AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0052500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0052500 MtrunA17_Chr1g0152211 90.345 1015 19 4 1 936 11 1025 0.0 1582
Msa0052500 MtrunA17_Chr1g0206921 49.080 978 385 27 34 936 64 1003 0.0 700
Msa0052500 MtrunA17_Chr4g0037851 25.047 535 280 19 78 544 191 672 6.57e-19 92.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0052500 AT1G44910.1 52.563 995 362 20 2 934 12 958 0.0 832
Msa0052500 AT1G44910.2 52.147 955 351 18 2 894 12 922 0.0 788
Msa0052500 AT3G19670.3 38.988 1008 490 26 1 933 33 990 0.0 573
Msa0052500 AT3G19670.1 38.988 1008 490 26 1 933 33 990 0.0 573
Msa0052500 AT3G19670.2 38.988 1008 490 26 1 933 33 990 0.0 573
Msa0052500 AT3G19670.4 39.113 992 479 26 17 933 30 971 0.0 566
Msa0052500 AT3G19840.1 27.426 237 131 10 56 254 97 330 5.86e-11 67.0

Find 216 sgRNAs with CRISPR-Local

Find 937 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCATGGCTTGCCTGTTTC+TGG 0.038438 1_2:-6777596 Msa0052500:CDS
GATAATCAACGACCAGTTTC+TGG 0.168664 1_2:-6773811 Msa0052500:CDS
AGCAGAATATAGGAAATTTC+TGG 0.198110 1_2:-6769798 Msa0052500:CDS
ATGTACACGCCTGTGAATTT+AGG 0.202335 1_2:-6764428 Msa0052500:three_prime_UTR
GGCCTGTTTGTTTGAATATA+TGG 0.213492 1_2:+6777674 None:intergenic
AAATGCATTTAAAGCGCTTT+TGG 0.225366 1_2:-6772844 Msa0052500:CDS
AGAACTTCACCTGCATCTTT+TGG 0.233965 1_2:-6764492 Msa0052500:three_prime_UTR
CCATATACCTTGAGTTCTTC+TGG 0.251280 1_2:+6774096 None:intergenic
ACATCCTCAAATAAATCTTT+TGG 0.289484 1_2:+6767533 None:intergenic
GGGACCACGGGGACGGTTCC+AGG 0.299819 1_2:-6764611 Msa0052500:CDS
TTTGAGGCGGATGCTGGTAT+TGG 0.308848 1_2:+6777417 None:intergenic
TTTATCTAATCATTGCAAAA+AGG 0.318893 1_2:+6764514 None:intergenic
TTGAGGCGGATGCTGGTATT+GGG 0.320664 1_2:+6777418 None:intergenic
TTTCAGTTCACACCATCTTA+TGG 0.321948 1_2:-6777452 Msa0052500:intron
TTATCATCCATTCAGTATTT+GGG 0.338884 1_2:-6772505 Msa0052500:intron
TACCAAAGTTTCACCATCAT+TGG 0.343297 1_2:+6773005 None:intergenic
CGTTCAGTTGGCCCGTGAGC+AGG 0.344750 1_2:-6774004 Msa0052500:intron
CTCATTCCATCCAGTTCTCC+TGG 0.384057 1_2:+6764593 None:intergenic
TTCTGATTGGACGTGGGAAC+AGG 0.389042 1_2:-6772805 Msa0052500:intron
CTGTGAATGTTCATTCTGAT+TGG 0.390623 1_2:-6772818 Msa0052500:CDS
CCTTGCTGCGCATGAATGAC+TGG 0.390656 1_2:+6777881 None:intergenic
CAATGAAATTTGAAGATTTG+TGG 0.400009 1_2:+6764323 None:intergenic
ACAGCAGTTGCAGGAAGCTT+AGG 0.403204 1_2:-6773697 Msa0052500:CDS
TGAGGAGGTGCTCCAGAAAC+AGG 0.404094 1_2:+6777584 None:intergenic
GGGCTGATGCATCAACTGTT+TGG 0.410617 1_2:-6774312 Msa0052500:CDS
ATATAATGTTCTGGCAAATA+CGG 0.412466 1_2:-6764264 Msa0052500:three_prime_UTR
GATATAGGAACGAGTCCGTC+GGG 0.415488 1_2:-6767810 Msa0052500:intron
AGCTACTTGCAAAACAATAT+CGG 0.417106 1_2:-6766807 Msa0052500:CDS
GGGCTTGAAGCAAGACCATT+AGG 0.420839 1_2:+6773862 None:intergenic
TGCCATATATTCAAACAAAC+AGG 0.421533 1_2:-6777676 Msa0052500:CDS
ACCACTGATAATCCAGAAAC+TGG 0.425854 1_2:+6773799 None:intergenic
AGAGTACAAGGCAATCTAGT+TGG 0.428021 1_2:-6775118 Msa0052500:CDS
AATATTTGCATATAATGTTC+TGG 0.432563 1_2:-6764273 Msa0052500:three_prime_UTR
AAGAAGGCATCAGAGCAGTA+TGG 0.433242 1_2:-6764865 Msa0052500:CDS
GGAATGAGGAGCTTGAAGAT+GGG 0.437118 1_2:-6764578 Msa0052500:CDS
ACTTCCTTATATAGTTCAAT+TGG 0.438478 1_2:-6765568 Msa0052500:intron
AGCGACTACATCAGTATTTG+AGG 0.439124 1_2:-6766855 Msa0052500:CDS
ACTGCACCTACAGCAGTTGC+AGG 0.439764 1_2:-6773706 Msa0052500:CDS
TGGAGCACCTCTTCAAGATA+TGG 0.442331 1_2:-6773486 Msa0052500:CDS
AGGTTACTCAGCAATCAGTA+TGG 0.449369 1_2:-6774125 Msa0052500:CDS
AACCAATGATGGTGAAACTT+TGG 0.452007 1_2:-6773007 Msa0052500:CDS
TGGAATGAGGAGCTTGAAGA+TGG 0.452090 1_2:-6764579 Msa0052500:CDS
GATGCAACAGCTTGATATTG+AGG 0.452557 1_2:+6767575 None:intergenic
TCTTCTCCTCTCTATAACCA+TGG 0.455879 1_2:+6764919 None:intergenic
GCAGGAGGTGCATGCATTTG+AGG 0.456721 1_2:+6777401 None:intergenic
TACTCCAAAAGATTTATTTG+AGG 0.462163 1_2:-6767537 Msa0052500:CDS
GTCGGGATGCCTGCTATTCA+AGG 0.463184 1_2:-6777791 Msa0052500:CDS
CACGATTCTACTTCTGTCAA+TGG 0.463402 1_2:-6773506 Msa0052500:CDS
GAGCTTGAAGATGGGGAGCT+TGG 0.463687 1_2:-6764570 Msa0052500:CDS
ATGAAAAGTAGAAGGATTGT+TGG 0.464263 1_2:+6764449 None:intergenic
GACGACCAAGGTTGTCCGGC+AGG 0.464632 1_2:+6777383 None:intergenic
TCCAACACTTTGAGACCTAA+TGG 0.466267 1_2:-6773877 Msa0052500:CDS
CCCATGACTTCACAACAATT+CGG 0.467987 1_2:-6777845 Msa0052500:CDS
GAGTACAAGGCAATCTAGTT+GGG 0.468679 1_2:-6775117 Msa0052500:CDS
TGATTATCAGTGGCAACAAC+TGG 0.471567 1_2:+6773826 None:intergenic
AACGAGTCCGTCGGGGTGAA+AGG 0.472697 1_2:-6767802 Msa0052500:CDS
TGAGGACGACCAAGGTTGTC+CGG 0.473310 1_2:+6777379 None:intergenic
CTTTGAAAATCTTGAAAAGC+AGG 0.473646 1_2:-6767510 Msa0052500:intron
GGCACATAAAACTATTAGCC+AGG 0.474323 1_2:-6773983 Msa0052500:CDS
TTGTTTCTGACACCATTCCC+TGG 0.476710 1_2:+6773965 None:intergenic
GGGGACGGTTCCAGGAGAAC+TGG 0.476948 1_2:-6764603 Msa0052500:CDS
TTTGTGGCCTACATTACTCT+TGG 0.477285 1_2:+6764339 None:intergenic
ACAACTGGTGTAACAGAAGA+TGG 0.477825 1_2:+6773841 None:intergenic
AGCAGAGGAGGCAGCAGCAT+TGG 0.478603 1_2:+6773933 None:intergenic
CCGGCTGGAGTTCAATCATC+TGG 0.478668 1_2:-6777320 Msa0052500:CDS
GTTCACACCATCTTATGGTC+AGG 0.487720 1_2:-6777447 Msa0052500:CDS
CCATTCAGTATTTGGGTCAA+AGG 0.489226 1_2:-6772498 Msa0052500:intron
AATATCGGAGATCAATTTGA+AGG 0.489301 1_2:-6766792 Msa0052500:intron
GGAATACATTACATACTTGA+AGG 0.490150 1_2:-6765515 Msa0052500:CDS
CATAAAAGATATACTTAAGT+CGG 0.491240 1_2:-6766984 Msa0052500:CDS
GCAACAACTCTGCATCTGAT+TGG 0.493344 1_2:-6775342 Msa0052500:CDS
AAGCTTCCTGCAACTGCTGT+AGG 0.493376 1_2:+6773700 None:intergenic
CACCTCCTGCCGGACAACCT+TGG 0.495114 1_2:-6777388 Msa0052500:CDS
GCGTGTACATGAAAAGTAGA+AGG 0.495572 1_2:+6764441 None:intergenic
GTGGCGAGATTATTGCTTGA+AGG 0.495782 1_2:-6767708 Msa0052500:intron
CATCTTTGTGAATTCTTCGC+GGG 0.495972 1_2:+6772432 None:intergenic
TCACAACAATTCGGACATGC+AGG 0.496394 1_2:-6777836 Msa0052500:CDS
TGACCGGGCTGAATTTGTCT+TGG 0.497049 1_2:+6777728 None:intergenic
TCATCCTGTTTCATCATCAC+AGG 0.497226 1_2:-6777708 Msa0052500:CDS
ATAAAAGATATACTTAAGTC+GGG 0.500700 1_2:-6766983 Msa0052500:CDS
ATTAGAGAGAGCTAAGGAGA+AGG 0.502167 1_2:-6765909 Msa0052500:CDS
CCGTTCCTTCATCTAATGTC+GGG 0.507422 1_2:-6777808 Msa0052500:CDS
GCCGTTCCTTCATCTAATGT+CGG 0.508127 1_2:-6777809 Msa0052500:CDS
TTGGAGCTAGCTGCATTAGC+TGG 0.508131 1_2:+6773895 None:intergenic
AGAGAGAGCTAAGGAGAAGG+AGG 0.508555 1_2:-6765906 Msa0052500:CDS
TATTATTACTTCTTCAACAT+GGG 0.510330 1_2:-6765725 Msa0052500:CDS
AATTGCTGACCTTGAATAGC+AGG 0.511307 1_2:+6777782 None:intergenic
AGAGTTATTAGAGAGAGCTA+AGG 0.512572 1_2:-6765915 Msa0052500:CDS
CATGCATTTGAGGCGGATGC+TGG 0.512699 1_2:+6777411 None:intergenic
GGCGGAATTTAGCAGAATAT+AGG 0.514204 1_2:-6769808 Msa0052500:CDS
TTTGTTTGAATATATGGCAT+AGG 0.515540 1_2:+6777680 None:intergenic
AGTGCTTGGTTCGACTCCTA+TGG 0.517790 1_2:+6773744 None:intergenic
TCAGAGCAGTATGGAGGATG+TGG 0.518136 1_2:-6764856 Msa0052500:CDS
CTTTATACCAAGAGTAATGT+AGG 0.518872 1_2:-6764346 Msa0052500:three_prime_UTR
CAAATGCATGCACCTCCTGC+CGG 0.518916 1_2:-6777398 Msa0052500:CDS
CATGGTGGAACTTGAGAGAA+AGG 0.520392 1_2:-6772082 Msa0052500:intron
AAAGACACAAGAGGGACCAC+GGG 0.521871 1_2:-6764623 Msa0052500:CDS
TTACACAATCCTAAATTCAC+AGG 0.523335 1_2:+6764419 None:intergenic
CTAGAAGAACATATTGCTGA+TGG 0.524243 1_2:-6767752 Msa0052500:CDS
TGCTTGAAGTAACGACAGAA+TGG 0.525508 1_2:+6773767 None:intergenic
CTCACAGTTACAACAGTGCT+TGG 0.526579 1_2:+6773730 None:intergenic
ACATCTTTGTGAATTCTTCG+CGG 0.526596 1_2:+6772431 None:intergenic
GTAACGTCTGTACAGCCGGC+TGG 0.529488 1_2:-6777335 Msa0052500:CDS
CAAGAGCATACTGCTGGTGA+TGG 0.531052 1_2:-6775319 Msa0052500:CDS
TTTGGTATATGCAAATAAGC+TGG 0.531455 1_2:-6772989 Msa0052500:intron
AAGAGAGAAAACATCGAAGA+AGG 0.532161 1_2:-6764881 Msa0052500:CDS
ACCATTAGGTCTCAAAGTGT+TGG 0.536875 1_2:+6773876 None:intergenic
TTCTCAACAAATGCAACAGT+TGG 0.538488 1_2:-6777753 Msa0052500:CDS
CTGTTGAAAGAGTAAGAGAT+CGG 0.540036 1_2:-6772125 Msa0052500:CDS
AGATTTATTTGAAAGCTACA+TGG 0.541453 1_2:-6772100 Msa0052500:CDS
CGTACAGTGTATAGAGATTG+AGG 0.543077 1_2:+6777566 None:intergenic
TGATGATGAAACAGGATGAC+CGG 0.543456 1_2:+6777712 None:intergenic
AGCTGTAACGTCTGTACAGC+CGG 0.544674 1_2:-6777339 Msa0052500:CDS
AGAAGCTAGAGGCTGAAGAA+AGG 0.544989 1_2:-6772474 Msa0052500:CDS
ACGTAAGCGTGAAGAAGAAA+AGG 0.545043 1_2:-6765473 Msa0052500:intron
TGATATAGGAACGAGTCCGT+CGG 0.545937 1_2:-6767811 Msa0052500:intron
CAATATTCTCCAAAAGATGC+AGG 0.547173 1_2:+6764483 None:intergenic
ATACTGCTGGTGATGGGAGA+AGG 0.548219 1_2:-6775312 Msa0052500:intron
GCTGTTGCATCAAATACATC+CGG 0.551042 1_2:-6767563 Msa0052500:CDS
GAAGTGACCGCAAGAAGTCT+AGG 0.551692 1_2:-6764785 Msa0052500:CDS
GGAGTTGATGTCACCTCTTG+AGG 0.553125 1_2:-6775084 Msa0052500:intron
ATACCTTCCTAGACTTCTTG+CGG 0.553463 1_2:+6764778 None:intergenic
GAAAGAGTTCACTTCTTCAG+AGG 0.554876 1_2:-6774290 Msa0052500:CDS
TTCAACATGGGAGGAATGCA+AGG 0.556166 1_2:-6765713 Msa0052500:CDS
TCTAGAAAATCGCGAAGACA+TGG 0.556892 1_2:-6764807 Msa0052500:CDS
ATACCCTGTGATGATGAAAC+AGG 0.557450 1_2:+6777704 None:intergenic
CAGGAGAACTGGATGGAATG+AGG 0.557842 1_2:-6764592 Msa0052500:CDS
TCCGAATTGTTGTGAAGTCA+TGG 0.558122 1_2:+6777844 None:intergenic
GAGCTAGCTGCATTAGCTGG+TGG 0.559039 1_2:+6773898 None:intergenic
GCTTGAAGTAACGACAGAAT+GGG 0.559357 1_2:+6773768 None:intergenic
TAAAGTCATCAGCAAGGCGT+TGG 0.560032 1_2:+6765864 None:intergenic
CCAGTCATTCATGCGCAGCA+AGG 0.560968 1_2:-6777881 Msa0052500:CDS
AGTTGATGTTGCAGCAGAGG+AGG 0.561689 1_2:+6773921 None:intergenic
TCTCCTGAGTCAGACAATGA+AGG 0.561975 1_2:-6764654 Msa0052500:CDS
AAAAGACACAAGAGGGACCA+CGG 0.563924 1_2:-6764624 Msa0052500:CDS
TCAGAGGAGAAAACCAATGA+TGG 0.566057 1_2:-6773018 Msa0052500:CDS
TAAAACTATTAGCCAGGGAA+TGG 0.567415 1_2:-6773977 Msa0052500:CDS
CTACCTTCATTGTCTGACTC+AGG 0.567758 1_2:+6764651 None:intergenic
TATATTCTGCTAAATTCCGC+CGG 0.569486 1_2:+6769810 None:intergenic
AGCTAACATCATCCACAAGA+TGG 0.570809 1_2:-6772289 Msa0052500:CDS
GTCGTTACTTCAAGCACCAT+AGG 0.571185 1_2:-6773760 Msa0052500:CDS
TGTGAAGTCATGGGAACAAA+TGG 0.576862 1_2:+6777854 None:intergenic
CACATAAACAATCATATGCA+TGG 0.577352 1_2:-6777611 Msa0052500:CDS
CAGTCATTCATGCGCAGCAA+GGG 0.579509 1_2:-6777880 Msa0052500:CDS
TATTACTTCTTCAACATGGG+AGG 0.581858 1_2:-6765722 Msa0052500:CDS
AAAGAGTTCACTTCTTCAGA+GGG 0.582420 1_2:-6774289 Msa0052500:CDS
GGAAAAGGAAAATGCTGCTG+AGG 0.585150 1_2:-6769837 Msa0052500:CDS
ATGTACCTTCACAAAATCAC+AGG 0.586297 1_2:+6769772 None:intergenic
CCAGATGATTGAACTCCAGC+CGG 0.587420 1_2:+6777320 None:intergenic
TATAATGCCCTGAAAACACT+TGG 0.587574 1_2:-6772675 Msa0052500:CDS
CTGCAGGTATTATTACAACA+AGG 0.589073 1_2:-6774145 Msa0052500:intron
TGTTGAAAGAGTAAGAGATC+GGG 0.589167 1_2:-6772124 Msa0052500:CDS
GAATGAGGAGCTTGAAGATG+GGG 0.589298 1_2:-6764577 Msa0052500:CDS
ACATTAGTTTGTCCAACCAC+AGG 0.594069 1_2:+6773048 None:intergenic
GATTGGCAAGAGCATACTGC+TGG 0.595223 1_2:-6775325 Msa0052500:CDS
GACAATACCAGAAGAACTCA+AGG 0.597189 1_2:-6774103 Msa0052500:intron
ATGTTCATTCTGATTGGACG+TGG 0.597884 1_2:-6772812 Msa0052500:CDS
CACAAGAGGGACCACGGGGA+CGG 0.599081 1_2:-6764618 Msa0052500:CDS
AATACCTCCATATCTTGAAG+AGG 0.599572 1_2:+6773479 None:intergenic
AGATATACTTAAGTCGGGCA+AGG 0.600167 1_2:-6766978 Msa0052500:intron
AAAATGCTGCTGAGGAACAC+CGG 0.602673 1_2:-6769829 Msa0052500:CDS
CAACTGGTGTAACAGAAGAT+GGG 0.603013 1_2:+6773842 None:intergenic
GGCATCCCGACATTAGATGA+AGG 0.603036 1_2:+6777803 None:intergenic
TAACTTATTATATACACTCA+AGG 0.603685 1_2:-6765840 Msa0052500:intron
ATTACTACAACAAGAGTACA+AGG 0.603856 1_2:-6775130 Msa0052500:CDS
AAATACTGATGTAGTCGCTA+CGG 0.604006 1_2:+6766859 None:intergenic
CCCGACATTAGATGAAGGAA+CGG 0.604025 1_2:+6777808 None:intergenic
AACTAATGTGACTCCTTCAG+AGG 0.605322 1_2:-6773034 Msa0052500:CDS
TGGAGTTGATGTTGCAGCAG+AGG 0.607065 1_2:+6773918 None:intergenic
ACAGCTTGCTGTGCATGTTG+TGG 0.607782 1_2:+6777638 None:intergenic
AAAATTATACCTCCATCTTG+TGG 0.609019 1_2:+6772277 None:intergenic
ACGGTTCCAGGAGAACTGGA+TGG 0.609038 1_2:-6764599 Msa0052500:CDS
TGAGGCGGATGCTGGTATTG+GGG 0.609946 1_2:+6777419 None:intergenic
AACTGGTCGTTGATTATCAG+TGG 0.611617 1_2:+6773816 None:intergenic
ATATTATTACTTCTTCAACA+TGG 0.611639 1_2:-6765726 Msa0052500:CDS
TTTATTTGAAAGCTACATGG+TGG 0.617248 1_2:-6772097 Msa0052500:CDS
ACCAGTTTCTGGATTATCAG+TGG 0.617569 1_2:-6773800 Msa0052500:CDS
TGCATATGATTGTTTATGTG+AGG 0.618480 1_2:+6777614 None:intergenic
CACAACAATTCGGACATGCA+GGG 0.622894 1_2:-6777835 Msa0052500:CDS
AGATGCAGAGTTGTTGCTAG+TGG 0.623592 1_2:+6775348 None:intergenic
AAGAGCATACTGCTGGTGAT+GGG 0.629015 1_2:-6775318 Msa0052500:CDS
GACCAAGGTTGTCCGGCAGG+AGG 0.629097 1_2:+6777386 None:intergenic
CTGAGTCAGACAATGAAGGT+AGG 0.631523 1_2:-6764650 Msa0052500:CDS
GGCAATGCCTGACCATAAGA+TGG 0.632811 1_2:+6777440 None:intergenic
GGAGCTTGGCGATGATGCAG+AGG 0.632857 1_2:-6764556 Msa0052500:CDS
TTCTCCTGGAACCGTCCCCG+TGG 0.634316 1_2:+6764607 None:intergenic
GCTCCAAGACAAATTCAGCC+CGG 0.637474 1_2:-6777731 Msa0052500:CDS
AGAGGTGACATCAACTCCAA+AGG 0.638169 1_2:+6775089 None:intergenic
CATCCTGTTTCATCATCACA+GGG 0.640900 1_2:-6777707 Msa0052500:CDS
CAAGACATGACTGACAGCCA+TGG 0.642401 1_2:-6764936 Msa0052500:CDS
TAGGCATAAAAGACACAAGA+GGG 0.646717 1_2:-6764631 Msa0052500:CDS
TGACCGCAAGAAGTCTAGGA+AGG 0.647233 1_2:-6764781 Msa0052500:intron
GCAACTTGCGAAATGCATCA+CGG 0.647762 1_2:+6767774 None:intergenic
AAGGCATCAGAGCAGTATGG+AGG 0.652072 1_2:-6764862 Msa0052500:CDS
GCACATAAAACTATTAGCCA+GGG 0.652408 1_2:-6773982 Msa0052500:CDS
AGTTAGTAAAGTCATCAGCA+AGG 0.652933 1_2:+6765858 None:intergenic
GGAGGTGCATGCATTTGAGG+CGG 0.653398 1_2:+6777404 None:intergenic
TGACAGCCATGGTTATAGAG+AGG 0.655215 1_2:-6764925 Msa0052500:CDS
AGCACCTCTTCAAGATATGG+AGG 0.656627 1_2:-6773483 Msa0052500:intron
CCGAATTGTTGTGAAGTCAT+GGG 0.660354 1_2:+6777845 None:intergenic
GATGATGAAACAGGATGACC+GGG 0.660914 1_2:+6777713 None:intergenic
GTTACAGCTGCAGCACTCTG+AGG 0.670283 1_2:+6777353 None:intergenic
TAACATCATCCACAAGATGG+AGG 0.670995 1_2:-6772286 Msa0052500:intron
TGCAGCACTCTGAGGTACTG+AGG 0.673442 1_2:+6777361 None:intergenic
GAAGTCATGGGAACAAATGG+TGG 0.676169 1_2:+6777857 None:intergenic
GGGTCAAAGGAAGAAGCTAG+AGG 0.686231 1_2:-6772485 Msa0052500:CDS
TGAGGTACTGAGGACGACCA+AGG 0.686869 1_2:+6777371 None:intergenic
ATATAGGAACGAGTCCGTCG+GGG 0.690250 1_2:-6767809 Msa0052500:intron
GTAGGCATAAAAGACACAAG+AGG 0.702923 1_2:-6764632 Msa0052500:CDS
TGTTCATTCTGATTGGACGT+GGG 0.712631 1_2:-6772811 Msa0052500:CDS
TGTTGTGGAACAGATGTCAG+TGG 0.716753 1_2:+6777653 None:intergenic
AAGACACAAGAGGGACCACG+GGG 0.722637 1_2:-6764622 Msa0052500:CDS
ATGCTGCTGAGGAACACCGG+CGG 0.733976 1_2:-6769826 Msa0052500:CDS
ACAGTGTATAGAGATTGAGG+AGG 0.757065 1_2:+6777569 None:intergenic
TTCTTACTGCTAAAACACAG+TGG 0.768613 1_2:-6767727 Msa0052500:CDS
GCGAAAACAAGCTTTCAACG+AGG 0.790814 1_2:-6772649 Msa0052500:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG - chr1_2:6771512-6771531 Msa0052500:intron 0.0%
!! AATAATAATGTACATTATTT+AGG - chr1_2:6771393-6771412 Msa0052500:intron 10.0%
!! AAAATTTAATGTTATCATTA+TGG - chr1_2:6772965-6772984 Msa0052500:intron 10.0%
!! TATATTATATTAATTCAGAA+AGG + chr1_2:6773583-6773602 None:intergenic 10.0%
!! AGAAATAAACAATATTAAAT+AGG + chr1_2:6776113-6776132 None:intergenic 10.0%
!!! ATAATAAAATATATTTCTGT+AGG - chr1_2:6776358-6776377 Msa0052500:intron 10.0%
!!! ATTTTATAAATAATTTTTGC+AGG - chr1_2:6777020-6777039 Msa0052500:intron 10.0%
!! ATTTAAAAGTTATGAAAAGA+AGG + chr1_2:6764940-6764959 None:intergenic 15.0%
!!! ATTTACCCAATTTTTTTTAA+TGG - chr1_2:6767503-6767522 Msa0052500:intron 15.0%
!! AAATGCCATTAAAAAAAATT+GGG + chr1_2:6767511-6767530 None:intergenic 15.0%
!! AAAATGCCATTAAAAAAAAT+TGG + chr1_2:6767512-6767531 None:intergenic 15.0%
!! TTGATATAATAATCTTTCAT+GGG - chr1_2:6767720-6767739 Msa0052500:CDS 15.0%
!!! AATTGATTTAATTAATGACA+CGG + chr1_2:6767918-6767937 None:intergenic 15.0%
!!! ATATTAGTAAAATCTGTTTT+AGG - chr1_2:6768932-6768951 Msa0052500:intron 15.0%
!!! GAATCTTATTTTTATTTTGT+TGG - chr1_2:6770194-6770213 Msa0052500:intron 15.0%
!! AAAATACTTGAATATAATGA+AGG - chr1_2:6770281-6770300 Msa0052500:intron 15.0%
!! AAATACTTGAATATAATGAA+GGG - chr1_2:6770282-6770301 Msa0052500:intron 15.0%
!!! ATATAAAAAAAAGTGTTTCA+AGG - chr1_2:6770438-6770457 Msa0052500:intron 15.0%
!!! TATAAAAAAAAGTGTTTCAA+GGG - chr1_2:6770439-6770458 Msa0052500:intron 15.0%
!!! ATTTACTGCTTATTTTATTT+TGG + chr1_2:6771618-6771637 None:intergenic 15.0%
!! TTCAAAAATTGAAAGAATAA+TGG + chr1_2:6771737-6771756 None:intergenic 15.0%
!!! TATTATTTCCATTTCATTTT+AGG - chr1_2:6772428-6772447 Msa0052500:CDS 15.0%
!!! AATTTTTAAAAACATCAAGT+CGG + chr1_2:6772951-6772970 None:intergenic 15.0%
!!! AATGTTTTTTTTGTTTTTGT+TGG + chr1_2:6773270-6773289 None:intergenic 15.0%
!! ACAAAAACAAAAAAAACATT+TGG - chr1_2:6773270-6773289 Msa0052500:intron 15.0%
!! ATTATTATTATACTTCATCA+AGG + chr1_2:6773644-6773663 None:intergenic 15.0%
!!! ATAATATGAACTTTTATCAT+AGG - chr1_2:6773659-6773678 Msa0052500:CDS 15.0%
!!! TAAATTTTGCTTTTCATTTT+AGG - chr1_2:6773829-6773848 Msa0052500:CDS 15.0%
!!! AAATTTTGCTTTTCATTTTA+GGG - chr1_2:6773830-6773849 Msa0052500:CDS 15.0%
!! ATAAATTAAATGCAAATATG+TGG + chr1_2:6774873-6774892 None:intergenic 15.0%
!! GTGATATAATTAAGTTATAA+TGG - chr1_2:6775044-6775063 Msa0052500:intron 15.0%
!! AAAAATAAAGTTTATGTTTC+AGG + chr1_2:6775388-6775407 None:intergenic 15.0%
!! TATTATCTGAACTAAATAAA+TGG + chr1_2:6775561-6775580 None:intergenic 15.0%
!! TATTAGTTATAGTGTATAAT+TGG - chr1_2:6775860-6775879 Msa0052500:intron 15.0%
!!! CTGTTTAAATGTAAAAGTAT+GGG + chr1_2:6764844-6764863 None:intergenic 20.0%
!! ATGAATATATTCCAATAGAA+CGG - chr1_2:6764987-6765006 Msa0052500:CDS 20.0%
!! AATCACATTGAAATTTAAGT+AGG - chr1_2:6765103-6765122 Msa0052500:intron 20.0%
!! ATCACATTGAAATTTAAGTA+GGG - chr1_2:6765104-6765123 Msa0052500:intron 20.0%
!! TTGTCTAGTTAAAATTAAGT+AGG - chr1_2:6765134-6765153 Msa0052500:intron 20.0%
!! TGTCTAGTTAAAATTAAGTA+GGG - chr1_2:6765135-6765154 Msa0052500:intron 20.0%
!! AATGTCATGTTAAAAATTAG+AGG - chr1_2:6765166-6765185 Msa0052500:intron 20.0%
!! ATGTCATGTTAAAAATTAGA+GGG - chr1_2:6765167-6765186 Msa0052500:intron 20.0%
!! ATTACATAAGGAAATATCTA+GGG + chr1_2:6765241-6765260 None:intergenic 20.0%
!! TACTGAAATTGAGATTAAAA+AGG + chr1_2:6765363-6765382 None:intergenic 20.0%
!! TATATGTGATAATAATTGTG+AGG - chr1_2:6765384-6765403 Msa0052500:intron 20.0%
!!! TTTTTGTTCTGACAAATTTT+AGG - chr1_2:6766727-6766746 Msa0052500:intron 20.0%
!!! AAGGTATTTTTGTTTTTTCT+AGG + chr1_2:6766850-6766869 None:intergenic 20.0%
!! AAAAACAAAAATACCTTGTA+CGG - chr1_2:6766853-6766872 Msa0052500:CDS 20.0%
!! TATAAAATTACTAAAGGAAC+GGG + chr1_2:6767412-6767431 None:intergenic 20.0%
!! CTATAAAATTACTAAAGGAA+CGG + chr1_2:6767413-6767432 None:intergenic 20.0%
!!! GTTCCTTTAGTAATTTTATA+GGG - chr1_2:6767412-6767431 Msa0052500:intron 20.0%
!!! TGTATTATTCTTGTTAGTTT+TGG - chr1_2:6767621-6767640 Msa0052500:intron 20.0%
!! ATATCATTAATTAACTCTCT+AGG - chr1_2:6767656-6767675 Msa0052500:intron 20.0%
!! CATGAAAGATTATTATATCA+AGG + chr1_2:6767721-6767740 None:intergenic 20.0%
!! CTTGATATAATAATCTTTCA+TGG - chr1_2:6767719-6767738 Msa0052500:CDS 20.0%
!!! ATTGATTTAATTAATGACAC+GGG + chr1_2:6767917-6767936 None:intergenic 20.0%
!!! AACATAATTTTATACATGGA+TGG + chr1_2:6768467-6768486 None:intergenic 20.0%
!!! CTTTTATCATTTAGAGTTAT+TGG - chr1_2:6768661-6768680 Msa0052500:intron 20.0%
!!! ATTGTATCATTCTAAAAGTA+TGG - chr1_2:6768685-6768704 Msa0052500:intron 20.0%
!! TTCTTATTCATCAATTGAAT+TGG + chr1_2:6768773-6768792 None:intergenic 20.0%
!! TCATATTTGAATCGTAATTT+AGG - chr1_2:6769380-6769399 Msa0052500:intron 20.0%
!!! ATTACAAACATTCTTTTTTC+AGG - chr1_2:6769786-6769805 Msa0052500:CDS 20.0%
!! TAACATATTACTCAAGAAAA+AGG + chr1_2:6770143-6770162 None:intergenic 20.0%
!! TCTTACAATACTTATCAATT+TGG - chr1_2:6770167-6770186 Msa0052500:intron 20.0%
!! CTTACAATACTTATCAATTT+GGG - chr1_2:6770168-6770187 Msa0052500:intron 20.0%
!! TTACAATACTTATCAATTTG+GGG - chr1_2:6770169-6770188 Msa0052500:intron 20.0%
!!! TCTTATTTTTATTTTGTTGG+TGG - chr1_2:6770197-6770216 Msa0052500:intron 20.0%
!!! CTTATTTTTATTTTGTTGGT+GGG - chr1_2:6770198-6770217 Msa0052500:intron 20.0%
!!! TTATTTTTATTTTGTTGGTG+GGG - chr1_2:6770199-6770218 Msa0052500:intron 20.0%
!! CTTACAGCAAAAAAAAAAAA+TGG + chr1_2:6770398-6770417 None:intergenic 20.0%
!!! AGTTTTTGTTTTTCTATTGA+GGG - chr1_2:6770770-6770789 Msa0052500:intron 20.0%
!! AATATAGTATAGCTATATGT+AGG - chr1_2:6770845-6770864 Msa0052500:intron 20.0%
!! TATTTATAGTTAGTAAAGCT+GGG + chr1_2:6770955-6770974 None:intergenic 20.0%
!! ATATTTATAGTTAGTAAAGC+TGG + chr1_2:6770956-6770975 None:intergenic 20.0%
!! TGAAGACGTAATATAAATTA+GGG + chr1_2:6771080-6771099 None:intergenic 20.0%
!! TTGAAGACGTAATATAAATT+AGG + chr1_2:6771081-6771100 None:intergenic 20.0%
!! AAAATCTAACCTAAAAGTAA+AGG + chr1_2:6771128-6771147 None:intergenic 20.0%
!! AAATAAGCAGTAAATCATAA+TGG - chr1_2:6771623-6771642 Msa0052500:intron 20.0%
!!! TTCTTTCAATTTTTGAATGT+TGG - chr1_2:6771740-6771759 Msa0052500:intron 20.0%
!!! TCTTTCAATTTTTGAATGTT+GGG - chr1_2:6771741-6771760 Msa0052500:intron 20.0%
!!! ATTAGGTTTTAATCTAAACA+GGG + chr1_2:6772135-6772154 None:intergenic 20.0%
!!! TATTAGGTTTTAATCTAAAC+AGG + chr1_2:6772136-6772155 None:intergenic 20.0%
!! TGAGAAACTTGAATTAAAAT+CGG + chr1_2:6772170-6772189 None:intergenic 20.0%
!!! AAATAGCTAAATTTTGCAAT+TGG - chr1_2:6772198-6772217 Msa0052500:intron 20.0%
!!! TTTTTTTTTTCTTTCTGAAG+AGG - chr1_2:6772362-6772381 Msa0052500:intron 20.0%
!! GAAATGGAAATAATAAGAAA+AGG + chr1_2:6772423-6772442 None:intergenic 20.0%
!!! TTTTTTGTTTTTGTTGGATA+CGG + chr1_2:6773264-6773283 None:intergenic 20.0%
!! AAACAAAAAAAACATTTGGT+CGG - chr1_2:6773274-6773293 Msa0052500:intron 20.0%
!! CACTAAAAAATACATAAAGT+TGG + chr1_2:6773732-6773751 None:intergenic 20.0%
!!! CAACTTTATGTATTTTTTAG+TGG - chr1_2:6773730-6773749 Msa0052500:CDS 20.0%
!! AAAATATTCAAATCCAACAT+TGG - chr1_2:6774024-6774043 Msa0052500:intron 20.0%
!!! AAATTTGAGTTGAAAAACAT+CGG + chr1_2:6774250-6774269 None:intergenic 20.0%
!! AAACTCATTCACAATATTAA+GGG + chr1_2:6774649-6774668 None:intergenic 20.0%
!! TAACTTAATTATATCACTAG+AGG + chr1_2:6775041-6775060 None:intergenic 20.0%
!! CATAAAAGATATACTTAAGT+CGG - chr1_2:6775123-6775142 Msa0052500:CDS 20.0%
!! ATAAAAGATATACTTAAGTC+GGG - chr1_2:6775124-6775143 Msa0052500:CDS 20.0%
!! AATTTGAAGGTAATGAATTT+CGG - chr1_2:6775328-6775347 Msa0052500:CDS 20.0%
!!! TTTTCTTGACATTTATTAGA+AGG - chr1_2:6775459-6775478 Msa0052500:intron 20.0%
!! GTGCATTATTATAATTGTTA+AGG - chr1_2:6775610-6775629 Msa0052500:intron 20.0%
!!! TTGTTTATTTCTTTGCAAAA+TGG - chr1_2:6776121-6776140 Msa0052500:intron 20.0%
!!! CTTCAAATAAAAGCTTTAAA+AGG + chr1_2:6776174-6776193 None:intergenic 20.0%
!! TAACTTATTATATACACTCA+AGG - chr1_2:6776267-6776286 Msa0052500:intron 20.0%
!! ATATTATTACTTCTTCAACA+TGG - chr1_2:6776381-6776400 Msa0052500:intron 20.0%
!! TATTATTACTTCTTCAACAT+GGG - chr1_2:6776382-6776401 Msa0052500:intron 20.0%
!!! AATCAACAAATTTTAGATCA+TGG + chr1_2:6776502-6776521 None:intergenic 20.0%
!!! CTATAGTAAAGAAATTTTTG+AGG - chr1_2:6776571-6776590 Msa0052500:intron 20.0%
!!! GAAGTTTTACAATTTAGAAT+AGG - chr1_2:6777395-6777414 Msa0052500:CDS 20.0%
!! TTTATCTAATCATTGCAAAA+AGG + chr1_2:6777596-6777615 None:intergenic 20.0%
!! AATATTTGCATATAATGTTC+TGG - chr1_2:6777834-6777853 Msa0052500:CDS 20.0%
! TTTGTTTGAATATATGGCAT+AGG + chr1_2:6764430-6764449 None:intergenic 25.0%
! AGGAAAAACTTCAAAAAGTA+AGG + chr1_2:6764572-6764591 None:intergenic 25.0%
! ACTGAAAAATTGTAAAGGAT+GGG + chr1_2:6764642-6764661 None:intergenic 25.0%
! AACTGAAAAATTGTAAAGGA+TGG + chr1_2:6764643-6764662 None:intergenic 25.0%
! TGTGAACTGAAAAATTGTAA+AGG + chr1_2:6764647-6764666 None:intergenic 25.0%
! GCTGTTTAAATGTAAAAGTA+TGG + chr1_2:6764845-6764864 None:intergenic 25.0%
!!! AAGTAATGTGTTTTAAATGC+TGG - chr1_2:6764910-6764929 Msa0052500:CDS 25.0%
! TCACATTGAAATTTAAGTAG+GGG - chr1_2:6765105-6765124 Msa0052500:intron 25.0%
! GTCTAGTTAAAATTAAGTAG+GGG - chr1_2:6765136-6765155 Msa0052500:intron 25.0%
! TCTAGTTAAAATTAAGTAGG+GGG - chr1_2:6765137-6765156 Msa0052500:intron 25.0%
! TGTCATGTTAAAAATTAGAG+GGG - chr1_2:6765168-6765187 Msa0052500:intron 25.0%
! GATTACATAAGGAAATATCT+AGG + chr1_2:6765242-6765261 None:intergenic 25.0%
! ACTGAAATTGAGATTACATA+AGG + chr1_2:6765253-6765272 None:intergenic 25.0%
! TTTACCCAAAACTCAAAATA+GGG + chr1_2:6765489-6765508 None:intergenic 25.0%
!! TTTTACCCAAAACTCAAAAT+AGG + chr1_2:6765490-6765509 None:intergenic 25.0%
!!! GTTTCTGGCTTAAATAAAAA+TGG - chr1_2:6765906-6765925 Msa0052500:CDS 25.0%
!! TAGTTGTCACACATATATTT+TGG - chr1_2:6766359-6766378 Msa0052500:intron 25.0%
! AAAAACTCAATTCTCACATA+AGG + chr1_2:6766614-6766633 None:intergenic 25.0%
! AATAATTGAAAAACCGTACA+AGG + chr1_2:6766869-6766888 None:intergenic 25.0%
!!! TGTCATTTTTTATCATCTGT+TGG - chr1_2:6767075-6767094 Msa0052500:intron 25.0%
!!! ATTTTAACAACTGCTCTATA+TGG - chr1_2:6767257-6767276 Msa0052500:intron 25.0%
! TTTAACCTAAAATGTGAGAT+TGG - chr1_2:6767347-6767366 Msa0052500:intron 25.0%
!! CGTTCCTTTAGTAATTTTAT+AGG - chr1_2:6767411-6767430 Msa0052500:intron 25.0%
! TCACCCTATAAAATTACTAA+AGG + chr1_2:6767418-6767437 None:intergenic 25.0%
!! ATTTTATAGGGTGATCTAAT+TGG - chr1_2:6767424-6767443 Msa0052500:intron 25.0%
!! TTTTATAGGGTGATCTAATT+GGG - chr1_2:6767425-6767444 Msa0052500:intron 25.0%
! CAAAAAAGAAACTAATAGGT+GGG + chr1_2:6767535-6767554 None:intergenic 25.0%
! GAAGCAAAAAAGAAACTAAT+AGG + chr1_2:6767539-6767558 None:intergenic 25.0%
! TGTTTAAATATTTATGCACG+CGG - chr1_2:6767578-6767597 Msa0052500:CDS 25.0%
!!! ATCTTTTCTTTATTAGCTTG+CGG - chr1_2:6767685-6767704 Msa0052500:intron 25.0%
! ATATAATAATCTTTCATGGG+TGG - chr1_2:6767723-6767742 Msa0052500:CDS 25.0%
!! TGTAACTGTTTTCCATTATT+TGG - chr1_2:6768049-6768068 Msa0052500:intron 25.0%
! ACAAATAGGTAAGAAATTGT+CGG + chr1_2:6768075-6768094 None:intergenic 25.0%
!! TGAACGGAAATTTTACAAAT+AGG + chr1_2:6768089-6768108 None:intergenic 25.0%
!! AATTTTTGAATCAAGTGAGT+TGG + chr1_2:6768444-6768463 None:intergenic 25.0%
!! GCAGAACATAATTTTATACA+TGG + chr1_2:6768471-6768490 None:intergenic 25.0%
!! CTTGCTAATTTAAAATTTCC+CGG - chr1_2:6768554-6768573 Msa0052500:intron 25.0%
!! ATCAATTGAATTGGTTTCAA+AGG + chr1_2:6768764-6768783 None:intergenic 25.0%
! ATTGCAAAAGAGAACAATAA+TGG + chr1_2:6768838-6768857 None:intergenic 25.0%
! GAATAGAAAAGATTCTTGAT+TGG + chr1_2:6768905-6768924 None:intergenic 25.0%
! ATCTCCTCTATTAAAAAACT+TGG - chr1_2:6769165-6769184 Msa0052500:intron 25.0%
! CCTAAAAGAGTAAAATAAAG+CGG + chr1_2:6769236-6769255 None:intergenic 25.0%
!! ATTTGAAACACAACAATGAA+TGG + chr1_2:6769352-6769371 None:intergenic 25.0%
! AAAATGAAGGATATGATGTA+AGG + chr1_2:6769521-6769540 None:intergenic 25.0%
! ATATCAAAAGCCAGATAAAA+CGG + chr1_2:6769572-6769591 None:intergenic 25.0%
! TTTATCATCCATTCAGTATT+TGG - chr1_2:6769601-6769620 Msa0052500:intron 25.0%
! TTATCATCCATTCAGTATTT+GGG - chr1_2:6769602-6769621 Msa0052500:intron 25.0%
! AGTAAATGCACAAATTTATG+TGG + chr1_2:6769724-6769743 None:intergenic 25.0%
! AGATTTATTTGAAAGCTACA+TGG - chr1_2:6770007-6770026 Msa0052500:intron 25.0%
! ATATCATTTAGGTCTATTGT+TGG - chr1_2:6770096-6770115 Msa0052500:intron 25.0%
! TTACTCAAGAAAAAGGTTTA+TGG + chr1_2:6770136-6770155 None:intergenic 25.0%
!!! TATTTTTATTTTGTTGGTGG+GGG - chr1_2:6770200-6770219 Msa0052500:intron 25.0%
!! TCATTGTAGCATTTACATTT+TGG - chr1_2:6770253-6770272 Msa0052500:intron 25.0%
! GTTCACATATTTATCAATGA+AGG - chr1_2:6770482-6770501 Msa0052500:intron 25.0%
! ACATATTTATCAATGAAGGA+AGG - chr1_2:6770486-6770505 Msa0052500:intron 25.0%
! CATATTTATCAATGAAGGAA+GGG - chr1_2:6770487-6770506 Msa0052500:intron 25.0%
! GAAAATAGAAATCAAATGGA+AGG + chr1_2:6770515-6770534 None:intergenic 25.0%
! CTTGGAAAATAGAAATCAAA+TGG + chr1_2:6770519-6770538 None:intergenic 25.0%
! AATGATCCACAACAAAATTA+TGG + chr1_2:6770736-6770755 None:intergenic 25.0%
! CTCAATAGAAAAACAAAAAC+TGG + chr1_2:6770771-6770790 None:intergenic 25.0%
!!! CAGTTTTTGTTTTTCTATTG+AGG - chr1_2:6770769-6770788 Msa0052500:intron 25.0%
!! ATTAACGGGTATTCAAATTT+CGG - chr1_2:6770802-6770821 Msa0052500:intron 25.0%
! TAACTTTGTAACTAACTTAG+TGG + chr1_2:6770924-6770943 None:intergenic 25.0%
!! TGGTTCTGTTATTACATAAA+TGG + chr1_2:6771009-6771028 None:intergenic 25.0%
!!! ATTAGTGAACCTTTACTTTT+AGG - chr1_2:6771116-6771135 Msa0052500:intron 25.0%
!!! ACTTTTAGGTTAGATTTTAG+TGG - chr1_2:6771130-6771149 Msa0052500:intron 25.0%
!!! CTTTTAGGTTAGATTTTAGT+GGG - chr1_2:6771131-6771150 Msa0052500:intron 25.0%
! TTTGATGAAATGTACCTATA+TGG + chr1_2:6771192-6771211 None:intergenic 25.0%
!!! TGGATTTTGGTTTACATTTA+TGG + chr1_2:6771586-6771605 None:intergenic 25.0%
!! CAAAAACCAGTAAATAGTTT+TGG + chr1_2:6771895-6771914 None:intergenic 25.0%
!!! AAACTATTTACTGGTTTTTG+TGG - chr1_2:6771895-6771914 Msa0052500:intron 25.0%
!!! AGCTAGTTAGTTTTTAATTC+TGG - chr1_2:6771961-6771980 Msa0052500:intron 25.0%
!!! GCTAGTTAGTTTTTAATTCT+GGG - chr1_2:6771962-6771981 Msa0052500:intron 25.0%
! TAAAACCTAATAATGAGCAT+TGG - chr1_2:6772144-6772163 Msa0052500:CDS 25.0%
! ACAAAGGATAATAGTAAGAA+TGG + chr1_2:6772240-6772259 None:intergenic 25.0%
! TTATCCTTTGTGTAAACTTT+AGG - chr1_2:6772249-6772268 Msa0052500:intron 25.0%
!! TTTTCCTAAAGTTTACACAA+AGG + chr1_2:6772256-6772275 None:intergenic 25.0%
!! TTTGTGTAAACTTTAGGAAA+AGG - chr1_2:6772255-6772274 Msa0052500:intron 25.0%
! ACTATTCACCTAAAATGAAA+TGG + chr1_2:6772439-6772458 None:intergenic 25.0%
! ACTAAAAGAACTTATTTACC+TGG + chr1_2:6772542-6772561 None:intergenic 25.0%
! AAAATGAACATGAGAAATAG+TGG - chr1_2:6772611-6772630 Msa0052500:intron 25.0%
!!! TCAGTCACTTTTTAAATTTC+TGG + chr1_2:6772710-6772729 None:intergenic 25.0%
!!! CCACTTTTAATTAATGTTTC+TGG + chr1_2:6772794-6772813 None:intergenic 25.0%
! CCAGAAACATTAATTAAAAG+TGG - chr1_2:6772791-6772810 Msa0052500:intron 25.0%
!! TTTTTGCATATTTGTGATAG+TGG + chr1_2:6773033-6773052 None:intergenic 25.0%
!!! TTCTTCTTTTTTTCTGTGAT+TGG + chr1_2:6773338-6773357 None:intergenic 25.0%
!! TTTTCCAATAACAAACAACT+CGG + chr1_2:6774008-6774027 None:intergenic 25.0%
!! AACTTACAAGTCAATTTTGT+GGG - chr1_2:6774089-6774108 Msa0052500:intron 25.0%
!! TGCTTGTGTATTCATTTTAA+TGG - chr1_2:6774270-6774289 Msa0052500:intron 25.0%
!!! GCTTGTGTATTCATTTTAAT+GGG - chr1_2:6774271-6774290 Msa0052500:intron 25.0%
!!! CATTTTAATGGGTATGATAT+AGG - chr1_2:6774282-6774301 Msa0052500:intron 25.0%
!! TTTTATGCTCTCTATTTTGT+AGG - chr1_2:6774498-6774517 Msa0052500:intron 25.0%
! TACTCCAAAAGATTTATTTG+AGG - chr1_2:6774570-6774589 Msa0052500:intron 25.0%
!! ACATCCTCAAATAAATCTTT+TGG + chr1_2:6774577-6774596 None:intergenic 25.0%
! CAAACTCATTCACAATATTA+AGG + chr1_2:6774650-6774669 None:intergenic 25.0%
! ATCATGATTCAGAAGAAAAT+AGG + chr1_2:6774815-6774834 None:intergenic 25.0%
!! TTAAGGCATATTTTACATGA+TGG - chr1_2:6775627-6775646 Msa0052500:intron 25.0%
! ATATGTGTGAAATGAACAAA+AGG + chr1_2:6775757-6775776 None:intergenic 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG - chr1_2:6775912-6775931 Msa0052500:intron 25.0%
!! GGACAATATTTTATTGCAAA+TGG - chr1_2:6775933-6775952 Msa0052500:intron 25.0%
!! GATTCATATTTCACAGTTTT+TGG - chr1_2:6776314-6776333 Msa0052500:intron 25.0%
! ACTTCCTTATATAGTTCAAT+TGG - chr1_2:6776539-6776558 Msa0052500:intron 25.0%
! ATCTCCAATTGAACTATATA+AGG + chr1_2:6776546-6776565 None:intergenic 25.0%
! TTGATATTATGTTTCCTTTC+AGG - chr1_2:6776818-6776837 Msa0052500:intron 25.0%
! TAATCATTGCAAAAAGGTTA+GGG + chr1_2:6777590-6777609 None:intergenic 25.0%
! CAATGAAATTTGAAGATTTG+TGG + chr1_2:6777787-6777806 None:intergenic 25.0%
! ATATAATGTTCTGGCAAATA+CGG - chr1_2:6777843-6777862 Msa0052500:CDS 25.0%
!!! TTTTAGTTCTTTCAGTCAAA+TGG + chr1_2:6777886-6777905 None:intergenic 25.0%
TGCCATATATTCAAACAAAC+AGG - chr1_2:6764431-6764450 Msa0052500:three_prime_UTR 30.0%
TGCATATGATTGTTTATGTG+AGG + chr1_2:6764496-6764515 None:intergenic 30.0%
CACATAAACAATCATATGCA+TGG - chr1_2:6764496-6764515 Msa0052500:three_prime_UTR 30.0%
ACAAACTAGTAATCTACAAC+GGG + chr1_2:6764595-6764614 None:intergenic 30.0%
GACAAACTAGTAATCTACAA+CGG + chr1_2:6764596-6764615 None:intergenic 30.0%
!! AATTGTAAAGGATGGGTTAA+AGG + chr1_2:6764635-6764654 None:intergenic 30.0%
! AATGCTACTTGATTTGATCA+TGG - chr1_2:6764963-6764982 Msa0052500:CDS 30.0%
CTAGTTAAAATTAAGTAGGG+GGG - chr1_2:6765138-6765157 Msa0052500:intron 30.0%
TAGTTAAAATTAAGTAGGGG+GGG - chr1_2:6765139-6765158 Msa0052500:intron 30.0%
GTCATGTTAAAAATTAGAGG+GGG - chr1_2:6765169-6765188 Msa0052500:intron 30.0%
!! TGACATTTTAACAAACCTCA+AGG - chr1_2:6765198-6765217 Msa0052500:intron 30.0%
!! GACATTTTAACAAACCTCAA+GGG - chr1_2:6765199-6765218 Msa0052500:intron 30.0%
AGAAAGAAACTAGAACGTAA+AGG - chr1_2:6765416-6765435 Msa0052500:intron 30.0%
!! ACTCAAAATAGGGCTATTTT+GGG + chr1_2:6765479-6765498 None:intergenic 30.0%
! AACTCAAAATAGGGCTATTT+TGG + chr1_2:6765480-6765499 None:intergenic 30.0%
!!! AATAGCCCTATTTTGAGTTT+TGG - chr1_2:6765481-6765500 Msa0052500:CDS 30.0%
!!! ATAGCCCTATTTTGAGTTTT+GGG - chr1_2:6765482-6765501 Msa0052500:CDS 30.0%
ATGAATCATTACGAGTCAAT+AGG - chr1_2:6765588-6765607 Msa0052500:intron 30.0%
TGAATCATTACGAGTCAATA+GGG - chr1_2:6765589-6765608 Msa0052500:intron 30.0%
TGAGCAGATAGGAAAAATTA+GGG - chr1_2:6765830-6765849 Msa0052500:intron 30.0%
GACAATGAAGTTAGATTATC+AGG - chr1_2:6766125-6766144 Msa0052500:intron 30.0%
ATAATAATCATCCACGAGTT+GGG + chr1_2:6766196-6766215 None:intergenic 30.0%
TATAATAATCATCCACGAGT+TGG + chr1_2:6766197-6766216 None:intergenic 30.0%
! ATTGCTTGTATACTAGTTTC+TGG + chr1_2:6766250-6766269 None:intergenic 30.0%
AAGCTCTTAGTATCAATTAG+AGG - chr1_2:6766276-6766295 Msa0052500:intron 30.0%
!!! TCAATTATTTGTTTTGCCCA+AGG - chr1_2:6766317-6766336 Msa0052500:intron 30.0%
!!! CAATTATTTGTTTTGCCCAA+GGG - chr1_2:6766318-6766337 Msa0052500:intron 30.0%
!!! AATTATTTGTTTTGCCCAAG+GGG - chr1_2:6766319-6766338 Msa0052500:intron 30.0%
GAATGTGACTGTAAAAGAAT+TGG - chr1_2:6766384-6766403 Msa0052500:intron 30.0%
!! AATTGGTGACTTTGTTGTTA+AGG - chr1_2:6766401-6766420 Msa0052500:intron 30.0%
GTAGCTAATTGAATCTCAAT+AGG - chr1_2:6766456-6766475 Msa0052500:intron 30.0%
! TGAAAAAAGTTTCTGAAGAG+TGG + chr1_2:6766589-6766608 None:intergenic 30.0%
!!! ACTCTTCAGAAACTTTTTTC+AGG - chr1_2:6766588-6766607 Msa0052500:intron 30.0%
! ATTACTACAACAAGAGTACA+AGG - chr1_2:6766977-6766996 Msa0052500:intron 30.0%
CATAAACCTTTCATGATCAT+TGG + chr1_2:6767171-6767190 None:intergenic 30.0%
CAATGATCATGAAAGGTTTA+TGG - chr1_2:6767169-6767188 Msa0052500:intron 30.0%
GTTAAAATTTCTCCTGACTT+GGG + chr1_2:6767245-6767264 None:intergenic 30.0%
TGTTAAAATTTCTCCTGACT+TGG + chr1_2:6767246-6767265 None:intergenic 30.0%
GCAAAAAAGAAACTAATAGG+TGG + chr1_2:6767536-6767555 None:intergenic 30.0%
TAAACACTGCATTCATAAGA+GGG + chr1_2:6767564-6767583 None:intergenic 30.0%
TTAAACACTGCATTCATAAG+AGG + chr1_2:6767565-6767584 None:intergenic 30.0%
TTTAATTAATGACACGGGAA+GGG + chr1_2:6767912-6767931 None:intergenic 30.0%
ATTTAATTAATGACACGGGA+AGG + chr1_2:6767913-6767932 None:intergenic 30.0%
TTGTAAAATTTCCGTTCAGT+TGG - chr1_2:6768091-6768110 Msa0052500:intron 30.0%
CTTCATTTCTCTCTTATATC+TGG - chr1_2:6768512-6768531 Msa0052500:intron 30.0%
! TTCTAAAAGTATGGCCTATT+TGG - chr1_2:6768694-6768713 Msa0052500:intron 30.0%
! ATTGTTCTCTTTTGCAATCT+TGG - chr1_2:6768840-6768859 Msa0052500:intron 30.0%
CTTGATTGGACAAGATATAA+AGG + chr1_2:6768891-6768910 None:intergenic 30.0%
TTTGGTATATGCAAATAAGC+TGG - chr1_2:6769118-6769137 Msa0052500:intron 30.0%
GGTAAGTATTCTTTATGTCA+TGG - chr1_2:6769139-6769158 Msa0052500:intron 30.0%
!!! CCTACCAAGTTTTTTAATAG+AGG + chr1_2:6769172-6769191 None:intergenic 30.0%
CCTCTATTAAAAAACTTGGT+AGG - chr1_2:6769169-6769188 Msa0052500:intron 30.0%
TAAAGCGGTAATAAAGATGA+AGG + chr1_2:6769221-6769240 None:intergenic 30.0%
!!! CCGCTTTATTTTACTCTTTT+AGG - chr1_2:6769233-6769252 Msa0052500:intron 30.0%
!! AAATGCATTTAAAGCGCTTT+TGG - chr1_2:6769263-6769282 Msa0052500:intron 30.0%
ACAATGAATGGAAAAACTGA+AGG + chr1_2:6769340-6769359 None:intergenic 30.0%
GTTCACTTTATGCAAAATGA+AGG + chr1_2:6769534-6769553 None:intergenic 30.0%
TTGTAATGAGTAACTAGTGA+AGG + chr1_2:6769773-6769792 None:intergenic 30.0%
AAAATTATACCTCCATCTTG+TGG + chr1_2:6769833-6769852 None:intergenic 30.0%
!! TGTGTTTTCTTGTTTGTGTT+AGG - chr1_2:6769870-6769889 Msa0052500:intron 30.0%
TTTATTTGAAAGCTACATGG+TGG - chr1_2:6770010-6770029 Msa0052500:intron 30.0%
TACTTGAATATAATGAAGGG+AGG - chr1_2:6770285-6770304 Msa0052500:intron 30.0%
TAGTCAAGCTAAATACTGTT+TGG + chr1_2:6770360-6770379 None:intergenic 30.0%
CTGTAAGTAAATGTGTTTCA+AGG - chr1_2:6770411-6770430 Msa0052500:intron 30.0%
! TTTTCTATTGAGGGTCAAAT+AGG - chr1_2:6770779-6770798 Msa0052500:intron 30.0%
TGAGCTTATTCTGAATAAAC+TGG + chr1_2:6771029-6771048 None:intergenic 30.0%
AAAGGTTCACTAATAGACTT+CGG + chr1_2:6771110-6771129 None:intergenic 30.0%
!! TAGATTTTAGTGGGTATAGA+TGG - chr1_2:6771140-6771159 Msa0052500:intron 30.0%
! GAATATTAGCTATTTCAGTG+TGG - chr1_2:6771166-6771185 Msa0052500:intron 30.0%
TTTCATCAAATGTTGATACG+AGG - chr1_2:6771202-6771221 Msa0052500:intron 30.0%
GAATTATAATCTCCATCCAT+GGG + chr1_2:6771238-6771257 None:intergenic 30.0%
AGAATTATAATCTCCATCCA+TGG + chr1_2:6771239-6771258 None:intergenic 30.0%
TTATAATTCTCAGCTAGCAA+TGG - chr1_2:6771249-6771268 Msa0052500:intron 30.0%
TATAATTCTCAGCTAGCAAT+GGG - chr1_2:6771250-6771269 Msa0052500:intron 30.0%
TTAGGCTAAAATTCATGTCT+AGG - chr1_2:6771411-6771430 Msa0052500:intron 30.0%
TATATATATGGCCCAATCAT+AGG - chr1_2:6771560-6771579 Msa0052500:intron 30.0%
TACATTTATGGCCTATGATT+GGG + chr1_2:6771574-6771593 None:intergenic 30.0%
TTACATTTATGGCCTATGAT+TGG + chr1_2:6771575-6771594 None:intergenic 30.0%
TAAACCAAAATCCAAGTTCA+TGG - chr1_2:6771592-6771611 Msa0052500:intron 30.0%
!!! TTTTATTTTGGCCATGAACT+TGG + chr1_2:6771606-6771625 None:intergenic 30.0%
CAGTAAATCATAATGGCAAA+AGG - chr1_2:6771630-6771649 Msa0052500:intron 30.0%
CAAATGCATAAATTGAATGG+GGG + chr1_2:6771810-6771829 None:intergenic 30.0%
CCAAATGCATAAATTGAATG+GGG + chr1_2:6771811-6771830 None:intergenic 30.0%
CCCAAATGCATAAATTGAAT+GGG + chr1_2:6771812-6771831 None:intergenic 30.0%
CCCATTCAATTTATGCATTT+GGG - chr1_2:6771809-6771828 Msa0052500:intron 30.0%
ACCCAAATGCATAAATTGAA+TGG + chr1_2:6771813-6771832 None:intergenic 30.0%
TTCAATTTATGCATTTGGGT+CGG - chr1_2:6771813-6771832 Msa0052500:intron 30.0%
TACTGTCCAAAACTATTTAC+TGG - chr1_2:6771886-6771905 Msa0052500:intron 30.0%
!!! TATTTACTGGTTTTTGTGGA+CGG - chr1_2:6771899-6771918 Msa0052500:intron 30.0%
AGCAGAATATAGGAAATTTC+TGG - chr1_2:6772309-6772328 Msa0052500:intron 30.0%
!! CATTTTAGGTGAATAGTCAT+TGG - chr1_2:6772442-6772461 Msa0052500:CDS 30.0%
! TGTTCCAGTGTTATTAATAG+CGG - chr1_2:6772562-6772581 Msa0052500:intron 30.0%
AATAAAGCATGATGCATTGT+TGG - chr1_2:6772762-6772781 Msa0052500:intron 30.0%
AGTGGTTATTGCTTACATAT+TGG + chr1_2:6773015-6773034 None:intergenic 30.0%
ATTAGAGAATCAGTAGAGAA+AGG - chr1_2:6773369-6773388 Msa0052500:intron 30.0%
GAAATTAGAACCAAGAAGAA+GGG + chr1_2:6773458-6773477 None:intergenic 30.0%
TGAAATTAGAACCAAGAAGA+AGG + chr1_2:6773459-6773478 None:intergenic 30.0%
!! TCTTCTTGGTTCTAATTTCA+TGG - chr1_2:6773459-6773478 Msa0052500:intron 30.0%
ATTATACTTCATCAAGGACA+AGG + chr1_2:6773638-6773657 None:intergenic 30.0%
!! AATACCGAGTTGTTTGTTAT+TGG - chr1_2:6774001-6774020 Msa0052500:intron 30.0%
! GCCTATTTAGAGCTTATAAA+AGG - chr1_2:6774058-6774077 Msa0052500:intron 30.0%
!!! GCCTTTTATAAGCTCTAAAT+AGG + chr1_2:6774062-6774081 None:intergenic 30.0%
! CAACTTACAAGTCAATTTTG+TGG - chr1_2:6774088-6774107 Msa0052500:intron 30.0%
TTCACCTAAAACTCAATATG+AGG - chr1_2:6774118-6774137 Msa0052500:CDS 30.0%
TCACCTAAAACTCAATATGA+GGG - chr1_2:6774119-6774138 Msa0052500:CDS 30.0%
! CTATGTACTGATACTAACTT+TGG - chr1_2:6774144-6774163 Msa0052500:intron 30.0%
AAGGTAGTAAGAGATTTAGT+TGG - chr1_2:6774418-6774437 Msa0052500:intron 30.0%
!!! TAAATCTTTTGGAGTAGAAC+CGG + chr1_2:6774566-6774585 None:intergenic 30.0%
! CTTTGAAAATCTTGAAAAGC+AGG - chr1_2:6774597-6774616 Msa0052500:intron 30.0%
TTTATCACTGTTAGTTGACT+TGG - chr1_2:6774888-6774907 Msa0052500:intron 30.0%
TGAATATTTCTTGTGTGATC+TGG - chr1_2:6774975-6774994 Msa0052500:intron 30.0%
TAAGCTACAGATAAAACACA+AGG + chr1_2:6775174-6775193 None:intergenic 30.0%
AGCTACTTGCAAAACAATAT+CGG - chr1_2:6775300-6775319 Msa0052500:intron 30.0%
AATATCGGAGATCAATTTGA+AGG - chr1_2:6775315-6775334 Msa0052500:CDS 30.0%
!!! GTCCATTTCAATTCCTTTTT+TGG - chr1_2:6775360-6775379 Msa0052500:CDS 30.0%
AGCCAAAAAAGGAATTGAAA+TGG + chr1_2:6775365-6775384 None:intergenic 30.0%
GAAATTGATATTGAGCTCTT+CGG + chr1_2:6775432-6775451 None:intergenic 30.0%
ATTCTTCTCTTCTTCTTTCT+TGG + chr1_2:6775588-6775607 None:intergenic 30.0%
ACAAAAGGCTCACATATTAT+GGG + chr1_2:6775742-6775761 None:intergenic 30.0%
AACAAAAGGCTCACATATTA+TGG + chr1_2:6775743-6775762 None:intergenic 30.0%
TCCTTGTCAAGTGTTAAATT+GGG - chr1_2:6775823-6775842 Msa0052500:intron 30.0%
! GTGAAATGAGTCAGTTATTT+TGG - chr1_2:6775911-6775930 Msa0052500:intron 30.0%
TTTGTCTCCTTATAATGTCA+TGG - chr1_2:6776012-6776031 Msa0052500:intron 30.0%
AGTCAATCCATGACATTATA+AGG + chr1_2:6776022-6776041 None:intergenic 30.0%
! ATGGATTGACTTCAAAAACA+TGG - chr1_2:6776031-6776050 Msa0052500:intron 30.0%
ACAATATTAAATAGGCCAAC+TGG + chr1_2:6776105-6776124 None:intergenic 30.0%
GTGAAATATGAATCAGATCA+TGG + chr1_2:6776308-6776327 None:intergenic 30.0%
!!! TTTCACAGTTTTTGGCTAAA+TGG - chr1_2:6776322-6776341 Msa0052500:intron 30.0%
GGAATACATTACATACTTGA+AGG - chr1_2:6776592-6776611 Msa0052500:intron 30.0%
!! ACTTTGTTTGTTTCACCTTT+TGG - chr1_2:6776662-6776681 Msa0052500:intron 30.0%
!!! AGTTTTATTGCCAATTGCAA+TGG - chr1_2:6776723-6776742 Msa0052500:intron 30.0%
TTTCACTAATCCATTGCAAT+TGG + chr1_2:6776736-6776755 None:intergenic 30.0%
!! ATTGCAATGGATTAGTGAAA+TGG - chr1_2:6776736-6776755 Msa0052500:intron 30.0%
TATTCCAAAACAAACTCAGT+GGG - chr1_2:6776863-6776882 Msa0052500:intron 30.0%
! ATAATTTTTGCAGGCCAAAA+AGG - chr1_2:6777029-6777048 Msa0052500:intron 30.0%
! TTCTCTTTCTTTCTCCTTTT+TGG + chr1_2:6777046-6777065 None:intergenic 30.0%
GAAAGAAAAACGTAAAGAGA+AGG - chr1_2:6777068-6777087 Msa0052500:intron 30.0%
AGAGGAGAAGAAAAAAGAAA+AGG - chr1_2:6777200-6777219 Msa0052500:intron 30.0%
CTAATCATTGCAAAAAGGTT+AGG + chr1_2:6777591-6777610 None:intergenic 30.0%
ATGAAAAGTAGAAGGATTGT+TGG + chr1_2:6777661-6777680 None:intergenic 30.0%
TTACACAATCCTAAATTCAC+AGG + chr1_2:6777691-6777710 None:intergenic 30.0%
CTTTATACCAAGAGTAATGT+AGG - chr1_2:6777761-6777780 Msa0052500:CDS 30.0%
TTCTCAACAAATGCAACAGT+TGG - chr1_2:6764354-6764373 Msa0052500:three_prime_UTR 35.0%
GGCCTGTTTGTTTGAATATA+TGG + chr1_2:6764436-6764455 None:intergenic 35.0%
CTCAATCTCTATACACTGTA+CGG - chr1_2:6764542-6764561 Msa0052500:exon 35.0%
TCAATCTCTATACACTGTAC+GGG - chr1_2:6764543-6764562 Msa0052500:exon 35.0%
TTTCAGTTCACACCATCTTA+TGG - chr1_2:6764655-6764674 Msa0052500:CDS 35.0%
GTGATTCAGATTTGGAAGAA+AGG - chr1_2:6765018-6765037 Msa0052500:CDS 35.0%
CATTGAAATTTAAGTAGGGG+AGG - chr1_2:6765108-6765127 Msa0052500:intron 35.0%
AGTTAAAATTAAGTAGGGGG+GGG - chr1_2:6765140-6765159 Msa0052500:intron 35.0%
!! ATTTTAACAAACCTCAAGGG+AGG - chr1_2:6765202-6765221 Msa0052500:intron 35.0%
ACTGCACTAACTAAAACTTG+AGG - chr1_2:6765543-6765562 Msa0052500:CDS 35.0%
CTGCACTAACTAAAACTTGA+GGG - chr1_2:6765544-6765563 Msa0052500:CDS 35.0%
ACTAACTAAAACTTGAGGGA+GGG - chr1_2:6765548-6765567 Msa0052500:CDS 35.0%
!!! AGGAGTTTTGAATGTGAGAT+CGG - chr1_2:6765615-6765634 Msa0052500:intron 35.0%
TTGAAGGAAAAGGGATAGAT+TGG - chr1_2:6765645-6765664 Msa0052500:intron 35.0%
! ATAGATTGGTTAGGCATGTT+TGG - chr1_2:6765659-6765678 Msa0052500:intron 35.0%
! TAGATTGGTTAGGCATGTTT+GGG - chr1_2:6765660-6765679 Msa0052500:intron 35.0%
GTGAGCAGATAGGAAAAATT+AGG - chr1_2:6765829-6765848 Msa0052500:intron 35.0%
GGAAAAATTAGGGTTCACTT+AGG - chr1_2:6765840-6765859 Msa0052500:intron 35.0%
CATGAAAAATCGCAAGAACA+TGG + chr1_2:6765935-6765954 None:intergenic 35.0%
! CATGTTCTTGCGATTTTTCA+TGG - chr1_2:6765933-6765952 Msa0052500:intron 35.0%
ATCGCATCTAAGTAGGATAA+TGG + chr1_2:6765967-6765986 None:intergenic 35.0%
! AGAATTGATTCAACACAGAG+AGG - chr1_2:6766103-6766122 Msa0052500:intron 35.0%
ACTAAGGAAACTCGATATAC+TGG + chr1_2:6766220-6766239 None:intergenic 35.0%
GATTCAATTAGCTACTCTTG+TGG + chr1_2:6766451-6766470 None:intergenic 35.0%
CATCTCAAATATATGAGCGA+AGG + chr1_2:6766694-6766713 None:intergenic 35.0%
ATCTAGTTGGGAAAAACCTT+TGG - chr1_2:6767002-6767021 Msa0052500:CDS 35.0%
! GCATGAAATTTTACCTCAAG+AGG + chr1_2:6767039-6767058 None:intergenic 35.0%
AATCCAACTGGTATCTAGTA+TGG - chr1_2:6767121-6767140 Msa0052500:intron 35.0%
AATCCATACTAGATACCAGT+TGG + chr1_2:6767127-6767146 None:intergenic 35.0%
CATTGGAAACGTAGTAGAAA+TGG + chr1_2:6767154-6767173 None:intergenic 35.0%
ACGTTTCCAATGATCATGAA+AGG - chr1_2:6767162-6767181 Msa0052500:intron 35.0%
! TGGAAGTACATGCACATAAA+AGG + chr1_2:6767204-6767223 None:intergenic 35.0%
GGATGATATCTACAAATCAG+TGG + chr1_2:6767224-6767243 None:intergenic 35.0%
! CAGAACCAATCTCACATTTT+AGG + chr1_2:6767355-6767374 None:intergenic 35.0%
TCTGCAATGCCATTAATTGA+TGG - chr1_2:6767371-6767390 Msa0052500:intron 35.0%
AGGAGTCAACCATCAATTAA+TGG + chr1_2:6767383-6767402 None:intergenic 35.0%
AATTACTAAAGGAACGGGAA+TGG + chr1_2:6767407-6767426 None:intergenic 35.0%
GTGTGTGTGTGTAAGATATA+CGG - chr1_2:6767447-6767466 Msa0052500:intron 35.0%
AAACACTGCATTCATAAGAG+GGG + chr1_2:6767563-6767582 None:intergenic 35.0%
TCAAAACACACTAATTCTCC+TGG - chr1_2:6767762-6767781 Msa0052500:CDS 35.0%
AAAGAGTTCACTTCTTCAGA+GGG - chr1_2:6767818-6767837 Msa0052500:intron 35.0%
CTGCAGGTATTATTACAACA+AGG - chr1_2:6767962-6767981 Msa0052500:intron 35.0%
AGAAATTGTCGGCCAAATAA+TGG + chr1_2:6768064-6768083 None:intergenic 35.0%
GCACATAAAACTATTAGCCA+GGG - chr1_2:6768125-6768144 Msa0052500:intron 35.0%
TAAAACTATTAGCCAGGGAA+TGG - chr1_2:6768130-6768149 Msa0052500:intron 35.0%
! TTGATTTTCAACACTGTACC+GGG + chr1_2:6768575-6768594 None:intergenic 35.0%
! CTTGATTTTCAACACTGTAC+CGG + chr1_2:6768576-6768595 None:intergenic 35.0%
AATACCTCCATATCTTGAAG+AGG + chr1_2:6768631-6768650 None:intergenic 35.0%
TGTTAGGATATATACACAGC+AGG + chr1_2:6768725-6768744 None:intergenic 35.0%
CGTGCATGAATGTTTATGTT+AGG + chr1_2:6768741-6768760 None:intergenic 35.0%
! ACCAATTAAAGCCTTATCCA+TGG + chr1_2:6768986-6769005 None:intergenic 35.0%
AATTACCTTGCAACTCTTGT+AGG - chr1_2:6769019-6769038 Msa0052500:intron 35.0%
! AACCAATGATGGTGAAACTT+TGG - chr1_2:6769100-6769119 Msa0052500:intron 35.0%
TACCAAAGTTTCACCATCAT+TGG + chr1_2:6769105-6769124 None:intergenic 35.0%
CTGTGAATGTTCATTCTGAT+TGG - chr1_2:6769289-6769308 Msa0052500:intron 35.0%
TATAATGCCCTGAAAACACT+TGG - chr1_2:6769432-6769451 Msa0052500:intron 35.0%
TGAAGGATATGATGTAAGGT+CGG + chr1_2:6769517-6769536 None:intergenic 35.0%
ACATCTTTGTGAATTCTTCG+CGG + chr1_2:6769679-6769698 None:intergenic 35.0%
!!! ATTCTTTTTTCAGGAGTGCA+AGG - chr1_2:6769795-6769814 Msa0052500:CDS 35.0%
! GTTGGTGAGAAATTTCAAGA+TGG + chr1_2:6769906-6769925 None:intergenic 35.0%
!! TTGCTGATTCAGTAAATGGT+TGG + chr1_2:6769924-6769943 None:intergenic 35.0%
!! AGCTTTGCTGATTCAGTAAA+TGG + chr1_2:6769928-6769947 None:intergenic 35.0%
CTGTTGAAAGAGTAAGAGAT+CGG - chr1_2:6769982-6770001 Msa0052500:intron 35.0%
TGTTGAAAGAGTAAGAGATC+GGG - chr1_2:6769983-6770002 Msa0052500:intron 35.0%
ATGATATGCCATGCTCAAAA+AGG + chr1_2:6770083-6770102 None:intergenic 35.0%
TTGAGCATGGCATATCATTT+AGG - chr1_2:6770085-6770104 Msa0052500:intron 35.0%
ATGAGACTATAAGAGCTAAC+AGG + chr1_2:6770237-6770256 None:intergenic 35.0%
! TTAATTTTCCGTCACATTGC+AGG - chr1_2:6770572-6770591 Msa0052500:intron 35.0%
AGTATTATCCTGCAATGTGA+CGG + chr1_2:6770583-6770602 None:intergenic 35.0%
TATCAAAGATGTTGCAGAAG+AGG + chr1_2:6770655-6770674 None:intergenic 35.0%
ACCTATCAAGCTAATCAAAG+TGG + chr1_2:6770680-6770699 None:intergenic 35.0%
!! TTTGATTAGCTTGATAGGTC+TGG - chr1_2:6770681-6770700 Msa0052500:intron 35.0%
!! TTGATTAGCTTGATAGGTCT+GGG - chr1_2:6770682-6770701 Msa0052500:intron 35.0%
ATCTTTACCAGCAAGAATGA+TGG - chr1_2:6770707-6770726 Msa0052500:intron 35.0%
TCTTTACCAGCAAGAATGAT+GGG - chr1_2:6770708-6770727 Msa0052500:intron 35.0%
! TGGGAACCATAATTTTGTTG+TGG - chr1_2:6770727-6770746 Msa0052500:intron 35.0%
TGAGGGTCAAATAGGATTAA+CGG - chr1_2:6770787-6770806 Msa0052500:intron 35.0%
AGACCAGTATAAAGACAAGT+TGG + chr1_2:6770872-6770891 None:intergenic 35.0%
TTATAGTTAGTAAAGCTGGG+CGG + chr1_2:6770952-6770971 None:intergenic 35.0%
!! TTTTAGTGGGTATAGATGGA+CGG - chr1_2:6771144-6771163 Msa0052500:intron 35.0%
GTACTCGACACAAATTTAGT+AGG + chr1_2:6771279-6771298 None:intergenic 35.0%
!! TCCTTATTGTTTTGTAGTCC+AGG - chr1_2:6771688-6771707 Msa0052500:intron 35.0%
ACCTGGACTACAAAACAATA+AGG + chr1_2:6771692-6771711 None:intergenic 35.0%
CCCCATTCAATTTATGCATT+TGG - chr1_2:6771808-6771827 Msa0052500:intron 35.0%
TCAATTTATGCATTTGGGTC+GGG - chr1_2:6771814-6771833 Msa0052500:intron 35.0%
TAGAAACTTCGAGGAATAGA+TGG + chr1_2:6771992-6772011 None:intergenic 35.0%
TCTATTCCTCGAAGTTTCTA+TGG - chr1_2:6771992-6772011 Msa0052500:intron 35.0%
GTGGCTGCTTATAATGTTAA+TGG - chr1_2:6772014-6772033 Msa0052500:intron 35.0%
TGACCACTTACTATTTGATC+TGG - chr1_2:6772038-6772057 Msa0052500:intron 35.0%
GACCACTTACTATTTGATCT+GGG - chr1_2:6772039-6772058 Msa0052500:intron 35.0%
AACCCAGATCAAATAGTAAG+TGG + chr1_2:6772044-6772063 None:intergenic 35.0%
ATTCCAAAAGAGTGAACATC+AGG - chr1_2:6772077-6772096 Msa0052500:intron 35.0%
TTCCAAAAGAGTGAACATCA+GGG - chr1_2:6772078-6772097 Msa0052500:intron 35.0%
TATATTCTGCTAAATTCCGC+CGG + chr1_2:6772300-6772319 None:intergenic 35.0%
ATGTACCTTCACAAAATCAC+AGG + chr1_2:6772338-6772357 None:intergenic 35.0%
TAGTCATTGGCGAAAAATTC+AGG - chr1_2:6772455-6772474 Msa0052500:CDS 35.0%
ATTGGCGAAAAATTCAGGAT+CGG - chr1_2:6772460-6772479 Msa0052500:CDS 35.0%
CAATCCGCTATTAATAACAC+TGG + chr1_2:6772569-6772588 None:intergenic 35.0%
TATGAAGTGATGAGAGAAGA+TGG - chr1_2:6772843-6772862 Msa0052500:CDS 35.0%
TAAAATCCACAACCCAGATA+AGG + chr1_2:6772901-6772920 None:intergenic 35.0%
! TTATCTGGGTTGTGGATTTT+AGG - chr1_2:6772900-6772919 Msa0052500:intron 35.0%
! TATCTGGGTTGTGGATTTTA+GGG - chr1_2:6772901-6772920 Msa0052500:intron 35.0%
TAGTGTATCAGCTTTCTTTG+CGG - chr1_2:6773086-6773105 Msa0052500:intron 35.0%
AAAAAACATTTGGTCGGACA+CGG - chr1_2:6773280-6773299 Msa0052500:intron 35.0%
ATGTTACTACTATGAACGTG+TGG + chr1_2:6773694-6773713 None:intergenic 35.0%
!! AGTGGTTGATTTTCTCAATG+TGG - chr1_2:6773748-6773767 Msa0052500:CDS 35.0%
ATCTAAAAAAACCCAGGACA+CGG + chr1_2:6773914-6773933 None:intergenic 35.0%
! GAACCCTCATATTGAGTTTT+AGG + chr1_2:6774125-6774144 None:intergenic 35.0%
CTAGAAGAACATATTGCTGA+TGG - chr1_2:6774355-6774374 Msa0052500:intron 35.0%
TTCTTACTGCTAAAACACAG+TGG - chr1_2:6774380-6774399 Msa0052500:intron 35.0%
TGGTCACAGTGATATTTAGT+TGG - chr1_2:6774438-6774457 Msa0052500:intron 35.0%
CAATGAAAGCTGGCAAAATA+TGG - chr1_2:6774464-6774483 Msa0052500:intron 35.0%
GCTCTATGTAAGTAAGTTGT+TGG - chr1_2:6774714-6774733 Msa0052500:intron 35.0%
!!! GTTGTTGGTTTACTGCTTTT+CGG - chr1_2:6774729-6774748 Msa0052500:intron 35.0%
AAATACTGATGTAGTCGCTA+CGG + chr1_2:6775251-6775270 None:intergenic 35.0%
TATGTTTCAGGAGCCAAAAA+AGG + chr1_2:6775376-6775395 None:intergenic 35.0%
ATTAGAAGGCAAAACAATGC+AGG - chr1_2:6775473-6775492 Msa0052500:intron 35.0%
TTAGAAGGCAAAACAATGCA+GGG - chr1_2:6775474-6775493 Msa0052500:intron 35.0%
GTCCTTGTCAAGTGTTAAAT+TGG - chr1_2:6775822-6775841 Msa0052500:intron 35.0%
TCCCAATTTAACACTTGACA+AGG + chr1_2:6775827-6775846 None:intergenic 35.0%
!! ATGGCTCAGTTATTTTGTGA+CGG - chr1_2:6775952-6775971 Msa0052500:intron 35.0%
! GAAGAAACATCTCTTTGAAG+AGG - chr1_2:6776072-6776091 Msa0052500:intron 35.0%
AGAGTTATTAGAGAGAGCTA+AGG - chr1_2:6776192-6776211 Msa0052500:intron 35.0%
AGTTAGTAAAGTCATCAGCA+AGG + chr1_2:6776252-6776271 None:intergenic 35.0%
TATTACTTCTTCAACATGGG+AGG - chr1_2:6776385-6776404 Msa0052500:intron 35.0%
GAAGGAAAAAGCTAAAGAGA+AGG - chr1_2:6776610-6776629 Msa0052500:intron 35.0%
AGGTTGTGAACAAAACCAAA+AGG + chr1_2:6776680-6776699 None:intergenic 35.0%
!!! TTTTGGTTTTGTTCACAACC+TGG - chr1_2:6776679-6776698 Msa0052500:intron 35.0%
AAATTGCAGCAGATTAAACC+AGG + chr1_2:6776700-6776719 None:intergenic 35.0%
! GTAAGAAGTATGATCCTGAA+AGG + chr1_2:6776835-6776854 None:intergenic 35.0%
CTATTCCAAAACAAACTCAG+TGG - chr1_2:6776862-6776881 Msa0052500:intron 35.0%
ATTCCAAAACAAACTCAGTG+GGG - chr1_2:6776864-6776883 Msa0052500:intron 35.0%
TCTAGTGTAGCTTAGAGATT+AGG - chr1_2:6776918-6776937 Msa0052500:intron 35.0%
GATAAGGTAAACCAAATGCA+GGG + chr1_2:6776985-6777004 None:intergenic 35.0%
AGATAAGGTAAACCAAATGC+AGG + chr1_2:6776986-6777005 None:intergenic 35.0%
! TGCATTTGGTTTACCTTATC+TGG - chr1_2:6776985-6777004 Msa0052500:intron 35.0%
! GCATTTGGTTTACCTTATCT+GGG - chr1_2:6776986-6777005 Msa0052500:intron 35.0%
! CATTTGGTTTACCTTATCTG+GGG - chr1_2:6776987-6777006 Msa0052500:intron 35.0%
AGAGAAGGAGAAAAAAGAGA+AGG - chr1_2:6777083-6777102 Msa0052500:intron 35.0%
AAGAGAGAAAACATCGAAGA+AGG - chr1_2:6777226-6777245 Msa0052500:intron 35.0%
! GGATTCTGAAAAAGATGAGA+AGG - chr1_2:6777272-6777291 Msa0052500:intron 35.0%
TAGGCATAAAAGACACAAGA+GGG - chr1_2:6777476-6777495 Msa0052500:intron 35.0%
CAATATTCTCCAAAAGATGC+AGG + chr1_2:6777627-6777646 None:intergenic 35.0%
TGTGAAGTCATGGGAACAAA+TGG + chr1_2:6764256-6764275 None:intergenic 40.0%
CCGAATTGTTGTGAAGTCAT+GGG + chr1_2:6764265-6764284 None:intergenic 40.0%
CCCATGACTTCACAACAATT+CGG - chr1_2:6764262-6764281 Msa0052500:three_prime_UTR 40.0%
TCCGAATTGTTGTGAAGTCA+TGG + chr1_2:6764266-6764285 None:intergenic 40.0%
AATTGCTGACCTTGAATAGC+AGG + chr1_2:6764328-6764347 None:intergenic 40.0%
! TGATGATGAAACAGGATGAC+CGG + chr1_2:6764398-6764417 None:intergenic 40.0%
TCATCCTGTTTCATCATCAC+AGG - chr1_2:6764399-6764418 Msa0052500:three_prime_UTR 40.0%
CATCCTGTTTCATCATCACA+GGG - chr1_2:6764400-6764419 Msa0052500:three_prime_UTR 40.0%
! ATACCCTGTGATGATGAAAC+AGG + chr1_2:6764406-6764425 None:intergenic 40.0%
ACAGTGTATAGAGATTGAGG+AGG + chr1_2:6764541-6764560 None:intergenic 40.0%
CGTACAGTGTATAGAGATTG+AGG + chr1_2:6764544-6764563 None:intergenic 40.0%
AACTAGTAATCTACAACGGG+AGG + chr1_2:6764592-6764611 None:intergenic 40.0%
CCAAATCTGAATCACCATCT+TGG + chr1_2:6765013-6765032 None:intergenic 40.0%
CCAAGATGGTGATTCAGATT+TGG - chr1_2:6765010-6765029 Msa0052500:CDS 40.0%
CAGATTTGGAAGAAAGGAAG+TGG - chr1_2:6765024-6765043 Msa0052500:CDS 40.0%
GCAGTGTTAAGCTAGTAAAG+AGG - chr1_2:6765076-6765095 Msa0052500:intron 40.0%
GTTAAAATTAAGTAGGGGGG+GGG - chr1_2:6765141-6765160 Msa0052500:intron 40.0%
TAACTTCTCTGCTGCATCTT+GGG + chr1_2:6765442-6765461 None:intergenic 40.0%
ATAACTTCTCTGCTGCATCT+TGG + chr1_2:6765443-6765462 None:intergenic 40.0%
CACTAACTAAAACTTGAGGG+AGG - chr1_2:6765547-6765566 Msa0052500:CDS 40.0%
ATCATTACGAGTCAATAGGG+AGG - chr1_2:6765592-6765611 Msa0052500:intron 40.0%
!!! AGTTTTGAATGTGAGATCGG+AGG - chr1_2:6765618-6765637 Msa0052500:intron 40.0%
!! GTTTTGAATGTGAGATCGGA+GGG - chr1_2:6765619-6765638 Msa0052500:intron 40.0%
!! GGAGGGTATTTGAAGGAAAA+GGG - chr1_2:6765636-6765655 Msa0052500:intron 40.0%
! GGAAAAGGGATAGATTGGTT+AGG - chr1_2:6765650-6765669 Msa0052500:intron 40.0%
AAAGAGAGTTGCAGTTTGTG+AGG - chr1_2:6765707-6765726 Msa0052500:CDS 40.0%
AGTTGCAGTTTGTGAGGATA+GGG - chr1_2:6765713-6765732 Msa0052500:CDS 40.0%
GGGGGTTCACAAAAAAACTA+CGG + chr1_2:6765873-6765892 None:intergenic 40.0%
AGAAACATGCAATGAAGCTG+GGG + chr1_2:6765892-6765911 None:intergenic 40.0%
CAGAAACATGCAATGAAGCT+GGG + chr1_2:6765893-6765912 None:intergenic 40.0%
TCTTCGTCATCTCACAACAA+TGG + chr1_2:6766054-6766073 None:intergenic 40.0%
CGAAGAACAGAAATTGACAG+AGG - chr1_2:6766068-6766087 Msa0052500:intron 40.0%
! CCAACTCAACTAAGTGTTGT+GGG - chr1_2:6766166-6766185 Msa0052500:intron 40.0%
!! AGTTTCTGGTGAGATCACTA+AGG + chr1_2:6766236-6766255 None:intergenic 40.0%
! TAAGGTAGTCATGTCGTTTG+AGG - chr1_2:6766419-6766438 Msa0052500:intron 40.0%
CCTACTCTTCCTTACAAAAC+CGG - chr1_2:6766546-6766565 Msa0052500:intron 40.0%
! TCCTTACAAAACCGGCTTAA+AGG - chr1_2:6766554-6766573 Msa0052500:intron 40.0%
!! ACCTTTAAGCCGGTTTTGTA+AGG + chr1_2:6766558-6766577 None:intergenic 40.0%
AGAGTACAAGGCAATCTAGT+TGG - chr1_2:6766989-6767008 Msa0052500:CDS 40.0%
GAGTACAAGGCAATCTAGTT+GGG - chr1_2:6766990-6767009 Msa0052500:CDS 40.0%
AATGTTGCGTTCAATCCAAC+TGG - chr1_2:6767109-6767128 Msa0052500:intron 40.0%
TGTAGATATCATCCCAAGTC+AGG - chr1_2:6767230-6767249 Msa0052500:intron 40.0%
GAAAGAGTTCACTTCTTCAG+AGG - chr1_2:6767817-6767836 Msa0052500:intron 40.0%
AGGTTACTCAGCAATCAGTA+TGG - chr1_2:6767982-6768001 Msa0052500:intron 40.0%
GACAATACCAGAAGAACTCA+AGG - chr1_2:6768004-6768023 Msa0052500:intron 40.0%
CCATATACCTTGAGTTCTTC+TGG + chr1_2:6768014-6768033 None:intergenic 40.0%
CCAGAAGAACTCAAGGTATA+TGG - chr1_2:6768011-6768030 Msa0052500:intron 40.0%
!!! TAGTTTTATGTGCCTGCTCA+CGG + chr1_2:6768118-6768137 None:intergenic 40.0%
GGCACATAAAACTATTAGCC+AGG - chr1_2:6768124-6768143 Msa0052500:intron 40.0%
!! TCCAACACTTTGAGACCTAA+TGG - chr1_2:6768230-6768249 Msa0052500:intron 40.0%
ACCATTAGGTCTCAAAGTGT+TGG + chr1_2:6768234-6768253 None:intergenic 40.0%
CAACTGGTGTAACAGAAGAT+GGG + chr1_2:6768268-6768287 None:intergenic 40.0%
ACAACTGGTGTAACAGAAGA+TGG + chr1_2:6768269-6768288 None:intergenic 40.0%
TGATTATCAGTGGCAACAAC+TGG + chr1_2:6768284-6768303 None:intergenic 40.0%
! AACTGGTCGTTGATTATCAG+TGG + chr1_2:6768294-6768313 None:intergenic 40.0%
GATAATCAACGACCAGTTTC+TGG - chr1_2:6768296-6768315 Msa0052500:intron 40.0%
! ACCAGTTTCTGGATTATCAG+TGG - chr1_2:6768307-6768326 Msa0052500:intron 40.0%
ACCACTGATAATCCAGAAAC+TGG + chr1_2:6768311-6768330 None:intergenic 40.0%
GCTTGAAGTAACGACAGAAT+GGG + chr1_2:6768342-6768361 None:intergenic 40.0%
TGCTTGAAGTAACGACAGAA+TGG + chr1_2:6768343-6768362 None:intergenic 40.0%
CACGATTCTACTTCTGTCAA+TGG - chr1_2:6768601-6768620 Msa0052500:intron 40.0%
TTATTTGAACCATGCAGCCA+TGG - chr1_2:6768966-6768985 Msa0052500:intron 40.0%
! GCCATGGATAAGGCTTTAAT+TGG - chr1_2:6768982-6769001 Msa0052500:intron 40.0%
CTCTTGTAGGAAGCCAAAAA+AGG - chr1_2:6769032-6769051 Msa0052500:intron 40.0%
!!! AACCACAGGAACTCCTTTTT+TGG + chr1_2:6769048-6769067 None:intergenic 40.0%
AAAAAAGGAGTTCCTGTGGT+TGG - chr1_2:6769047-6769066 Msa0052500:intron 40.0%
!! ACATTAGTTTGTCCAACCAC+AGG + chr1_2:6769062-6769081 None:intergenic 40.0%
AACTAATGTGACTCCTTCAG+AGG - chr1_2:6769073-6769092 Msa0052500:intron 40.0%
!!! TCATTGGTTTTCTCCTCTGA+AGG + chr1_2:6769089-6769108 None:intergenic 40.0%
TCAGAGGAGAAAACCAATGA+TGG - chr1_2:6769089-6769108 Msa0052500:intron 40.0%
ATGTTCATTCTGATTGGACG+TGG - chr1_2:6769295-6769314 Msa0052500:intron 40.0%
TGTTCATTCTGATTGGACGT+GGG - chr1_2:6769296-6769315 Msa0052500:intron 40.0%
GATATGCATAGTCCCATATG+AGG + chr1_2:6769495-6769514 None:intergenic 40.0%
AAGCCAGATAAAACGGTATG+CGG + chr1_2:6769565-6769584 None:intergenic 40.0%
CCTTTGACCCAAATACTGAA+TGG + chr1_2:6769612-6769631 None:intergenic 40.0%
CCATTCAGTATTTGGGTCAA+AGG - chr1_2:6769609-6769628 Msa0052500:intron 40.0%
CATCTTTGTGAATTCTTCGC+GGG + chr1_2:6769678-6769697 None:intergenic 40.0%
AGCTAACATCATCCACAAGA+TGG - chr1_2:6769818-6769837 Msa0052500:CDS 40.0%
TAACATCATCCACAAGATGG+AGG - chr1_2:6769821-6769840 Msa0052500:CDS 40.0%
!! CACATGAACCTTTTTGAGCA+TGG - chr1_2:6770072-6770091 Msa0052500:intron 40.0%
AAGGTTTATGGAGCTTCCTT+GGG + chr1_2:6770124-6770143 None:intergenic 40.0%
AAAGGTTTATGGAGCTTCCT+TGG + chr1_2:6770125-6770144 None:intergenic 40.0%
!! GCCACTTTGATTAGCTTGAT+AGG - chr1_2:6770676-6770695 Msa0052500:intron 40.0%
!! TGATTAGCTTGATAGGTCTG+GGG - chr1_2:6770683-6770702 Msa0052500:intron 40.0%
GAGGGTCAAATAGGATTAAC+GGG - chr1_2:6770788-6770807 Msa0052500:intron 40.0%
ACGGGTATTCAAATTTCGGT+TGG - chr1_2:6770806-6770825 Msa0052500:intron 40.0%
CGGGTATTCAAATTTCGGTT+GGG - chr1_2:6770807-6770826 Msa0052500:intron 40.0%
TTCAAATTTCGGTTGGGAGT+TGG - chr1_2:6770813-6770832 Msa0052500:intron 40.0%
GGACCAACTTGTCTTTATAC+TGG - chr1_2:6770866-6770885 Msa0052500:intron 40.0%
CTATTTCAGTGTGGCCATAT+AGG - chr1_2:6771175-6771194 Msa0052500:intron 40.0%
! TTGGCCATGAACTTGGATTT+TGG + chr1_2:6771599-6771618 None:intergenic 40.0%
GTAGCTTCTCTGATGTTACA+CGG - chr1_2:6771654-6771673 Msa0052500:intron 40.0%
CAATTTATGCATTTGGGTCG+GGG - chr1_2:6771815-6771834 Msa0052500:intron 40.0%
ATTCCTCGAAGTTTCTATGG+TGG - chr1_2:6771995-6772014 Msa0052500:intron 40.0%
ATCGGCCAATGCTCATTATT+AGG + chr1_2:6772152-6772171 None:intergenic 40.0%
GGCGGAATTTAGCAGAATAT+AGG - chr1_2:6772299-6772318 Msa0052500:CDS 40.0%
AAAAATTCAGGATCGGCTAG+AGG - chr1_2:6772467-6772486 Msa0052500:CDS 40.0%
TTACCTGGAAAACAAGCAAG+CGG + chr1_2:6772527-6772546 None:intergenic 40.0%
!! TAGCGGATTGCAGAAAATAG+CGG - chr1_2:6772579-6772598 Msa0052500:intron 40.0%
! ATCTGGGTTGTGGATTTTAG+GGG - chr1_2:6772902-6772921 Msa0052500:intron 40.0%
ATCAAGTCGGTGATGAGATT+GGG + chr1_2:6772938-6772957 None:intergenic 40.0%
AAAAGTCACCACTATTGCAG+TGG - chr1_2:6773049-6773068 Msa0052500:CDS 40.0%
CAAATCCCGATGTGTAATAG+CGG - chr1_2:6773115-6773134 Msa0052500:intron 40.0%
CTATACCGCTATTACACATC+GGG + chr1_2:6773123-6773142 None:intergenic 40.0%
GCTATACCGCTATTACACAT+CGG + chr1_2:6773124-6773143 None:intergenic 40.0%
TTATCTATGATGCACAGACG+CGG - chr1_2:6773157-6773176 Msa0052500:intron 40.0%
TTAGAACCAAGAAGAAGGGA+AGG + chr1_2:6773454-6773473 None:intergenic 40.0%
CGGCTAATCTAAAAAAACCC+AGG + chr1_2:6773920-6773939 None:intergenic 40.0%
CTATGAAAAAACCCAGGACA+CGG + chr1_2:6773971-6773990 None:intergenic 40.0%
GCAATATCTCTAGCCAATGT+TGG + chr1_2:6774040-6774059 None:intergenic 40.0%
! GTACTGATACTAACTTTGGC+AGG - chr1_2:6774148-6774167 Msa0052500:intron 40.0%
! CTATATTCGTGACTTGGAGA+AGG - chr1_2:6774172-6774191 Msa0052500:intron 40.0%
TAGTTGGTCACAATGAAAGC+TGG - chr1_2:6774454-6774473 Msa0052500:intron 40.0%
GAAAGCTGGCAAAATATGGA+AGG - chr1_2:6774468-6774487 Msa0052500:intron 40.0%
GATGCAACAGCTTGATATTG+AGG + chr1_2:6774535-6774554 None:intergenic 40.0%
GCTGTTGCATCAAATACATC+CGG - chr1_2:6774544-6774563 Msa0052500:intron 40.0%
!! AGAGTGTGTTGGTTGATGAA+AGG + chr1_2:6774760-6774779 None:intergenic 40.0%
AAATAGGACAAAGCCAGAAC+AGG + chr1_2:6774799-6774818 None:intergenic 40.0%
AGATATACTTAAGTCGGGCA+AGG - chr1_2:6775129-6775148 Msa0052500:CDS 40.0%
ACACAAGGAAGATCTTTCTG+AGG + chr1_2:6775159-6775178 None:intergenic 40.0%
GTGATCTACTCGAATGGAAA+GGG + chr1_2:6775229-6775248 None:intergenic 40.0%
AGCGACTACATCAGTATTTG+AGG - chr1_2:6775252-6775271 Msa0052500:intron 40.0%
CTCACATATTATGGGACAGA+GGG + chr1_2:6775734-6775753 None:intergenic 40.0%
!! CTCAGTTATTTTGTGACGGA+GGG - chr1_2:6775956-6775975 Msa0052500:intron 40.0%
ATGGAATCTCTTGTGCATGT+TGG - chr1_2:6776050-6776069 Msa0052500:intron 40.0%
ATTAGAGAGAGCTAAGGAGA+AGG - chr1_2:6776198-6776217 Msa0052500:intron 40.0%
ACGTAAGCGTGAAGAAGAAA+AGG - chr1_2:6776634-6776653 Msa0052500:intron 40.0%
TAGAGATTAGGTTCCTGTAC+AGG - chr1_2:6776930-6776949 Msa0052500:intron 40.0%
CAAATGCAGGGAAATATTCC+TGG + chr1_2:6776973-6776992 None:intergenic 40.0%
CAGGAATATTTCCCTGCATT+TGG - chr1_2:6776971-6776990 Msa0052500:intron 40.0%
TCAGATATTGACCCCAGATA+AGG + chr1_2:6777001-6777020 None:intergenic 40.0%
TCTTCTCCTCTCTATAACCA+TGG + chr1_2:6777191-6777210 None:intergenic 40.0%
TCTAGAAAATCGCGAAGACA+TGG - chr1_2:6777300-6777319 Msa0052500:intron 40.0%
ATACCTTCCTAGACTTCTTG+CGG + chr1_2:6777332-6777351 None:intergenic 40.0%
! AAGTCTAGGAAGGTATGGAA+TGG - chr1_2:6777336-6777355 Msa0052500:CDS 40.0%
GTAGGCATAAAAGACACAAG+AGG - chr1_2:6777475-6777494 Msa0052500:intron 40.0%
! AGAACTTCACCTGCATCTTT+TGG - chr1_2:6777615-6777634 Msa0052500:CDS 40.0%
GCGTGTACATGAAAAGTAGA+AGG + chr1_2:6777669-6777688 None:intergenic 40.0%
ATGTACACGCCTGTGAATTT+AGG - chr1_2:6777679-6777698 Msa0052500:CDS 40.0%
TTTGTGGCCTACATTACTCT+TGG + chr1_2:6777771-6777790 None:intergenic 40.0%
GAAGTCATGGGAACAAATGG+TGG + chr1_2:6764253-6764272 None:intergenic 45.0%
TCACAACAATTCGGACATGC+AGG - chr1_2:6764271-6764290 Msa0052500:three_prime_UTR 45.0%
CACAACAATTCGGACATGCA+GGG - chr1_2:6764272-6764291 Msa0052500:three_prime_UTR 45.0%
GCCGTTCCTTCATCTAATGT+CGG - chr1_2:6764298-6764317 Msa0052500:three_prime_UTR 45.0%
CCCGACATTAGATGAAGGAA+CGG + chr1_2:6764302-6764321 None:intergenic 45.0%
CCGTTCCTTCATCTAATGTC+GGG - chr1_2:6764299-6764318 Msa0052500:three_prime_UTR 45.0%
GATGATGAAACAGGATGACC+GGG + chr1_2:6764397-6764416 None:intergenic 45.0%
TGTTGTGGAACAGATGTCAG+TGG + chr1_2:6764457-6764476 None:intergenic 45.0%
GTTCACACCATCTTATGGTC+AGG - chr1_2:6764660-6764679 Msa0052500:CDS 45.0%
TTCCAATAGAACGGCCAAGA+TGG - chr1_2:6764996-6765015 Msa0052500:CDS 45.0%
TTTGGAAGAAAGGAAGTGGC+AGG - chr1_2:6765028-6765047 Msa0052500:CDS 45.0%
TTGGAAGAAAGGAAGTGGCA+GGG - chr1_2:6765029-6765048 Msa0052500:CDS 45.0%
AATTGCACAAACCTCCCTTG+AGG + chr1_2:6765216-6765235 None:intergenic 45.0%
TGATTCATTCACTGACCCTC+CGG + chr1_2:6765576-6765595 None:intergenic 45.0%
ATTACGAGTCAATAGGGAGG+AGG - chr1_2:6765595-6765614 Msa0052500:intron 45.0%
!! TGAGATCGGAGGGTATTTGA+AGG - chr1_2:6765629-6765648 Msa0052500:intron 45.0%
!! CGGAGGGTATTTGAAGGAAA+AGG - chr1_2:6765635-6765654 Msa0052500:intron 45.0%
GGTCAGAGGAGGACTAAATT+TGG - chr1_2:6765681-6765700 Msa0052500:intron 45.0%
GAGTTGCAGTTTGTGAGGAT+AGG - chr1_2:6765712-6765731 Msa0052500:CDS 45.0%
CAGTTTGTGAGGATAGGGAT+AGG - chr1_2:6765718-6765737 Msa0052500:CDS 45.0%
CGTGAGAGCTTGAGTTTCAT+AGG - chr1_2:6765743-6765762 Msa0052500:intron 45.0%
TACAGATGTTGCCTGAGTGA+GGG - chr1_2:6765805-6765824 Msa0052500:intron 45.0%
GAAACATGCAATGAAGCTGG+GGG + chr1_2:6765891-6765910 None:intergenic 45.0%
CCAGAAACATGCAATGAAGC+TGG + chr1_2:6765894-6765913 None:intergenic 45.0%
CCAGCTTCATTGCATGTTTC+TGG - chr1_2:6765891-6765910 Msa0052500:CDS 45.0%
ATTATCAGGTATGCAGCTGC+AGG - chr1_2:6766139-6766158 Msa0052500:intron 45.0%
! GCCAACTCAACTAAGTGTTG+TGG - chr1_2:6766165-6766184 Msa0052500:intron 45.0%
CCCACAACACTTAGTTGAGT+TGG + chr1_2:6766169-6766188 None:intergenic 45.0%
AATCTTTCCTCACACCCCTT+GGG + chr1_2:6766336-6766355 None:intergenic 45.0%
TAATCTTTCCTCACACCCCT+TGG + chr1_2:6766337-6766356 None:intergenic 45.0%
!! CCGGTTTTGTAAGGAAGAGT+AGG + chr1_2:6766549-6766568 None:intergenic 45.0%
! ACAAAACCGGCTTAAAGGTG+AGG - chr1_2:6766559-6766578 Msa0052500:intron 45.0%
! CAAAACCGGCTTAAAGGTGA+GGG - chr1_2:6766560-6766579 Msa0052500:intron 45.0%
AGATGCAGAGTTGTTGCTAG+TGG + chr1_2:6766762-6766781 None:intergenic 45.0%
GCAACAACTCTGCATCTGAT+TGG - chr1_2:6766765-6766784 Msa0052500:intron 45.0%
! AAGAGCATACTGCTGGTGAT+GGG - chr1_2:6766789-6766808 Msa0052500:intron 45.0%
AGAGGTGACATCAACTCCAA+AGG + chr1_2:6767021-6767040 None:intergenic 45.0%
GCTCTATATGGTCACTGTGA+AGG - chr1_2:6767269-6767288 Msa0052500:intron 45.0%
TATATGGTCACTGTGAAGGC+TGG - chr1_2:6767273-6767292 Msa0052500:intron 45.0%
ATATGGTCACTGTGAAGGCT+GGG - chr1_2:6767274-6767293 Msa0052500:intron 45.0%
ACTAAAGGAACGGGAATGGA+AGG + chr1_2:6767403-6767422 None:intergenic 45.0%
AATTCTCCTGGATGTGACAG+AGG - chr1_2:6767774-6767793 Msa0052500:CDS 45.0%
ATTCTCCTGGATGTGACAGA+GGG - chr1_2:6767775-6767794 Msa0052500:CDS 45.0%
!!! TTTTGACTGTGACTTGCTGC+AGG - chr1_2:6767946-6767965 Msa0052500:intron 45.0%
!! AGTTTTATGTGCCTGCTCAC+GGG + chr1_2:6768117-6768136 None:intergenic 45.0%
!! TTGTTTCTGACACCATTCCC+TGG + chr1_2:6768145-6768164 None:intergenic 45.0%
GTCGTTACTTCAAGCACCAT+AGG - chr1_2:6768347-6768366 Msa0052500:intron 45.0%
CTCACAGTTACAACAGTGCT+TGG + chr1_2:6768380-6768399 None:intergenic 45.0%
! TGGAGCACCTCTTCAAGATA+TGG - chr1_2:6768621-6768640 Msa0052500:intron 45.0%
AGCACCTCTTCAAGATATGG+AGG - chr1_2:6768624-6768643 Msa0052500:intron 45.0%
CACAGCAGGTATCTCCAAAT+AGG + chr1_2:6768711-6768730 None:intergenic 45.0%
AGCCAAAAAAGGAGTTCCTG+TGG - chr1_2:6769043-6769062 Msa0052500:intron 45.0%
! TCGCTCACCAAGTGTTTTCA+GGG + chr1_2:6769442-6769461 None:intergenic 45.0%
! TTCGCTCACCAAGTGTTTTC+AGG + chr1_2:6769443-6769462 None:intergenic 45.0%
GCGAAAACAAGCTTTCAACG+AGG - chr1_2:6769458-6769477 Msa0052500:intron 45.0%
AGAAGCTAGAGGCTGAAGAA+AGG - chr1_2:6769633-6769652 Msa0052500:intron 45.0%
! CATGGTGGAACTTGAGAGAA+AGG - chr1_2:6770025-6770044 Msa0052500:intron 45.0%
AGGTCTATTGTTGGTACCCA+AGG - chr1_2:6770105-6770124 Msa0052500:intron 45.0%
!!! TTTATTTTGTTGGTGGGGGC+AGG - chr1_2:6770204-6770223 Msa0052500:intron 45.0%
!! GAGGAGTTGAAGTATCGCAT+TGG - chr1_2:6770304-6770323 Msa0052500:intron 45.0%
!! GATTAGCTTGATAGGTCTGG+GGG - chr1_2:6770684-6770703 Msa0052500:intron 45.0%
ATGGTTCCCATCATTCTTGC+TGG + chr1_2:6770717-6770736 None:intergenic 45.0%
!! TGGTCTTATGCTGACTTGCT+GGG - chr1_2:6770886-6770905 Msa0052500:intron 45.0%
!! TTGTTGACTTGCTGCTCGAT+GGG + chr1_2:6771453-6771472 None:intergenic 45.0%
AATGGCAATCAAGCTACCCT+AGG + chr1_2:6771719-6771738 None:intergenic 45.0%
! TGCCCTGATGTTCACTCTTT+TGG + chr1_2:6772083-6772102 None:intergenic 45.0%
! GGATTTTCCACCCCAATATG+TGG + chr1_2:6772114-6772133 None:intergenic 45.0%
GGAAAAGGAAAATGCTGCTG+AGG - chr1_2:6772270-6772289 Msa0052500:intron 45.0%
AAAATGCTGCTGAGGAACAC+CGG - chr1_2:6772278-6772297 Msa0052500:intron 45.0%
! GGAGTCCTGTGATTTTGTGA+AGG - chr1_2:6772330-6772349 Msa0052500:intron 45.0%
! AAATAGTGGAAGCTGCACAG+CGG - chr1_2:6772625-6772644 Msa0052500:intron 45.0%
AGTGATGAGAGAAGATGGAG+AGG - chr1_2:6772848-6772867 Msa0052500:CDS 45.0%
AGAGGTAGTTTAGTGACGAG+AGG - chr1_2:6772872-6772891 Msa0052500:intron 45.0%
TGACGAGAGGTTACCTTATC+TGG - chr1_2:6772885-6772904 Msa0052500:intron 45.0%
GACGAGAGGTTACCTTATCT+GGG - chr1_2:6772886-6772905 Msa0052500:intron 45.0%
AGGTTACCTTATCTGGGTTG+TGG - chr1_2:6772892-6772911 Msa0052500:intron 45.0%
CATCAAGTCGGTGATGAGAT+TGG + chr1_2:6772939-6772958 None:intergenic 45.0%
CGCTATTACACATCGGGATT+TGG + chr1_2:6773117-6773136 None:intergenic 45.0%
GGTTTACACCAGAGCAATGT+CGG + chr1_2:6773308-6773327 None:intergenic 45.0%
GCAAAGCAGAGGAACAGAAA+CGG + chr1_2:6773506-6773525 None:intergenic 45.0%
AACACAAAGCAGCAAAGCAG+AGG + chr1_2:6773517-6773536 None:intergenic 45.0%
!!! TGTGGTGGTGGTCATGTTTT+TGG + chr1_2:6773544-6773563 None:intergenic 45.0%
CAAAGTCACAAAACGTGTGG+TGG + chr1_2:6773559-6773578 None:intergenic 45.0%
GGACAAAGTCACAAAACGTG+TGG + chr1_2:6773562-6773581 None:intergenic 45.0%
ACTACTATGAACGTGTGGTG+TGG + chr1_2:6773689-6773708 None:intergenic 45.0%
!!! CGTGTCCTGGGTTTTTTCAT+AGG - chr1_2:6773969-6773988 Msa0052500:CDS 45.0%
!!! GTCCTGGGTTTTTTCATAGG+CGG - chr1_2:6773972-6773991 Msa0052500:CDS 45.0%
AACCGCCTATGAAAAAACCC+AGG + chr1_2:6773977-6773996 None:intergenic 45.0%
GCAGGACTATATTCGTGACT+TGG - chr1_2:6774166-6774185 Msa0052500:intron 45.0%
! TATTCGTGACTTGGAGAAGG+AGG - chr1_2:6774175-6774194 Msa0052500:intron 45.0%
TGATATAGGAACGAGTCCGT+CGG - chr1_2:6774296-6774315 Msa0052500:CDS 45.0%
GCAACTTGCGAAATGCATCA+CGG + chr1_2:6774336-6774355 None:intergenic 45.0%
GTGGCGAGATTATTGCTTGA+AGG - chr1_2:6774399-6774418 Msa0052500:intron 45.0%
CAACCAACACACTCTCTCTT+TGG - chr1_2:6774765-6774784 Msa0052500:intron 45.0%
! ACTCCAAAGAGAGAGTGTGT+TGG + chr1_2:6774771-6774790 None:intergenic 45.0%
! TTTGGAGTGACATCCTGTTC+TGG - chr1_2:6774783-6774802 Msa0052500:intron 45.0%
ATACTTAAGTCGGGCAAGGT+AGG - chr1_2:6775133-6775152 Msa0052500:CDS 45.0%
ATCTACTCGAATGGAAAGGG+AGG + chr1_2:6775226-6775245 None:intergenic 45.0%
GGTGATCTACTCGAATGGAA+AGG + chr1_2:6775230-6775249 None:intergenic 45.0%
GCTCACATATTATGGGACAG+AGG + chr1_2:6775735-6775754 None:intergenic 45.0%
!! GCTCAGTTATTTTGTGACGG+AGG - chr1_2:6775955-6775974 Msa0052500:intron 45.0%
TAAAGTCATCAGCAAGGCGT+TGG + chr1_2:6776246-6776265 None:intergenic 45.0%
TTCAACATGGGAGGAATGCA+AGG - chr1_2:6776394-6776413 Msa0052500:intron 45.0%
!! GGAATGCAAGGCACTTTTTG+AGG - chr1_2:6776406-6776425 Msa0052500:intron 45.0%
!! TCACCCCACTGAGTTTGTTT+TGG + chr1_2:6776870-6776889 None:intergenic 45.0%
TGACAGCCATGGTTATAGAG+AGG - chr1_2:6777182-6777201 Msa0052500:intron 45.0%
!! AAGAAGGCATCAGAGCAGTA+TGG - chr1_2:6777242-6777261 Msa0052500:intron 45.0%
GCAAGAAGTCTAGGAAGGTA+TGG - chr1_2:6777331-6777350 Msa0052500:CDS 45.0%
TCTCCTGAGTCAGACAATGA+AGG - chr1_2:6777453-6777472 Msa0052500:intron 45.0%
CTACCTTCATTGTCTGACTC+AGG + chr1_2:6777459-6777478 None:intergenic 45.0%
CTGAGTCAGACAATGAAGGT+AGG - chr1_2:6777457-6777476 Msa0052500:intron 45.0%
AAAAGACACAAGAGGGACCA+CGG - chr1_2:6777483-6777502 Msa0052500:intron 45.0%
TGGAATGAGGAGCTTGAAGA+TGG - chr1_2:6777528-6777547 Msa0052500:intron 45.0%
GGAATGAGGAGCTTGAAGAT+GGG - chr1_2:6777529-6777548 Msa0052500:intron 45.0%
GAATGAGGAGCTTGAAGATG+GGG - chr1_2:6777530-6777549 Msa0052500:intron 45.0%
!! ATAAATTTAATTCATTATAT+TGG + chr1_2:6766638-6766657 None:intergenic 5.0%
CAGTCATTCATGCGCAGCAA+GGG - chr1_2:6764227-6764246 Msa0052500:three_prime_UTR 50.0%
GGCATCCCGACATTAGATGA+AGG + chr1_2:6764307-6764326 None:intergenic 50.0%
GCTCCAAGACAAATTCAGCC+CGG - chr1_2:6764376-6764395 Msa0052500:three_prime_UTR 50.0%
TGACCGGGCTGAATTTGTCT+TGG + chr1_2:6764382-6764401 None:intergenic 50.0%
!! ACAGCTTGCTGTGCATGTTG+TGG + chr1_2:6764472-6764491 None:intergenic 50.0%
! ATGCATGGCTTGCCTGTTTC+TGG - chr1_2:6764511-6764530 Msa0052500:three_prime_UTR 50.0%
GGCAATGCCTGACCATAAGA+TGG + chr1_2:6764670-6764689 None:intergenic 50.0%
TTGAGGCGGATGCTGGTATT+GGG + chr1_2:6764692-6764711 None:intergenic 50.0%
! TTTGAGGCGGATGCTGGTAT+TGG + chr1_2:6764693-6764712 None:intergenic 50.0%
AGCTGTAACGTCTGTACAGC+CGG - chr1_2:6764768-6764787 Msa0052500:intron 50.0%
CCAGATGATTGAACTCCAGC+CGG + chr1_2:6764790-6764809 None:intergenic 50.0%
CACCATCTTGGCCGTTCTAT+TGG + chr1_2:6765001-6765020 None:intergenic 50.0%
AAAGGAAGTGGCAGGGAACT+TGG - chr1_2:6765036-6765055 Msa0052500:CDS 50.0%
TAAAACTTGAGGGAGGGCTC+CGG - chr1_2:6765554-6765573 Msa0052500:CDS 50.0%
GTTAGGCATGTTTGGGTCAG+AGG - chr1_2:6765667-6765686 Msa0052500:intron 50.0%
AGGTTGCGTTGCACAAAGAG+AGG - chr1_2:6765763-6765782 Msa0052500:intron 50.0%
GGTTGCGTTGCACAAAGAGA+GGG - chr1_2:6765764-6765783 Msa0052500:intron 50.0%
CTCACTCAGGCAACATCTGT+AGG + chr1_2:6765806-6765825 None:intergenic 50.0%
CTACAGATGTTGCCTGAGTG+AGG - chr1_2:6765804-6765823 Msa0052500:intron 50.0%
AGGTGCGATCGCATCTAAGT+AGG + chr1_2:6765974-6765993 None:intergenic 50.0%
! GATTGGCAAGAGCATACTGC+TGG - chr1_2:6766782-6766801 Msa0052500:intron 50.0%
! CAAGAGCATACTGCTGGTGA+TGG - chr1_2:6766788-6766807 Msa0052500:intron 50.0%
!! ATACTGCTGGTGATGGGAGA+AGG - chr1_2:6766795-6766814 Msa0052500:CDS 50.0%
!! CTGGTGATGGGAGAAGGTAT+TGG - chr1_2:6766801-6766820 Msa0052500:CDS 50.0%
!! GGAGTTGATGTCACCTCTTG+AGG - chr1_2:6767023-6767042 Msa0052500:intron 50.0%
TATGGTCACTGTGAAGGCTG+GGG - chr1_2:6767275-6767294 Msa0052500:intron 50.0%
GGGTTGCACTTTCTCAAGTC+AGG - chr1_2:6767295-6767314 Msa0052500:intron 50.0%
GGGCTGATGCATCAACTGTT+TGG - chr1_2:6767795-6767814 Msa0052500:CDS 50.0%
! AGTTGATGTTGCAGCAGAGG+AGG + chr1_2:6768189-6768208 None:intergenic 50.0%
!! TGGAGTTGATGTTGCAGCAG+AGG + chr1_2:6768192-6768211 None:intergenic 50.0%
TTGGAGCTAGCTGCATTAGC+TGG + chr1_2:6768215-6768234 None:intergenic 50.0%
GGGCTTGAAGCAAGACCATT+AGG + chr1_2:6768248-6768267 None:intergenic 50.0%
! AGTGCTTGGTTCGACTCCTA+TGG + chr1_2:6768366-6768385 None:intergenic 50.0%
AAGCTTCCTGCAACTGCTGT+AGG + chr1_2:6768410-6768429 None:intergenic 50.0%
ACAGCAGTTGCAGGAAGCTT+AGG - chr1_2:6768410-6768429 Msa0052500:intron 50.0%
GAACCATGCAGCCATGGATA+AGG - chr1_2:6768972-6768991 Msa0052500:intron 50.0%
! AAGCCTTATCCATGGCTGCA+TGG + chr1_2:6768978-6768997 None:intergenic 50.0%
GGCTTCCTACAAGAGTTGCA+AGG + chr1_2:6769027-6769046 None:intergenic 50.0%
TTCTGATTGGACGTGGGAAC+AGG - chr1_2:6769302-6769321 Msa0052500:intron 50.0%
CTTTCAACGAGGTGAGAGTC+AGG - chr1_2:6769469-6769488 Msa0052500:intron 50.0%
GTGAGAGTCAGGCCTCATAT+GGG - chr1_2:6769480-6769499 Msa0052500:intron 50.0%
! CAGCCGCATACCGTTTTATC+TGG - chr1_2:6769559-6769578 Msa0052500:intron 50.0%
GGGTCAAAGGAAGAAGCTAG+AGG - chr1_2:6769622-6769641 Msa0052500:intron 50.0%
CAAGATTGCACACGAAGTCG+TGG + chr1_2:6770544-6770563 None:intergenic 50.0%
CGACTTCGTGTGCAATCTTG+TGG - chr1_2:6770544-6770563 Msa0052500:intron 50.0%
!! CTGGTCTTATGCTGACTTGC+TGG - chr1_2:6770885-6770904 Msa0052500:intron 50.0%
ACGAGGCTTGATTGTTCCCA+TGG - chr1_2:6771219-6771238 Msa0052500:intron 50.0%
GGCTTGATTGTTCCCATGGA+TGG - chr1_2:6771223-6771242 Msa0052500:intron 50.0%
!! TGTTGACTTGCTGCTCGATG+GGG + chr1_2:6771452-6771471 None:intergenic 50.0%
!! GTTGTTGACTTGCTGCTCGA+TGG + chr1_2:6771454-6771473 None:intergenic 50.0%
CAGCCACCATAGAAACTTCG+AGG + chr1_2:6772001-6772020 None:intergenic 50.0%
!! TGACCGCTTGCTTGTTTTCC+AGG - chr1_2:6772521-6772540 Msa0052500:intron 50.0%
CACCACTATTGCAGTGGTAG+CGG - chr1_2:6773055-6773074 Msa0052500:CDS 50.0%
!! TTTTCTGTGATTGGCCGCGT+CGG + chr1_2:6773329-6773348 None:intergenic 50.0%
!! AAAGGTGCGGTGGTGGAAAA+TGG + chr1_2:6773411-6773430 None:intergenic 50.0%
GAAGAAGGGAAGGAAGCAGA+CGG + chr1_2:6773444-6773463 None:intergenic 50.0%
CTGCTTCCTTCCCTTCTTCT+TGG - chr1_2:6773445-6773464 Msa0052500:intron 50.0%
AGTCACAAAACGTGTGGTGG+TGG + chr1_2:6773556-6773575 None:intergenic 50.0%
ACTATGAACGTGTGGTGTGG+TGG + chr1_2:6773686-6773705 None:intergenic 50.0%
AAAAACCCAGGACACGGACA+CGG + chr1_2:6773908-6773927 None:intergenic 50.0%
AAAAACCCAGGACACGGACA+CGG + chr1_2:6773908-6773927 None:intergenic 50.0%
! TGACTTGGAGAAGGAGGAAG+AGG - chr1_2:6774181-6774200 Msa0052500:intron 50.0%
GATATAGGAACGAGTCCGTC+GGG - chr1_2:6774297-6774316 Msa0052500:CDS 50.0%
ATATAGGAACGAGTCCGTCG+GGG - chr1_2:6774298-6774317 Msa0052500:CDS 50.0%
! GGTTTTTCCTTTCACCCCGA+CGG + chr1_2:6774315-6774334 None:intergenic 50.0%
GCTACGGTGATCTACTCGAA+TGG + chr1_2:6775235-6775254 None:intergenic 50.0%
TGAAGAGGTTGTCAGCCAGT+TGG - chr1_2:6776087-6776106 Msa0052500:intron 50.0%
AGAGAGAGCTAAGGAGAAGG+AGG - chr1_2:6776201-6776220 Msa0052500:intron 50.0%
ACTCAGTGGGGTGAATGAGT+TGG - chr1_2:6776876-6776895 Msa0052500:intron 50.0%
CAAGACATGACTGACAGCCA+TGG - chr1_2:6777171-6777190 Msa0052500:intron 50.0%
! AAGGCATCAGAGCAGTATGG+AGG - chr1_2:6777245-6777264 Msa0052500:intron 50.0%
TCAGAGCAGTATGGAGGATG+TGG - chr1_2:6777251-6777270 Msa0052500:intron 50.0%
GAAGTGACCGCAAGAAGTCT+AGG - chr1_2:6777322-6777341 Msa0052500:CDS 50.0%
TGACCGCAAGAAGTCTAGGA+AGG - chr1_2:6777326-6777345 Msa0052500:CDS 50.0%
AAAGACACAAGAGGGACCAC+GGG - chr1_2:6777484-6777503 Msa0052500:intron 50.0%
CTCATTCCATCCAGTTCTCC+TGG + chr1_2:6777517-6777536 None:intergenic 50.0%
CAGGAGAACTGGATGGAATG+AGG - chr1_2:6777515-6777534 Msa0052500:intron 50.0%
CCTTGCTGCGCATGAATGAC+TGG + chr1_2:6764229-6764248 None:intergenic 55.0%
CCAGTCATTCATGCGCAGCA+AGG - chr1_2:6764226-6764245 Msa0052500:three_prime_UTR 55.0%
GTCGGGATGCCTGCTATTCA+AGG - chr1_2:6764316-6764335 Msa0052500:three_prime_UTR 55.0%
!! TGAGGAGGTGCTCCAGAAAC+AGG + chr1_2:6764526-6764545 None:intergenic 55.0%
TGAGGCGGATGCTGGTATTG+GGG + chr1_2:6764691-6764710 None:intergenic 55.0%
! CATGCATTTGAGGCGGATGC+TGG + chr1_2:6764699-6764718 None:intergenic 55.0%
! GGAGGTGCATGCATTTGAGG+CGG + chr1_2:6764706-6764725 None:intergenic 55.0%
! GCAGGAGGTGCATGCATTTG+AGG + chr1_2:6764709-6764728 None:intergenic 55.0%
CAAATGCATGCACCTCCTGC+CGG - chr1_2:6764709-6764728 Msa0052500:intron 55.0%
TGAGGACGACCAAGGTTGTC+CGG + chr1_2:6764731-6764750 None:intergenic 55.0%
!! TGAGGTACTGAGGACGACCA+AGG + chr1_2:6764739-6764758 None:intergenic 55.0%
!! TGCAGCACTCTGAGGTACTG+AGG + chr1_2:6764749-6764768 None:intergenic 55.0%
GTTACAGCTGCAGCACTCTG+AGG + chr1_2:6764757-6764776 None:intergenic 55.0%
CCGGCTGGAGTTCAATCATC+TGG - chr1_2:6764787-6764806 Msa0052500:CDS 55.0%
AGGCATGTTTGGGTCAGAGG+AGG - chr1_2:6765670-6765689 Msa0052500:intron 55.0%
GCGTTGCACAAAGAGAGGGT+CGG - chr1_2:6765768-6765787 Msa0052500:intron 55.0%
ATCTGCTCACTCCCTCACTC+AGG + chr1_2:6765819-6765838 None:intergenic 55.0%
GAGTGAGGGAGTGAGCAGAT+AGG - chr1_2:6765819-6765838 Msa0052500:intron 55.0%
ATGCGATCGCACCTTGTCCT+GGG - chr1_2:6765980-6765999 Msa0052500:intron 55.0%
TTCTCACTGTGCTCAACCCC+AGG + chr1_2:6766000-6766019 None:intergenic 55.0%
TCAGGTATGCAGCTGCAGGT+TGG - chr1_2:6766143-6766162 Msa0052500:intron 55.0%
TTGTGGGTTCTCCCAACTCG+TGG - chr1_2:6766182-6766201 Msa0052500:intron 55.0%
!! TGTTTTGCCCAAGGGGTGTG+AGG - chr1_2:6766326-6766345 Msa0052500:intron 55.0%
GGCAACCCTCACCTTTAAGC+CGG + chr1_2:6766568-6766587 None:intergenic 55.0%
ATCAGCCCTCTGTCACATCC+AGG + chr1_2:6767783-6767802 None:intergenic 55.0%
GAGCTAGCTGCATTAGCTGG+TGG + chr1_2:6768212-6768231 None:intergenic 55.0%
ACTGCACCTACAGCAGTTGC+AGG - chr1_2:6768401-6768420 Msa0052500:intron 55.0%
ACGTGGGAACAGGTAAGACG+AGG - chr1_2:6769312-6769331 Msa0052500:intron 55.0%
GGTGAGAGTCAGGCCTCATA+TGG - chr1_2:6769479-6769498 Msa0052500:intron 55.0%
!! ATTTTGTTGGTGGGGGCAGG+TGG - chr1_2:6770207-6770226 Msa0052500:intron 55.0%
!! TTTTGTTGGTGGGGGCAGGT+GGG - chr1_2:6770208-6770227 Msa0052500:intron 55.0%
GCACACGAAGTCGTGGATCT+TGG + chr1_2:6770537-6770556 None:intergenic 55.0%
TTGTAGTCCAGGTCGCACCT+AGG - chr1_2:6771699-6771718 Msa0052500:intron 55.0%
TGTAGTCCAGGTCGCACCTA+GGG - chr1_2:6771700-6771719 Msa0052500:intron 55.0%
GCAGCCTGGCACCACATATT+GGG - chr1_2:6772100-6772119 Msa0052500:CDS 55.0%
CAGCCTGGCACCACATATTG+GGG - chr1_2:6772101-6772120 Msa0052500:CDS 55.0%
GAGAGAAGATGGAGAGGCAG+AGG - chr1_2:6772854-6772873 Msa0052500:CDS 55.0%
GTCCGCTACCACTGCAATAG+TGG + chr1_2:6773060-6773079 None:intergenic 55.0%
GCGGTATAGCAGCGCTATAG+CGG - chr1_2:6773134-6773153 Msa0052500:intron 55.0%
ACACGGATCCGACATTGCTC+TGG - chr1_2:6773297-6773316 Msa0052500:intron 55.0%
TGCTCTGGTGTAAACCGACG+CGG - chr1_2:6773312-6773331 Msa0052500:intron 55.0%
! TTCCACCACCGCACCTTTTC+CGG - chr1_2:6773413-6773432 Msa0052500:intron 55.0%
CAGAGGAACAGAAACGGCGA+TGG + chr1_2:6773500-6773519 None:intergenic 55.0%
ATATTGCCGTGTCCGTGTCC+TGG - chr1_2:6773899-6773918 Msa0052500:CDS 55.0%
TATTGCCGTGTCCGTGTCCT+GGG - chr1_2:6773900-6773919 Msa0052500:CDS 55.0%
AAAACCCAGGACACGGACAC+GGG + chr1_2:6773907-6773926 None:intergenic 55.0%
TCGAATGGAAAGGGAGGCTG+GGG + chr1_2:6775220-6775239 None:intergenic 55.0%
CTCGAATGGAAAGGGAGGCT+GGG + chr1_2:6775221-6775240 None:intergenic 55.0%
ACTCGAATGGAAAGGGAGGC+TGG + chr1_2:6775222-6775241 None:intergenic 55.0%
GCACGCTACACAACCTGTAC+AGG + chr1_2:6776946-6776965 None:intergenic 55.0%
GTTGTGTAGCGTGCATGACC+AGG - chr1_2:6776952-6776971 Msa0052500:intron 55.0%
AAGACACAAGAGGGACCACG+GGG - chr1_2:6777485-6777504 Msa0052500:intron 55.0%
ACGGTTCCAGGAGAACTGGA+TGG - chr1_2:6777508-6777527 Msa0052500:intron 55.0%
GAGCTTGAAGATGGGGAGCT+TGG - chr1_2:6777537-6777556 Msa0052500:intron 55.0%
GTAACGTCTGTACAGCCGGC+TGG - chr1_2:6764772-6764791 Msa0052500:intron 60.0%
GATGCGATCGCACCTTGTCC+TGG - chr1_2:6765979-6765998 Msa0052500:intron 60.0%
TGCGATCGCACCTTGTCCTG+GGG - chr1_2:6765981-6766000 Msa0052500:intron 60.0%
CTGTGCTCAACCCCAGGACA+AGG + chr1_2:6765994-6766013 None:intergenic 60.0%
CTGCTCACGGGCCAACTGAA+CGG + chr1_2:6768105-6768124 None:intergenic 60.0%
AGCAGAGGAGGCAGCAGCAT+TGG + chr1_2:6768177-6768196 None:intergenic 60.0%
! TTTGTTGGTGGGGGCAGGTG+GGG - chr1_2:6770209-6770228 Msa0052500:intron 60.0%
AAGCTACCCTAGGTGCGACC+TGG + chr1_2:6771709-6771728 None:intergenic 60.0%
GGTCGGGGTGTGAATGTGCA+GGG - chr1_2:6771830-6771849 Msa0052500:intron 60.0%
GAGTGAACATCAGGGCAGCC+TGG - chr1_2:6772086-6772105 Msa0052500:CDS 60.0%
GGCAGCCTGGCACCACATAT+TGG - chr1_2:6772099-6772118 Msa0052500:CDS 60.0%
CCACCCCAATATGTGGTGCC+AGG + chr1_2:6772107-6772126 None:intergenic 60.0%
CCTGGCACCACATATTGGGG+TGG - chr1_2:6772104-6772123 Msa0052500:CDS 60.0%
ATGCTGCTGAGGAACACCGG+CGG - chr1_2:6772281-6772300 Msa0052500:intron 60.0%
TTCCGACACGGACGCGCTTA+CGG - chr1_2:6773205-6773224 Msa0052500:intron 60.0%
CGTACGATTCGCGTCAGACG+CGG - chr1_2:6773232-6773251 Msa0052500:intron 60.0%
GAAGGGAAGGAAGCAGACGG+CGG + chr1_2:6773441-6773460 None:intergenic 60.0%
AACGAGTCCGTCGGGGTGAA+AGG - chr1_2:6774305-6774324 Msa0052500:CDS 60.0%
GAAAGGGAGGCTGGGGTTAG+CGG + chr1_2:6775213-6775232 None:intergenic 60.0%
GGAGCTTGGCGATGATGCAG+AGG - chr1_2:6777551-6777570 Msa0052500:intron 60.0%
CACCTCCTGCCGGACAACCT+TGG - chr1_2:6764719-6764738 Msa0052500:intron 65.0%
GACCAAGGTTGTCCGGCAGG+AGG + chr1_2:6764724-6764743 None:intergenic 65.0%
GACGACCAAGGTTGTCCGGC+AGG + chr1_2:6764727-6764746 None:intergenic 65.0%
AACTTGAGGGAGGGCTCCGG+AGG - chr1_2:6765557-6765576 Msa0052500:CDS 65.0%
ACTTGAGGGAGGGCTCCGGA+GGG - chr1_2:6765558-6765577 Msa0052500:intron 65.0%
CGTTCAGTTGGCCCGTGAGC+AGG - chr1_2:6768103-6768122 Msa0052500:intron 65.0%
GGGTCGGGGTGTGAATGTGC+AGG - chr1_2:6771829-6771848 Msa0052500:intron 65.0%
TGTCGGAACCGCGTCGGACA+CGG + chr1_2:6773193-6773212 None:intergenic 65.0%
TGTCCGACGCGGTTCCGACA+CGG - chr1_2:6773193-6773212 Msa0052500:intron 65.0%
TGCCGTAAGCGCGTCCGTGT+CGG + chr1_2:6773210-6773229 None:intergenic 65.0%
CACGACACGGACACGGGACA+CGG + chr1_2:6773940-6773959 None:intergenic 65.0%
ACGGGACACGACACGGACAC+GGG + chr1_2:6773946-6773965 None:intergenic 65.0%
CACGGGACACGACACGGACA+CGG + chr1_2:6773947-6773966 None:intergenic 65.0%
CACGGACACGGGACACGACA+CGG + chr1_2:6773953-6773972 None:intergenic 65.0%
GTGTCCCGTGTCCGTGTCCT+GGG - chr1_2:6773957-6773976 Msa0052500:CDS 65.0%
CACAAGAGGGACCACGGGGA+CGG - chr1_2:6777489-6777508 Msa0052500:intron 65.0%
TTCTCCTGGAACCGTCCCCG+TGG + chr1_2:6777503-6777522 None:intergenic 65.0%
GGGGACGGTTCCAGGAGAAC+TGG - chr1_2:6777504-6777523 Msa0052500:intron 65.0%
GAGATCCGCCGTGTCCGACG+CGG - chr1_2:6773182-6773201 Msa0052500:intron 70.0%
CGTCCGTGTCGGAACCGCGT+CGG + chr1_2:6773199-6773218 None:intergenic 70.0%
! CGCCGGAAAAGGTGCGGTGG+TGG + chr1_2:6773418-6773437 None:intergenic 70.0%
AAGGAAGCAGACGGCGGCGC+CGG + chr1_2:6773435-6773454 None:intergenic 70.0%
CGTGTCCCGTGTCCGTGTCC+TGG - chr1_2:6773956-6773975 Msa0052500:CDS 70.0%
CGGAACCGCGTCGGACACGG+CGG + chr1_2:6773190-6773209 None:intergenic 75.0%
! CGGCGCCGGAAAAGGTGCGG+TGG + chr1_2:6773421-6773440 None:intergenic 75.0%
! CGGCGGCGCCGGAAAAGGTG+CGG + chr1_2:6773424-6773443 None:intergenic 75.0%
! GCAGACGGCGGCGCCGGAAA+AGG + chr1_2:6773429-6773448 None:intergenic 75.0%
GGGACCACGGGGACGGTTCC+AGG - chr1_2:6777496-6777515 Msa0052500:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 6764214 6777915 6764214 ID=Msa0052500;Name=Msa0052500
chr1_2 mRNA 6764214 6777915 6764214 ID=Msa0052500-mRNA-1;Parent=Msa0052500;Name=Msa0052500-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.95|0.95|1|1|1|24|337|938
chr1_2 exon 6764214 6764685 6764214 ID=Msa0052500-mRNA-1:exon:2266;Parent=Msa0052500-mRNA-1
chr1_2 exon 6764782 6765087 6764782 ID=Msa0052500-mRNA-1:exon:2265;Parent=Msa0052500-mRNA-1
chr1_2 exon 6765474 6765576 6765474 ID=Msa0052500-mRNA-1:exon:2264;Parent=Msa0052500-mRNA-1
chr1_2 exon 6765685 6765749 6765685 ID=Msa0052500-mRNA-1:exon:2263;Parent=Msa0052500-mRNA-1
chr1_2 exon 6765841 6765948 6765841 ID=Msa0052500-mRNA-1:exon:2262;Parent=Msa0052500-mRNA-1
chr1_2 exon 6766793 6766885 6766793 ID=Msa0052500-mRNA-1:exon:2261;Parent=Msa0052500-mRNA-1
chr1_2 exon 6766979 6767026 6766979 ID=Msa0052500-mRNA-1:exon:2260;Parent=Msa0052500-mRNA-1
chr1_2 exon 6767511 6767609 6767511 ID=Msa0052500-mRNA-1:exon:2259;Parent=Msa0052500-mRNA-1
chr1_2 exon 6767709 6767825 6767709 ID=Msa0052500-mRNA-1:exon:2258;Parent=Msa0052500-mRNA-1
chr1_2 exon 6769778 6769858 6769778 ID=Msa0052500-mRNA-1:exon:2257;Parent=Msa0052500-mRNA-1
chr1_2 exon 6772083 6772188 6772083 ID=Msa0052500-mRNA-1:exon:2256;Parent=Msa0052500-mRNA-1
chr1_2 exon 6772287 6772321 6772287 ID=Msa0052500-mRNA-1:exon:2255;Parent=Msa0052500-mRNA-1
chr1_2 exon 6772426 6772512 6772426 ID=Msa0052500-mRNA-1:exon:2254;Parent=Msa0052500-mRNA-1
chr1_2 exon 6772650 6772727 6772650 ID=Msa0052500-mRNA-1:exon:2253;Parent=Msa0052500-mRNA-1
chr1_2 exon 6772806 6772874 6772806 ID=Msa0052500-mRNA-1:exon:2252;Parent=Msa0052500-mRNA-1
chr1_2 exon 6772990 6773088 6772990 ID=Msa0052500-mRNA-1:exon:2251;Parent=Msa0052500-mRNA-1
chr1_2 exon 6773484 6773547 6773484 ID=Msa0052500-mRNA-1:exon:2250;Parent=Msa0052500-mRNA-1
chr1_2 exon 6773658 6774019 6773658 ID=Msa0052500-mRNA-1:exon:2249;Parent=Msa0052500-mRNA-1
chr1_2 exon 6774104 6774161 6774104 ID=Msa0052500-mRNA-1:exon:2248;Parent=Msa0052500-mRNA-1
chr1_2 exon 6774283 6774335 6774283 ID=Msa0052500-mRNA-1:exon:2247;Parent=Msa0052500-mRNA-1
chr1_2 exon 6775085 6775154 6775085 ID=Msa0052500-mRNA-1:exon:2246;Parent=Msa0052500-mRNA-1
chr1_2 exon 6775313 6775380 6775313 ID=Msa0052500-mRNA-1:exon:2245;Parent=Msa0052500-mRNA-1
chr1_2 exon 6777301 6777468 6777301 ID=Msa0052500-mRNA-1:exon:2244;Parent=Msa0052500-mRNA-1
chr1_2 exon 6777571 6777915 6777571 ID=Msa0052500-mRNA-1:exon:2243;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6777571 6777915 6777571 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6777301 6777468 6777301 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6775313 6775380 6775313 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6775085 6775154 6775085 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6774283 6774335 6774283 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6774104 6774161 6774104 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6773658 6774019 6773658 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6773484 6773547 6773484 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6772990 6773088 6772990 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6772806 6772874 6772806 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6772650 6772727 6772650 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6772426 6772512 6772426 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6772287 6772321 6772287 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6772083 6772188 6772083 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6769778 6769858 6769778 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6767709 6767825 6767709 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6767511 6767609 6767511 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6766979 6767026 6766979 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6766793 6766885 6766793 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6765841 6765948 6765841 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6765685 6765749 6765685 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6765474 6765576 6765474 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6764782 6765087 6764782 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 CDS 6764551 6764685 6764551 ID=Msa0052500-mRNA-1:cds;Parent=Msa0052500-mRNA-1
chr1_2 three_prime_UTR 6764214 6764550 6764214 ID=Msa0052500-mRNA-1:three_prime_utr;Parent=Msa0052500-mRNA-1
Gene Sequence

>Msa0052500

CTGCAGTTTCGGCCAGTCATTCATGCGCAGCAAGGGCCACCATTTGTTCCCATGACTTCACAACAATTCGGACATGCAGGGCATGCCGTTCCTTCATCTAATGTCGGGATGCCTGCTATTCAAGGTCAGCAATTGCAGTATTCTCAACAAATGCAACAGTTGGCTCCAAGACAAATTCAGCCCGGTCATCCTGTTTCATCATCACAGGGTATACCTATGCCATATATTCAAACAAACAGGCCACTGACATCTGTTCCACAACATGCACAGCAAGCTGTTCCTCACATAAACAATCATATGCATGGCTTGCCTGTTTCTGGAGCACCTCCTCAATCTCTATACACTTTCACACCATCTTATGGTCAGGCATTGCCCCAATACCAGCATCCGCCTCAAATGCATGCACCTCCTGCCGGACAACCTTGGTCGTCCTCAGTACCTCAGAGTGCTGCAGCTGTAACGTCTGTACAGCCGGCTGGAGTTCAATCATCTGGTACTGCATCAAATGATGCTGCAACTAATACCACTAGCAACAACTCTGCATCTGATTGGCAAGAGCATACTGCTGGTGATGGGAGAAGATATTACTACAACAAGAGTACAAGGCAATCTAGTTGGGAAAAACCTTTGGAGTTGATGTCACCTCTTGAGAGGGCTGATGCATCAACTGTTTGGAAAGAGTTCACTTCTTCAGAGGGAAGAAAGTATTATTACAACAAGGTTACTCAGCAATCAGTATGGACAATACCAGAAGAACTCAAGTTGGCCCGTGAGCAGGCACATAAAACTATTAGCCAGGGAATGGTGTCAGAAACAAGTGATACATCCAATGCTGCTGCCTCCTCTGCTGCAACATCAACTCCACCAGCTAATGCAGCTAGCTCCAACACTTTGAGACCTAATGGTCTTGCTTCAAGCCCATCTTCTGTTACACCAGTTGTTGCCACTGATAATCAACGACCAGTTTCTGGATTATCAGTGGTCTCTGTTTCCCATTCTGTCGTTACTTCAAGCACCATAGGAGTCGAACCAAGCACTGTTGTAACTGTGAGCACTGCACCTACAGCAGTTGCAGGAAGCTTAGGAGTAGTAGCCAACTCACTTGATTCAAAAATTCCATCCATTGTTGAAAATCAAGTAACTCACGATTCTACTTCTGTCAATGGAGCACCTCTTCAAGATATGGAGGAAGCCAAAAAAGGAGTTCCTGTGGTTGGACAAACTAATGTGACTCCTTCAGAGGAGAAAACCAATGATGGTGAAACTTTGGTATATGCAAATAAGCTGGAAGCAAAAAATGCATTTAAAGCGCTTTTGGAATCTGTGAATGTTCATTCTGATTGGACGTGGGAACAGGCAATGAGAGAAATCATCAATGATAAAAGATATAATGCCCTGAAAACACTTGGTGAGCGAAAACAAGCTTTCAACGAGTATTTGGGTCAAAGGAAGAAGCTAGAGGCTGAAGAAAGGCGTATAAAGCAGAAAAAAGCCCGCGAAGAATTCACAAAGATGTTAGAAGAGTGCAAGGAGCTAACATCATCCACAAGATGGAGCAAAGCTATAAGTATGCTTGAAAATGATGAACGATTCAATGCTGTTGAAAGAGTAAGAGATCGGGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGAAAGGAAAAGGAAAATGCTGCTGAGGAACACCGGCGGAATTTAGCAGAATATAGGAAATTTCTGGAGTCCTGTGATTTTGTGAAGGAACGAGTCCGTCGGGGTGAAAGGAAAAACCGTGATGCATTTCGCAAGTTGCTAGAAGAACATATTGCTGATGGAGTTCTTACTGCTAAAACACAGTGGCGAGATTATTGCTTGAAGGTGAAAGAGTTGCCTCAATATCAAGCTGTTGCATCAAATACATCCGGTTCTACTCCAAAAGATTTATTTGAGGATGTCTTTGAAAATCTTGAAAAGCAGTATCATGAAGACAAGACACTCATAAAAGATATACTTAAGTCGGGCAAGATCACCGTAGCGACTACATCAGTATTTGAGGACTTCAAGTCTGCTGTATCAGAAGAAGCTACTTGCAAAACAATATCGGAGATCAATTTGAAGCTTTTATTTGAAGAGTTATTAGAGAGAGCTAAGGAGAAGGAGGAGAAAGAAGCTAAGAAACGCCAACGCCTTGCTGATGACTTTACTAACTTATTATATACACTCAAGGATATTATTACTTCTTCAACATGGGAGGAATGCAAGGCACTTTTTGAGGACACACAAGAATACATTTCAATTGGAGATGAAAGCTATAGTAAAGAAATTTTTGAGGAATACATTACATACTTGAAGGAAAAAGCTAAAGAGAAGGAACGTAAGCGTGAAGAAGAAAAGGCCAAAAAGGAGAAAGAAAGAGAAGAGAAAGAAAAACGTAAAGAGAAGGAGAAAAAAGAGAAGGAAAGAGAACGTGAGAAAGAAAAATCAAAAGAACGACATAAGAAAGATGAATCAGATAGTGATAATCAAGACATGACTGACAGCCATGGTTATAGAGAGGAGAAGAAAAAAGAAAAGGATAAAGAGAGAAAACATCGAAGAAGGCATCAGAGCAGTATGGAGGATGTGGATTCTGAAAAAGATGAGAAGGAAGAGTCTAGAAAATCGCGAAGACATGGAAGTGACCGCAAGAAGTCTAGGAAGCATGCAAACTCTCCTGAGTCAGACAATGAAGGTAGGCATAAAAGACACAAGAGGGACCACGGGGACGGTTCCAGGAGAACTGGATGGAATGAGGAGCTTGAAGATGGGGAGCTTGGCGATGATGCAGAGGTTTAG
Protein sequence

>Msa0052500

LQFRPVIHAQQGPPFVPMTSQQFGHAGHAVPSSNVGMPAIQGQQLQYSQQMQQLAPRQIQPGHPVSSSQGIPMPYIQTNRPLTSVPQHAQQAVPHINNHMHGLPVSGAPPQSLYTFTPSYGQALPQYQHPPQMHAPPAGQPWSSSVPQSAAAVTSVQPAGVQSSGTASNDAATNTTSNNSASDWQEHTAGDGRRYYYNKSTRQSSWEKPLELMSPLERADASTVWKEFTSSEGRKYYYNKVTQQSVWTIPEELKLAREQAHKTISQGMVSETSDTSNAAASSAATSTPPANAASSNTLRPNGLASSPSSVTPVVATDNQRPVSGLSVVSVSHSVVTSSTIGVEPSTVVTVSTAPTAVAGSLGVVANSLDSKIPSIVENQVTHDSTSVNGAPLQDMEEAKKGVPVVGQTNVTPSEEKTNDGETLVYANKLEAKNAFKALLESVNVHSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRIKQKKAREEFTKMLEECKELTSSTRWSKAISMLENDERFNAVERVRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLESCDFVKERVRRGERKNRDAFRKLLEEHIADGVLTAKTQWRDYCLKVKELPQYQAVASNTSGSTPKDLFEDVFENLEKQYHEDKTLIKDILKSGKITVATTSVFEDFKSAVSEEATCKTISEINLKLLFEELLERAKEKEEKEAKKRQRLADDFTNLLYTLKDIITSSTWEECKALFEDTQEYISIGDESYSKEIFEEYITYLKEKAKEKERKREEEKAKKEKEREEKEKRKEKEKKEKEREREKEKSKERHKKDESDSDNQDMTDSHGYREEKKKEKDKERKHRRRHQSSMEDVDSEKDEKEESRKSRRHGSDRKKSRKHANSPESDNEGRHKRHKRDHGDGSRRTGWNEELEDGELGDDAEV*