Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051440 | sp|Q8GZD4|NAT3_ARATH | 64.272 | 529 | 152 | 2 | 22 | 513 | 23 | 551 | 0.0 | 674 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051440 | G7I4I7 | 90.893 | 549 | 14 | 1 | 1 | 513 | 1 | 549 | 0.0 | 1009 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0051190 | Msa0051440 | 0.870757 | 1.146339e-66 | -8.615850e-47 |
| Msa0051220 | Msa0051440 | 0.883080 | 6.073494e-71 | -8.615850e-47 |
| Msa0051440 | Msa1377090 | 0.870838 | 1.078423e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051440 | MtrunA17_Chr1g0154001 | 90.893 | 549 | 14 | 1 | 1 | 513 | 1 | 549 | 0.0 | 1009 |
| Msa0051440 | MtrunA17_Chr8g0379171 | 53.229 | 511 | 203 | 1 | 35 | 509 | 12 | 522 | 0.0 | 551 |
| Msa0051440 | MtrunA17_Chr3g0119521 | 53.113 | 514 | 204 | 2 | 33 | 509 | 5 | 518 | 0.0 | 541 |
| Msa0051440 | MtrunA17_Chr2g0284061 | 50.000 | 510 | 219 | 1 | 36 | 509 | 13 | 522 | 0.0 | 529 |
| Msa0051440 | MtrunA17_Chr4g0059331 | 46.753 | 539 | 233 | 5 | 12 | 510 | 7 | 531 | 8.16e-166 | 480 |
| Msa0051440 | MtrunA17_Chr3g0117941 | 47.368 | 513 | 232 | 2 | 36 | 510 | 19 | 531 | 3.32e-165 | 478 |
| Msa0051440 | MtrunA17_Chr8g0364611 | 46.771 | 511 | 234 | 2 | 38 | 510 | 22 | 532 | 1.33e-162 | 472 |
| Msa0051440 | MtrunA17_Chr1g0207021 | 46.887 | 514 | 231 | 4 | 36 | 510 | 16 | 526 | 4.71e-158 | 460 |
| Msa0051440 | MtrunA17_Chr5g0414131 | 44.151 | 530 | 252 | 5 | 21 | 510 | 12 | 537 | 1.46e-154 | 451 |
| Msa0051440 | MtrunA17_Chr3g0134911 | 42.287 | 551 | 241 | 7 | 32 | 510 | 39 | 584 | 2.67e-142 | 422 |
| Msa0051440 | MtrunA17_Chr5g0405471 | 43.561 | 528 | 238 | 5 | 38 | 510 | 39 | 561 | 1.44e-141 | 419 |
| Msa0051440 | MtrunA17_Chr2g0320981 | 32.961 | 537 | 282 | 11 | 42 | 506 | 146 | 676 | 1.43e-89 | 288 |
| Msa0051440 | MtrunA17_Chr4g0027121 | 31.354 | 539 | 293 | 9 | 37 | 503 | 148 | 681 | 4.58e-84 | 274 |
| Msa0051440 | MtrunA17_Chr8g0367361 | 29.081 | 533 | 306 | 5 | 42 | 506 | 238 | 766 | 4.99e-77 | 257 |
| Msa0051440 | MtrunA17_Chr5g0412181 | 30.524 | 534 | 295 | 6 | 42 | 505 | 167 | 694 | 7.71e-75 | 250 |
| Msa0051440 | MtrunA17_Chr2g0332871 | 32.072 | 502 | 259 | 12 | 63 | 511 | 166 | 638 | 1.13e-73 | 245 |
| Msa0051440 | MtrunA17_Chr5g0418111 | 53.571 | 56 | 26 | 0 | 442 | 497 | 39 | 94 | 6.76e-15 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051440 | AT2G26510.1 | 64.272 | 529 | 152 | 2 | 22 | 513 | 23 | 551 | 0.0 | 674 |
| Msa0051440 | AT2G34190.1 | 51.569 | 510 | 211 | 1 | 36 | 509 | 13 | 522 | 0.0 | 541 |
| Msa0051440 | AT2G05760.1 | 51.663 | 511 | 210 | 2 | 36 | 509 | 8 | 518 | 0.0 | 537 |
| Msa0051440 | AT2G26510.3 | 69.298 | 342 | 105 | 0 | 22 | 363 | 23 | 364 | 1.42e-164 | 472 |
| Msa0051440 | AT2G26510.2 | 69.298 | 342 | 105 | 0 | 22 | 363 | 23 | 364 | 1.44e-164 | 473 |
| Msa0051440 | AT5G62890.1 | 46.369 | 537 | 238 | 3 | 12 | 510 | 7 | 531 | 4.55e-164 | 476 |
| Msa0051440 | AT5G62890.2 | 46.369 | 537 | 238 | 3 | 12 | 510 | 7 | 531 | 4.55e-164 | 476 |
| Msa0051440 | AT5G62890.3 | 46.369 | 537 | 238 | 3 | 12 | 510 | 7 | 531 | 4.55e-164 | 476 |
| Msa0051440 | AT1G60030.1 | 44.886 | 528 | 250 | 3 | 21 | 510 | 13 | 537 | 6.63e-162 | 470 |
| Msa0051440 | AT1G10540.1 | 44.653 | 533 | 247 | 7 | 21 | 510 | 11 | 538 | 5.54e-155 | 453 |
| Msa0051440 | AT5G49990.2 | 46.784 | 513 | 235 | 2 | 36 | 510 | 15 | 527 | 5.91e-154 | 450 |
| Msa0051440 | AT5G49990.3 | 46.784 | 513 | 235 | 2 | 36 | 510 | 15 | 527 | 5.91e-154 | 450 |
| Msa0051440 | AT5G49990.1 | 46.784 | 513 | 235 | 2 | 36 | 510 | 15 | 527 | 5.91e-154 | 450 |
| Msa0051440 | AT5G49990.4 | 46.784 | 513 | 235 | 2 | 36 | 510 | 15 | 527 | 5.91e-154 | 450 |
| Msa0051440 | AT1G49960.1 | 45.597 | 511 | 240 | 2 | 38 | 510 | 15 | 525 | 2.45e-142 | 420 |
| Msa0051440 | AT1G65550.1 | 42.085 | 518 | 253 | 4 | 38 | 510 | 25 | 540 | 4.27e-140 | 415 |
| Msa0051440 | AT5G62890.4 | 47.285 | 442 | 197 | 1 | 36 | 441 | 19 | 460 | 1.33e-137 | 406 |
| Msa0051440 | AT1G10540.2 | 45.930 | 344 | 176 | 5 | 21 | 359 | 11 | 349 | 7.64e-103 | 314 |
| Msa0051440 | AT5G25420.1 | 41.645 | 389 | 189 | 6 | 38 | 423 | 37 | 390 | 2.29e-90 | 283 |
| Msa0051440 | AT2G27810.1 | 31.471 | 537 | 295 | 8 | 41 | 507 | 167 | 700 | 8.05e-81 | 266 |
| Msa0051440 | AT2G27810.4 | 30.125 | 561 | 295 | 9 | 41 | 507 | 167 | 724 | 8.61e-76 | 253 |
| Msa0051440 | AT2G27810.2 | 33.491 | 424 | 227 | 5 | 41 | 410 | 167 | 589 | 6.66e-68 | 229 |
| Msa0051440 | AT4G38050.1 | 29.236 | 537 | 308 | 5 | 43 | 511 | 175 | 707 | 2.51e-67 | 230 |
| Msa0051440 | AT2G27810.3 | 36.254 | 331 | 192 | 3 | 41 | 353 | 167 | 496 | 2.59e-60 | 207 |
Find 159 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGCCGCAGCCAGGCTTTC+TGG | 0.141398 | 1_2:+5537922 | Msa0051440:CDS |
| TTATCTGCATTGCCGTTATT+TGG | 0.173804 | 1_2:+5536975 | Msa0051440:CDS |
| AATTTACCCCAGATAAAATT+TGG | 0.186838 | 1_2:-5539481 | None:intergenic |
| GGACCACCACCTCAGAATTT+TGG | 0.200219 | 1_2:+5535143 | Msa0051440:CDS |
| TTCAAGGCTTCCGGTGATTA+TGG | 0.205728 | 1_2:+5535984 | Msa0051440:CDS |
| GCAATTGTGCTCATTAAATT+AGG | 0.216146 | 1_2:-5539411 | None:intergenic |
| ATGTCTATTTCAGGTAAATT+TGG | 0.226588 | 1_2:+5538601 | Msa0051440:intron |
| GCCGCTATCCTTACCGTTGC+TGG | 0.267986 | 1_2:+5537004 | Msa0051440:CDS |
| CAGCCGAAGCATCGGGCTTC+AGG | 0.280020 | 1_2:+5537972 | Msa0051440:CDS |
| TGCAGCTGAAGCATTGCTTT+TGG | 0.280132 | 1_2:+5535634 | Msa0051440:intron |
| CTATCTCCTGCAGCTGCTAC+TGG | 0.282930 | 1_2:+5538771 | Msa0051440:intron |
| TTCAAAGCTAGTCATGTCTT+TGG | 0.283918 | 1_2:+5537488 | Msa0051440:CDS |
| GACATGACTAGCTTTGAATA+TGG | 0.296354 | 1_2:-5537483 | None:intergenic |
| TTCAGACTTGGTTTGGTTCA+AGG | 0.300502 | 1_2:+5535968 | Msa0051440:CDS |
| AACTTTCGCATCTGAGAATC+AGG | 0.310869 | 1_2:+5536065 | Msa0051440:CDS |
| TTCGGCTTAACCTTGTTTCT+CGG | 0.314131 | 1_2:+5538846 | Msa0051440:CDS |
| TCTGTCCACAGCTGTTTGTT+TGG | 0.324863 | 1_2:-5539247 | None:intergenic |
| CAGTATATAGCAGCGAATAT+TGG | 0.336373 | 1_2:-5538649 | None:intergenic |
| TGCCTAAAATGAAAATTGTT+TGG | 0.340344 | 1_2:-5539450 | None:intergenic |
| TTGGTTTGGTTCAAGGCTTC+CGG | 0.345806 | 1_2:+5535975 | Msa0051440:CDS |
| TATCTGCATTGCCGTTATTT+GGG | 0.347060 | 1_2:+5536976 | Msa0051440:CDS |
| TCAAGGCTTCCGGTGATTAT+GGG | 0.354222 | 1_2:+5535985 | Msa0051440:CDS |
| GCATCCATTCAAATCCTTCA+TGG | 0.366156 | 1_2:+5535222 | Msa0051440:CDS |
| GAAAACATAGATATTCCTTA+TGG | 0.375416 | 1_2:-5538826 | None:intergenic |
| CAGACATTGTTGTTTATGTC+TGG | 0.378631 | 1_2:+5535931 | Msa0051440:CDS |
| CATCCACCATTGGTTCTAAC+TGG | 0.379887 | 1_2:-5538921 | None:intergenic |
| GATTCTCAGATGCGAAAGTT+TGG | 0.384482 | 1_2:-5536062 | None:intergenic |
| GAGAGGAATTGATGCGAAAA+AGG | 0.386029 | 1_2:-5538626 | None:intergenic |
| AACGTAGTAACCTTAATAAC+TGG | 0.386354 | 1_2:+5534826 | Msa0051440:five_prime_UTR |
| AGTATATAGCAGCGAATATT+GGG | 0.387392 | 1_2:-5538648 | None:intergenic |
| AAGCAACCTTGTACCTCAAA+TGG | 0.396389 | 1_2:+5535703 | Msa0051440:CDS |
| AGCACTTGTCACTTCTTTCG+AGG | 0.406623 | 1_2:+5537523 | Msa0051440:CDS |
| TCAAAGCTAGTCATGTCTTT+GGG | 0.407287 | 1_2:+5537489 | Msa0051440:CDS |
| GGCATTTGTGGCTCTATTGT+TGG | 0.413169 | 1_2:+5538107 | Msa0051440:CDS |
| CCTGAACTGACGGTGGTGCT+TGG | 0.414463 | 1_2:-5535109 | None:intergenic |
| GACTTTCAAGGGGTCCCACT+TGG | 0.421667 | 1_2:+5535165 | Msa0051440:CDS |
| CAGCACTACATTGTGATGCT+TGG | 0.426352 | 1_2:+5535662 | Msa0051440:CDS |
| ACATTGCTTCAGACTTGGTT+TGG | 0.426916 | 1_2:+5535961 | Msa0051440:CDS |
| TCGGCTTAACCTTGTTTCTC+GGG | 0.432455 | 1_2:+5538847 | Msa0051440:CDS |
| ACATGACTAGCTTTGAATAT+GGG | 0.438479 | 1_2:-5537482 | None:intergenic |
| ACATGACTCCCACCCATTTG+AGG | 0.442621 | 1_2:-5535716 | None:intergenic |
| TAGTCATGTCTTTGGGATGA+TGG | 0.446341 | 1_2:+5537496 | Msa0051440:CDS |
| CAGACATAAACAACAATGTC+TGG | 0.448314 | 1_2:-5535930 | None:intergenic |
| CCAACTGTGGCAATAATAGT+TGG | 0.450422 | 1_2:+5539198 | Msa0051440:CDS |
| GGGTGTTGCACCAGAAAGCC+TGG | 0.450632 | 1_2:-5537932 | None:intergenic |
| GGTGGGTTCCTTTCCAGAAA+AGG | 0.452846 | 1_2:+5539280 | Msa0051440:CDS |
| CCAAGCACCACCGTCAGTTC+AGG | 0.456536 | 1_2:+5535109 | Msa0051440:CDS |
| ATGTGCTCAGCCGAAGCATC+GGG | 0.457152 | 1_2:+5537965 | Msa0051440:CDS |
| TGAGGTGGTGGTCCCGGTGG+CGG | 0.457958 | 1_2:-5535134 | None:intergenic |
| TCTGCTGATTGTAACACAAC+AGG | 0.459246 | 1_2:+5536815 | Msa0051440:CDS |
| CACAATTGCCTTGTAAGATA+TGG | 0.463208 | 1_2:+5539425 | Msa0051440:three_prime_UTR |
| ACTATTATTGCCACAGTTGG+TGG | 0.463983 | 1_2:-5539195 | None:intergenic |
| TACACAATTAGAACAATTCA+AGG | 0.469316 | 1_2:+5536371 | Msa0051440:CDS |
| AGTTGGTGGAGATGAGAATA+TGG | 0.469785 | 1_2:-5539181 | None:intergenic |
| ATGCTGATTGAAGGCATTTG+TGG | 0.474680 | 1_2:+5538095 | Msa0051440:CDS |
| TTGCAAATAACAATTCCATA+AGG | 0.480068 | 1_2:+5538811 | Msa0051440:CDS |
| GTCAGTTCAGGCACCGCCAC+CGG | 0.482612 | 1_2:+5535121 | Msa0051440:CDS |
| GTGGTATGTGTGGTTGGACT+CGG | 0.482699 | 1_2:+5536630 | Msa0051440:CDS |
| TATCTCCTGCAGCTGCTACT+GGG | 0.483276 | 1_2:+5538772 | Msa0051440:intron |
| TCACCTGAAGCCCGATGCTT+CGG | 0.483967 | 1_2:-5537975 | None:intergenic |
| CTGAGCACATGTGCCGGAGG+GGG | 0.486945 | 1_2:-5537952 | None:intergenic |
| GTACTTTCTTCGCCGCAGCC+AGG | 0.487390 | 1_2:+5537914 | Msa0051440:CDS |
| GGCATTAGCATGCTGATTGA+AGG | 0.489200 | 1_2:+5538086 | Msa0051440:CDS |
| ATCACTTGCTTTCTATCTAC+CGG | 0.489632 | 1_2:+5536011 | Msa0051440:CDS |
| CTAACTGGACCATGACCATC+AGG | 0.492436 | 1_2:-5538906 | None:intergenic |
| CATGTGCTCAGCCGAAGCAT+CGG | 0.494578 | 1_2:+5537964 | Msa0051440:CDS |
| GTTTGGCACCATATCTTACA+AGG | 0.495350 | 1_2:-5539433 | None:intergenic |
| TCAACACATTGCTTCAGACT+TGG | 0.504520 | 1_2:+5535956 | Msa0051440:CDS |
| CGGCTGAGCACATGTGCCGG+AGG | 0.507745 | 1_2:-5537955 | None:intergenic |
| AAATTCTGAGGTGGTGGTCC+CGG | 0.508298 | 1_2:-5535140 | None:intergenic |
| AGCTGAAGAAGCTGTTCCGC+TGG | 0.512891 | 1_2:-5535191 | None:intergenic |
| TGCACCAGAAAGCCTGGCTG+CGG | 0.513047 | 1_2:-5537926 | None:intergenic |
| CAGTTAGAACCAATGGTGGA+TGG | 0.514008 | 1_2:+5538922 | Msa0051440:CDS |
| TCCCATTGTCATTGTACCTG+TGG | 0.514468 | 1_2:+5536611 | Msa0051440:CDS |
| GGCTGAGCACATGTGCCGGA+GGG | 0.515040 | 1_2:-5537954 | None:intergenic |
| CTTCGGCTGAGCACATGTGC+CGG | 0.519002 | 1_2:-5537958 | None:intergenic |
| TAGGAATATATTCAGACAAA+CGG | 0.520368 | 1_2:-5539344 | None:intergenic |
| CTTGGTGGTTATCTGTGTCA+TGG | 0.520942 | 1_2:-5535091 | None:intergenic |
| TATTCCTAGTAGATTTCTCT+AGG | 0.521140 | 1_2:+5539359 | Msa0051440:CDS |
| ACCACAGGTACAATGACAAT+GGG | 0.521905 | 1_2:-5536612 | None:intergenic |
| TGGACTCGGTCTGTTCGCGA+GGG | 0.523642 | 1_2:+5536644 | Msa0051440:CDS |
| TGCTACATACCATGGTGCAC+GGG | 0.526388 | 1_2:-5537092 | None:intergenic |
| GAACTGACGGTGGTGCTTGG+TGG | 0.527613 | 1_2:-5535106 | None:intergenic |
| AGCAACCTTGTACCTCAAAT+GGG | 0.529370 | 1_2:+5535704 | Msa0051440:CDS |
| AGTCATGTCTTTGGGATGAT+GGG | 0.533189 | 1_2:+5537497 | Msa0051440:CDS |
| TTGCTACATACCATGGTGCA+CGG | 0.537859 | 1_2:-5537093 | None:intergenic |
| TTTGAAGCACCTTCATGCTA+AGG | 0.538653 | 1_2:+5536922 | Msa0051440:CDS |
| GTGACTTACCCATCCACCAT+TGG | 0.539247 | 1_2:-5538931 | None:intergenic |
| CATGACTAGCTTTGAATATG+GGG | 0.540448 | 1_2:-5537481 | None:intergenic |
| GTTCGCGAGGGGCTTTCCAA+TGG | 0.542911 | 1_2:+5536656 | Msa0051440:CDS |
| ACCATGGTGCACGGGTCAGA+AGG | 0.543944 | 1_2:-5537084 | None:intergenic |
| ACAATCAGCAGAAGGAGCAT+AGG | 0.544491 | 1_2:-5536804 | None:intergenic |
| TTGGACTCGGTCTGTTCGCG+AGG | 0.546006 | 1_2:+5536643 | Msa0051440:CDS |
| CAACTGTGGCAATAATAGTT+GGG | 0.546683 | 1_2:+5539199 | Msa0051440:CDS |
| CATGGTCCAGTTAGAACCAA+TGG | 0.547851 | 1_2:+5538915 | Msa0051440:CDS |
| TCCCACCCATTTGAGGTACA+AGG | 0.549191 | 1_2:-5535709 | None:intergenic |
| AGTCCAAAATTCTGAGGTGG+TGG | 0.551027 | 1_2:-5535146 | None:intergenic |
| GTACCTGTGGTATGTGTGGT+TGG | 0.555163 | 1_2:+5536624 | Msa0051440:CDS |
| GCTGAGCACATGTGCCGGAG+GGG | 0.557764 | 1_2:-5537953 | None:intergenic |
| AGGCTTCCGGTGATTATGGG+TGG | 0.559262 | 1_2:+5535988 | Msa0051440:CDS |
| ATATCTTCCTTGGATATAGT+AGG | 0.561320 | 1_2:+5536420 | Msa0051440:CDS |
| TATTCCTAGAGAAATCTACT+AGG | 0.561420 | 1_2:-5539363 | None:intergenic |
| TCCTTGGATATAGTAGGACA+TGG | 0.564119 | 1_2:+5536426 | Msa0051440:CDS |
| AACGCCATGAAGGATTTGAA+TGG | 0.564370 | 1_2:-5535226 | None:intergenic |
| GTACCCCACTGAAATGGGTA+TGG | 0.565676 | 1_2:-5537458 | None:intergenic |
| AGCGGCGAAAGCCCAAATAA+CGG | 0.565764 | 1_2:-5536987 | None:intergenic |
| CCAACTATTATTGCCACAGT+TGG | 0.566946 | 1_2:-5539198 | None:intergenic |
| TATGATGAGCCTTAGCATGA+AGG | 0.568732 | 1_2:-5536931 | None:intergenic |
| ATGTTCCATACCCATTTCAG+TGG | 0.568754 | 1_2:+5537453 | Msa0051440:CDS |
| TCAGTTCAGGCACCGCCACC+GGG | 0.569461 | 1_2:+5535122 | Msa0051440:CDS |
| AGTTAGAACCAATGGTGGAT+GGG | 0.570107 | 1_2:+5538923 | Msa0051440:CDS |
| GGTGGCGGTGCCTGAACTGA+CGG | 0.570549 | 1_2:-5535119 | None:intergenic |
| ACCTTGTACCTCAAATGGGT+GGG | 0.574764 | 1_2:+5535708 | Msa0051440:CDS |
| AAAAGATACTAACGCCATGA+AGG | 0.576140 | 1_2:-5535236 | None:intergenic |
| GGTTCCTTTCCAGAAAAGGA+AGG | 0.579848 | 1_2:+5539284 | Msa0051440:CDS |
| TGTATGCACCAGCAACGGTA+AGG | 0.580085 | 1_2:-5537012 | None:intergenic |
| TGTTCCATACCCATTTCAGT+GGG | 0.582233 | 1_2:+5537454 | Msa0051440:CDS |
| AACCTTGTACCTCAAATGGG+TGG | 0.584925 | 1_2:+5535707 | Msa0051440:CDS |
| TTCTGGAAAGGAACCCACCA+TGG | 0.587333 | 1_2:-5539276 | None:intergenic |
| TTCTGAGGTGGTGGTCCCGG+TGG | 0.588875 | 1_2:-5535137 | None:intergenic |
| CCTTGGATATAGTAGGACAT+GGG | 0.589670 | 1_2:+5536427 | Msa0051440:CDS |
| CTTGCAGATTGTGTGCAGAT+CGG | 0.590049 | 1_2:+5536777 | Msa0051440:CDS |
| AGGCTCATCATATACTTGAG+AGG | 0.595130 | 1_2:+5536942 | Msa0051440:CDS |
| TACCACAGGTACAATGACAA+TGG | 0.595377 | 1_2:-5536613 | None:intergenic |
| CCCATGTCCTACTATATCCA+AGG | 0.596457 | 1_2:-5536427 | None:intergenic |
| TCATTTATGATCGACATCAC+CGG | 0.597681 | 1_2:-5536030 | None:intergenic |
| GGACTCGGTCTGTTCGCGAG+GGG | 0.599513 | 1_2:+5536645 | Msa0051440:CDS |
| TGGACAGAGGACTTCCATGG+TGG | 0.609884 | 1_2:+5539262 | Msa0051440:CDS |
| GGACAGAGGACTTCCATGGT+GGG | 0.611007 | 1_2:+5539263 | Msa0051440:CDS |
| AGTGATCCACCCATAATCAC+CGG | 0.611658 | 1_2:-5535994 | None:intergenic |
| CATTGTACCTGTGGTATGTG+TGG | 0.617786 | 1_2:+5536620 | Msa0051440:CDS |
| AGTATTGTATGCACCAGCAA+CGG | 0.621068 | 1_2:-5537017 | None:intergenic |
| GGCTGCGGCGAAGAAAGTAC+CGG | 0.621910 | 1_2:-5537911 | None:intergenic |
| CTTGAAAGTCCAAAATTCTG+AGG | 0.626530 | 1_2:-5535152 | None:intergenic |
| GTTCCTTTCCAGAAAAGGAA+GGG | 0.629131 | 1_2:+5539285 | Msa0051440:CDS |
| GGGTCCCACTTGGACTCCAG+CGG | 0.630127 | 1_2:+5535175 | Msa0051440:CDS |
| ATAGCAGCGAATATTGGGAG+AGG | 0.630706 | 1_2:-5538643 | None:intergenic |
| CTGTTCCGCTGGAGTCCAAG+TGG | 0.633722 | 1_2:-5535180 | None:intergenic |
| TAACGTTAAATAGAACAGCA+TGG | 0.634085 | 1_2:-5534717 | None:intergenic |
| CTGTGGACAGAGGACTTCCA+TGG | 0.638844 | 1_2:+5539259 | Msa0051440:CDS |
| ACCAGCAACGGTAAGGATAG+CGG | 0.639172 | 1_2:-5537005 | None:intergenic |
| GTCATGAACACTGCACCTGA+TGG | 0.642428 | 1_2:+5538891 | Msa0051440:CDS |
| GTGTTCATGACAAAATATTG+TGG | 0.643236 | 1_2:-5538879 | None:intergenic |
| TGTTCCGCTGGAGTCCAAGT+GGG | 0.644188 | 1_2:-5535179 | None:intergenic |
| CTTGGATATAGTAGGACATG+GGG | 0.644457 | 1_2:+5536428 | Msa0051440:CDS |
| GGTCCAGTTAGAACCAATGG+TGG | 0.646071 | 1_2:+5538918 | Msa0051440:CDS |
| ATTCTCATCTCCACCAACTG+TGG | 0.646273 | 1_2:+5539185 | Msa0051440:CDS |
| AATTGAGATCCCGAGAAACA+AGG | 0.647055 | 1_2:-5538856 | None:intergenic |
| TGAAGCCAAACAAACAGCTG+TGG | 0.648330 | 1_2:+5539242 | Msa0051440:CDS |
| GAAAGTCCAAAATTCTGAGG+TGG | 0.648379 | 1_2:-5535149 | None:intergenic |
| ACCTTCTGACCCGTGCACCA+TGG | 0.650262 | 1_2:+5537083 | Msa0051440:CDS |
| AGTCCAACCACACATACCAC+AGG | 0.653099 | 1_2:-5536627 | None:intergenic |
| AAACAAACAGCTGTGGACAG+AGG | 0.674809 | 1_2:+5539249 | Msa0051440:CDS |
| GTTGTGTTACAATCAGCAGA+AGG | 0.677477 | 1_2:-5536812 | None:intergenic |
| AACACTGCACCTGATGGTCA+TGG | 0.680577 | 1_2:+5538897 | Msa0051440:CDS |
| ATGACTAGCTTTGAATATGG+GGG | 0.701834 | 1_2:-5537480 | None:intergenic |
| GGCGGTGCCTGAACTGACGG+TGG | 0.713228 | 1_2:-5535116 | None:intergenic |
| GTTCCATACCCATTTCAGTG+GGG | 0.714740 | 1_2:+5537455 | Msa0051440:CDS |
| ATATATTCAGACAAACGGAG+AGG | 0.715929 | 1_2:-5539339 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTATTTTTATTTTTT+TGG | + | chr1_2:5535557-5535576 | Msa0051440:intron | 0.0% |
| !!! | TTTTTTATTTTTATTTTTTT+GGG | + | chr1_2:5535558-5535577 | Msa0051440:intron | 0.0% |
| !! | TTAAAATAAAGAAAAAGAAA+CGG | - | chr1_2:5534913-5534932 | None:intergenic | 10.0% |
| !!! | AATTTTTTTTTTACAAGTTA+AGG | - | chr1_2:5535300-5535319 | None:intergenic | 10.0% |
| !!! | AATTGAAATTTTTAGAATTT+GGG | - | chr1_2:5536203-5536222 | None:intergenic | 10.0% |
| !!! | AAATTGAAATTTTTAGAATT+TGG | - | chr1_2:5536204-5536223 | None:intergenic | 10.0% |
| !! | AATTAAAAATACTAAGAATA+AGG | - | chr1_2:5537562-5537581 | None:intergenic | 10.0% |
| !! | TTCAATGAAAAAAAAAAGTT+TGG | - | chr1_2:5535018-5535037 | None:intergenic | 15.0% |
| !!! | TTTTTTAAAAAAAGTTGCTT+TGG | + | chr1_2:5535458-5535477 | Msa0051440:intron | 15.0% |
| !!! | GTTTATTAGTTAATATCTTT+TGG | + | chr1_2:5536519-5536538 | Msa0051440:intron | 15.0% |
| !!! | TTTCAAACTTTTATTATAGT+AGG | - | chr1_2:5536719-5536738 | None:intergenic | 15.0% |
| !! | ACTATAATAAAAGTTTGAAA+TGG | + | chr1_2:5536719-5536738 | Msa0051440:intron | 15.0% |
| !!! | TCTTAGTATTTTTAATTCTA+CGG | + | chr1_2:5537565-5537584 | Msa0051440:intron | 15.0% |
| !! | AATTAAGTTAATTCTTCAAA+TGG | - | chr1_2:5538016-5538035 | None:intergenic | 15.0% |
| !!! | TTAAATATTGATTATAGACA+TGG | + | chr1_2:5538339-5538358 | Msa0051440:intron | 15.0% |
| !! | AATTCTTAACAAATAATCAA+TGG | - | chr1_2:5538367-5538386 | None:intergenic | 15.0% |
| !! | TATATATGAAAATGACAAAA+GGG | - | chr1_2:5539021-5539040 | None:intergenic | 15.0% |
| !! | ATATATATGAAAATGACAAA+AGG | - | chr1_2:5539022-5539041 | None:intergenic | 15.0% |
| !!! | AAAAAGTACTCATGAAAAAA+AGG | - | chr1_2:5534853-5534872 | None:intergenic | 20.0% |
| !! | TGTGTGAGAAAAAAAAAAAA+TGG | + | chr1_2:5535067-5535086 | Msa0051440:exon | 20.0% |
| !! | GTGTGAGAAAAAAAAAAAAT+GGG | + | chr1_2:5535068-5535087 | Msa0051440:exon | 20.0% |
| !!! | GTAATTGTTGTTTTTTGTAA+CGG | + | chr1_2:5535804-5535823 | Msa0051440:intron | 20.0% |
| !! | ATGAAAACATATTGTGATTT+CGG | + | chr1_2:5536103-5536122 | Msa0051440:intron | 20.0% |
| !! | CAAACATATAAACTTATGTT+CGG | - | chr1_2:5536159-5536178 | None:intergenic | 20.0% |
| !! | ATAAGTTTATATGTTTGTAG+AGG | + | chr1_2:5536162-5536181 | Msa0051440:intron | 20.0% |
| !!! | AAATTTTTAGAATTTGGGTT+GGG | - | chr1_2:5536198-5536217 | None:intergenic | 20.0% |
| !! | TAGCAAAAGTAGTATATTTA+GGG | + | chr1_2:5537110-5537129 | Msa0051440:intron | 20.0% |
| !!! | CTTATGTATAAGCTATTTTT+AGG | - | chr1_2:5537324-5537343 | None:intergenic | 20.0% |
| !!! | ATTAAACTTTTTTTCCAAAC+AGG | + | chr1_2:5537352-5537371 | Msa0051440:intron | 20.0% |
| !!! | AACAATTATGTTTTTATTCC+AGG | + | chr1_2:5537426-5537445 | Msa0051440:intron | 20.0% |
| !!! | ATGATTTTATGCTCTATTTT+TGG | + | chr1_2:5538499-5538518 | Msa0051440:intron | 20.0% |
| !! | ATAATTTAATGTGCATGTAA+TGG | - | chr1_2:5538708-5538727 | None:intergenic | 20.0% |
| !!! | ATAAGGAATATCTATGTTTT+CGG | + | chr1_2:5538828-5538847 | Msa0051440:CDS | 20.0% |
| !! | TATATATTAAGAAAAGTAGC+CGG | + | chr1_2:5539035-5539054 | Msa0051440:intron | 20.0% |
| !! | ATATATGAAATCAACCAAAA+CGG | - | chr1_2:5539104-5539123 | None:intergenic | 20.0% |
| ! | AAAAAAAGGACCAGTTATTA+AGG | - | chr1_2:5534839-5534858 | None:intergenic | 25.0% |
| !!! | TTTTTCATGAGTACTTTTTC+TGG | + | chr1_2:5534854-5534873 | Msa0051440:five_prime_UTR | 25.0% |
| ! | AAAGAAAAAGAAACGGTTAT+GGG | - | chr1_2:5534906-5534925 | None:intergenic | 25.0% |
| ! | TAAAGAAAAAGAAACGGTTA+TGG | - | chr1_2:5534907-5534926 | None:intergenic | 25.0% |
| !!! | ATGTTAGTATTGCTAGTTTT+TGG | + | chr1_2:5535830-5535849 | Msa0051440:intron | 25.0% |
| ! | ACAATAACAACAACAAAATC+AGG | - | chr1_2:5535883-5535902 | None:intergenic | 25.0% |
| ! | GTCTCTCATTATATGAAATA+AGG | + | chr1_2:5536132-5536151 | Msa0051440:intron | 25.0% |
| !!! | AATTTTTAGAATTTGGGTTG+GGG | - | chr1_2:5536197-5536216 | None:intergenic | 25.0% |
| !!! | GAAATTTTTAGAATTTGGGT+TGG | - | chr1_2:5536199-5536218 | None:intergenic | 25.0% |
| !! | TTGAATCACCAATTTTATGT+TGG | - | chr1_2:5536309-5536328 | None:intergenic | 25.0% |
| ! | TACACAATTAGAACAATTCA+AGG | + | chr1_2:5536371-5536390 | Msa0051440:CDS | 25.0% |
| !! | TTTCTCTCTTTATCATCTTT+TGG | + | chr1_2:5536551-5536570 | Msa0051440:intron | 25.0% |
| !!! | TTTTTTTCTCTTTCTTTACC+AGG | + | chr1_2:5536580-5536599 | Msa0051440:intron | 25.0% |
| ! | TATAGTAGGTAATTTATTCG+TGG | - | chr1_2:5536705-5536724 | None:intergenic | 25.0% |
| ! | AAACTCATAAGTGAATGTTT+CGG | - | chr1_2:5536854-5536873 | None:intergenic | 25.0% |
| !! | ACTTATTTGAGTCTTTTCTT+TGG | - | chr1_2:5537044-5537063 | None:intergenic | 25.0% |
| ! | GTAGCAAAAGTAGTATATTT+AGG | + | chr1_2:5537109-5537128 | Msa0051440:intron | 25.0% |
| !! | TAGTATATTTAGGGTCTATT+TGG | + | chr1_2:5537119-5537138 | Msa0051440:intron | 25.0% |
| ! | ATCAACAATAATGGTAGTAT+AGG | - | chr1_2:5537823-5537842 | None:intergenic | 25.0% |
| ! | AACTGATGATCTAATTAATC+TGG | + | chr1_2:5537855-5537874 | Msa0051440:intron | 25.0% |
| !! | CTTGTAACTTTTGTGATATA+GGG | + | chr1_2:5538065-5538084 | Msa0051440:intron | 25.0% |
| ! | AAAAAATGTGAATTTGCCAA+TGG | - | chr1_2:5538271-5538290 | None:intergenic | 25.0% |
| ! | TATTTAACCAAATAAAACCC+AGG | - | chr1_2:5538326-5538345 | None:intergenic | 25.0% |
| ! | GATAATTGTAGTGAAAATGT+CGG | + | chr1_2:5538418-5538437 | Msa0051440:intron | 25.0% |
| ! | ATTACACTTCAATTCTTGTT+TGG | + | chr1_2:5538530-5538549 | Msa0051440:intron | 25.0% |
| ! | TAAGTAACATTTAAGTGCAA+TGG | - | chr1_2:5538562-5538581 | None:intergenic | 25.0% |
| ! | AAATTTACCTGAAATAGACA+TGG | - | chr1_2:5538602-5538621 | None:intergenic | 25.0% |
| !! | ATGTCTATTTCAGGTAAATT+TGG | + | chr1_2:5538601-5538620 | Msa0051440:intron | 25.0% |
| !!! | GCTATATACTGTGTTTTATT+CGG | + | chr1_2:5538661-5538680 | Msa0051440:CDS | 25.0% |
| ! | GATAGAGAGATAATTGTATA+AGG | - | chr1_2:5538756-5538775 | None:intergenic | 25.0% |
| ! | TTGCAAATAACAATTCCATA+AGG | + | chr1_2:5538811-5538830 | Msa0051440:CDS | 25.0% |
| ! | GAAAACATAGATATTCCTTA+TGG | - | chr1_2:5538829-5538848 | None:intergenic | 25.0% |
| !! | ATGTTACTAAAATACCGTTT+TGG | + | chr1_2:5539087-5539106 | Msa0051440:intron | 25.0% |
| ! | TAGGAATATATTCAGACAAA+CGG | - | chr1_2:5539347-5539366 | None:intergenic | 25.0% |
| !! | TGCCAAACAATTTTCATTTT+AGG | + | chr1_2:5539448-5539467 | Msa0051440:three_prime_UTR | 25.0% |
| ! | TGCCTAAAATGAAAATTGTT+TGG | - | chr1_2:5539453-5539472 | None:intergenic | 25.0% |
| !! | ATTAGTAGCCAAATTTTATC+TGG | + | chr1_2:5539473-5539492 | Msa0051440:three_prime_UTR | 25.0% |
| !! | TTAGTAGCCAAATTTTATCT+GGG | + | chr1_2:5539474-5539493 | Msa0051440:three_prime_UTR | 25.0% |
| ! | AATTTACCCCAGATAAAATT+TGG | - | chr1_2:5539484-5539503 | None:intergenic | 25.0% |
| AACGTAGTAACCTTAATAAC+TGG | + | chr1_2:5534826-5534845 | Msa0051440:five_prime_UTR | 30.0% | |
| ! | TCAGAATTTTGGACTTTCAA+GGG | + | chr1_2:5535154-5535173 | Msa0051440:CDS | 30.0% |
| GATCACTTGATGAAAAAGAT+TGG | + | chr1_2:5535752-5535771 | Msa0051440:intron | 30.0% | |
| !!! | GTATTGCTAGTTTTTGGTAA+TGG | + | chr1_2:5535836-5535855 | Msa0051440:intron | 30.0% |
| !! | TATTGTTTTGTAGCACGATA+AGG | + | chr1_2:5535897-5535916 | Msa0051440:intron | 30.0% |
| AGTTTATATGTTTGTAGAGG+TGG | + | chr1_2:5536165-5536184 | Msa0051440:intron | 30.0% | |
| TGCTTTGTCCAACATAAAAT+TGG | + | chr1_2:5536298-5536317 | Msa0051440:intron | 30.0% | |
| ! | TCTTTTGTCAATATCTTCCT+TGG | + | chr1_2:5536410-5536429 | Msa0051440:CDS | 30.0% |
| ATATCTTCCTTGGATATAGT+AGG | + | chr1_2:5536420-5536439 | Msa0051440:CDS | 30.0% | |
| ! | ACAACAACCTTTTACATTTC+CGG | + | chr1_2:5536889-5536908 | Msa0051440:intron | 30.0% |
| AATACGCTGAAAACAACTTA+TGG | - | chr1_2:5537227-5537246 | None:intergenic | 30.0% | |
| AACTTGGAACAGTTAAATTG+AGG | - | chr1_2:5537379-5537398 | None:intergenic | 30.0% | |
| TCAGAAAGAGAATTTGAACT+TGG | - | chr1_2:5537395-5537414 | None:intergenic | 30.0% | |
| !! | ACATGACTAGCTTTGAATAT+GGG | - | chr1_2:5537485-5537504 | None:intergenic | 30.0% |
| AAGTTTCTACATGTCATATC+TGG | - | chr1_2:5537634-5537653 | None:intergenic | 30.0% | |
| TTTAATGTAGCTACATGTGT+CGG | + | chr1_2:5537675-5537694 | Msa0051440:intron | 30.0% | |
| ! | AATTTTACAGCTTCATTCTC+TGG | + | chr1_2:5537774-5537793 | Msa0051440:intron | 30.0% |
| TAACAACGGATCAACAATAA+TGG | - | chr1_2:5537832-5537851 | None:intergenic | 30.0% | |
| ! | GATCATCAGTTTGATAACAA+CGG | - | chr1_2:5537846-5537865 | None:intergenic | 30.0% |
| ! | AAATTTTGAATGCAGTCAAC+CGG | + | chr1_2:5537892-5537911 | Msa0051440:intron | 30.0% |
| CCTATATCACAAAAGTTACA+AGG | - | chr1_2:5538067-5538086 | None:intergenic | 30.0% | |
| ! | CCTTGTAACTTTTGTGATAT+AGG | + | chr1_2:5538064-5538083 | Msa0051440:intron | 30.0% |
| ! | TTATGTTTAGTGTTCTGAGT+AGG | + | chr1_2:5538180-5538199 | Msa0051440:intron | 30.0% |
| ! | GATTTTTCCATGTCTATTTC+AGG | + | chr1_2:5538592-5538611 | Msa0051440:intron | 30.0% |
| AGTATATAGCAGCGAATATT+GGG | - | chr1_2:5538651-5538670 | None:intergenic | 30.0% | |
| ATTTAATGTGCATGTAATGG+TGG | - | chr1_2:5538705-5538724 | None:intergenic | 30.0% | |
| GTGTTCATGACAAAATATTG+TGG | - | chr1_2:5538882-5538901 | None:intergenic | 30.0% | |
| ACAAAAGGGACTTGTAAAAA+GGG | - | chr1_2:5539007-5539026 | None:intergenic | 30.0% | |
| AATAGACACGATAAATACAC+CGG | - | chr1_2:5539057-5539076 | None:intergenic | 30.0% | |
| TATTCCTAGTAGATTTCTCT+AGG | + | chr1_2:5539359-5539378 | Msa0051440:CDS | 30.0% | |
| TATTCCTAGAGAAATCTACT+AGG | - | chr1_2:5539366-5539385 | None:intergenic | 30.0% | |
| GCAATTGTGCTCATTAAATT+AGG | - | chr1_2:5539414-5539433 | None:intergenic | 30.0% | |
| ! | TAGTAGCCAAATTTTATCTG+GGG | + | chr1_2:5539475-5539494 | Msa0051440:three_prime_UTR | 30.0% |
| CTTGAAAGTCCAAAATTCTG+AGG | - | chr1_2:5535155-5535174 | None:intergenic | 35.0% | |
| ! | CTCAGAATTTTGGACTTTCA+AGG | + | chr1_2:5535153-5535172 | Msa0051440:CDS | 35.0% |
| ! | CAGAATTTTGGACTTTCAAG+GGG | + | chr1_2:5535155-5535174 | Msa0051440:CDS | 35.0% |
| AAAAGATACTAACGCCATGA+AGG | - | chr1_2:5535239-5535258 | None:intergenic | 35.0% | |
| !!! | TGCTAGTTTTTGGTAATGGT+AGG | + | chr1_2:5535840-5535859 | Msa0051440:intron | 35.0% |
| !!! | GCTAGTTTTTGGTAATGGTA+GGG | + | chr1_2:5535841-5535860 | Msa0051440:intron | 35.0% |
| CAGACATAAACAACAATGTC+TGG | - | chr1_2:5535933-5535952 | None:intergenic | 35.0% | |
| !! | CAGACATTGTTGTTTATGTC+TGG | + | chr1_2:5535931-5535950 | Msa0051440:CDS | 35.0% |
| ATCACTTGCTTTCTATCTAC+CGG | + | chr1_2:5536011-5536030 | Msa0051440:CDS | 35.0% | |
| TCATTTATGATCGACATCAC+CGG | - | chr1_2:5536033-5536052 | None:intergenic | 35.0% | |
| TTATCTGCATTGCCGTTATT+TGG | + | chr1_2:5536975-5536994 | Msa0051440:CDS | 35.0% | |
| TATCTGCATTGCCGTTATTT+GGG | + | chr1_2:5536976-5536995 | Msa0051440:CDS | 35.0% | |
| !! | ACTACTTTTGCTACATACCA+TGG | - | chr1_2:5537103-5537122 | None:intergenic | 35.0% |
| GAAAACAACTTATGGACATG+AGG | - | chr1_2:5537219-5537238 | None:intergenic | 35.0% | |
| AGTTAAATTGAGGTCCTGTT+TGG | - | chr1_2:5537369-5537388 | None:intergenic | 35.0% | |
| !! | ATGACTAGCTTTGAATATGG+GGG | - | chr1_2:5537483-5537502 | None:intergenic | 35.0% |
| !! | CATGACTAGCTTTGAATATG+GGG | - | chr1_2:5537484-5537503 | None:intergenic | 35.0% |
| !! | GACATGACTAGCTTTGAATA+TGG | - | chr1_2:5537486-5537505 | None:intergenic | 35.0% |
| TTCAAAGCTAGTCATGTCTT+TGG | + | chr1_2:5537488-5537507 | Msa0051440:CDS | 35.0% | |
| TCAAAGCTAGTCATGTCTTT+GGG | + | chr1_2:5537489-5537508 | Msa0051440:CDS | 35.0% | |
| TATGTAGCACTTCAGATCAA+AGG | - | chr1_2:5537736-5537755 | None:intergenic | 35.0% | |
| CAATGGTATAACTAGACACT+AGG | - | chr1_2:5538254-5538273 | None:intergenic | 35.0% | |
| CTAGTGTCTAGTTATACCAT+TGG | + | chr1_2:5538252-5538271 | Msa0051440:intron | 35.0% | |
| CAGTATATAGCAGCGAATAT+TGG | - | chr1_2:5538652-5538671 | None:intergenic | 35.0% | |
| !! | TGTGTTTTATTCGGCATTGT+CGG | + | chr1_2:5538670-5538689 | Msa0051440:CDS | 35.0% |
| GACAAAAGGGACTTGTAAAA+AGG | - | chr1_2:5539008-5539027 | None:intergenic | 35.0% | |
| CAACTGTGGCAATAATAGTT+GGG | + | chr1_2:5539199-5539218 | Msa0051440:CDS | 35.0% | |
| ATATATTCAGACAAACGGAG+AGG | - | chr1_2:5539342-5539361 | None:intergenic | 35.0% | |
| CACAATTGCCTTGTAAGATA+TGG | + | chr1_2:5539425-5539444 | Msa0051440:three_prime_UTR | 35.0% | |
| ! | GAAAGTCCAAAATTCTGAGG+TGG | - | chr1_2:5535152-5535171 | None:intergenic | 40.0% |
| GCATCCATTCAAATCCTTCA+TGG | + | chr1_2:5535222-5535241 | Msa0051440:CDS | 40.0% | |
| AACGCCATGAAGGATTTGAA+TGG | - | chr1_2:5535229-5535248 | None:intergenic | 40.0% | |
| AAGCAACCTTGTACCTCAAA+TGG | + | chr1_2:5535703-5535722 | Msa0051440:CDS | 40.0% | |
| AGCAACCTTGTACCTCAAAT+GGG | + | chr1_2:5535704-5535723 | Msa0051440:CDS | 40.0% | |
| TCAACACATTGCTTCAGACT+TGG | + | chr1_2:5535956-5535975 | Msa0051440:CDS | 40.0% | |
| ! | ACATTGCTTCAGACTTGGTT+TGG | + | chr1_2:5535961-5535980 | Msa0051440:CDS | 40.0% |
| !! | TTCAGACTTGGTTTGGTTCA+AGG | + | chr1_2:5535968-5535987 | Msa0051440:CDS | 40.0% |
| GATTCTCAGATGCGAAAGTT+TGG | - | chr1_2:5536065-5536084 | None:intergenic | 40.0% | |
| AACTTTCGCATCTGAGAATC+AGG | + | chr1_2:5536065-5536084 | Msa0051440:CDS | 40.0% | |
| ACGTGTGGTTTATGCTTGTT+TGG | + | chr1_2:5536258-5536277 | Msa0051440:intron | 40.0% | |
| TATGACACTTGCACTTGTAG+AGG | + | chr1_2:5536342-5536361 | Msa0051440:intron | 40.0% | |
| TCCTTGGATATAGTAGGACA+TGG | + | chr1_2:5536426-5536445 | Msa0051440:CDS | 40.0% | |
| CCTTGGATATAGTAGGACAT+GGG | + | chr1_2:5536427-5536446 | Msa0051440:CDS | 40.0% | |
| CTTGGATATAGTAGGACATG+GGG | + | chr1_2:5536428-5536447 | Msa0051440:CDS | 40.0% | |
| ACCACAGGTACAATGACAAT+GGG | - | chr1_2:5536615-5536634 | None:intergenic | 40.0% | |
| TACCACAGGTACAATGACAA+TGG | - | chr1_2:5536616-5536635 | None:intergenic | 40.0% | |
| GTCGCACAAATACTTACCAT+TGG | - | chr1_2:5536675-5536694 | None:intergenic | 40.0% | |
| GTTGTGTTACAATCAGCAGA+AGG | - | chr1_2:5536815-5536834 | None:intergenic | 40.0% | |
| ! | TCTGCTGATTGTAACACAAC+AGG | + | chr1_2:5536815-5536834 | Msa0051440:CDS | 40.0% |
| ! | TTTGAAGCACCTTCATGCTA+AGG | + | chr1_2:5536922-5536941 | Msa0051440:CDS | 40.0% |
| TATGATGAGCCTTAGCATGA+AGG | - | chr1_2:5536934-5536953 | None:intergenic | 40.0% | |
| AGGCTCATCATATACTTGAG+AGG | + | chr1_2:5536942-5536961 | Msa0051440:CDS | 40.0% | |
| AGTATTGTATGCACCAGCAA+CGG | - | chr1_2:5537020-5537039 | None:intergenic | 40.0% | |
| TACTGACATAAGCACTTGTG+TGG | + | chr1_2:5537163-5537182 | Msa0051440:intron | 40.0% | |
| CGTATTTCCATAAGCTCTCT+AGG | + | chr1_2:5537241-5537260 | Msa0051440:intron | 40.0% | |
| AAGCTATCCTAGAGAGCTTA+TGG | - | chr1_2:5537251-5537270 | None:intergenic | 40.0% | |
| TGGGTATGGAACATAAATCC+TGG | - | chr1_2:5537447-5537466 | None:intergenic | 40.0% | |
| ATGTTCCATACCCATTTCAG+TGG | + | chr1_2:5537453-5537472 | Msa0051440:CDS | 40.0% | |
| TGTTCCATACCCATTTCAGT+GGG | + | chr1_2:5537454-5537473 | Msa0051440:CDS | 40.0% | |
| !! | TAGTCATGTCTTTGGGATGA+TGG | + | chr1_2:5537496-5537515 | Msa0051440:CDS | 40.0% |
| !! | AGTCATGTCTTTGGGATGAT+GGG | + | chr1_2:5537497-5537516 | Msa0051440:CDS | 40.0% |
| !! | ATGCTGATTGAAGGCATTTG+TGG | + | chr1_2:5538095-5538114 | Msa0051440:CDS | 40.0% |
| AGTAGGAGTGAACATGGAAA+GGG | + | chr1_2:5538197-5538216 | Msa0051440:intron | 40.0% | |
| GTGAACATGGAAAGGGTTAT+AGG | + | chr1_2:5538204-5538223 | Msa0051440:intron | 40.0% | |
| AACATGGAAAGGGTTATAGG+TGG | + | chr1_2:5538207-5538226 | Msa0051440:intron | 40.0% | |
| ATGGAAATAGCAGTGGAGTA+TGG | - | chr1_2:5538297-5538316 | None:intergenic | 40.0% | |
| AATAAAACCCAGGTTGTGCA+TGG | - | chr1_2:5538316-5538335 | None:intergenic | 40.0% | |
| !!! | TGCACAACCTGGGTTTTATT+TGG | + | chr1_2:5538316-5538335 | Msa0051440:intron | 40.0% |
| AGTGAAAATGTCGGTCTACT+CGG | + | chr1_2:5538427-5538446 | Msa0051440:intron | 40.0% | |
| GAGAGGAATTGATGCGAAAA+AGG | - | chr1_2:5538629-5538648 | None:intergenic | 40.0% | |
| ! | TTTTATTCGGCATTGTCGGT+AGG | + | chr1_2:5538674-5538693 | Msa0051440:intron | 40.0% |
| ! | TTCGGCTTAACCTTGTTTCT+CGG | + | chr1_2:5538846-5538865 | Msa0051440:CDS | 40.0% |
| AATTGAGATCCCGAGAAACA+AGG | - | chr1_2:5538859-5538878 | None:intergenic | 40.0% | |
| !! | AGTTAGAACCAATGGTGGAT+GGG | + | chr1_2:5538923-5538942 | Msa0051440:CDS | 40.0% |
| !!! | GTACCTTGTCTTGTTTTGTG+TGG | + | chr1_2:5539133-5539152 | Msa0051440:intron | 40.0% |
| TTGCCACACAAAACAAGACA+AGG | - | chr1_2:5539139-5539158 | None:intergenic | 40.0% | |
| !! | AGTTGGTGGAGATGAGAATA+TGG | - | chr1_2:5539184-5539203 | None:intergenic | 40.0% |
| ACTATTATTGCCACAGTTGG+TGG | - | chr1_2:5539198-5539217 | None:intergenic | 40.0% | |
| CCAACTATTATTGCCACAGT+TGG | - | chr1_2:5539201-5539220 | None:intergenic | 40.0% | |
| CCAACTGTGGCAATAATAGT+TGG | + | chr1_2:5539198-5539217 | Msa0051440:CDS | 40.0% | |
| GTTCCTTTCCAGAAAAGGAA+GGG | + | chr1_2:5539285-5539304 | Msa0051440:CDS | 40.0% | |
| ! | TAACATCTCCCTTCCTTTTC+TGG | - | chr1_2:5539296-5539315 | None:intergenic | 40.0% |
| GTTTGGCACCATATCTTACA+AGG | - | chr1_2:5539436-5539455 | None:intergenic | 40.0% | |
| ! | CTTGGTGGTTATCTGTGTCA+TGG | - | chr1_2:5535094-5535113 | None:intergenic | 45.0% |
| !! | AGTCCAAAATTCTGAGGTGG+TGG | - | chr1_2:5535149-5535168 | None:intergenic | 45.0% |
| !!! | TGCAGCTGAAGCATTGCTTT+TGG | + | chr1_2:5535634-5535653 | Msa0051440:intron | 45.0% |
| CAGCACTACATTGTGATGCT+TGG | + | chr1_2:5535662-5535681 | Msa0051440:CDS | 45.0% | |
| AACCTTGTACCTCAAATGGG+TGG | + | chr1_2:5535707-5535726 | Msa0051440:CDS | 45.0% | |
| ACCTTGTACCTCAAATGGGT+GGG | + | chr1_2:5535708-5535727 | Msa0051440:CDS | 45.0% | |
| !! | TTGGTTTGGTTCAAGGCTTC+CGG | + | chr1_2:5535975-5535994 | Msa0051440:CDS | 45.0% |
| TTCAAGGCTTCCGGTGATTA+TGG | + | chr1_2:5535984-5536003 | Msa0051440:CDS | 45.0% | |
| TCAAGGCTTCCGGTGATTAT+GGG | + | chr1_2:5535985-5536004 | Msa0051440:CDS | 45.0% | |
| AGTGATCCACCCATAATCAC+CGG | - | chr1_2:5535997-5536016 | None:intergenic | 45.0% | |
| GTCAACTGAATTGCTACGTG+TGG | + | chr1_2:5536243-5536262 | Msa0051440:intron | 45.0% | |
| CCCATGTCCTACTATATCCA+AGG | - | chr1_2:5536430-5536449 | None:intergenic | 45.0% | |
| GACAATGGGACTAAACAACC+TGG | - | chr1_2:5536601-5536620 | None:intergenic | 45.0% | |
| TCCCATTGTCATTGTACCTG+TGG | + | chr1_2:5536611-5536630 | Msa0051440:CDS | 45.0% | |
| CATTGTACCTGTGGTATGTG+TGG | + | chr1_2:5536620-5536639 | Msa0051440:CDS | 45.0% | |
| CTTGCAGATTGTGTGCAGAT+CGG | + | chr1_2:5536777-5536796 | Msa0051440:CDS | 45.0% | |
| ! | ACAATCAGCAGAAGGAGCAT+AGG | - | chr1_2:5536807-5536826 | None:intergenic | 45.0% |
| TGCAGGACCGGAAATGTAAA+AGG | - | chr1_2:5536899-5536918 | None:intergenic | 45.0% | |
| TGCTTCAAATACTGCAGGAC+CGG | - | chr1_2:5536911-5536930 | None:intergenic | 45.0% | |
| !! | GAAGGTGCTTCAAATACTGC+AGG | - | chr1_2:5536916-5536935 | None:intergenic | 45.0% |
| TTGCTACATACCATGGTGCA+CGG | - | chr1_2:5537096-5537115 | None:intergenic | 45.0% | |
| GTTCCATACCCATTTCAGTG+GGG | + | chr1_2:5537455-5537474 | Msa0051440:CDS | 45.0% | |
| ! | AGCACTTGTCACTTCTTTCG+AGG | + | chr1_2:5537523-5537542 | Msa0051440:CDS | 45.0% |
| TGTCGGACACTAAGACATGT+TGG | + | chr1_2:5537698-5537717 | Msa0051440:intron | 45.0% | |
| ! | GGCATTAGCATGCTGATTGA+AGG | + | chr1_2:5538086-5538105 | Msa0051440:CDS | 45.0% |
| ! | GGCATTTGTGGCTCTATTGT+TGG | + | chr1_2:5538107-5538126 | Msa0051440:CDS | 45.0% |
| ! | GTTCTGAGTAGGAGTGAACA+TGG | + | chr1_2:5538191-5538210 | Msa0051440:intron | 45.0% |
| GAGTAGGAGTGAACATGGAA+AGG | + | chr1_2:5538196-5538215 | Msa0051440:intron | 45.0% | |
| TGGAAAGGGTTATAGGTGGA+AGG | + | chr1_2:5538211-5538230 | Msa0051440:intron | 45.0% | |
| GTTGTGCATGGAAATAGCAG+TGG | - | chr1_2:5538304-5538323 | None:intergenic | 45.0% | |
| !! | TGCTATTTCCATGCACAACC+TGG | + | chr1_2:5538305-5538324 | Msa0051440:intron | 45.0% |
| ! | GCTATTTCCATGCACAACCT+GGG | + | chr1_2:5538306-5538325 | Msa0051440:intron | 45.0% |
| TACTCGGTCTCACACACATA+GGG | + | chr1_2:5538443-5538462 | Msa0051440:intron | 45.0% | |
| AGAGTGGTGCAAATGTCATG+TGG | + | chr1_2:5538472-5538491 | Msa0051440:intron | 45.0% | |
| ATAGCAGCGAATATTGGGAG+AGG | - | chr1_2:5538646-5538665 | None:intergenic | 45.0% | |
| ! | TCGGCTTAACCTTGTTTCTC+GGG | + | chr1_2:5538847-5538866 | Msa0051440:CDS | 45.0% |
| CATGGTCCAGTTAGAACCAA+TGG | + | chr1_2:5538915-5538934 | Msa0051440:CDS | 45.0% | |
| !! | CATCCACCATTGGTTCTAAC+TGG | - | chr1_2:5538924-5538943 | None:intergenic | 45.0% |
| ! | CAGTTAGAACCAATGGTGGA+TGG | + | chr1_2:5538922-5538941 | Msa0051440:CDS | 45.0% |
| GGACTTGTAAAAAGGGACTG+AGG | - | chr1_2:5539000-5539019 | None:intergenic | 45.0% | |
| ATTCTCATCTCCACCAACTG+TGG | + | chr1_2:5539185-5539204 | Msa0051440:CDS | 45.0% | |
| TGAAGCCAAACAAACAGCTG+TGG | + | chr1_2:5539242-5539261 | Msa0051440:CDS | 45.0% | |
| TCTGTCCACAGCTGTTTGTT+TGG | - | chr1_2:5539250-5539269 | None:intergenic | 45.0% | |
| AAACAAACAGCTGTGGACAG+AGG | + | chr1_2:5539249-5539268 | Msa0051440:CDS | 45.0% | |
| GGTTCCTTTCCAGAAAAGGA+AGG | + | chr1_2:5539284-5539303 | Msa0051440:CDS | 45.0% | |
| !! | TCTCCCTTCCTTTTCTGGAA+AGG | - | chr1_2:5539291-5539310 | None:intergenic | 45.0% |
| !! | AAATTCTGAGGTGGTGGTCC+CGG | - | chr1_2:5535143-5535162 | None:intergenic | 50.0% |
| ! | GGACCACCACCTCAGAATTT+TGG | + | chr1_2:5535143-5535162 | Msa0051440:CDS | 50.0% |
| ! | TCCCACCCATTTGAGGTACA+AGG | - | chr1_2:5535712-5535731 | None:intergenic | 50.0% |
| ACATGACTCCCACCCATTTG+AGG | - | chr1_2:5535719-5535738 | None:intergenic | 50.0% | |
| GTACCTGTGGTATGTGTGGT+TGG | + | chr1_2:5536624-5536643 | Msa0051440:CDS | 50.0% | |
| AGTCCAACCACACATACCAC+AGG | - | chr1_2:5536630-5536649 | None:intergenic | 50.0% | |
| GTGGTATGTGTGGTTGGACT+CGG | + | chr1_2:5536630-5536649 | Msa0051440:CDS | 50.0% | |
| CACACAATCTGCAAGCTGCA+TGG | - | chr1_2:5536772-5536791 | None:intergenic | 50.0% | |
| AGCGGCGAAAGCCCAAATAA+CGG | - | chr1_2:5536990-5537009 | None:intergenic | 50.0% | |
| ACCAGCAACGGTAAGGATAG+CGG | - | chr1_2:5537008-5537027 | None:intergenic | 50.0% | |
| TGTATGCACCAGCAACGGTA+AGG | - | chr1_2:5537015-5537034 | None:intergenic | 50.0% | |
| TGCTACATACCATGGTGCAC+GGG | - | chr1_2:5537095-5537114 | None:intergenic | 50.0% | |
| GTACCCCACTGAAATGGGTA+TGG | - | chr1_2:5537461-5537480 | None:intergenic | 50.0% | |
| ! | GTAGCTACATGTGTCGGTGT+CGG | + | chr1_2:5537681-5537700 | Msa0051440:intron | 50.0% |
| CTACTCGGTCTCACACACAT+AGG | + | chr1_2:5538442-5538461 | Msa0051440:intron | 50.0% | |
| ACACATAGGGAGCAGAAGAG+TGG | + | chr1_2:5538456-5538475 | Msa0051440:intron | 50.0% | |
| TATCTCCTGCAGCTGCTACT+GGG | + | chr1_2:5538772-5538791 | Msa0051440:intron | 50.0% | |
| GTCATGAACACTGCACCTGA+TGG | + | chr1_2:5538891-5538910 | Msa0051440:CDS | 50.0% | |
| AACACTGCACCTGATGGTCA+TGG | + | chr1_2:5538897-5538916 | Msa0051440:CDS | 50.0% | |
| CTAACTGGACCATGACCATC+AGG | - | chr1_2:5538909-5538928 | None:intergenic | 50.0% | |
| GGTCCAGTTAGAACCAATGG+TGG | + | chr1_2:5538918-5538937 | Msa0051440:CDS | 50.0% | |
| GTGACTTACCCATCCACCAT+TGG | - | chr1_2:5538934-5538953 | None:intergenic | 50.0% | |
| ! | TTCTGGAAAGGAACCCACCA+TGG | - | chr1_2:5539279-5539298 | None:intergenic | 50.0% |
| ! | GGTGGGTTCCTTTCCAGAAA+AGG | + | chr1_2:5539280-5539299 | Msa0051440:CDS | 50.0% |
| GACTTTCAAGGGGTCCCACT+TGG | + | chr1_2:5535165-5535184 | Msa0051440:CDS | 55.0% | |
| TGTTCCGCTGGAGTCCAAGT+GGG | - | chr1_2:5535182-5535201 | None:intergenic | 55.0% | |
| AGCTGAAGAAGCTGTTCCGC+TGG | - | chr1_2:5535194-5535213 | None:intergenic | 55.0% | |
| AGGCTTCCGGTGATTATGGG+TGG | + | chr1_2:5535988-5536007 | Msa0051440:CDS | 55.0% | |
| GTGGCTGTTTGAGAGAGCTC+AGG | + | chr1_2:5537182-5537201 | Msa0051440:intron | 55.0% | |
| !! | TGGGGGTACCCCACTGAAAT+GGG | - | chr1_2:5537466-5537485 | None:intergenic | 55.0% |
| !! | ATGGGGGTACCCCACTGAAA+TGG | - | chr1_2:5537467-5537486 | None:intergenic | 55.0% |
| CATGTGCTCAGCCGAAGCAT+CGG | + | chr1_2:5537964-5537983 | Msa0051440:CDS | 55.0% | |
| ! | ATGTGCTCAGCCGAAGCATC+GGG | + | chr1_2:5537965-5537984 | Msa0051440:CDS | 55.0% |
| TCACCTGAAGCCCGATGCTT+CGG | - | chr1_2:5537978-5537997 | None:intergenic | 55.0% | |
| CTATCTCCTGCAGCTGCTAC+TGG | + | chr1_2:5538771-5538790 | Msa0051440:intron | 55.0% | |
| CTGTGGACAGAGGACTTCCA+TGG | + | chr1_2:5539259-5539278 | Msa0051440:CDS | 55.0% | |
| TGGACAGAGGACTTCCATGG+TGG | + | chr1_2:5539262-5539281 | Msa0051440:CDS | 55.0% | |
| GGACAGAGGACTTCCATGGT+GGG | + | chr1_2:5539263-5539282 | Msa0051440:CDS | 55.0% | |
| GAACTGACGGTGGTGCTTGG+TGG | - | chr1_2:5535109-5535128 | None:intergenic | 60.0% | |
| CCTGAACTGACGGTGGTGCT+TGG | - | chr1_2:5535112-5535131 | None:intergenic | 60.0% | |
| CCAAGCACCACCGTCAGTTC+AGG | + | chr1_2:5535109-5535128 | Msa0051440:CDS | 60.0% | |
| CTGTTCCGCTGGAGTCCAAG+TGG | - | chr1_2:5535183-5535202 | None:intergenic | 60.0% | |
| ! | TTGGACTCGGTCTGTTCGCG+AGG | + | chr1_2:5536643-5536662 | Msa0051440:CDS | 60.0% |
| ! | TGGACTCGGTCTGTTCGCGA+GGG | + | chr1_2:5536644-5536663 | Msa0051440:CDS | 60.0% |
| GTTCGCGAGGGGCTTTCCAA+TGG | + | chr1_2:5536656-5536675 | Msa0051440:CDS | 60.0% | |
| GCCGCTATCCTTACCGTTGC+TGG | + | chr1_2:5537004-5537023 | Msa0051440:CDS | 60.0% | |
| ACCTTCTGACCCGTGCACCA+TGG | + | chr1_2:5537083-5537102 | Msa0051440:CDS | 60.0% | |
| ACCATGGTGCACGGGTCAGA+AGG | - | chr1_2:5537087-5537106 | None:intergenic | 60.0% | |
| ! | GGCTGCGGCGAAGAAAGTAC+CGG | - | chr1_2:5537914-5537933 | None:intergenic | 60.0% |
| GTACTTTCTTCGCCGCAGCC+AGG | + | chr1_2:5537914-5537933 | Msa0051440:CDS | 60.0% | |
| TGCACCAGAAAGCCTGGCTG+CGG | - | chr1_2:5537929-5537948 | None:intergenic | 60.0% | |
| ! | GGGTGTTGCACCAGAAAGCC+TGG | - | chr1_2:5537935-5537954 | None:intergenic | 60.0% |
| TTCTGGTGCAACACCCCCTC+CGG | + | chr1_2:5537939-5537958 | Msa0051440:CDS | 60.0% | |
| CTTCGGCTGAGCACATGTGC+CGG | - | chr1_2:5537961-5537980 | None:intergenic | 60.0% | |
| GAGATCCCAGTAGCAGCTGC+AGG | - | chr1_2:5538780-5538799 | None:intergenic | 60.0% | |
| ! | GGTGGCGGTGCCTGAACTGA+CGG | - | chr1_2:5535122-5535141 | None:intergenic | 65.0% |
| ! | GTCAGTTCAGGCACCGCCAC+CGG | + | chr1_2:5535121-5535140 | Msa0051440:CDS | 65.0% |
| ! | TCAGTTCAGGCACCGCCACC+GGG | + | chr1_2:5535122-5535141 | Msa0051440:CDS | 65.0% |
| !! | TTCTGAGGTGGTGGTCCCGG+TGG | - | chr1_2:5535140-5535159 | None:intergenic | 65.0% |
| GGGTCCCACTTGGACTCCAG+CGG | + | chr1_2:5535175-5535194 | Msa0051440:CDS | 65.0% | |
| ! | GGACTCGGTCTGTTCGCGAG+GGG | + | chr1_2:5536645-5536664 | Msa0051440:CDS | 65.0% |
| TTCGCCGCAGCCAGGCTTTC+TGG | + | chr1_2:5537922-5537941 | Msa0051440:CDS | 65.0% | |
| CTGAGCACATGTGCCGGAGG+GGG | - | chr1_2:5537955-5537974 | None:intergenic | 65.0% | |
| GCTGAGCACATGTGCCGGAG+GGG | - | chr1_2:5537956-5537975 | None:intergenic | 65.0% | |
| GGCTGAGCACATGTGCCGGA+GGG | - | chr1_2:5537957-5537976 | None:intergenic | 65.0% | |
| !! | CAGCCGAAGCATCGGGCTTC+AGG | + | chr1_2:5537972-5537991 | Msa0051440:CDS | 65.0% |
| GGCGGTGCCTGAACTGACGG+TGG | - | chr1_2:5535119-5535138 | None:intergenic | 70.0% | |
| ! | TGAGGTGGTGGTCCCGGTGG+CGG | - | chr1_2:5535137-5535156 | None:intergenic | 70.0% |
| CGGCTGAGCACATGTGCCGG+AGG | - | chr1_2:5537958-5537977 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 5534720 | 5539565 | 5534720 | ID=Msa0051440;Name=Msa0051440 |
| chr1_2 | mRNA | 5534720 | 5539565 | 5534720 | ID=Msa0051440-mRNA-1;Parent=Msa0051440;Name=Msa0051440-mRNA-1;_AED=0.09;_eAED=0.09;_QI=366|0.91|0.92|1|1|1|13|185|513 |
| chr1_2 | exon | 5534720 | 5535245 | 5534720 | ID=Msa0051440-mRNA-1:exon:1657;Parent=Msa0051440-mRNA-1 |
| chr1_2 | exon | 5535639 | 5535736 | 5535639 | ID=Msa0051440-mRNA-1:exon:1658;Parent=Msa0051440-mRNA-1 |
| chr1_2 | exon | 5535910 | 5536086 | 5535910 | ID=Msa0051440-mRNA-1:exon:1659;Parent=Msa0051440-mRNA-1 |
| chr1_2 | exon | 5536362 | 5536462 | 5536362 | ID=Msa0051440-mRNA-1:exon:1660;Parent=Msa0051440-mRNA-1 |
| chr1_2 | exon | 5536602 | 5536677 | 5536602 | ID=Msa0051440-mRNA-1:exon:1661;Parent=Msa0051440-mRNA-1 |
| chr1_2 | exon | 5536777 | 5536836 | 5536777 | ID=Msa0051440-mRNA-1:exon:1662;Parent=Msa0051440-mRNA-1 |
| chr1_2 | exon | 5536920 | 5537104 | 5536920 | ID=Msa0051440-mRNA-1:exon:1663;Parent=Msa0051440-mRNA-1 |
| chr1_2 | exon | 5537448 | 5537544 | 5537448 | ID=Msa0051440-mRNA-1:exon:1664;Parent=Msa0051440-mRNA-1 |
| chr1_2 | exon | 5537907 | 5537993 | 5537907 | ID=Msa0051440-mRNA-1:exon:1665;Parent=Msa0051440-mRNA-1 |
| chr1_2 | exon | 5538086 | 5538128 | 5538086 | ID=Msa0051440-mRNA-1:exon:1666;Parent=Msa0051440-mRNA-1 |
| chr1_2 | exon | 5538614 | 5538691 | 5538614 | ID=Msa0051440-mRNA-1:exon:1667;Parent=Msa0051440-mRNA-1 |
| chr1_2 | exon | 5538784 | 5538944 | 5538784 | ID=Msa0051440-mRNA-1:exon:1668;Parent=Msa0051440-mRNA-1 |
| chr1_2 | exon | 5539162 | 5539565 | 5539162 | ID=Msa0051440-mRNA-1:exon:1669;Parent=Msa0051440-mRNA-1 |
| chr1_2 | five_prime_UTR | 5534720 | 5535085 | 5534720 | ID=Msa0051440-mRNA-1:five_prime_utr;Parent=Msa0051440-mRNA-1 |
| chr1_2 | CDS | 5535086 | 5535245 | 5535086 | ID=Msa0051440-mRNA-1:cds;Parent=Msa0051440-mRNA-1 |
| chr1_2 | CDS | 5535639 | 5535736 | 5535639 | ID=Msa0051440-mRNA-1:cds;Parent=Msa0051440-mRNA-1 |
| chr1_2 | CDS | 5535910 | 5536086 | 5535910 | ID=Msa0051440-mRNA-1:cds;Parent=Msa0051440-mRNA-1 |
| chr1_2 | CDS | 5536362 | 5536462 | 5536362 | ID=Msa0051440-mRNA-1:cds;Parent=Msa0051440-mRNA-1 |
| chr1_2 | CDS | 5536602 | 5536677 | 5536602 | ID=Msa0051440-mRNA-1:cds;Parent=Msa0051440-mRNA-1 |
| chr1_2 | CDS | 5536777 | 5536836 | 5536777 | ID=Msa0051440-mRNA-1:cds;Parent=Msa0051440-mRNA-1 |
| chr1_2 | CDS | 5536920 | 5537104 | 5536920 | ID=Msa0051440-mRNA-1:cds;Parent=Msa0051440-mRNA-1 |
| chr1_2 | CDS | 5537448 | 5537544 | 5537448 | ID=Msa0051440-mRNA-1:cds;Parent=Msa0051440-mRNA-1 |
| chr1_2 | CDS | 5537907 | 5537993 | 5537907 | ID=Msa0051440-mRNA-1:cds;Parent=Msa0051440-mRNA-1 |
| chr1_2 | CDS | 5538086 | 5538128 | 5538086 | ID=Msa0051440-mRNA-1:cds;Parent=Msa0051440-mRNA-1 |
| chr1_2 | CDS | 5538614 | 5538691 | 5538614 | ID=Msa0051440-mRNA-1:cds;Parent=Msa0051440-mRNA-1 |
| chr1_2 | CDS | 5538784 | 5538944 | 5538784 | ID=Msa0051440-mRNA-1:cds;Parent=Msa0051440-mRNA-1 |
| chr1_2 | CDS | 5539162 | 5539380 | 5539162 | ID=Msa0051440-mRNA-1:cds;Parent=Msa0051440-mRNA-1 |
| chr1_2 | three_prime_UTR | 5539381 | 5539565 | 5539381 | ID=Msa0051440-mRNA-1:three_prime_utr;Parent=Msa0051440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
