Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051220 | sp|Q8GZD4|NAT3_ARATH | 64.083 | 529 | 153 | 2 | 22 | 513 | 23 | 551 | 0.0 | 672 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051220 | G7I4I7 | 90.710 | 549 | 15 | 1 | 1 | 513 | 1 | 549 | 0.0 | 1007 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0051190 | Msa0051220 | 0.957347 | 3.377876e-115 | -8.615850e-47 |
| Msa0051220 | Msa0051440 | 0.883080 | 6.073494e-71 | -8.615850e-47 |
| Msa0051220 | Msa1377090 | 0.962739 | 3.083011e-121 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051220 | MtrunA17_Chr1g0154001 | 90.710 | 549 | 15 | 1 | 1 | 513 | 1 | 549 | 0.0 | 1007 |
| Msa0051220 | MtrunA17_Chr8g0379171 | 53.229 | 511 | 203 | 1 | 35 | 509 | 12 | 522 | 0.0 | 550 |
| Msa0051220 | MtrunA17_Chr3g0119521 | 53.113 | 514 | 204 | 2 | 33 | 509 | 5 | 518 | 0.0 | 540 |
| Msa0051220 | MtrunA17_Chr2g0284061 | 50.000 | 510 | 219 | 1 | 36 | 509 | 13 | 522 | 0.0 | 527 |
| Msa0051220 | MtrunA17_Chr4g0059331 | 46.753 | 539 | 233 | 5 | 12 | 510 | 7 | 531 | 1.64e-165 | 479 |
| Msa0051220 | MtrunA17_Chr3g0117941 | 47.368 | 513 | 232 | 2 | 36 | 510 | 19 | 531 | 5.18e-165 | 478 |
| Msa0051220 | MtrunA17_Chr8g0364611 | 46.771 | 511 | 234 | 2 | 38 | 510 | 22 | 532 | 1.71e-162 | 471 |
| Msa0051220 | MtrunA17_Chr1g0207021 | 46.693 | 514 | 232 | 4 | 36 | 510 | 16 | 526 | 3.48e-157 | 457 |
| Msa0051220 | MtrunA17_Chr5g0414131 | 44.151 | 530 | 252 | 5 | 21 | 510 | 12 | 537 | 2.36e-154 | 451 |
| Msa0051220 | MtrunA17_Chr3g0134911 | 42.468 | 551 | 240 | 7 | 32 | 510 | 39 | 584 | 3.92e-143 | 424 |
| Msa0051220 | MtrunA17_Chr5g0405471 | 43.750 | 528 | 237 | 5 | 38 | 510 | 39 | 561 | 1.42e-142 | 421 |
| Msa0051220 | MtrunA17_Chr2g0320981 | 33.147 | 537 | 281 | 11 | 42 | 506 | 146 | 676 | 1.13e-90 | 291 |
| Msa0051220 | MtrunA17_Chr4g0027121 | 31.540 | 539 | 292 | 9 | 37 | 503 | 148 | 681 | 4.01e-85 | 277 |
| Msa0051220 | MtrunA17_Chr8g0367361 | 29.268 | 533 | 305 | 5 | 42 | 506 | 238 | 766 | 4.57e-78 | 260 |
| Msa0051220 | MtrunA17_Chr5g0412181 | 30.712 | 534 | 294 | 6 | 42 | 505 | 167 | 694 | 7.68e-76 | 253 |
| Msa0051220 | MtrunA17_Chr2g0332871 | 32.271 | 502 | 258 | 12 | 63 | 511 | 166 | 638 | 9.37e-75 | 248 |
| Msa0051220 | MtrunA17_Chr5g0418111 | 53.571 | 56 | 26 | 0 | 442 | 497 | 39 | 94 | 6.76e-15 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051220 | AT2G26510.1 | 64.083 | 529 | 153 | 2 | 22 | 513 | 23 | 551 | 0.0 | 672 |
| Msa0051220 | AT2G34190.1 | 51.373 | 510 | 212 | 1 | 36 | 509 | 13 | 522 | 0.0 | 539 |
| Msa0051220 | AT2G05760.1 | 51.663 | 511 | 210 | 2 | 36 | 509 | 8 | 518 | 0.0 | 536 |
| Msa0051220 | AT5G62890.1 | 46.369 | 537 | 238 | 3 | 12 | 510 | 7 | 531 | 5.84e-164 | 475 |
| Msa0051220 | AT5G62890.2 | 46.369 | 537 | 238 | 3 | 12 | 510 | 7 | 531 | 5.84e-164 | 475 |
| Msa0051220 | AT5G62890.3 | 46.369 | 537 | 238 | 3 | 12 | 510 | 7 | 531 | 5.84e-164 | 475 |
| Msa0051220 | AT2G26510.3 | 69.006 | 342 | 106 | 0 | 22 | 363 | 23 | 364 | 6.34e-164 | 471 |
| Msa0051220 | AT2G26510.2 | 69.006 | 342 | 106 | 0 | 22 | 363 | 23 | 364 | 9.72e-164 | 471 |
| Msa0051220 | AT1G60030.1 | 44.886 | 528 | 250 | 3 | 21 | 510 | 13 | 537 | 1.07e-161 | 470 |
| Msa0051220 | AT1G10540.1 | 44.653 | 533 | 247 | 7 | 21 | 510 | 11 | 538 | 9.14e-155 | 452 |
| Msa0051220 | AT5G49990.2 | 46.784 | 513 | 235 | 2 | 36 | 510 | 15 | 527 | 8.10e-154 | 449 |
| Msa0051220 | AT5G49990.3 | 46.784 | 513 | 235 | 2 | 36 | 510 | 15 | 527 | 8.10e-154 | 449 |
| Msa0051220 | AT5G49990.1 | 46.784 | 513 | 235 | 2 | 36 | 510 | 15 | 527 | 8.10e-154 | 449 |
| Msa0051220 | AT5G49990.4 | 46.784 | 513 | 235 | 2 | 36 | 510 | 15 | 527 | 8.10e-154 | 449 |
| Msa0051220 | AT1G49960.1 | 45.597 | 511 | 240 | 2 | 38 | 510 | 15 | 525 | 3.59e-142 | 419 |
| Msa0051220 | AT1G65550.1 | 42.278 | 518 | 252 | 4 | 38 | 510 | 25 | 540 | 4.84e-141 | 417 |
| Msa0051220 | AT5G62890.4 | 47.285 | 442 | 197 | 1 | 36 | 441 | 19 | 460 | 2.17e-137 | 405 |
| Msa0051220 | AT1G10540.2 | 45.930 | 344 | 176 | 5 | 21 | 359 | 11 | 349 | 7.81e-103 | 314 |
| Msa0051220 | AT5G25420.1 | 41.902 | 389 | 188 | 6 | 38 | 423 | 37 | 390 | 3.08e-91 | 285 |
| Msa0051220 | AT2G27810.1 | 31.657 | 537 | 294 | 8 | 41 | 507 | 167 | 700 | 9.05e-82 | 269 |
| Msa0051220 | AT2G27810.4 | 30.303 | 561 | 294 | 9 | 41 | 507 | 167 | 724 | 6.91e-77 | 256 |
| Msa0051220 | AT2G27810.2 | 33.726 | 424 | 226 | 5 | 41 | 410 | 167 | 589 | 5.34e-69 | 232 |
| Msa0051220 | AT4G38050.1 | 29.423 | 537 | 307 | 5 | 43 | 511 | 175 | 707 | 2.36e-68 | 233 |
| Msa0051220 | AT2G27810.3 | 36.556 | 331 | 191 | 3 | 41 | 353 | 167 | 496 | 2.11e-61 | 211 |
Find 159 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGCCGCAGCCAGGCTTTC+TGG | 0.141398 | 1_2:-5313317 | Msa0051220:CDS |
| TTATCTGCATTGCCGTTATT+TGG | 0.173804 | 1_2:-5314264 | Msa0051220:CDS |
| AATTTACCCCAGATAAAATT+TGG | 0.186838 | 1_2:+5311758 | None:intergenic |
| GGACCACCACCTCAGAATTT+TGG | 0.200219 | 1_2:-5316094 | Msa0051220:CDS |
| TTCAAGGCTTCCGGTGATTA+TGG | 0.205728 | 1_2:-5315254 | Msa0051220:CDS |
| GCAATTGTGCTCATTAAATT+AGG | 0.216146 | 1_2:+5311828 | None:intergenic |
| ATGTCTATTTCAGGTAAATT+TGG | 0.226588 | 1_2:-5312638 | Msa0051220:intron |
| GCCGCTATCCTTACCGTTGC+TGG | 0.267986 | 1_2:-5314235 | Msa0051220:CDS |
| CAGCCGAAGCATCGGGCTTC+AGG | 0.280020 | 1_2:-5313267 | Msa0051220:intron |
| TGCAGCTGAAGCATTGCTTT+TGG | 0.280132 | 1_2:-5315604 | Msa0051220:intron |
| CTATCTCCTGCAGCTGCTAC+TGG | 0.282930 | 1_2:-5312468 | Msa0051220:intron |
| TTCAAAGCTAGTCATGTCTT+TGG | 0.283918 | 1_2:-5313751 | Msa0051220:CDS |
| GACATGACTAGCTTTGAATA+TGG | 0.296354 | 1_2:+5313756 | None:intergenic |
| TTCAGACTTGGTTTGGTTCA+AGG | 0.300502 | 1_2:-5315270 | Msa0051220:CDS |
| AACTTTCGCATCTGAGAATC+AGG | 0.310869 | 1_2:-5315173 | Msa0051220:intron |
| TTCGGCTTAACCTTGTTTCT+CGG | 0.314131 | 1_2:-5312393 | Msa0051220:CDS |
| TCTGTCCACAGCTGTTTGTT+TGG | 0.324863 | 1_2:+5311992 | None:intergenic |
| CAGTATATAGCAGCGAATAT+TGG | 0.336373 | 1_2:+5312590 | None:intergenic |
| TGCCTAAAATGAAAATTGTT+TGG | 0.340344 | 1_2:+5311789 | None:intergenic |
| TTGGTTTGGTTCAAGGCTTC+CGG | 0.345806 | 1_2:-5315263 | Msa0051220:CDS |
| TATCTGCATTGCCGTTATTT+GGG | 0.347060 | 1_2:-5314263 | Msa0051220:CDS |
| TCAAGGCTTCCGGTGATTAT+GGG | 0.354222 | 1_2:-5315253 | Msa0051220:CDS |
| GCATCCATTCAAATCCTTCA+TGG | 0.366156 | 1_2:-5316015 | Msa0051220:CDS |
| GAAAACATAGATATTCCTTA+TGG | 0.375416 | 1_2:+5312413 | None:intergenic |
| CAGACATTGTTGTTTATGTC+TGG | 0.378631 | 1_2:-5315307 | Msa0051220:CDS |
| CATCCACCATTGGTTCTAAC+TGG | 0.379887 | 1_2:+5312318 | None:intergenic |
| GATTCTCAGATGCGAAAGTT+TGG | 0.384482 | 1_2:+5315176 | None:intergenic |
| GAGAGGAATTGATGCGAAAA+AGG | 0.386029 | 1_2:+5312613 | None:intergenic |
| AACGTAGTAACCTTAATAAC+TGG | 0.386354 | 1_2:-5316410 | Msa0051220:five_prime_UTR |
| AGTATATAGCAGCGAATATT+GGG | 0.387392 | 1_2:+5312591 | None:intergenic |
| AAGCAACCTTGTACCTCAAA+TGG | 0.396389 | 1_2:-5315535 | Msa0051220:CDS |
| AGCACTTGTCACTTCTTTCG+AGG | 0.406623 | 1_2:-5313716 | Msa0051220:intron |
| TCAAAGCTAGTCATGTCTTT+GGG | 0.407287 | 1_2:-5313750 | Msa0051220:CDS |
| GGCATTTGTGGCTCTATTGT+TGG | 0.413169 | 1_2:-5313132 | Msa0051220:intron |
| CCTGAACTGACGGTGGTGCT+TGG | 0.414463 | 1_2:+5316128 | None:intergenic |
| GACTTTCAAGGGGTCCCACT+TGG | 0.421667 | 1_2:-5316072 | Msa0051220:CDS |
| CAGCACTACATTGTGATGCT+TGG | 0.426352 | 1_2:-5315576 | Msa0051220:CDS |
| ACATTGCTTCAGACTTGGTT+TGG | 0.426916 | 1_2:-5315277 | Msa0051220:CDS |
| TCGGCTTAACCTTGTTTCTC+GGG | 0.432455 | 1_2:-5312392 | Msa0051220:CDS |
| ACATGACTAGCTTTGAATAT+GGG | 0.438479 | 1_2:+5313757 | None:intergenic |
| ACATGACTCCCACCCATTTG+AGG | 0.442621 | 1_2:+5315522 | None:intergenic |
| TAGTCATGTCTTTGGGATGA+TGG | 0.446341 | 1_2:-5313743 | Msa0051220:CDS |
| CAGACATAAACAACAATGTC+TGG | 0.448314 | 1_2:+5315308 | None:intergenic |
| CCAACTGTGGCAATAATAGT+TGG | 0.450422 | 1_2:-5312041 | Msa0051220:CDS |
| GGGTGTTGCACCAGAAAGCC+TGG | 0.450632 | 1_2:+5313307 | None:intergenic |
| GGTGGGTTCCTTTCCAGAAA+AGG | 0.452846 | 1_2:-5311959 | Msa0051220:CDS |
| CCAAGCACCACCGTCAGTTC+AGG | 0.456536 | 1_2:-5316128 | Msa0051220:CDS |
| ATGTGCTCAGCCGAAGCATC+GGG | 0.457152 | 1_2:-5313274 | Msa0051220:CDS |
| TGAGGTGGTGGTCCCGGTGG+CGG | 0.457958 | 1_2:+5316103 | None:intergenic |
| TCTGCTGATTGTAACACAAC+AGG | 0.459246 | 1_2:-5314424 | Msa0051220:intron |
| CACAATTGCCTTGTAAGATA+TGG | 0.463208 | 1_2:-5311814 | Msa0051220:three_prime_UTR |
| ACTATTATTGCCACAGTTGG+TGG | 0.463983 | 1_2:+5312044 | None:intergenic |
| TACACAATTAGAACAATTCA+AGG | 0.469316 | 1_2:-5314867 | Msa0051220:CDS |
| AGTTGGTGGAGATGAGAATA+TGG | 0.469785 | 1_2:+5312058 | None:intergenic |
| ATATCTTCCTTGGATATAGT+AGG | 0.474029 | 1_2:-5314818 | Msa0051220:CDS |
| ATGCTGATTGAAGGCATTTG+TGG | 0.474680 | 1_2:-5313144 | Msa0051220:CDS |
| TTGCAAATAACAATTCCATA+AGG | 0.480068 | 1_2:-5312428 | Msa0051220:CDS |
| GTCAGTTCAGGCACCGCCAC+CGG | 0.482612 | 1_2:-5316116 | Msa0051220:CDS |
| GTGGTATGTGTGGTTGGACT+CGG | 0.482699 | 1_2:-5314609 | Msa0051220:CDS |
| TATCTCCTGCAGCTGCTACT+GGG | 0.483276 | 1_2:-5312467 | Msa0051220:intron |
| TCACCTGAAGCCCGATGCTT+CGG | 0.483967 | 1_2:+5313264 | None:intergenic |
| CTGAGCACATGTGCCGGAGG+GGG | 0.486945 | 1_2:+5313287 | None:intergenic |
| GTACTTTCTTCGCCGCAGCC+AGG | 0.487390 | 1_2:-5313325 | Msa0051220:CDS |
| GGCATTAGCATGCTGATTGA+AGG | 0.489200 | 1_2:-5313153 | Msa0051220:CDS |
| ATCACTTGCTTTCTATCTAC+CGG | 0.489632 | 1_2:-5315227 | Msa0051220:CDS |
| CTAACTGGACCATGACCATC+AGG | 0.492436 | 1_2:+5312333 | None:intergenic |
| CATGTGCTCAGCCGAAGCAT+CGG | 0.494578 | 1_2:-5313275 | Msa0051220:CDS |
| GTTTGGCACCATATCTTACA+AGG | 0.495350 | 1_2:+5311806 | None:intergenic |
| TCAACACATTGCTTCAGACT+TGG | 0.504520 | 1_2:-5315282 | Msa0051220:CDS |
| CGGCTGAGCACATGTGCCGG+AGG | 0.507745 | 1_2:+5313284 | None:intergenic |
| AAATTCTGAGGTGGTGGTCC+CGG | 0.508298 | 1_2:+5316097 | None:intergenic |
| AGCTGAAGAAGCTGTTCCGC+TGG | 0.512891 | 1_2:+5316046 | None:intergenic |
| TGCACCAGAAAGCCTGGCTG+CGG | 0.513047 | 1_2:+5313313 | None:intergenic |
| CAGTTAGAACCAATGGTGGA+TGG | 0.514008 | 1_2:-5312317 | Msa0051220:CDS |
| TCCCATTGTCATTGTACCTG+TGG | 0.514468 | 1_2:-5314628 | Msa0051220:CDS |
| GGCTGAGCACATGTGCCGGA+GGG | 0.515040 | 1_2:+5313285 | None:intergenic |
| CTTCGGCTGAGCACATGTGC+CGG | 0.519002 | 1_2:+5313281 | None:intergenic |
| TAGGAATATATTCAGACAAA+CGG | 0.520368 | 1_2:+5311895 | None:intergenic |
| CTTGGTGGTTATCTGTGTCA+TGG | 0.520942 | 1_2:+5316146 | None:intergenic |
| TATTCCTAGTAGATTTCTCT+AGG | 0.521140 | 1_2:-5311880 | Msa0051220:exon |
| ACCACAGGTACAATGACAAT+GGG | 0.521905 | 1_2:+5314627 | None:intergenic |
| TGGACTCGGTCTGTTCGCGA+GGG | 0.523642 | 1_2:-5314595 | Msa0051220:CDS |
| TGCTACATACCATGGTGCAC+GGG | 0.526388 | 1_2:+5314147 | None:intergenic |
| GAACTGACGGTGGTGCTTGG+TGG | 0.527613 | 1_2:+5316131 | None:intergenic |
| AGCAACCTTGTACCTCAAAT+GGG | 0.529370 | 1_2:-5315534 | Msa0051220:CDS |
| AGTCATGTCTTTGGGATGAT+GGG | 0.533189 | 1_2:-5313742 | Msa0051220:CDS |
| TTGCTACATACCATGGTGCA+CGG | 0.537859 | 1_2:+5314146 | None:intergenic |
| TTTGAAGCACCTTCATGCTA+AGG | 0.538653 | 1_2:-5314317 | Msa0051220:CDS |
| GTGACTTACCCATCCACCAT+TGG | 0.539247 | 1_2:+5312308 | None:intergenic |
| CATGACTAGCTTTGAATATG+GGG | 0.540448 | 1_2:+5313758 | None:intergenic |
| GTTCGCGAGGGGCTTTCCAA+TGG | 0.542911 | 1_2:-5314583 | Msa0051220:intron |
| ACCATGGTGCACGGGTCAGA+AGG | 0.543944 | 1_2:+5314155 | None:intergenic |
| ACAATCAGCAGAAGGAGCAT+AGG | 0.544491 | 1_2:+5314435 | None:intergenic |
| TTGGACTCGGTCTGTTCGCG+AGG | 0.546006 | 1_2:-5314596 | Msa0051220:CDS |
| CAACTGTGGCAATAATAGTT+GGG | 0.546683 | 1_2:-5312040 | Msa0051220:CDS |
| CATGGTCCAGTTAGAACCAA+TGG | 0.547851 | 1_2:-5312324 | Msa0051220:CDS |
| TCCCACCCATTTGAGGTACA+AGG | 0.549191 | 1_2:+5315529 | None:intergenic |
| AGTCCAAAATTCTGAGGTGG+TGG | 0.551027 | 1_2:+5316091 | None:intergenic |
| GTACCTGTGGTATGTGTGGT+TGG | 0.555163 | 1_2:-5314615 | Msa0051220:CDS |
| GCTGAGCACATGTGCCGGAG+GGG | 0.557764 | 1_2:+5313286 | None:intergenic |
| AGGCTTCCGGTGATTATGGG+TGG | 0.559262 | 1_2:-5315250 | Msa0051220:CDS |
| TATTCCTAGAGAAATCTACT+AGG | 0.561420 | 1_2:+5311876 | None:intergenic |
| TCCTTGGATATAGTAGGACA+TGG | 0.564119 | 1_2:-5314812 | Msa0051220:CDS |
| AACGCCATGAAGGATTTGAA+TGG | 0.564370 | 1_2:+5316011 | None:intergenic |
| GTACCCCACTGAAATGGGTA+TGG | 0.565676 | 1_2:+5313781 | None:intergenic |
| AGCGGCGAAAGCCCAAATAA+CGG | 0.565764 | 1_2:+5314252 | None:intergenic |
| CCAACTATTATTGCCACAGT+TGG | 0.566946 | 1_2:+5312041 | None:intergenic |
| TATGATGAGCCTTAGCATGA+AGG | 0.568732 | 1_2:+5314308 | None:intergenic |
| ATGTTCCATACCCATTTCAG+TGG | 0.568754 | 1_2:-5313786 | Msa0051220:CDS |
| TCAGTTCAGGCACCGCCACC+GGG | 0.569461 | 1_2:-5316115 | Msa0051220:CDS |
| AGTTAGAACCAATGGTGGAT+GGG | 0.570107 | 1_2:-5312316 | Msa0051220:intron |
| GGTGGCGGTGCCTGAACTGA+CGG | 0.570549 | 1_2:+5316118 | None:intergenic |
| ACCTTGTACCTCAAATGGGT+GGG | 0.574764 | 1_2:-5315530 | Msa0051220:CDS |
| AAAAGATACTAACGCCATGA+AGG | 0.576140 | 1_2:+5316001 | None:intergenic |
| GGTTCCTTTCCAGAAAAGGA+AGG | 0.579848 | 1_2:-5311955 | Msa0051220:CDS |
| TGTATGCACCAGCAACGGTA+AGG | 0.580085 | 1_2:+5314227 | None:intergenic |
| TGTTCCATACCCATTTCAGT+GGG | 0.582233 | 1_2:-5313785 | Msa0051220:CDS |
| AACCTTGTACCTCAAATGGG+TGG | 0.584925 | 1_2:-5315531 | Msa0051220:CDS |
| TTCTGGAAAGGAACCCACCA+TGG | 0.587333 | 1_2:+5311963 | None:intergenic |
| TTCTGAGGTGGTGGTCCCGG+TGG | 0.588875 | 1_2:+5316100 | None:intergenic |
| CCTTGGATATAGTAGGACAT+GGG | 0.589670 | 1_2:-5314811 | Msa0051220:CDS |
| CTTGCAGATTGTGTGCAGAT+CGG | 0.590049 | 1_2:-5314462 | Msa0051220:CDS |
| AGGCTCATCATATACTTGAG+AGG | 0.595130 | 1_2:-5314297 | Msa0051220:CDS |
| TACCACAGGTACAATGACAA+TGG | 0.595377 | 1_2:+5314626 | None:intergenic |
| CCCATGTCCTACTATATCCA+AGG | 0.596457 | 1_2:+5314811 | None:intergenic |
| TCATTTATGATCGACATCAC+CGG | 0.597681 | 1_2:+5315208 | None:intergenic |
| GGACTCGGTCTGTTCGCGAG+GGG | 0.599513 | 1_2:-5314594 | Msa0051220:CDS |
| TGGACAGAGGACTTCCATGG+TGG | 0.609884 | 1_2:-5311977 | Msa0051220:CDS |
| GGACAGAGGACTTCCATGGT+GGG | 0.611007 | 1_2:-5311976 | Msa0051220:CDS |
| AGTGATCCACCCATAATCAC+CGG | 0.611658 | 1_2:+5315244 | None:intergenic |
| CATTGTACCTGTGGTATGTG+TGG | 0.617786 | 1_2:-5314619 | Msa0051220:CDS |
| AGTATTGTATGCACCAGCAA+CGG | 0.621068 | 1_2:+5314222 | None:intergenic |
| GGCTGCGGCGAAGAAAGTAC+CGG | 0.621910 | 1_2:+5313328 | None:intergenic |
| CTTGAAAGTCCAAAATTCTG+AGG | 0.626530 | 1_2:+5316085 | None:intergenic |
| GTTCCTTTCCAGAAAAGGAA+GGG | 0.629131 | 1_2:-5311954 | Msa0051220:CDS |
| GGGTCCCACTTGGACTCCAG+CGG | 0.630127 | 1_2:-5316062 | Msa0051220:CDS |
| ATAGCAGCGAATATTGGGAG+AGG | 0.630706 | 1_2:+5312596 | None:intergenic |
| CTGTTCCGCTGGAGTCCAAG+TGG | 0.633722 | 1_2:+5316057 | None:intergenic |
| TAACGTTAAATAGAACAGCA+TGG | 0.634085 | 1_2:+5316518 | None:intergenic |
| CTGTGGACAGAGGACTTCCA+TGG | 0.638844 | 1_2:-5311980 | Msa0051220:CDS |
| ACCAGCAACGGTAAGGATAG+CGG | 0.639172 | 1_2:+5314234 | None:intergenic |
| GTCATGAACACTGCACCTGA+TGG | 0.642428 | 1_2:-5312348 | Msa0051220:CDS |
| GTGTTCATGACAAAATATTG+TGG | 0.643236 | 1_2:+5312360 | None:intergenic |
| TGTTCCGCTGGAGTCCAAGT+GGG | 0.644188 | 1_2:+5316058 | None:intergenic |
| CTTGGATATAGTAGGACATG+GGG | 0.644457 | 1_2:-5314810 | Msa0051220:CDS |
| GGTCCAGTTAGAACCAATGG+TGG | 0.646071 | 1_2:-5312321 | Msa0051220:CDS |
| ATTCTCATCTCCACCAACTG+TGG | 0.646273 | 1_2:-5312054 | Msa0051220:CDS |
| AATTGAGATCCCGAGAAACA+AGG | 0.647055 | 1_2:+5312383 | None:intergenic |
| TGAAGCCAAACAAACAGCTG+TGG | 0.648330 | 1_2:-5311997 | Msa0051220:CDS |
| GAAAGTCCAAAATTCTGAGG+TGG | 0.648379 | 1_2:+5316088 | None:intergenic |
| ACCTTCTGACCCGTGCACCA+TGG | 0.650262 | 1_2:-5314156 | Msa0051220:intron |
| AGTCCAACCACACATACCAC+AGG | 0.653099 | 1_2:+5314612 | None:intergenic |
| AAACAAACAGCTGTGGACAG+AGG | 0.674809 | 1_2:-5311990 | Msa0051220:CDS |
| GTTGTGTTACAATCAGCAGA+AGG | 0.677477 | 1_2:+5314427 | None:intergenic |
| AACACTGCACCTGATGGTCA+TGG | 0.680577 | 1_2:-5312342 | Msa0051220:CDS |
| ATGACTAGCTTTGAATATGG+GGG | 0.701834 | 1_2:+5313759 | None:intergenic |
| GGCGGTGCCTGAACTGACGG+TGG | 0.713228 | 1_2:+5316121 | None:intergenic |
| GTTCCATACCCATTTCAGTG+GGG | 0.714740 | 1_2:-5313784 | Msa0051220:CDS |
| ATATATTCAGACAAACGGAG+AGG | 0.715929 | 1_2:+5311900 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTATTTTTATTTT+TGG | - | chr1_2:5312530-5312549 | Msa0051220:intron | 0.0% |
| !!! | TTTTTTTTATTTTTATTTTT+GGG | - | chr1_2:5312531-5312550 | Msa0051220:intron | 0.0% |
| !! | TTAAAATAAAGAAAAAGAAA+CGG | + | chr1_2:5311888-5311907 | None:intergenic | 10.0% |
| !!! | AATTTTTTTTTTACAAGTTA+AGG | + | chr1_2:5312274-5312293 | None:intergenic | 10.0% |
| !!! | AATTGAAATTTTTAGAATTT+GGG | + | chr1_2:5313176-5313195 | None:intergenic | 10.0% |
| !!! | AAATTGAAATTTTTAGAATT+TGG | + | chr1_2:5313177-5313196 | None:intergenic | 10.0% |
| !! | AATTAAAAATACTAAGAATA+AGG | + | chr1_2:5314534-5314553 | None:intergenic | 10.0% |
| !! | TTCAATGAAAAAAAAAAGTT+TGG | + | chr1_2:5311993-5312012 | None:intergenic | 15.0% |
| !!! | TTTTTAAAAAAAAGTTGCTT+TGG | - | chr1_2:5312433-5312452 | Msa0051220:CDS | 15.0% |
| !!! | GTTTATTAGTTAATATCTTT+TGG | - | chr1_2:5313492-5313511 | Msa0051220:intron | 15.0% |
| !!! | TTTCAAACTTTTATTATAGT+AGG | + | chr1_2:5313691-5313710 | None:intergenic | 15.0% |
| !! | ACTATAATAAAAGTTTGAAA+TGG | - | chr1_2:5313691-5313710 | Msa0051220:intron | 15.0% |
| !!! | TCTTAGTATTTTTAATTCTA+CGG | - | chr1_2:5314537-5314556 | Msa0051220:intron | 15.0% |
| !! | AATTAAGTTAATTCTTCAAA+TGG | + | chr1_2:5314988-5315007 | None:intergenic | 15.0% |
| !!! | TTAAATATTGATTATAGACA+TGG | - | chr1_2:5315311-5315330 | Msa0051220:CDS | 15.0% |
| !! | AATTCTTAACAAATAATCAA+TGG | + | chr1_2:5315339-5315358 | None:intergenic | 15.0% |
| !! | TATATATGAAAATGACAAAA+GGG | + | chr1_2:5315993-5316012 | None:intergenic | 15.0% |
| !! | ATATATATGAAAATGACAAA+AGG | + | chr1_2:5315994-5316013 | None:intergenic | 15.0% |
| !!! | AAAAAGTACTCATGAAAAAA+AGG | + | chr1_2:5311828-5311847 | None:intergenic | 20.0% |
| !! | TTGTGTGAGAAAAAAAAAAA+TGG | - | chr1_2:5312041-5312060 | Msa0051220:CDS | 20.0% |
| !! | TGTGTGAGAAAAAAAAAAAT+GGG | - | chr1_2:5312042-5312061 | Msa0051220:CDS | 20.0% |
| !!! | GTAATTGTTGTTTTTTGTAA+CGG | - | chr1_2:5312777-5312796 | Msa0051220:intron | 20.0% |
| !! | ATGAAAACATATTGTGATTT+CGG | - | chr1_2:5313076-5313095 | Msa0051220:intron | 20.0% |
| !! | CAAACATATAAACTTATGTT+CGG | + | chr1_2:5313132-5313151 | None:intergenic | 20.0% |
| !! | ATAAGTTTATATGTTTGTAG+AGG | - | chr1_2:5313135-5313154 | Msa0051220:CDS | 20.0% |
| !!! | AAATTTTTAGAATTTGGGTT+GGG | + | chr1_2:5313171-5313190 | None:intergenic | 20.0% |
| !! | TAGCAAAAGTAGTATATTTA+GGG | - | chr1_2:5314082-5314101 | Msa0051220:intron | 20.0% |
| !!! | CTTATGTATAAGCTATTTTT+AGG | + | chr1_2:5314296-5314315 | None:intergenic | 20.0% |
| !!! | ATTAAACTTTTTTTCCAAAC+AGG | - | chr1_2:5314324-5314343 | Msa0051220:intron | 20.0% |
| !!! | AACAATTATGTTTTTATTCC+AGG | - | chr1_2:5314398-5314417 | Msa0051220:intron | 20.0% |
| !!! | ATGATTTTATGCTCTATTTT+TGG | - | chr1_2:5315471-5315490 | Msa0051220:intron | 20.0% |
| !! | ATAATTTAATGTGCATGTAA+TGG | + | chr1_2:5315680-5315699 | None:intergenic | 20.0% |
| !!! | ATAAGGAATATCTATGTTTT+CGG | - | chr1_2:5315800-5315819 | Msa0051220:intron | 20.0% |
| !! | TATATATTAAGAAAAGTAGC+CGG | - | chr1_2:5316007-5316026 | Msa0051220:intron | 20.0% |
| !! | ATATATGAAATCAACCAAAA+CGG | + | chr1_2:5316076-5316095 | None:intergenic | 20.0% |
| ! | AAAAAAAGGACCAGTTATTA+AGG | + | chr1_2:5311814-5311833 | None:intergenic | 25.0% |
| !!! | TTTTTCATGAGTACTTTTTC+TGG | - | chr1_2:5311829-5311848 | Msa0051220:three_prime_UTR | 25.0% |
| ! | AAAGAAAAAGAAACGGTTAT+GGG | + | chr1_2:5311881-5311900 | None:intergenic | 25.0% |
| ! | TAAAGAAAAAGAAACGGTTA+TGG | + | chr1_2:5311882-5311901 | None:intergenic | 25.0% |
| !!! | ATGTTAGTATTGCTAGTTTT+TGG | - | chr1_2:5312803-5312822 | Msa0051220:intron | 25.0% |
| ! | ACAATAACAACAACAAAATC+AGG | + | chr1_2:5312856-5312875 | None:intergenic | 25.0% |
| ! | GTCTCTCATTATATGAAATA+AGG | - | chr1_2:5313105-5313124 | Msa0051220:intron | 25.0% |
| !!! | AATTTTTAGAATTTGGGTTG+GGG | + | chr1_2:5313170-5313189 | None:intergenic | 25.0% |
| !!! | GAAATTTTTAGAATTTGGGT+TGG | + | chr1_2:5313172-5313191 | None:intergenic | 25.0% |
| !! | TTGAATCACCAATTTTATGT+TGG | + | chr1_2:5313282-5313301 | None:intergenic | 25.0% |
| ! | TACACAATTAGAACAATTCA+AGG | - | chr1_2:5313344-5313363 | Msa0051220:intron | 25.0% |
| !!! | TCTTTTTTCAATATCTTCCT+TGG | - | chr1_2:5313383-5313402 | Msa0051220:intron | 25.0% |
| !! | TTTCTCTCTTTATCATCTTT+TGG | - | chr1_2:5313523-5313542 | Msa0051220:intron | 25.0% |
| !!! | TTTTTTTCTCTTTCTTTACC+AGG | - | chr1_2:5313552-5313571 | Msa0051220:intron | 25.0% |
| ! | TATAGTAGGTAATTTATTCG+TGG | + | chr1_2:5313677-5313696 | None:intergenic | 25.0% |
| ! | AAACTCATAAGTGAATGTTT+CGG | + | chr1_2:5313826-5313845 | None:intergenic | 25.0% |
| !! | ACTTATTTGAGTCTTTTCTT+TGG | + | chr1_2:5314016-5314035 | None:intergenic | 25.0% |
| ! | GTAGCAAAAGTAGTATATTT+AGG | - | chr1_2:5314081-5314100 | Msa0051220:intron | 25.0% |
| !! | TAGTATATTTAGGGTCTATT+TGG | - | chr1_2:5314091-5314110 | Msa0051220:intron | 25.0% |
| ! | ATCAACAATAATGGTAGTAT+AGG | + | chr1_2:5314795-5314814 | None:intergenic | 25.0% |
| ! | AACTGATGATCTAATTAATC+TGG | - | chr1_2:5314827-5314846 | Msa0051220:CDS | 25.0% |
| !! | CTTGTAACTTTTGTGATATA+GGG | - | chr1_2:5315037-5315056 | Msa0051220:intron | 25.0% |
| ! | AAAAAATGTGAATTTGCCAA+TGG | + | chr1_2:5315243-5315262 | None:intergenic | 25.0% |
| ! | TATTTAACCAAATAAAACCC+AGG | + | chr1_2:5315298-5315317 | None:intergenic | 25.0% |
| ! | GATAATTGTAGTGAAAATGT+CGG | - | chr1_2:5315390-5315409 | Msa0051220:intron | 25.0% |
| ! | ATTACACTTCAATTCTTGTT+TGG | - | chr1_2:5315502-5315521 | Msa0051220:intron | 25.0% |
| ! | TAAGTAACATTTAAGTGCAA+TGG | + | chr1_2:5315534-5315553 | None:intergenic | 25.0% |
| ! | AAATTTACCTGAAATAGACA+TGG | + | chr1_2:5315574-5315593 | None:intergenic | 25.0% |
| !! | ATGTCTATTTCAGGTAAATT+TGG | - | chr1_2:5315573-5315592 | Msa0051220:CDS | 25.0% |
| !!! | GCTATATACTGTGTTTTATT+CGG | - | chr1_2:5315633-5315652 | Msa0051220:intron | 25.0% |
| ! | GATAGAGAGATAATTGTATA+AGG | + | chr1_2:5315728-5315747 | None:intergenic | 25.0% |
| ! | TTGCAAATAACAATTCCATA+AGG | - | chr1_2:5315783-5315802 | Msa0051220:intron | 25.0% |
| ! | GAAAACATAGATATTCCTTA+TGG | + | chr1_2:5315801-5315820 | None:intergenic | 25.0% |
| !! | ATGTTACTAAAATACCGTTT+TGG | - | chr1_2:5316059-5316078 | Msa0051220:CDS | 25.0% |
| ! | TAGGAATATATTCAGACAAA+CGG | + | chr1_2:5316319-5316338 | None:intergenic | 25.0% |
| !! | TGCCAAACAATTTTCATTTT+AGG | - | chr1_2:5316420-5316439 | Msa0051220:five_prime_UTR | 25.0% |
| ! | TGCCTAAAATGAAAATTGTT+TGG | + | chr1_2:5316425-5316444 | None:intergenic | 25.0% |
| !! | ATTAGTAGCCAAATTTTATC+TGG | - | chr1_2:5316445-5316464 | Msa0051220:five_prime_UTR | 25.0% |
| !! | TTAGTAGCCAAATTTTATCT+GGG | - | chr1_2:5316446-5316465 | Msa0051220:five_prime_UTR | 25.0% |
| ! | AATTTACCCCAGATAAAATT+TGG | + | chr1_2:5316456-5316475 | None:intergenic | 25.0% |
| AACGTAGTAACCTTAATAAC+TGG | - | chr1_2:5311801-5311820 | Msa0051220:three_prime_UTR | 30.0% | |
| ! | TCAGAATTTTGGACTTTCAA+GGG | - | chr1_2:5312128-5312147 | Msa0051220:intron | 30.0% |
| GATCACTTGATGAAAAAGAT+TGG | - | chr1_2:5312725-5312744 | Msa0051220:intron | 30.0% | |
| !!! | GTATTGCTAGTTTTTGGTAA+TGG | - | chr1_2:5312809-5312828 | Msa0051220:intron | 30.0% |
| !! | TATTGTTTTGTAGCACGATA+AGG | - | chr1_2:5312870-5312889 | Msa0051220:intron | 30.0% |
| AGTTTATATGTTTGTAGAGG+TGG | - | chr1_2:5313138-5313157 | Msa0051220:CDS | 30.0% | |
| TGCTTTGTCCAACATAAAAT+TGG | - | chr1_2:5313271-5313290 | Msa0051220:CDS | 30.0% | |
| ATATCTTCCTTGGATATAGT+AGG | - | chr1_2:5313393-5313412 | Msa0051220:intron | 30.0% | |
| ! | ACAACAACCTTTTACATTTC+CGG | - | chr1_2:5313861-5313880 | Msa0051220:intron | 30.0% |
| AATACGCTGAAAACAACTTA+TGG | + | chr1_2:5314199-5314218 | None:intergenic | 30.0% | |
| AACTTGGAACAGTTAAATTG+AGG | + | chr1_2:5314351-5314370 | None:intergenic | 30.0% | |
| TCAGAAAGAGAATTTGAACT+TGG | + | chr1_2:5314367-5314386 | None:intergenic | 30.0% | |
| !! | ACATGACTAGCTTTGAATAT+GGG | + | chr1_2:5314457-5314476 | None:intergenic | 30.0% |
| AAGTTTCTACATGTCATATC+TGG | + | chr1_2:5314606-5314625 | None:intergenic | 30.0% | |
| TTTAATGTAGCTACATGTGT+CGG | - | chr1_2:5314647-5314666 | Msa0051220:intron | 30.0% | |
| ! | AATTTTACAGCTTCATTCTC+TGG | - | chr1_2:5314746-5314765 | Msa0051220:intron | 30.0% |
| TAACAACGGATCAACAATAA+TGG | + | chr1_2:5314804-5314823 | None:intergenic | 30.0% | |
| ! | GATCATCAGTTTGATAACAA+CGG | + | chr1_2:5314818-5314837 | None:intergenic | 30.0% |
| ! | AAATTTTGAATGCAGTCAAC+CGG | - | chr1_2:5314864-5314883 | Msa0051220:CDS | 30.0% |
| CCTATATCACAAAAGTTACA+AGG | + | chr1_2:5315039-5315058 | None:intergenic | 30.0% | |
| ! | CCTTGTAACTTTTGTGATAT+AGG | - | chr1_2:5315036-5315055 | Msa0051220:intron | 30.0% |
| ! | TTATGTTTAGTGTTCTGAGT+AGG | - | chr1_2:5315152-5315171 | Msa0051220:intron | 30.0% |
| ! | GATTTTTCCATGTCTATTTC+AGG | - | chr1_2:5315564-5315583 | Msa0051220:CDS | 30.0% |
| AGTATATAGCAGCGAATATT+GGG | + | chr1_2:5315623-5315642 | None:intergenic | 30.0% | |
| ATTTAATGTGCATGTAATGG+TGG | + | chr1_2:5315677-5315696 | None:intergenic | 30.0% | |
| GTGTTCATGACAAAATATTG+TGG | + | chr1_2:5315854-5315873 | None:intergenic | 30.0% | |
| ACAAAAGGGACTTGTAAAAA+GGG | + | chr1_2:5315979-5315998 | None:intergenic | 30.0% | |
| AATAGACACGATAAATACAC+CGG | + | chr1_2:5316029-5316048 | None:intergenic | 30.0% | |
| TATTCCTAGTAGATTTCTCT+AGG | - | chr1_2:5316331-5316350 | Msa0051220:five_prime_UTR | 30.0% | |
| TATTCCTAGAGAAATCTACT+AGG | + | chr1_2:5316338-5316357 | None:intergenic | 30.0% | |
| GCAATTGTGCTCATTAAATT+AGG | + | chr1_2:5316386-5316405 | None:intergenic | 30.0% | |
| ! | TAGTAGCCAAATTTTATCTG+GGG | - | chr1_2:5316447-5316466 | Msa0051220:five_prime_UTR | 30.0% |
| CTTGAAAGTCCAAAATTCTG+AGG | + | chr1_2:5312129-5312148 | None:intergenic | 35.0% | |
| ! | CTCAGAATTTTGGACTTTCA+AGG | - | chr1_2:5312127-5312146 | Msa0051220:intron | 35.0% |
| ! | CAGAATTTTGGACTTTCAAG+GGG | - | chr1_2:5312129-5312148 | Msa0051220:intron | 35.0% |
| AAAAGATACTAACGCCATGA+AGG | + | chr1_2:5312213-5312232 | None:intergenic | 35.0% | |
| !!! | TGCTAGTTTTTGGTAATGGT+AGG | - | chr1_2:5312813-5312832 | Msa0051220:intron | 35.0% |
| !!! | GCTAGTTTTTGGTAATGGTA+GGG | - | chr1_2:5312814-5312833 | Msa0051220:intron | 35.0% |
| CAGACATAAACAACAATGTC+TGG | + | chr1_2:5312906-5312925 | None:intergenic | 35.0% | |
| !! | CAGACATTGTTGTTTATGTC+TGG | - | chr1_2:5312904-5312923 | Msa0051220:intron | 35.0% |
| ATCACTTGCTTTCTATCTAC+CGG | - | chr1_2:5312984-5313003 | Msa0051220:intron | 35.0% | |
| TCATTTATGATCGACATCAC+CGG | + | chr1_2:5313006-5313025 | None:intergenic | 35.0% | |
| TTATCTGCATTGCCGTTATT+TGG | - | chr1_2:5313947-5313966 | Msa0051220:intron | 35.0% | |
| TATCTGCATTGCCGTTATTT+GGG | - | chr1_2:5313948-5313967 | Msa0051220:intron | 35.0% | |
| !! | ACTACTTTTGCTACATACCA+TGG | + | chr1_2:5314075-5314094 | None:intergenic | 35.0% |
| GAAAACAACTTATGGACATG+AGG | + | chr1_2:5314191-5314210 | None:intergenic | 35.0% | |
| AGTTAAATTGAGGTCCTGTT+TGG | + | chr1_2:5314341-5314360 | None:intergenic | 35.0% | |
| !! | ATGACTAGCTTTGAATATGG+GGG | + | chr1_2:5314455-5314474 | None:intergenic | 35.0% |
| !! | CATGACTAGCTTTGAATATG+GGG | + | chr1_2:5314456-5314475 | None:intergenic | 35.0% |
| !! | GACATGACTAGCTTTGAATA+TGG | + | chr1_2:5314458-5314477 | None:intergenic | 35.0% |
| TTCAAAGCTAGTCATGTCTT+TGG | - | chr1_2:5314460-5314479 | Msa0051220:CDS | 35.0% | |
| TCAAAGCTAGTCATGTCTTT+GGG | - | chr1_2:5314461-5314480 | Msa0051220:CDS | 35.0% | |
| TATGTAGCACTTCAGATCAA+AGG | + | chr1_2:5314708-5314727 | None:intergenic | 35.0% | |
| CAATGGTATAACTAGACACT+AGG | + | chr1_2:5315226-5315245 | None:intergenic | 35.0% | |
| CTAGTGTCTAGTTATACCAT+TGG | - | chr1_2:5315224-5315243 | Msa0051220:CDS | 35.0% | |
| CAGTATATAGCAGCGAATAT+TGG | + | chr1_2:5315624-5315643 | None:intergenic | 35.0% | |
| !! | TGTGTTTTATTCGGCATTGT+CGG | - | chr1_2:5315642-5315661 | Msa0051220:intron | 35.0% |
| GACAAAAGGGACTTGTAAAA+AGG | + | chr1_2:5315980-5315999 | None:intergenic | 35.0% | |
| CAACTGTGGCAATAATAGTT+GGG | - | chr1_2:5316171-5316190 | Msa0051220:exon | 35.0% | |
| ATATATTCAGACAAACGGAG+AGG | + | chr1_2:5316314-5316333 | None:intergenic | 35.0% | |
| CACAATTGCCTTGTAAGATA+TGG | - | chr1_2:5316397-5316416 | Msa0051220:five_prime_UTR | 35.0% | |
| ! | GAAAGTCCAAAATTCTGAGG+TGG | + | chr1_2:5312126-5312145 | None:intergenic | 40.0% |
| GCATCCATTCAAATCCTTCA+TGG | - | chr1_2:5312196-5312215 | Msa0051220:intron | 40.0% | |
| AACGCCATGAAGGATTTGAA+TGG | + | chr1_2:5312203-5312222 | None:intergenic | 40.0% | |
| AAGCAACCTTGTACCTCAAA+TGG | - | chr1_2:5312676-5312695 | Msa0051220:intron | 40.0% | |
| AGCAACCTTGTACCTCAAAT+GGG | - | chr1_2:5312677-5312696 | Msa0051220:intron | 40.0% | |
| TCAACACATTGCTTCAGACT+TGG | - | chr1_2:5312929-5312948 | Msa0051220:intron | 40.0% | |
| ! | ACATTGCTTCAGACTTGGTT+TGG | - | chr1_2:5312934-5312953 | Msa0051220:intron | 40.0% |
| !! | TTCAGACTTGGTTTGGTTCA+AGG | - | chr1_2:5312941-5312960 | Msa0051220:intron | 40.0% |
| GATTCTCAGATGCGAAAGTT+TGG | + | chr1_2:5313038-5313057 | None:intergenic | 40.0% | |
| AACTTTCGCATCTGAGAATC+AGG | - | chr1_2:5313038-5313057 | Msa0051220:intron | 40.0% | |
| ACGTGTGGTTTATGCTTGTT+TGG | - | chr1_2:5313231-5313250 | Msa0051220:intron | 40.0% | |
| TATGACACTTGCACTTGTAG+AGG | - | chr1_2:5313315-5313334 | Msa0051220:CDS | 40.0% | |
| TCCTTGGATATAGTAGGACA+TGG | - | chr1_2:5313399-5313418 | Msa0051220:intron | 40.0% | |
| CCTTGGATATAGTAGGACAT+GGG | - | chr1_2:5313400-5313419 | Msa0051220:intron | 40.0% | |
| CTTGGATATAGTAGGACATG+GGG | - | chr1_2:5313401-5313420 | Msa0051220:intron | 40.0% | |
| ACCACAGGTACAATGACAAT+GGG | + | chr1_2:5313587-5313606 | None:intergenic | 40.0% | |
| TACCACAGGTACAATGACAA+TGG | + | chr1_2:5313588-5313607 | None:intergenic | 40.0% | |
| GTCGCACAAATACTTACCAT+TGG | + | chr1_2:5313647-5313666 | None:intergenic | 40.0% | |
| GTTGTGTTACAATCAGCAGA+AGG | + | chr1_2:5313787-5313806 | None:intergenic | 40.0% | |
| ! | TCTGCTGATTGTAACACAAC+AGG | - | chr1_2:5313787-5313806 | Msa0051220:CDS | 40.0% |
| ! | TTTGAAGCACCTTCATGCTA+AGG | - | chr1_2:5313894-5313913 | Msa0051220:intron | 40.0% |
| TATGATGAGCCTTAGCATGA+AGG | + | chr1_2:5313906-5313925 | None:intergenic | 40.0% | |
| AGGCTCATCATATACTTGAG+AGG | - | chr1_2:5313914-5313933 | Msa0051220:intron | 40.0% | |
| AGTATTGTATGCACCAGCAA+CGG | + | chr1_2:5313992-5314011 | None:intergenic | 40.0% | |
| TACTGACATAAGCACTTGTG+TGG | - | chr1_2:5314135-5314154 | Msa0051220:intron | 40.0% | |
| CGTATTTCCATAAGCTCTCT+AGG | - | chr1_2:5314213-5314232 | Msa0051220:CDS | 40.0% | |
| AAGCTATCCTAGAGAGCTTA+TGG | + | chr1_2:5314223-5314242 | None:intergenic | 40.0% | |
| TGGGTATGGAACATAAATCC+TGG | + | chr1_2:5314419-5314438 | None:intergenic | 40.0% | |
| ATGTTCCATACCCATTTCAG+TGG | - | chr1_2:5314425-5314444 | Msa0051220:CDS | 40.0% | |
| TGTTCCATACCCATTTCAGT+GGG | - | chr1_2:5314426-5314445 | Msa0051220:CDS | 40.0% | |
| !! | TAGTCATGTCTTTGGGATGA+TGG | - | chr1_2:5314468-5314487 | Msa0051220:intron | 40.0% |
| !! | AGTCATGTCTTTGGGATGAT+GGG | - | chr1_2:5314469-5314488 | Msa0051220:intron | 40.0% |
| !! | ATGCTGATTGAAGGCATTTG+TGG | - | chr1_2:5315067-5315086 | Msa0051220:intron | 40.0% |
| AGTAGGAGTGAACATGGAAA+GGG | - | chr1_2:5315169-5315188 | Msa0051220:intron | 40.0% | |
| GTGAACATGGAAAGGGTTAT+AGG | - | chr1_2:5315176-5315195 | Msa0051220:CDS | 40.0% | |
| AACATGGAAAGGGTTATAGG+TGG | - | chr1_2:5315179-5315198 | Msa0051220:CDS | 40.0% | |
| ATGGAAATAGCAGTGGAGTA+TGG | + | chr1_2:5315269-5315288 | None:intergenic | 40.0% | |
| AATAAAACCCAGGTTGTGCA+TGG | + | chr1_2:5315288-5315307 | None:intergenic | 40.0% | |
| !!! | TGCACAACCTGGGTTTTATT+TGG | - | chr1_2:5315288-5315307 | Msa0051220:CDS | 40.0% |
| AGTGAAAATGTCGGTCTACT+CGG | - | chr1_2:5315399-5315418 | Msa0051220:intron | 40.0% | |
| GAGAGGAATTGATGCGAAAA+AGG | + | chr1_2:5315601-5315620 | None:intergenic | 40.0% | |
| ! | TTTTATTCGGCATTGTCGGT+AGG | - | chr1_2:5315646-5315665 | Msa0051220:intron | 40.0% |
| ! | TTCGGCTTAACCTTGTTTCT+CGG | - | chr1_2:5315818-5315837 | Msa0051220:intron | 40.0% |
| AATTGAGATCCCGAGAAACA+AGG | + | chr1_2:5315831-5315850 | None:intergenic | 40.0% | |
| !! | AGTTAGAACCAATGGTGGAT+GGG | - | chr1_2:5315895-5315914 | Msa0051220:intron | 40.0% |
| !!! | GTACCTTGTCTTGTTTTGTG+TGG | - | chr1_2:5316105-5316124 | Msa0051220:CDS | 40.0% |
| TTGCCACACAAAACAAGACA+AGG | + | chr1_2:5316111-5316130 | None:intergenic | 40.0% | |
| !! | AGTTGGTGGAGATGAGAATA+TGG | + | chr1_2:5316156-5316175 | None:intergenic | 40.0% |
| ACTATTATTGCCACAGTTGG+TGG | + | chr1_2:5316170-5316189 | None:intergenic | 40.0% | |
| CCAACTATTATTGCCACAGT+TGG | + | chr1_2:5316173-5316192 | None:intergenic | 40.0% | |
| CCAACTGTGGCAATAATAGT+TGG | - | chr1_2:5316170-5316189 | Msa0051220:exon | 40.0% | |
| GTTCCTTTCCAGAAAAGGAA+GGG | - | chr1_2:5316257-5316276 | Msa0051220:five_prime_UTR | 40.0% | |
| ! | TAACATCTCCCTTCCTTTTC+TGG | + | chr1_2:5316268-5316287 | None:intergenic | 40.0% |
| GTTTGGCACCATATCTTACA+AGG | + | chr1_2:5316408-5316427 | None:intergenic | 40.0% | |
| ! | CTTGGTGGTTATCTGTGTCA+TGG | + | chr1_2:5312068-5312087 | None:intergenic | 45.0% |
| !! | AGTCCAAAATTCTGAGGTGG+TGG | + | chr1_2:5312123-5312142 | None:intergenic | 45.0% |
| !!! | TGCAGCTGAAGCATTGCTTT+TGG | - | chr1_2:5312607-5312626 | Msa0051220:CDS | 45.0% |
| CAGCACTACATTGTGATGCT+TGG | - | chr1_2:5312635-5312654 | Msa0051220:intron | 45.0% | |
| AACCTTGTACCTCAAATGGG+TGG | - | chr1_2:5312680-5312699 | Msa0051220:intron | 45.0% | |
| ACCTTGTACCTCAAATGGGT+GGG | - | chr1_2:5312681-5312700 | Msa0051220:intron | 45.0% | |
| !! | TTGGTTTGGTTCAAGGCTTC+CGG | - | chr1_2:5312948-5312967 | Msa0051220:intron | 45.0% |
| TTCAAGGCTTCCGGTGATTA+TGG | - | chr1_2:5312957-5312976 | Msa0051220:intron | 45.0% | |
| TCAAGGCTTCCGGTGATTAT+GGG | - | chr1_2:5312958-5312977 | Msa0051220:intron | 45.0% | |
| AGTGATCCACCCATAATCAC+CGG | + | chr1_2:5312970-5312989 | None:intergenic | 45.0% | |
| GTCAACTGAATTGCTACGTG+TGG | - | chr1_2:5313216-5313235 | Msa0051220:intron | 45.0% | |
| CCCATGTCCTACTATATCCA+AGG | + | chr1_2:5313403-5313422 | None:intergenic | 45.0% | |
| GACAATGGGACTAAACAACC+TGG | + | chr1_2:5313573-5313592 | None:intergenic | 45.0% | |
| TCCCATTGTCATTGTACCTG+TGG | - | chr1_2:5313583-5313602 | Msa0051220:intron | 45.0% | |
| CATTGTACCTGTGGTATGTG+TGG | - | chr1_2:5313592-5313611 | Msa0051220:intron | 45.0% | |
| CTTGCAGATTGTGTGCAGAT+CGG | - | chr1_2:5313749-5313768 | Msa0051220:CDS | 45.0% | |
| ! | ACAATCAGCAGAAGGAGCAT+AGG | + | chr1_2:5313779-5313798 | None:intergenic | 45.0% |
| TGCAGGACCGGAAATGTAAA+AGG | + | chr1_2:5313871-5313890 | None:intergenic | 45.0% | |
| TGCTTCAAATACTGCAGGAC+CGG | + | chr1_2:5313883-5313902 | None:intergenic | 45.0% | |
| !! | GAAGGTGCTTCAAATACTGC+AGG | + | chr1_2:5313888-5313907 | None:intergenic | 45.0% |
| TTGCTACATACCATGGTGCA+CGG | + | chr1_2:5314068-5314087 | None:intergenic | 45.0% | |
| GTTCCATACCCATTTCAGTG+GGG | - | chr1_2:5314427-5314446 | Msa0051220:CDS | 45.0% | |
| ! | AGCACTTGTCACTTCTTTCG+AGG | - | chr1_2:5314495-5314514 | Msa0051220:intron | 45.0% |
| TGTCGGACACTAAGACATGT+TGG | - | chr1_2:5314670-5314689 | Msa0051220:intron | 45.0% | |
| ! | GGCATTAGCATGCTGATTGA+AGG | - | chr1_2:5315058-5315077 | Msa0051220:intron | 45.0% |
| ! | GGCATTTGTGGCTCTATTGT+TGG | - | chr1_2:5315079-5315098 | Msa0051220:intron | 45.0% |
| ! | GTTCTGAGTAGGAGTGAACA+TGG | - | chr1_2:5315163-5315182 | Msa0051220:intron | 45.0% |
| GAGTAGGAGTGAACATGGAA+AGG | - | chr1_2:5315168-5315187 | Msa0051220:intron | 45.0% | |
| TGGAAAGGGTTATAGGTGGA+AGG | - | chr1_2:5315183-5315202 | Msa0051220:CDS | 45.0% | |
| GTTGTGCATGGAAATAGCAG+TGG | + | chr1_2:5315276-5315295 | None:intergenic | 45.0% | |
| !! | TGCTATTTCCATGCACAACC+TGG | - | chr1_2:5315277-5315296 | Msa0051220:CDS | 45.0% |
| ! | GCTATTTCCATGCACAACCT+GGG | - | chr1_2:5315278-5315297 | Msa0051220:CDS | 45.0% |
| TACTCGGTCTCACACACATA+GGG | - | chr1_2:5315415-5315434 | Msa0051220:intron | 45.0% | |
| AGAGTGGTGCAAATGTCATG+TGG | - | chr1_2:5315444-5315463 | Msa0051220:intron | 45.0% | |
| ATAGCAGCGAATATTGGGAG+AGG | + | chr1_2:5315618-5315637 | None:intergenic | 45.0% | |
| ! | TCGGCTTAACCTTGTTTCTC+GGG | - | chr1_2:5315819-5315838 | Msa0051220:intron | 45.0% |
| CATGGTCCAGTTAGAACCAA+TGG | - | chr1_2:5315887-5315906 | Msa0051220:intron | 45.0% | |
| !! | CATCCACCATTGGTTCTAAC+TGG | + | chr1_2:5315896-5315915 | None:intergenic | 45.0% |
| ! | CAGTTAGAACCAATGGTGGA+TGG | - | chr1_2:5315894-5315913 | Msa0051220:intron | 45.0% |
| GGACTTGTAAAAAGGGACTG+AGG | + | chr1_2:5315972-5315991 | None:intergenic | 45.0% | |
| ATTCTCATCTCCACCAACTG+TGG | - | chr1_2:5316157-5316176 | Msa0051220:exon | 45.0% | |
| TGAAGCCAAACAAACAGCTG+TGG | - | chr1_2:5316214-5316233 | Msa0051220:five_prime_UTR | 45.0% | |
| TCTGTCCACAGCTGTTTGTT+TGG | + | chr1_2:5316222-5316241 | None:intergenic | 45.0% | |
| AAACAAACAGCTGTGGACAG+AGG | - | chr1_2:5316221-5316240 | Msa0051220:five_prime_UTR | 45.0% | |
| GGTTCCTTTCCAGAAAAGGA+AGG | - | chr1_2:5316256-5316275 | Msa0051220:five_prime_UTR | 45.0% | |
| !! | TCTCCCTTCCTTTTCTGGAA+AGG | + | chr1_2:5316263-5316282 | None:intergenic | 45.0% |
| !! | AAATTCTGAGGTGGTGGTCC+CGG | + | chr1_2:5312117-5312136 | None:intergenic | 50.0% |
| ! | GGACCACCACCTCAGAATTT+TGG | - | chr1_2:5312117-5312136 | Msa0051220:intron | 50.0% |
| ! | TCCCACCCATTTGAGGTACA+AGG | + | chr1_2:5312685-5312704 | None:intergenic | 50.0% |
| ACATGACTCCCACCCATTTG+AGG | + | chr1_2:5312692-5312711 | None:intergenic | 50.0% | |
| GTACCTGTGGTATGTGTGGT+TGG | - | chr1_2:5313596-5313615 | Msa0051220:intron | 50.0% | |
| AGTCCAACCACACATACCAC+AGG | + | chr1_2:5313602-5313621 | None:intergenic | 50.0% | |
| GTGGTATGTGTGGTTGGACT+CGG | - | chr1_2:5313602-5313621 | Msa0051220:intron | 50.0% | |
| CACACAATCTGCAAGCTGCA+TGG | + | chr1_2:5313744-5313763 | None:intergenic | 50.0% | |
| AGCGGCGAAAGCCCAAATAA+CGG | + | chr1_2:5313962-5313981 | None:intergenic | 50.0% | |
| ACCAGCAACGGTAAGGATAG+CGG | + | chr1_2:5313980-5313999 | None:intergenic | 50.0% | |
| TGTATGCACCAGCAACGGTA+AGG | + | chr1_2:5313987-5314006 | None:intergenic | 50.0% | |
| TGCTACATACCATGGTGCAC+GGG | + | chr1_2:5314067-5314086 | None:intergenic | 50.0% | |
| GTACCCCACTGAAATGGGTA+TGG | + | chr1_2:5314433-5314452 | None:intergenic | 50.0% | |
| ! | GTAGCTACATGTGTCGGTGT+CGG | - | chr1_2:5314653-5314672 | Msa0051220:intron | 50.0% |
| CTACTCGGTCTCACACACAT+AGG | - | chr1_2:5315414-5315433 | Msa0051220:intron | 50.0% | |
| ACACATAGGGAGCAGAAGAG+TGG | - | chr1_2:5315428-5315447 | Msa0051220:intron | 50.0% | |
| TATCTCCTGCAGCTGCTACT+GGG | - | chr1_2:5315744-5315763 | Msa0051220:intron | 50.0% | |
| GTCATGAACACTGCACCTGA+TGG | - | chr1_2:5315863-5315882 | Msa0051220:intron | 50.0% | |
| AACACTGCACCTGATGGTCA+TGG | - | chr1_2:5315869-5315888 | Msa0051220:intron | 50.0% | |
| CTAACTGGACCATGACCATC+AGG | + | chr1_2:5315881-5315900 | None:intergenic | 50.0% | |
| GGTCCAGTTAGAACCAATGG+TGG | - | chr1_2:5315890-5315909 | Msa0051220:intron | 50.0% | |
| GTGACTTACCCATCCACCAT+TGG | + | chr1_2:5315906-5315925 | None:intergenic | 50.0% | |
| ! | TTCTGGAAAGGAACCCACCA+TGG | + | chr1_2:5316251-5316270 | None:intergenic | 50.0% |
| ! | GGTGGGTTCCTTTCCAGAAA+AGG | - | chr1_2:5316252-5316271 | Msa0051220:five_prime_UTR | 50.0% |
| GACTTTCAAGGGGTCCCACT+TGG | - | chr1_2:5312139-5312158 | Msa0051220:intron | 55.0% | |
| TGTTCCGCTGGAGTCCAAGT+GGG | + | chr1_2:5312156-5312175 | None:intergenic | 55.0% | |
| AGCTGAAGAAGCTGTTCCGC+TGG | + | chr1_2:5312168-5312187 | None:intergenic | 55.0% | |
| AGGCTTCCGGTGATTATGGG+TGG | - | chr1_2:5312961-5312980 | Msa0051220:intron | 55.0% | |
| GTGGCTGTTTGAGAGAGCTC+AGG | - | chr1_2:5314154-5314173 | Msa0051220:intron | 55.0% | |
| !! | TGGGGGTACCCCACTGAAAT+GGG | + | chr1_2:5314438-5314457 | None:intergenic | 55.0% |
| !! | ATGGGGGTACCCCACTGAAA+TGG | + | chr1_2:5314439-5314458 | None:intergenic | 55.0% |
| CATGTGCTCAGCCGAAGCAT+CGG | - | chr1_2:5314936-5314955 | Msa0051220:intron | 55.0% | |
| ! | ATGTGCTCAGCCGAAGCATC+GGG | - | chr1_2:5314937-5314956 | Msa0051220:intron | 55.0% |
| TCACCTGAAGCCCGATGCTT+CGG | + | chr1_2:5314950-5314969 | None:intergenic | 55.0% | |
| CTATCTCCTGCAGCTGCTAC+TGG | - | chr1_2:5315743-5315762 | Msa0051220:intron | 55.0% | |
| CTGTGGACAGAGGACTTCCA+TGG | - | chr1_2:5316231-5316250 | Msa0051220:five_prime_UTR | 55.0% | |
| TGGACAGAGGACTTCCATGG+TGG | - | chr1_2:5316234-5316253 | Msa0051220:five_prime_UTR | 55.0% | |
| GGACAGAGGACTTCCATGGT+GGG | - | chr1_2:5316235-5316254 | Msa0051220:five_prime_UTR | 55.0% | |
| GAACTGACGGTGGTGCTTGG+TGG | + | chr1_2:5312083-5312102 | None:intergenic | 60.0% | |
| CCTGAACTGACGGTGGTGCT+TGG | + | chr1_2:5312086-5312105 | None:intergenic | 60.0% | |
| CCAAGCACCACCGTCAGTTC+AGG | - | chr1_2:5312083-5312102 | Msa0051220:intron | 60.0% | |
| CTGTTCCGCTGGAGTCCAAG+TGG | + | chr1_2:5312157-5312176 | None:intergenic | 60.0% | |
| ! | TTGGACTCGGTCTGTTCGCG+AGG | - | chr1_2:5313615-5313634 | Msa0051220:intron | 60.0% |
| ! | TGGACTCGGTCTGTTCGCGA+GGG | - | chr1_2:5313616-5313635 | Msa0051220:intron | 60.0% |
| GTTCGCGAGGGGCTTTCCAA+TGG | - | chr1_2:5313628-5313647 | Msa0051220:intron | 60.0% | |
| GCCGCTATCCTTACCGTTGC+TGG | - | chr1_2:5313976-5313995 | Msa0051220:intron | 60.0% | |
| ACCTTCTGACCCGTGCACCA+TGG | - | chr1_2:5314055-5314074 | Msa0051220:intron | 60.0% | |
| ACCATGGTGCACGGGTCAGA+AGG | + | chr1_2:5314059-5314078 | None:intergenic | 60.0% | |
| ! | GGCTGCGGCGAAGAAAGTAC+CGG | + | chr1_2:5314886-5314905 | None:intergenic | 60.0% |
| GTACTTTCTTCGCCGCAGCC+AGG | - | chr1_2:5314886-5314905 | Msa0051220:intron | 60.0% | |
| TGCACCAGAAAGCCTGGCTG+CGG | + | chr1_2:5314901-5314920 | None:intergenic | 60.0% | |
| ! | GGGTGTTGCACCAGAAAGCC+TGG | + | chr1_2:5314907-5314926 | None:intergenic | 60.0% |
| TTCTGGTGCAACACCCCCTC+CGG | - | chr1_2:5314911-5314930 | Msa0051220:intron | 60.0% | |
| CTTCGGCTGAGCACATGTGC+CGG | + | chr1_2:5314933-5314952 | None:intergenic | 60.0% | |
| GAGATCCCAGTAGCAGCTGC+AGG | + | chr1_2:5315752-5315771 | None:intergenic | 60.0% | |
| ! | GGTGGCGGTGCCTGAACTGA+CGG | + | chr1_2:5312096-5312115 | None:intergenic | 65.0% |
| ! | GTCAGTTCAGGCACCGCCAC+CGG | - | chr1_2:5312095-5312114 | Msa0051220:intron | 65.0% |
| ! | TCAGTTCAGGCACCGCCACC+GGG | - | chr1_2:5312096-5312115 | Msa0051220:intron | 65.0% |
| !! | TTCTGAGGTGGTGGTCCCGG+TGG | + | chr1_2:5312114-5312133 | None:intergenic | 65.0% |
| GGGTCCCACTTGGACTCCAG+CGG | - | chr1_2:5312149-5312168 | Msa0051220:intron | 65.0% | |
| ! | GGACTCGGTCTGTTCGCGAG+GGG | - | chr1_2:5313617-5313636 | Msa0051220:intron | 65.0% |
| TTCGCCGCAGCCAGGCTTTC+TGG | - | chr1_2:5314894-5314913 | Msa0051220:intron | 65.0% | |
| CTGAGCACATGTGCCGGAGG+GGG | + | chr1_2:5314927-5314946 | None:intergenic | 65.0% | |
| GCTGAGCACATGTGCCGGAG+GGG | + | chr1_2:5314928-5314947 | None:intergenic | 65.0% | |
| GGCTGAGCACATGTGCCGGA+GGG | + | chr1_2:5314929-5314948 | None:intergenic | 65.0% | |
| !! | CAGCCGAAGCATCGGGCTTC+AGG | - | chr1_2:5314944-5314963 | Msa0051220:intron | 65.0% |
| GGCGGTGCCTGAACTGACGG+TGG | + | chr1_2:5312093-5312112 | None:intergenic | 70.0% | |
| ! | TGAGGTGGTGGTCCCGGTGG+CGG | + | chr1_2:5312111-5312130 | None:intergenic | 70.0% |
| CGGCTGAGCACATGTGCCGG+AGG | + | chr1_2:5314930-5314949 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 5311696 | 5316537 | 5311696 | ID=Msa0051220;Name=Msa0051220 |
| chr1_2 | mRNA | 5311696 | 5316537 | 5311696 | ID=Msa0051220-mRNA-1;Parent=Msa0051220;Name=Msa0051220-mRNA-1;_AED=0.11;_eAED=0.11;_QI=364|0.91|0.92|1|1|1|13|185|513 |
| chr1_2 | exon | 5311696 | 5312099 | 5311696 | ID=Msa0051220-mRNA-1:exon:1565;Parent=Msa0051220-mRNA-1 |
| chr1_2 | exon | 5312317 | 5312477 | 5312317 | ID=Msa0051220-mRNA-1:exon:1564;Parent=Msa0051220-mRNA-1 |
| chr1_2 | exon | 5312570 | 5312647 | 5312570 | ID=Msa0051220-mRNA-1:exon:1563;Parent=Msa0051220-mRNA-1 |
| chr1_2 | exon | 5313133 | 5313175 | 5313133 | ID=Msa0051220-mRNA-1:exon:1562;Parent=Msa0051220-mRNA-1 |
| chr1_2 | exon | 5313268 | 5313354 | 5313268 | ID=Msa0051220-mRNA-1:exon:1561;Parent=Msa0051220-mRNA-1 |
| chr1_2 | exon | 5313717 | 5313813 | 5313717 | ID=Msa0051220-mRNA-1:exon:1560;Parent=Msa0051220-mRNA-1 |
| chr1_2 | exon | 5314157 | 5314341 | 5314157 | ID=Msa0051220-mRNA-1:exon:1559;Parent=Msa0051220-mRNA-1 |
| chr1_2 | exon | 5314425 | 5314484 | 5314425 | ID=Msa0051220-mRNA-1:exon:1558;Parent=Msa0051220-mRNA-1 |
| chr1_2 | exon | 5314584 | 5314659 | 5314584 | ID=Msa0051220-mRNA-1:exon:1557;Parent=Msa0051220-mRNA-1 |
| chr1_2 | exon | 5314798 | 5314898 | 5314798 | ID=Msa0051220-mRNA-1:exon:1556;Parent=Msa0051220-mRNA-1 |
| chr1_2 | exon | 5315174 | 5315350 | 5315174 | ID=Msa0051220-mRNA-1:exon:1555;Parent=Msa0051220-mRNA-1 |
| chr1_2 | exon | 5315524 | 5315621 | 5315524 | ID=Msa0051220-mRNA-1:exon:1554;Parent=Msa0051220-mRNA-1 |
| chr1_2 | exon | 5316014 | 5316537 | 5316014 | ID=Msa0051220-mRNA-1:exon:1553;Parent=Msa0051220-mRNA-1 |
| chr1_2 | five_prime_UTR | 5316174 | 5316537 | 5316174 | ID=Msa0051220-mRNA-1:five_prime_utr;Parent=Msa0051220-mRNA-1 |
| chr1_2 | CDS | 5316014 | 5316173 | 5316014 | ID=Msa0051220-mRNA-1:cds;Parent=Msa0051220-mRNA-1 |
| chr1_2 | CDS | 5315524 | 5315621 | 5315524 | ID=Msa0051220-mRNA-1:cds;Parent=Msa0051220-mRNA-1 |
| chr1_2 | CDS | 5315174 | 5315350 | 5315174 | ID=Msa0051220-mRNA-1:cds;Parent=Msa0051220-mRNA-1 |
| chr1_2 | CDS | 5314798 | 5314898 | 5314798 | ID=Msa0051220-mRNA-1:cds;Parent=Msa0051220-mRNA-1 |
| chr1_2 | CDS | 5314584 | 5314659 | 5314584 | ID=Msa0051220-mRNA-1:cds;Parent=Msa0051220-mRNA-1 |
| chr1_2 | CDS | 5314425 | 5314484 | 5314425 | ID=Msa0051220-mRNA-1:cds;Parent=Msa0051220-mRNA-1 |
| chr1_2 | CDS | 5314157 | 5314341 | 5314157 | ID=Msa0051220-mRNA-1:cds;Parent=Msa0051220-mRNA-1 |
| chr1_2 | CDS | 5313717 | 5313813 | 5313717 | ID=Msa0051220-mRNA-1:cds;Parent=Msa0051220-mRNA-1 |
| chr1_2 | CDS | 5313268 | 5313354 | 5313268 | ID=Msa0051220-mRNA-1:cds;Parent=Msa0051220-mRNA-1 |
| chr1_2 | CDS | 5313133 | 5313175 | 5313133 | ID=Msa0051220-mRNA-1:cds;Parent=Msa0051220-mRNA-1 |
| chr1_2 | CDS | 5312570 | 5312647 | 5312570 | ID=Msa0051220-mRNA-1:cds;Parent=Msa0051220-mRNA-1 |
| chr1_2 | CDS | 5312317 | 5312477 | 5312317 | ID=Msa0051220-mRNA-1:cds;Parent=Msa0051220-mRNA-1 |
| chr1_2 | CDS | 5311881 | 5312099 | 5311881 | ID=Msa0051220-mRNA-1:cds;Parent=Msa0051220-mRNA-1 |
| chr1_2 | three_prime_UTR | 5311696 | 5311880 | 5311696 | ID=Msa0051220-mRNA-1:three_prime_utr;Parent=Msa0051220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
