| Msa0811080 | Msa1016280 | 0.852159 | 5.540731e-61 | -8.615850e-47 |
| Msa0811080 | Msa1023050 | 0.816695 | 4.842744e-52 | -8.615850e-47 |
| Msa0811080 | Msa1023950 | 0.809372 | 1.954925e-50 | -8.615850e-47 |
| Msa0811080 | Msa1024240 | 0.830953 | 2.196317e-55 | -8.615850e-47 |
| Msa0811080 | Msa1024370 | 0.800287 | 1.547252e-48 | -8.615850e-47 |
| Msa0811080 | Msa1024450 | 0.807975 | 3.887531e-50 | -8.615850e-47 |
| Msa0811080 | Msa1025360 | 0.831856 | 1.316721e-55 | -8.615850e-47 |
| Msa0811080 | Msa1025370 | 0.816196 | 6.264005e-52 | -8.615850e-47 |
| Msa0811080 | Msa1030060 | 0.804933 | 1.703091e-49 | -8.615850e-47 |
| Msa0811080 | Msa1037200 | 0.800888 | 1.166450e-48 | -8.615850e-47 |
| Msa0811080 | Msa1044830 | 0.820060 | 8.373009e-53 | -8.615850e-47 |
| Msa0811080 | Msa1044840 | 0.834706 | 2.566931e-56 | -8.615850e-47 |
| Msa0811080 | Msa1047550 | 0.802911 | 4.481639e-49 | -8.615850e-47 |
| Msa0811080 | Msa1059750 | 0.803615 | 3.203169e-49 | -8.615850e-47 |
| Msa0811080 | Msa1062810 | 0.803241 | 3.828641e-49 | -8.615850e-47 |
| Msa0811080 | Msa1065570 | 0.802894 | 4.516659e-49 | -8.615850e-47 |
| Msa0811080 | Msa1077460 | 0.802005 | 6.887854e-49 | -8.615850e-47 |
| Msa0811080 | Msa1092990 | 0.857336 | 1.749847e-62 | -8.615850e-47 |
| Msa0811080 | Msa1096580 | 0.807842 | 4.147498e-50 | -8.615850e-47 |
| Msa0811080 | Msa1099970 | 0.805077 | 1.589051e-49 | -8.615850e-47 |
| Msa0811080 | Msa1100980 | 0.834817 | 2.406211e-56 | -8.615850e-47 |
| Msa0811080 | Msa1109440 | 0.830976 | 2.167725e-55 | -8.615850e-47 |
| Msa0811080 | Msa1114030 | 0.816386 | 5.681513e-52 | -8.615850e-47 |
| Msa0811080 | Msa1116260 | 0.814896 | 1.219719e-51 | -8.615850e-47 |
| Msa0811080 | Msa1117150 | 0.804316 | 2.290924e-49 | -8.615850e-47 |
| Msa0811080 | Msa1121200 | 0.834426 | 3.017895e-56 | -8.615850e-47 |
| Msa0811080 | Msa1121480 | 0.811390 | 7.172582e-51 | -8.615850e-47 |
| Msa0811080 | Msa1121490 | 0.816941 | 4.264599e-52 | -8.615850e-47 |
| Msa0811080 | Msa1135220 | 0.804927 | 1.707542e-49 | -8.615850e-47 |
| Msa0811080 | Msa1135740 | 0.823246 | 1.535581e-53 | -8.615850e-47 |
| Msa0811080 | Msa1136090 | 0.825762 | 3.927090e-54 | -8.615850e-47 |
| Msa0811080 | Msa1137690 | 0.810912 | 9.102581e-51 | -8.615850e-47 |
| Msa0811080 | Msa1146110 | 0.860885 | 1.512128e-63 | -8.615850e-47 |
| Msa0811080 | Msa1148020 | 0.822266 | 2.596644e-53 | -8.615850e-47 |
| Msa0811080 | Msa1160670 | 0.843402 | 1.432808e-58 | -8.615850e-47 |
| Msa0811080 | Msa1160690 | 0.804065 | 2.583212e-49 | -8.615850e-47 |
| Msa0811080 | Msa1164120 | 0.813317 | 2.720597e-51 | -8.615850e-47 |
| Msa0811080 | Msa1179770 | 0.809695 | 1.665920e-50 | -8.615850e-47 |
| Msa0811080 | Msa1187940 | 0.865945 | 4.085872e-65 | -8.615850e-47 |
| Msa0811080 | Msa1187950 | 0.865396 | 6.086382e-65 | -8.615850e-47 |
| Msa0811080 | Msa1192640 | 0.842211 | 2.970460e-58 | -8.615850e-47 |
| Msa0811080 | Msa1198400 | 0.801833 | 7.473263e-49 | -8.615850e-47 |
| Msa0811080 | Msa1246510 | 0.802090 | 6.615175e-49 | -8.615850e-47 |
| Msa0811080 | Msa1249490 | 0.808623 | 2.828072e-50 | -8.615850e-47 |
| Msa0811080 | Msa1251910 | 0.852249 | 5.226331e-61 | -8.615850e-47 |
| Msa0811080 | Msa1253000 | 0.836172 | 1.093419e-56 | -8.615850e-47 |
| Msa0811080 | Msa1260100 | 0.810314 | 1.225719e-50 | -8.615850e-47 |
| Msa0811080 | Msa1269670 | 0.859506 | 3.945718e-63 | -8.615850e-47 |
| Msa0811080 | Msa1270230 | 0.852843 | 3.538266e-61 | -8.615850e-47 |
| Msa0811080 | Msa1270240 | 0.833357 | 5.586859e-56 | -8.615850e-47 |
| Msa0811080 | Msa1270270 | 0.822438 | 2.369339e-53 | -8.615850e-47 |
| Msa0811080 | Msa1273230 | 0.800198 | 1.612667e-48 | -8.615850e-47 |
| Msa0811080 | Msa1283330 | 0.853502 | 2.290003e-61 | -8.615850e-47 |
| Msa0811080 | Msa1284680 | 0.816240 | 6.123118e-52 | -8.615850e-47 |
| Msa0811080 | Msa1285930 | 0.862790 | 3.947954e-64 | -8.615850e-47 |
| Msa0811080 | Msa1287800 | 0.830039 | 3.676283e-55 | -8.615850e-47 |
| Msa0811080 | Msa1287810 | 0.845400 | 4.158335e-59 | -8.615850e-47 |
| Msa0811080 | Msa1287820 | 0.802530 | 5.370860e-49 | -8.615850e-47 |
| Msa0811080 | Msa1289430 | 0.827006 | 1.985778e-54 | -8.615850e-47 |
| Msa0811080 | Msa1292570 | 0.805675 | 1.190327e-49 | -8.615850e-47 |
| Msa0811080 | Msa1297210 | 0.811787 | 5.878415e-51 | -8.615850e-47 |
| Msa0811080 | Msa1307890 | 0.816535 | 5.261125e-52 | -8.615850e-47 |
| Msa0811080 | Msa1310120 | 0.803986 | 2.682687e-49 | -8.615850e-47 |
| Msa0811080 | Msa1320300 | 0.827187 | 1.796784e-54 | -8.615850e-47 |
| Msa0811080 | Msa1340590 | 0.835387 | 1.728920e-56 | -8.615850e-47 |
| Msa0811080 | Msa1372980 | 0.800707 | 1.269990e-48 | -8.615850e-47 |
| Msa0811080 | Msa1373030 | 0.804042 | 2.611726e-49 | -8.615850e-47 |
| Msa0811080 | Msa1382690 | 0.834542 | 2.822870e-56 | -8.615850e-47 |
| Msa0811080 | Msa1382700 | 0.803805 | 2.925204e-49 | -8.615850e-47 |
| Msa0811080 | Msa1388930 | 0.808584 | 2.881924e-50 | -8.615850e-47 |
| Msa0811080 | Msa1397580 | 0.831528 | 1.585900e-55 | -8.615850e-47 |
| Msa0811080 | Msa1402790 | 0.808157 | 3.555993e-50 | -8.615850e-47 |
| Msa0811080 | Msa1404000 | 0.844269 | 8.391161e-59 | -8.615850e-47 |
| Msa0811080 | Msa1408780 | 0.818645 | 1.759774e-52 | -8.615850e-47 |
| Msa0811080 | Msa1415310 | 0.809910 | 1.497725e-50 | -8.615850e-47 |
| Msa0811080 | Msa1422180 | 0.851111 | 1.098037e-60 | -8.615850e-47 |
| Msa0811080 | Msa1433120 | 0.853531 | 2.247345e-61 | -8.615850e-47 |
| Msa0811080 | Msa1438250 | 0.812452 | 4.208803e-51 | -8.615850e-47 |
| Msa0811080 | Msa1451570 | 0.818868 | 1.565984e-52 | -8.615850e-47 |
| Msa0811080 | Msa1453720 | 0.804609 | 1.990100e-49 | -8.615850e-47 |
| Msa0131770 | Msa0811080 | 0.813309 | 2.732334e-51 | -8.615850e-47 |
| Msa0142220 | Msa0811080 | 0.912421 | 1.986364e-83 | -8.615850e-47 |
| Msa0145260 | Msa0811080 | 0.811224 | 7.792441e-51 | -8.615850e-47 |
| Msa0153910 | Msa0811080 | 0.839768 | 1.300637e-57 | -8.615850e-47 |
| Msa0159720 | Msa0811080 | 0.809525 | 1.812467e-50 | -8.615850e-47 |
| Msa0165190 | Msa0811080 | 0.802390 | 5.739984e-49 | -8.615850e-47 |
| Msa0192970 | Msa0811080 | 0.804372 | 2.229805e-49 | -8.615850e-47 |
| Msa0200000 | Msa0811080 | 0.808575 | 2.895166e-50 | -8.615850e-47 |
| Msa0214300 | Msa0811080 | 0.813831 | 2.097017e-51 | -8.615850e-47 |
| Msa0214370 | Msa0811080 | 0.829746 | 4.332644e-55 | -8.615850e-47 |
| Msa0214380 | Msa0811080 | 0.826018 | 3.414984e-54 | -8.615850e-47 |
| Msa0227480 | Msa0811080 | 0.845975 | 2.902846e-59 | -8.615850e-47 |
| Msa0229590 | Msa0811080 | 0.800523 | 1.385143e-48 | -8.615850e-47 |
| Msa0232850 | Msa0811080 | 0.837736 | 4.359372e-57 | -8.615850e-47 |
| Msa0233080 | Msa0811080 | 0.812757 | 3.610012e-51 | -8.615850e-47 |
| Msa0233300 | Msa0811080 | 0.816596 | 5.098237e-52 | -8.615850e-47 |
| Msa0235140 | Msa0811080 | 0.825762 | 3.927278e-54 | -8.615850e-47 |
| Msa0371730 | Msa0811080 | 0.803476 | 3.422890e-49 | -8.615850e-47 |
| Msa0378360 | Msa0811080 | 0.827383 | 1.612947e-54 | -8.615850e-47 |
| Msa0380190 | Msa0811080 | 0.810793 | 9.662008e-51 | -8.615850e-47 |
| Msa0384800 | Msa0811080 | 0.848395 | 6.300803e-60 | -8.615850e-47 |
| Msa0406120 | Msa0811080 | 0.815031 | 1.138269e-51 | -8.615850e-47 |
| Msa0407750 | Msa0811080 | 0.847772 | 9.359151e-60 | -8.615850e-47 |
| Msa0414410 | Msa0811080 | 0.810295 | 1.237764e-50 | -8.615850e-47 |
| Msa0414420 | Msa0811080 | 0.834233 | 3.373516e-56 | -8.615850e-47 |
| Msa0419980 | Msa0811080 | 0.800859 | 1.182638e-48 | -8.615850e-47 |
| Msa0423020 | Msa0811080 | 0.808228 | 3.434013e-50 | -8.615850e-47 |
| Msa0427710 | Msa0811080 | 0.831610 | 1.513769e-55 | -8.615850e-47 |
| Msa0436800 | Msa0811080 | 0.865496 | 5.663195e-65 | -8.615850e-47 |
| Msa0438620 | Msa0811080 | 0.828283 | 9.798885e-55 | -8.615850e-47 |
| Msa0444130 | Msa0811080 | 0.833698 | 4.592264e-56 | -8.615850e-47 |
| Msa0450000 | Msa0811080 | 0.807883 | 4.066806e-50 | -8.615850e-47 |
| Msa0452620 | Msa0811080 | 0.810268 | 1.254440e-50 | -8.615850e-47 |
| Msa0452900 | Msa0811080 | 0.850152 | 2.041982e-60 | -8.615850e-47 |
| Msa0453120 | Msa0811080 | 0.833438 | 5.332971e-56 | -8.615850e-47 |
| Msa0458090 | Msa0811080 | 0.812646 | 3.818107e-51 | -8.615850e-47 |
| Msa0459170 | Msa0811080 | 0.802588 | 5.223936e-49 | -8.615850e-47 |
| Msa0479340 | Msa0811080 | 0.801946 | 7.083130e-49 | -8.615850e-47 |
| Msa0251320 | Msa0811080 | 0.808550 | 2.931336e-50 | -8.615850e-47 |
| Msa0256440 | Msa0811080 | 0.803500 | 3.385016e-49 | -8.615850e-47 |
| Msa0267000 | Msa0811080 | 0.823014 | 1.740031e-53 | -8.615850e-47 |
| Msa0267010 | Msa0811080 | 0.837802 | 4.192466e-57 | -8.615850e-47 |
| Msa0270520 | Msa0811080 | 0.838248 | 3.219750e-57 | -8.615850e-47 |
| Msa0273100 | Msa0811080 | 0.856074 | 4.114407e-62 | -8.615850e-47 |
| Msa0290870 | Msa0811080 | 0.815573 | 8.627889e-52 | -8.615850e-47 |
| Msa0294030 | Msa0811080 | 0.801179 | 1.017412e-48 | -8.615850e-47 |
| Msa0304170 | Msa0811080 | 0.852434 | 4.627443e-61 | -8.615850e-47 |
| Msa0306460 | Msa0811080 | 0.891303 | 4.490826e-74 | -8.615850e-47 |
| Msa0309020 | Msa0811080 | 0.820460 | 6.779438e-53 | -8.615850e-47 |
| Msa0313760 | Msa0811080 | 0.802437 | 5.613418e-49 | -8.615850e-47 |
| Msa0326200 | Msa0811080 | 0.800161 | 1.641096e-48 | -8.615850e-47 |
| Msa0342240 | Msa0811080 | 0.831867 | 1.308346e-55 | -8.615850e-47 |
| Msa0353190 | Msa0811080 | 0.806860 | 6.701294e-50 | -8.615850e-47 |
| Msa0360510 | Msa0811080 | 0.834473 | 2.936330e-56 | -8.615850e-47 |
| Msa0362810 | Msa0811080 | 0.805581 | 1.245526e-49 | -8.615850e-47 |
| Msa0363300 | Msa0811080 | 0.815991 | 6.961992e-52 | -8.615850e-47 |
| Msa0485370 | Msa0811080 | 0.846604 | 1.957132e-59 | -8.615850e-47 |
| Msa0486950 | Msa0811080 | 0.818873 | 1.561293e-52 | -8.615850e-47 |
| Msa0491590 | Msa0811080 | 0.820130 | 8.069572e-53 | -8.615850e-47 |
| Msa0502270 | Msa0811080 | 0.819927 | 8.980984e-53 | -8.615850e-47 |
| Msa0502760 | Msa0811080 | 0.811049 | 8.504417e-51 | -8.615850e-47 |
| Msa0506270 | Msa0811080 | 0.818852 | 1.578927e-52 | -8.615850e-47 |
| Msa0518540 | Msa0811080 | 0.821089 | 4.859969e-53 | -8.615850e-47 |
| Msa0537500 | Msa0811080 | 0.835134 | 2.002541e-56 | -8.615850e-47 |
| Msa0544240 | Msa0811080 | 0.806204 | 9.215131e-50 | -8.615850e-47 |
| Msa0564890 | Msa0811080 | 0.833100 | 6.474810e-56 | -8.615850e-47 |
| Msa0589780 | Msa0811080 | 0.819617 | 1.057235e-52 | -8.615850e-47 |
| Msa0600700 | Msa0811080 | 0.834294 | 3.257686e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 24 sgRNAs with CRISPR-Local
Find 52 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATAGTATCAATCTTATAT+AGG | 0.366162 | 5_3:+40195210 | Msa0811080:five_prime_UTR |
| CCACTTGATTCCCTTGCGTT+GGG | 0.409880 | 5_3:-40195721 | None:intergenic |
| TCAGTCTCAGTTTGCACGGC+TGG | 0.418620 | 5_3:+40195246 | Msa0811080:five_prime_UTR |
| CCCACTTGATTCCCTTGCGT+TGG | 0.431316 | 5_3:-40195722 | None:intergenic |
| AGGAAGCAATAAATTTAAGC+TGG | 0.504728 | 5_3:+40195182 | Msa0811080:five_prime_UTR |
| CGAGATACAACAATCTCATC+GGG | 0.510114 | 5_3:+40195819 | Msa0811080:CDS |
| GAGATCGGAAAGTTCTTCTC+AGG | 0.511097 | 5_3:+40195669 | Msa0811080:CDS |
| CAGGAAAGTAAAACACAAGA+TGG | 0.533616 | 5_3:+40195688 | Msa0811080:CDS |
| GTTCCTCTGTTCCCAACGCA+AGG | 0.538012 | 5_3:+40195710 | Msa0811080:CDS |
| AGCAGCAACAAAAGTAGTGA+AGG | 0.542395 | 5_3:+40195156 | Msa0811080:five_prime_UTR |
| ATTGTGTTAGGATGGGAGAT+CGG | 0.543831 | 5_3:+40195654 | Msa0811080:intron |
| TCGAGATACAACAATCTCAT+CGG | 0.561426 | 5_3:+40195818 | Msa0811080:CDS |
| AACAAAAGTAGTGAAGGAAG+AGG | 0.570751 | 5_3:+40195162 | Msa0811080:five_prime_UTR |
| CAGCCGCGAGTGTTAAAAGT+GGG | 0.578565 | 5_3:+40195749 | Msa0811080:CDS |
| CCCAACGCAAGGGAATCAAG+TGG | 0.588631 | 5_3:+40195721 | Msa0811080:CDS |
| TTCCCTTGCGTTGGGAACAG+AGG | 0.594506 | 5_3:-40195713 | None:intergenic |
| CCAACGCAAGGGAATCAAGT+GGG | 0.597329 | 5_3:+40195722 | Msa0811080:CDS |
| GCAGTCAGTCTCAGTTTGCA+CGG | 0.601159 | 5_3:+40195242 | Msa0811080:five_prime_UTR |
| TTCCTCTGTTCCCAACGCAA+GGG | 0.617747 | 5_3:+40195711 | Msa0811080:CDS |
| CAACGCAAGGGAATCAAGTG+GGG | 0.622276 | 5_3:+40195723 | Msa0811080:CDS |
| GCCGCGAGTGTTAAAAGTGG+GGG | 0.633082 | 5_3:+40195751 | Msa0811080:CDS |
| TCAGCCGCGAGTGTTAAAAG+TGG | 0.638737 | 5_3:+40195748 | Msa0811080:CDS |
| AGCCGCGAGTGTTAAAAGTG+GGG | 0.663832 | 5_3:+40195750 | Msa0811080:CDS |
| AACGCAAGGGAATCAAGTGG+GGG | 0.669401 | 5_3:+40195724 | Msa0811080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATAGTATCAATCTTATAT+AGG | + | chr5_3:40195210-40195229 | Msa0811080:five_prime_UTR | 20.0% |
| !! | TATACAATAGAATACTTAAG+TGG | - | chr5_3:40195494-40195513 | None:intergenic | 20.0% |
| ! | TATTACATCTGTATAGTTAC+TGG | + | chr5_3:40195327-40195346 | Msa0811080:intron | 25.0% |
| ! | GAAACATGTATAGGTATAAT+TGG | - | chr5_3:40195582-40195601 | None:intergenic | 25.0% |
| AGGAAGCAATAAATTTAAGC+TGG | + | chr5_3:40195182-40195201 | Msa0811080:five_prime_UTR | 30.0% | |
| ! | ATATCATTAGTTTCCTAGCT+GGG | - | chr5_3:40195470-40195489 | None:intergenic | 30.0% |
| ! | AATATCATTAGTTTCCTAGC+TGG | - | chr5_3:40195471-40195490 | None:intergenic | 30.0% |
| ! | TCAATCGTGTCAAATTTTCT+TGG | + | chr5_3:40195532-40195551 | Msa0811080:intron | 30.0% |
| ! | CAATCGTGTCAAATTTTCTT+GGG | + | chr5_3:40195533-40195552 | Msa0811080:intron | 30.0% |
| GCATAGTATGAAACATGTAT+AGG | - | chr5_3:40195591-40195610 | None:intergenic | 30.0% | |
| !! | CGCATGATTTTAACATTTAC+TGG | - | chr5_3:40195629-40195648 | None:intergenic | 30.0% |
| ! | AAGAACTTGTGTTTTACTTG+CGG | - | chr5_3:40195782-40195801 | None:intergenic | 30.0% |
| AACAAAAGTAGTGAAGGAAG+AGG | + | chr5_3:40195162-40195181 | Msa0811080:five_prime_UTR | 35.0% | |
| TACATCTGTATAGTTACTGG+TGG | + | chr5_3:40195330-40195349 | Msa0811080:intron | 35.0% | |
| CTACCTAAGCTTCATCTATA+AGG | + | chr5_3:40195442-40195461 | Msa0811080:intron | 35.0% | |
| CAGGAAAGTAAAACACAAGA+TGG | + | chr5_3:40195688-40195707 | Msa0811080:CDS | 35.0% | |
| TCGAGATACAACAATCTCAT+CGG | + | chr5_3:40195818-40195837 | Msa0811080:CDS | 35.0% | |
| AGCAGCAACAAAAGTAGTGA+AGG | + | chr5_3:40195156-40195175 | Msa0811080:five_prime_UTR | 40.0% | |
| ! | TCTAAGATGCGCACCTAATT+TGG | + | chr5_3:40195355-40195374 | Msa0811080:intron | 40.0% |
| CTAAGATGCGCACCTAATTT+GGG | + | chr5_3:40195356-40195375 | Msa0811080:intron | 40.0% | |
| TAAGATGCGCACCTAATTTG+GGG | + | chr5_3:40195357-40195376 | Msa0811080:intron | 40.0% | |
| AAGTTTCCAGTGGCCAATAA+GGG | - | chr5_3:40195396-40195415 | None:intergenic | 40.0% | |
| GTGCCTTATAGATGAAGCTT+AGG | - | chr5_3:40195448-40195467 | None:intergenic | 40.0% | |
| TCATGCGCTTGAATTGTGTT+AGG | + | chr5_3:40195642-40195661 | Msa0811080:intron | 40.0% | |
| CGCTTGAATTGTGTTAGGAT+GGG | + | chr5_3:40195647-40195666 | Msa0811080:intron | 40.0% | |
| ATTGTGTTAGGATGGGAGAT+CGG | + | chr5_3:40195654-40195673 | Msa0811080:intron | 40.0% | |
| CGAGATACAACAATCTCATC+GGG | + | chr5_3:40195819-40195838 | Msa0811080:CDS | 40.0% | |
| ! | TGTACGCTTGCTACCCTTAT+TGG | + | chr5_3:40195380-40195399 | Msa0811080:intron | 45.0% |
| CAAGTTTCCAGTGGCCAATA+AGG | - | chr5_3:40195397-40195416 | None:intergenic | 45.0% | |
| TTCCTCTGACAAGTTTCCAG+TGG | - | chr5_3:40195406-40195425 | None:intergenic | 45.0% | |
| GCGCTTGAATTGTGTTAGGA+TGG | + | chr5_3:40195646-40195665 | Msa0811080:intron | 45.0% | |
| GAGATCGGAAAGTTCTTCTC+AGG | + | chr5_3:40195669-40195688 | Msa0811080:CDS | 45.0% | |
| GCAGTCAGTCTCAGTTTGCA+CGG | + | chr5_3:40195242-40195261 | Msa0811080:five_prime_UTR | 50.0% | |
| GCAAGCGTACACCCCAAATT+AGG | - | chr5_3:40195371-40195390 | None:intergenic | 50.0% | |
| TTGCTACCCTTATTGGCCAC+TGG | + | chr5_3:40195387-40195406 | Msa0811080:intron | 50.0% | |
| ! | CATCTATAAGGCACCCAGCT+AGG | + | chr5_3:40195454-40195473 | Msa0811080:intron | 50.0% |
| TTCCTCTGTTCCCAACGCAA+GGG | + | chr5_3:40195711-40195730 | Msa0811080:CDS | 50.0% | |
| CCACTTGATTCCCTTGCGTT+GGG | - | chr5_3:40195724-40195743 | None:intergenic | 50.0% | |
| CCAACGCAAGGGAATCAAGT+GGG | + | chr5_3:40195722-40195741 | Msa0811080:CDS | 50.0% | |
| CAACGCAAGGGAATCAAGTG+GGG | + | chr5_3:40195723-40195742 | Msa0811080:CDS | 50.0% | |
| AACGCAAGGGAATCAAGTGG+GGG | + | chr5_3:40195724-40195743 | Msa0811080:CDS | 50.0% | |
| TCAGCCGCGAGTGTTAAAAG+TGG | + | chr5_3:40195748-40195767 | Msa0811080:CDS | 50.0% | |
| CAGCCGCGAGTGTTAAAAGT+GGG | + | chr5_3:40195749-40195768 | Msa0811080:CDS | 50.0% | |
| AGCCGCGAGTGTTAAAAGTG+GGG | + | chr5_3:40195750-40195769 | Msa0811080:CDS | 50.0% | |
| !! | TCCCCCACTTTTAACACTCG+CGG | - | chr5_3:40195755-40195774 | None:intergenic | 50.0% |
| TCAGTCTCAGTTTGCACGGC+TGG | + | chr5_3:40195246-40195265 | Msa0811080:five_prime_UTR | 55.0% | |
| GGCCACTGGAAACTTGTCAG+AGG | + | chr5_3:40195401-40195420 | Msa0811080:intron | 55.0% | |
| GTTCCTCTGTTCCCAACGCA+AGG | + | chr5_3:40195710-40195729 | Msa0811080:CDS | 55.0% | |
| TTCCCTTGCGTTGGGAACAG+AGG | - | chr5_3:40195716-40195735 | None:intergenic | 55.0% | |
| CCCAACGCAAGGGAATCAAG+TGG | + | chr5_3:40195721-40195740 | Msa0811080:CDS | 55.0% | |
| CCCACTTGATTCCCTTGCGT+TGG | - | chr5_3:40195725-40195744 | None:intergenic | 55.0% | |
| GCCGCGAGTGTTAAAAGTGG+GGG | + | chr5_3:40195751-40195770 | Msa0811080:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 40195150 | 40195844 | 40195150 | ID=Msa0811080;Name=Msa0811080 |
| chr5_3 | mRNA | 40195150 | 40195844 | 40195150 | ID=Msa0811080-mRNA-1;Parent=Msa0811080;Name=Msa0811080-mRNA-1;_AED=0.00;_eAED=0.00;_QI=139|1|0.5|1|0|0.5|2|0|64 |
| chr5_3 | exon | 40195150 | 40195299 | 40195150 | ID=Msa0811080-mRNA-1:exon:12278;Parent=Msa0811080-mRNA-1 |
| chr5_3 | exon | 40195664 | 40195844 | 40195664 | ID=Msa0811080-mRNA-1:exon:12279;Parent=Msa0811080-mRNA-1 |
| chr5_3 | five_prime_UTR | 40195150 | 40195288 | 40195150 | ID=Msa0811080-mRNA-1:five_prime_utr;Parent=Msa0811080-mRNA-1 |
| chr5_3 | CDS | 40195289 | 40195299 | 40195289 | ID=Msa0811080-mRNA-1:cds;Parent=Msa0811080-mRNA-1 |
| chr5_3 | CDS | 40195664 | 40195844 | 40195664 | ID=Msa0811080-mRNA-1:cds;Parent=Msa0811080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
