AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0097910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0097910 MtrunA17_Chr1g0152211 86.072 998 31 7 1 890 28 1025 0.0 1486
Msa0097910 MtrunA17_Chr1g0206921 47.955 978 367 27 17 890 64 1003 0.0 646
Msa0097910 MtrunA17_Chr4g0037851 25.047 535 280 19 61 527 191 672 3.37e-18 89.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0097910 AT1G44910.1 51.177 977 338 21 3 888 30 958 0.0 739
Msa0097910 AT1G44910.2 50.694 937 327 19 3 848 30 922 0.0 694
Msa0097910 AT3G19670.3 38.345 991 457 26 1 887 50 990 2.52e-169 518
Msa0097910 AT3G19670.1 38.345 991 457 26 1 887 50 990 2.52e-169 518
Msa0097910 AT3G19670.2 38.345 991 457 26 1 887 50 990 2.52e-169 518
Msa0097910 AT3G19670.4 38.345 991 457 26 1 887 31 971 6.44e-169 516

Find 225 sgRNAs with CRISPR-Local

Find 994 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCATGGCTTGCCTGTTTC+TGG 0.038438 1_3:-3759588 Msa0097910:CDS
GATAATCAACGACCAGTTTC+TGG 0.168664 1_3:-3755799 Msa0097910:CDS
AGCAGAATATAGGAAATTTC+TGG 0.198110 1_3:-3751789 Msa0097910:CDS
ATGTACACGCCTGTGAATTT+AGG 0.202335 1_3:-3746409 Msa0097910:three_prime_UTR
GGCCTGTTTGTTTGAATATA+TGG 0.213492 1_3:+3759666 None:intergenic
AAATGCATTTAAAGCGCTTT+TGG 0.225366 1_3:-3754832 Msa0097910:CDS
AGAACTTCACCTGCATCTTT+TGG 0.233965 1_3:-3746473 Msa0097910:three_prime_UTR
CCATATACCTTGAGTTCTTC+TGG 0.251280 1_3:+3756084 None:intergenic
ACATCCTCAAATAAATCTTT+TGG 0.289484 1_3:+3749514 None:intergenic
GGGACCACGGGGACGGTTCC+AGG 0.299819 1_3:-3746592 Msa0097910:CDS
TTTGAGGCGGATGCTGGTAT+TGG 0.308848 1_3:+3759408 None:intergenic
TTTATCTAATCATTGCAAAA+AGG 0.318893 1_3:+3746495 None:intergenic
TTGAGGCGGATGCTGGTATT+GGG 0.320664 1_3:+3759409 None:intergenic
TTTCAGTTCACACCATCTTA+TGG 0.321948 1_3:-3759443 Msa0097910:intron
TTATCATCCATTCAGTATTT+GGG 0.338884 1_3:-3754493 Msa0097910:intron
TACCAAAGTTTCACCATCAT+TGG 0.343297 1_3:+3754993 None:intergenic
CGTTCAGTTGGCCCGTGAGC+AGG 0.344750 1_3:-3755992 Msa0097910:intron
CTCATTCCATCCAGTTCTCC+TGG 0.384057 1_3:+3746574 None:intergenic
TTCTGATTGGACGTGGGAAC+AGG 0.389042 1_3:-3754793 Msa0097910:intron
CTGTGAATGTTCATTCTGAT+TGG 0.390623 1_3:-3754806 Msa0097910:CDS
CAATGAAATTTGAAGATTTG+TGG 0.400009 1_3:+3746304 None:intergenic
ACAGCAGTTGCAGGAAGCTT+AGG 0.403204 1_3:-3755685 Msa0097910:CDS
TGAGGAGGTGCTCCAGAAAC+AGG 0.404094 1_3:+3759576 None:intergenic
TGTTCAGAGTTGTTGTTTGC+GGG 0.405075 1_3:+3760683 None:intergenic
GGGCTGATGCATCAACTGTT+TGG 0.410617 1_3:-3756300 Msa0097910:CDS
ATATAATGTTCTGGCAAATA+CGG 0.412466 1_3:-3746245 Msa0097910:three_prime_UTR
GATATAGGAACGAGTCCGTC+GGG 0.415488 1_3:-3749791 Msa0097910:intron
GGGCTTGAAGCAAGACCATT+AGG 0.420839 1_3:+3755850 None:intergenic
TGCCATATATTCAAACAAAC+AGG 0.421533 1_3:-3759668 Msa0097910:CDS
ACCACACGTCAAGGGATTCC+AGG 0.423906 1_3:-3760575 Msa0097910:five_prime_UTR
ACCACTGATAATCCAGAAAC+TGG 0.425854 1_3:+3755787 None:intergenic
AGAGTACAAGGCAATCTAGT+TGG 0.428021 1_3:-3757106 Msa0097910:CDS
AATATTTGCATATAATGTTC+TGG 0.432563 1_3:-3746254 Msa0097910:three_prime_UTR
AAGAAGGCATCAGAGCAGTA+TGG 0.433242 1_3:-3746846 Msa0097910:CDS
GGAATGAGGAGCTTGAAGAT+GGG 0.437118 1_3:-3746559 Msa0097910:CDS
ACTTCCTTATATAGTTCAAT+TGG 0.438478 1_3:-3747549 Msa0097910:intron
ACTGCACCTACAGCAGTTGC+AGG 0.439764 1_3:-3755694 Msa0097910:CDS
TGGAGCACCTCTTCAAGATA+TGG 0.442331 1_3:-3755474 Msa0097910:CDS
CTGTTCAGAGTTGTTGTTTG+CGG 0.446010 1_3:+3760682 None:intergenic
AGGTTACTCAGCAATCAGTA+TGG 0.449369 1_3:-3756113 Msa0097910:CDS
AACCAATGATGGTGAAACTT+TGG 0.452007 1_3:-3754995 Msa0097910:CDS
TGGAATGAGGAGCTTGAAGA+TGG 0.452090 1_3:-3746560 Msa0097910:CDS
GATGCAACAGCTTGATATTG+AGG 0.452557 1_3:+3749556 None:intergenic
TCTTCTCCTCTCTATAACCA+TGG 0.455879 1_3:+3746900 None:intergenic
GCAGGAGGTGCATGCATTTG+AGG 0.456721 1_3:+3759392 None:intergenic
TACTCCAAAAGATTTATTTG+AGG 0.462163 1_3:-3749518 Msa0097910:CDS
GTCGGGATGCCTGCTATTCA+AGG 0.463184 1_3:-3759783 Msa0097910:CDS
CACGATTCTACTTCTGTCAA+TGG 0.463402 1_3:-3755494 Msa0097910:CDS
GAGCTTGAAGATGGGGAGCT+TGG 0.463687 1_3:-3746551 Msa0097910:CDS
ATGAAAAGTAGAAGGATTGT+TGG 0.464263 1_3:+3746430 None:intergenic
GACGACCAAGGTTGTCCGGC+AGG 0.464632 1_3:+3759374 None:intergenic
TCCAACACTTTGAGACCTAA+TGG 0.466267 1_3:-3755865 Msa0097910:CDS
CCCATGACTTCACAACAATT+CGG 0.467987 1_3:-3759837 Msa0097910:CDS
GAGTACAAGGCAATCTAGTT+GGG 0.468679 1_3:-3757105 Msa0097910:CDS
TGATTATCAGTGGCAACAAC+TGG 0.471567 1_3:+3755814 None:intergenic
AACGAGTCCGTCGGGGTGAA+AGG 0.472697 1_3:-3749783 Msa0097910:CDS
TGAGGACGACCAAGGTTGTC+CGG 0.473310 1_3:+3759370 None:intergenic
CTTTGAAAATCTTGAAAAGC+AGG 0.473646 1_3:-3749491 Msa0097910:intron
GGCACATAAAACTATTAGCC+AGG 0.474323 1_3:-3755971 Msa0097910:CDS
TTGTTTCTGACACCATTCCC+TGG 0.476710 1_3:+3755953 None:intergenic
GGGGACGGTTCCAGGAGAAC+TGG 0.476948 1_3:-3746584 Msa0097910:CDS
TTTGTGGCCTACATTACTCT+TGG 0.477285 1_3:+3746320 None:intergenic
ACAACTGGTGTAACAGAAGA+TGG 0.477825 1_3:+3755829 None:intergenic
AGCAGAGGAGGCAGCAGCAT+TGG 0.478603 1_3:+3755921 None:intergenic
CCGGCTGGAGTTCAATCATC+TGG 0.478668 1_3:-3759311 Msa0097910:CDS
GCAACAGCTCTGCATCTGAT+TGG 0.486873 1_3:-3757330 Msa0097910:CDS
GTTCACACCATCTTATGGTC+AGG 0.487720 1_3:-3759438 Msa0097910:CDS
CCATTCAGTATTTGGGTCAA+AGG 0.489226 1_3:-3754486 Msa0097910:intron
GGAATACATTACATACTTGA+AGG 0.490150 1_3:-3747496 Msa0097910:CDS
AAGCTTCCTGCAACTGCTGT+AGG 0.493376 1_3:+3755688 None:intergenic
CACCTCCTGCCGGACAACCT+TGG 0.495114 1_3:-3759379 Msa0097910:CDS
GCGTGTACATGAAAAGTAGA+AGG 0.495572 1_3:+3746422 None:intergenic
GTGGCGAGATTATTGCTTGA+AGG 0.495782 1_3:-3749689 Msa0097910:intron
CATCTTTGTGAATTCTTCGC+GGG 0.495972 1_3:+3754420 None:intergenic
GCAGGACTATATTCGTGACT+TGG 0.496186 1_3:-3749922 Msa0097910:intron
TCACAACAATTCGGACATGC+AGG 0.496394 1_3:-3759828 Msa0097910:CDS
TGACCGGGCTGAATTTGTCT+TGG 0.497049 1_3:+3759720 None:intergenic
TCATCCTGTTTCATCATCAC+AGG 0.497226 1_3:-3759700 Msa0097910:CDS
CCTTGCTGAGCATGAATGAC+TGG 0.498511 1_3:+3759873 None:intergenic
ATTAGAGAGAGCTAAGGAGA+AGG 0.502167 1_3:-3747890 Msa0097910:CDS
CCGTTCCTTCATCTAATGTC+GGG 0.507422 1_3:-3759800 Msa0097910:CDS
GCCGTTCCTTCATCTAATGT+CGG 0.508127 1_3:-3759801 Msa0097910:CDS
TTGGAGCTAGCTGCATTAGC+TGG 0.508131 1_3:+3755883 None:intergenic
AGAGAGAGCTAAGGAGAAGG+AGG 0.508555 1_3:-3747887 Msa0097910:CDS
TATTATTACTTCTTCAACAT+GGG 0.510330 1_3:-3747706 Msa0097910:CDS
AATTGCTGACCTTGAATAGC+AGG 0.511307 1_3:+3759774 None:intergenic
AGAGTTATTAGAGAGAGCTA+AGG 0.512572 1_3:-3747896 Msa0097910:CDS
CATGCATTTGAGGCGGATGC+TGG 0.512699 1_3:+3759402 None:intergenic
GGCGGAATTTAGCAGAATAT+AGG 0.514204 1_3:-3751799 Msa0097910:CDS
TTTGTTTGAATATATGGCAT+AGG 0.515540 1_3:+3759672 None:intergenic
AGTGCTTGGTTCGACTCCTA+TGG 0.517790 1_3:+3755732 None:intergenic
TCAGAGCAGTATGGAGGATG+TGG 0.518136 1_3:-3746837 Msa0097910:CDS
CTTTATACCAAGAGTAATGT+AGG 0.518872 1_3:-3746327 Msa0097910:three_prime_UTR
CAAATGCATGCACCTCCTGC+CGG 0.518916 1_3:-3759389 Msa0097910:CDS
CATGGTGGAACTTGAGAGAA+AGG 0.520392 1_3:-3754070 Msa0097910:intron
AAAGACACAAGAGGGACCAC+GGG 0.521871 1_3:-3746604 Msa0097910:CDS
TTACACAATCCTAAATTCAC+AGG 0.523335 1_3:+3746400 None:intergenic
CTAGAAGAACATATTGCTGA+TGG 0.524243 1_3:-3749733 Msa0097910:CDS
TGCTTGAAGTAACGACAGAA+TGG 0.525508 1_3:+3755755 None:intergenic
CTCACAGTTACAACAGTGCT+TGG 0.526579 1_3:+3755718 None:intergenic
ACATCTTTGTGAATTCTTCG+CGG 0.526596 1_3:+3754419 None:intergenic
GTAACGTCTGTACAGCCGGC+TGG 0.529488 1_3:-3759326 Msa0097910:CDS
CAAGAGCATACTGCTGGTGA+TGG 0.531052 1_3:-3757307 Msa0097910:CDS
TTTGGTATATGCAAATAAGC+TGG 0.531455 1_3:-3754977 Msa0097910:intron
AAGAGAGAAAACATCGAAGA+AGG 0.532161 1_3:-3746862 Msa0097910:CDS
CCCTTGACGTGTGGTATGGT+CGG 0.533216 1_3:+3760583 None:intergenic
ACCATTAGGTCTCAAAGTGT+TGG 0.536875 1_3:+3755864 None:intergenic
TTCTCAACAAATGCAACAGT+TGG 0.538488 1_3:-3759745 Msa0097910:CDS
CTGTTGAAAGAGTAAGAGAT+CGG 0.540036 1_3:-3754113 Msa0097910:CDS
AGATTTATTTGAAAGCTACA+TGG 0.541453 1_3:-3754088 Msa0097910:CDS
CGTACAGTGTATAGAGATTG+AGG 0.543077 1_3:+3759558 None:intergenic
TGATGATGAAACAGGATGAC+CGG 0.543456 1_3:+3759704 None:intergenic
AGCTGTAACGTCTGTACAGC+CGG 0.544674 1_3:-3759330 Msa0097910:CDS
AGAAGCTAGAGGCTGAAGAA+AGG 0.544989 1_3:-3754462 Msa0097910:CDS
ACGTAAGCGTGAAGAAGAAA+AGG 0.545043 1_3:-3747454 Msa0097910:intron
TGATATAGGAACGAGTCCGT+CGG 0.545937 1_3:-3749792 Msa0097910:intron
TGACTTGGAGAAGGAGGAAG+AGG 0.546026 1_3:-3749907 Msa0097910:CDS
CAATATTCTCCAAAAGATGC+AGG 0.547173 1_3:+3746464 None:intergenic
ATACTGCTGGTGATGGGAGA+AGG 0.548219 1_3:-3757300 Msa0097910:intron
GCTGTTGCATCAAATACATC+CGG 0.551042 1_3:-3749544 Msa0097910:CDS
GAAGTGACCGCAAGAAGTCT+AGG 0.551692 1_3:-3746766 Msa0097910:CDS
GGAGTTGATGTCACCTCTTG+AGG 0.553125 1_3:-3757072 Msa0097910:intron
ATACCTTCCTAGACTTCTTG+CGG 0.553463 1_3:+3746759 None:intergenic
GAAAGAGTTCACTTCTTCAG+AGG 0.554876 1_3:-3756278 Msa0097910:CDS
TTCAACATGGGAGGAATGCA+AGG 0.556166 1_3:-3747694 Msa0097910:CDS
TCTAGAAAATCGCGAAGACA+TGG 0.556892 1_3:-3746788 Msa0097910:CDS
ATACCCTGTGATGATGAAAC+AGG 0.557450 1_3:+3759696 None:intergenic
CAGGAGAACTGGATGGAATG+AGG 0.557842 1_3:-3746573 Msa0097910:CDS
TCCGAATTGTTGTGAAGTCA+TGG 0.558122 1_3:+3759836 None:intergenic
GAGCTAGCTGCATTAGCTGG+TGG 0.559039 1_3:+3755886 None:intergenic
GCTTGAAGTAACGACAGAAT+GGG 0.559357 1_3:+3755756 None:intergenic
TAAAGTCATCAGCAAGGCGT+TGG 0.560032 1_3:+3747845 None:intergenic
AGTTGATGTTGCAGCAGAGG+AGG 0.561689 1_3:+3755909 None:intergenic
TCTCCTGAGTCAGACAATGA+AGG 0.561975 1_3:-3746635 Msa0097910:CDS
AAAAGACACAAGAGGGACCA+CGG 0.563924 1_3:-3746605 Msa0097910:CDS
TCAGAGGAGAAAACCAATGA+TGG 0.566057 1_3:-3755006 Msa0097910:CDS
TAAAACTATTAGCCAGGGAA+TGG 0.567415 1_3:-3755965 Msa0097910:CDS
CTACCTTCATTGTCTGACTC+AGG 0.567758 1_3:+3746632 None:intergenic
GAATCCCTTGACGTGTGGTA+TGG 0.568039 1_3:+3760579 None:intergenic
TATATTCTGCTAAATTCCGC+CGG 0.569486 1_3:+3751801 None:intergenic
AGCTAACATCATCCACAAGA+TGG 0.570809 1_3:-3754277 Msa0097910:CDS
GTCGTTACTTCAAGCACCAT+AGG 0.571185 1_3:-3755748 Msa0097910:CDS
CTATATTCGTGACTTGGAGA+AGG 0.573107 1_3:-3749916 Msa0097910:CDS
TCCGACCATACCACACGTCA+AGG 0.576387 1_3:-3760584 Msa0097910:five_prime_UTR
TGTGAAGTCATGGGAACAAA+TGG 0.576862 1_3:+3759846 None:intergenic
CACATAAACAATCATATGCA+TGG 0.577352 1_3:-3759603 Msa0097910:CDS
CCAGTCATTCATGCTCAGCA+AGG 0.579722 1_3:-3759873 Msa0097910:five_prime_UTR
TATTACTTCTTCAACATGGG+AGG 0.581858 1_3:-3747703 Msa0097910:CDS
AAAGAGTTCACTTCTTCAGA+GGG 0.582420 1_3:-3756277 Msa0097910:CDS
CAGTCATTCATGCTCAGCAA+GGG 0.582640 1_3:-3759872 Msa0097910:five_prime_UTR
GGAAAAGGAAAATGCTGCTG+AGG 0.585150 1_3:-3751828 Msa0097910:CDS
ATGTACCTTCACAAAATCAC+AGG 0.586297 1_3:+3751763 None:intergenic
CCAGATGATTGAACTCCAGC+CGG 0.587420 1_3:+3759311 None:intergenic
TATAATGCCCTGAAAACACT+TGG 0.587574 1_3:-3754663 Msa0097910:CDS
CTGCAGGTATTATTACAACA+AGG 0.589073 1_3:-3756133 Msa0097910:intron
TGTTGAAAGAGTAAGAGATC+GGG 0.589167 1_3:-3754112 Msa0097910:CDS
GAATGAGGAGCTTGAAGATG+GGG 0.589298 1_3:-3746558 Msa0097910:CDS
ACATTAGTTTGTCCAACCAC+AGG 0.594069 1_3:+3755036 None:intergenic
GATTGGCAAGAGCATACTGC+TGG 0.595223 1_3:-3757313 Msa0097910:CDS
CCACACGTCAAGGGATTCCA+GGG 0.596561 1_3:-3760574 Msa0097910:intron
GACAATACCAGAAGAACTCA+AGG 0.597189 1_3:-3756091 Msa0097910:intron
ATGTTCATTCTGATTGGACG+TGG 0.597884 1_3:-3754800 Msa0097910:CDS
CACAAGAGGGACCACGGGGA+CGG 0.599081 1_3:-3746599 Msa0097910:CDS
AATACCTCCATATCTTGAAG+AGG 0.599572 1_3:+3755467 None:intergenic
AAAATGCTGCTGAGGAACAC+CGG 0.602673 1_3:-3751820 Msa0097910:CDS
CAACTGGTGTAACAGAAGAT+GGG 0.603013 1_3:+3755830 None:intergenic
GGCATCCCGACATTAGATGA+AGG 0.603036 1_3:+3759795 None:intergenic
TAACTTATTATATACACTCA+AGG 0.603685 1_3:-3747821 Msa0097910:intron
ATTACTACAACAAGAGTACA+AGG 0.603856 1_3:-3757118 Msa0097910:CDS
CCCGACATTAGATGAAGGAA+CGG 0.604025 1_3:+3759800 None:intergenic
AACTAATGTGACTCCTTCAG+AGG 0.605322 1_3:-3755022 Msa0097910:CDS
CCCTGGAATCCCTTGACGTG+TGG 0.606033 1_3:+3760574 None:intergenic
TGGAGTTGATGTTGCAGCAG+AGG 0.607065 1_3:+3755906 None:intergenic
ACAGCTTGCTGTGCATGTTG+TGG 0.607782 1_3:+3759630 None:intergenic
AAAATTATACCTCCATCTTG+TGG 0.609019 1_3:+3754265 None:intergenic
ACGGTTCCAGGAGAACTGGA+TGG 0.609038 1_3:-3746580 Msa0097910:CDS
TGAGGCGGATGCTGGTATTG+GGG 0.609946 1_3:+3759410 None:intergenic
AACTGGTCGTTGATTATCAG+TGG 0.611617 1_3:+3755804 None:intergenic
ATATTATTACTTCTTCAACA+TGG 0.611639 1_3:-3747707 Msa0097910:CDS
TTTATTTGAAAGCTACATGG+TGG 0.617248 1_3:-3754085 Msa0097910:CDS
ACCAGTTTCTGGATTATCAG+TGG 0.617569 1_3:-3755788 Msa0097910:CDS
TGCATATGATTGTTTATGTG+AGG 0.618480 1_3:+3759606 None:intergenic
AGATGCAGAGCTGTTGCTAG+TGG 0.621867 1_3:+3757336 None:intergenic
CACAACAATTCGGACATGCA+GGG 0.622894 1_3:-3759827 Msa0097910:CDS
AAGAGCATACTGCTGGTGAT+GGG 0.629015 1_3:-3757306 Msa0097910:CDS
GACCAAGGTTGTCCGGCAGG+AGG 0.629097 1_3:+3759377 None:intergenic
CTGAGTCAGACAATGAAGGT+AGG 0.631523 1_3:-3746631 Msa0097910:CDS
GGCAATGCCTGACCATAAGA+TGG 0.632811 1_3:+3759431 None:intergenic
GGAGCTTGGCGATGATGCAG+AGG 0.632857 1_3:-3746537 Msa0097910:CDS
TTCTCCTGGAACCGTCCCCG+TGG 0.634316 1_3:+3746588 None:intergenic
TATTCGTGACTTGGAGAAGG+AGG 0.635163 1_3:-3749913 Msa0097910:CDS
GCTCCAAGACAAATTCAGCC+CGG 0.637474 1_3:-3759723 Msa0097910:CDS
AGAGGTGACATCAACTCCAA+AGG 0.638169 1_3:+3757077 None:intergenic
CATCCTGTTTCATCATCACA+GGG 0.640900 1_3:-3759699 Msa0097910:CDS
ACAGCAAGAAAGAACAGAAG+CGG 0.642134 1_3:-3760663 Msa0097910:five_prime_UTR
CAAGACATGACTGACAGCCA+TGG 0.642401 1_3:-3746917 Msa0097910:CDS
TAGGCATAAAAGACACAAGA+GGG 0.646717 1_3:-3746612 Msa0097910:CDS
TGACCGCAAGAAGTCTAGGA+AGG 0.647233 1_3:-3746762 Msa0097910:intron
GCAACTTGCGAAATGCATCA+CGG 0.647762 1_3:+3749755 None:intergenic
AAGGCATCAGAGCAGTATGG+AGG 0.652072 1_3:-3746843 Msa0097910:CDS
GCACATAAAACTATTAGCCA+GGG 0.652408 1_3:-3755970 Msa0097910:CDS
GCAAGAAAGAACAGAAGCGG+CGG 0.652413 1_3:-3760660 Msa0097910:five_prime_UTR
AGTTAGTAAAGTCATCAGCA+AGG 0.652933 1_3:+3747839 None:intergenic
GGAGGTGCATGCATTTGAGG+CGG 0.653398 1_3:+3759395 None:intergenic
TGACAGCCATGGTTATAGAG+AGG 0.655215 1_3:-3746906 Msa0097910:CDS
AGCACCTCTTCAAGATATGG+AGG 0.656627 1_3:-3755471 Msa0097910:intron
CCGAATTGTTGTGAAGTCAT+GGG 0.660354 1_3:+3759837 None:intergenic
GATGATGAAACAGGATGACC+GGG 0.660914 1_3:+3759705 None:intergenic
CCGACCATACCACACGTCAA+GGG 0.664508 1_3:-3760583 Msa0097910:five_prime_UTR
GTTACAGCTGCAGCACTCTG+AGG 0.670283 1_3:+3759344 None:intergenic
TAACATCATCCACAAGATGG+AGG 0.670995 1_3:-3754274 Msa0097910:intron
TGCAGCACTCTGAGGTACTG+AGG 0.673442 1_3:+3759352 None:intergenic
GAAGTCATGGGAACAAATGG+TGG 0.676169 1_3:+3759849 None:intergenic
GGGTCAAAGGAAGAAGCTAG+AGG 0.686231 1_3:-3754473 Msa0097910:CDS
TGAGGTACTGAGGACGACCA+AGG 0.686869 1_3:+3759362 None:intergenic
ATATAGGAACGAGTCCGTCG+GGG 0.690250 1_3:-3749790 Msa0097910:intron
GTAGGCATAAAAGACACAAG+AGG 0.702923 1_3:-3746613 Msa0097910:CDS
GTATGGTCGGAATCGTTGTG+AGG 0.703400 1_3:+3760596 None:intergenic
TGTTCATTCTGATTGGACGT+GGG 0.712631 1_3:-3754799 Msa0097910:CDS
TGTTGTGGAACAGATGTCAG+TGG 0.716753 1_3:+3759645 None:intergenic
AAGACACAAGAGGGACCACG+GGG 0.722637 1_3:-3746603 Msa0097910:CDS
ATGCTGCTGAGGAACACCGG+CGG 0.733976 1_3:-3751817 Msa0097910:CDS
ACAGTGTATAGAGATTGAGG+AGG 0.757065 1_3:+3759561 None:intergenic
TTCTTACTGCTAAAACACAG+TGG 0.768613 1_3:-3749708 Msa0097910:CDS
GCGAAAACAAGCTTTCAACG+AGG 0.790814 1_3:-3754637 Msa0097910:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTCTTTTTTTTAAGAT+AGG - chr1_3:3746358-3746377 Msa0097910:three_prime_UTR 10.0%
!!! TTTTTCTTTTTTTTAAGATA+GGG - chr1_3:3746359-3746378 Msa0097910:three_prime_UTR 10.0%
!! AAGAATAATATAATAACATA+TGG + chr1_3:3751990-3752009 None:intergenic 10.0%
!! AAAATTTAATGTTATCATTA+TGG - chr1_3:3755756-3755775 Msa0097910:CDS 10.0%
!! TATATTATATTAATTCAGAA+AGG + chr1_3:3756374-3756393 None:intergenic 10.0%
!! AGAAATAAACAATATTAAAT+AGG + chr1_3:3758914-3758933 None:intergenic 10.0%
!!! ATAATAAAATATATTTCTGT+AGG - chr1_3:3759159-3759178 Msa0097910:intron 10.0%
!!! ATTTTATAAATAATTTTTGC+AGG - chr1_3:3759821-3759840 Msa0097910:CDS 10.0%
!!! TGACTTATACATATTTTTTT+TGG - chr1_3:3746462-3746481 Msa0097910:three_prime_UTR 15.0%
!!! ATTTATTTTATGTTTGATAG+TGG + chr1_3:3746919-3746938 None:intergenic 15.0%
!! ATTTAAAAGTTATGAAAAGA+AGG + chr1_3:3747731-3747750 None:intergenic 15.0%
!!! ATTTACCCAATTTTTTTTAA+TGG - chr1_3:3750297-3750316 Msa0097910:intron 15.0%
!! AAATGCCATTAAAAAAAATT+GGG + chr1_3:3750305-3750324 None:intergenic 15.0%
!! AAAATGCCATTAAAAAAAAT+TGG + chr1_3:3750306-3750325 None:intergenic 15.0%
!! TTGATATAATAATCTTTCAT+GGG - chr1_3:3750514-3750533 Msa0097910:intron 15.0%
!!! AATTGATTTAATTAATGACA+CGG + chr1_3:3750712-3750731 Msa0097920:CDS 15.0%
!!! ATATTAGTAAAATCTGTTTT+AGG - chr1_3:3751726-3751745 Msa0097910:intron 15.0%
!!! GAATCTTATTTTTATTTTGT+TGG - chr1_3:3752988-3753007 Msa0097910:intron 15.0%
!! AAAATACTTGAATATAATGA+AGG - chr1_3:3753075-3753094 Msa0097910:intron 15.0%
!! AAATACTTGAATATAATGAA+GGG - chr1_3:3753076-3753095 Msa0097910:intron 15.0%
!!! ATATAAAAAAAAGTGTTTCA+AGG - chr1_3:3753231-3753250 Msa0097910:intron 15.0%
!!! TATAAAAAAAAGTGTTTCAA+GGG - chr1_3:3753232-3753251 Msa0097910:intron 15.0%
!!! ATTTACTGCTTATTTTATTT+TGG + chr1_3:3754409-3754428 None:intergenic 15.0%
!! TTCAAAAATTGAAAGAATAA+TGG + chr1_3:3754528-3754547 None:intergenic 15.0%
!!! TATTATTTCCATTTCATTTT+AGG - chr1_3:3755219-3755238 Msa0097910:intron 15.0%
!!! AATTTTTAAAAACATCAAGT+CGG + chr1_3:3755742-3755761 None:intergenic 15.0%
!!! AATGTTTTTTTTGTTTTTGT+TGG + chr1_3:3756061-3756080 None:intergenic 15.0%
!! ACAAAAACAAAAAAAACATT+TGG - chr1_3:3756061-3756080 Msa0097910:intron 15.0%
!! ATTATTATTATACTTCATCA+AGG + chr1_3:3756435-3756454 None:intergenic 15.0%
!!! ATAATATGAACTTTTATCAT+AGG - chr1_3:3756450-3756469 Msa0097910:intron 15.0%
!! ATAAATTAAATGCAAATATG+TGG + chr1_3:3757674-3757693 None:intergenic 15.0%
!! GTGATATAATTAAGTTATAA+TGG - chr1_3:3757845-3757864 Msa0097910:intron 15.0%
!! TATTATCTGAACTAAATAAA+TGG + chr1_3:3758365-3758384 None:intergenic 15.0%
!! TATTAGTTATAGTGTATAAT+TGG - chr1_3:3758661-3758680 Msa0097910:intron 15.0%
!! TTAATAGGTTTCTATAGTAT+AGG - chr1_3:3746492-3746511 Msa0097910:three_prime_UTR 20.0%
!! TAATAGGTTTCTATAGTATA+GGG - chr1_3:3746493-3746512 Msa0097910:three_prime_UTR 20.0%
!! TTATGAAATAGGGAAAAAAA+CGG + chr1_3:3746896-3746915 None:intergenic 20.0%
!!! CTGTTTAAATGTAAAAGTAT+GGG + chr1_3:3747635-3747654 None:intergenic 20.0%
!! ATGAATATATTCCAATAGAA+CGG - chr1_3:3747778-3747797 Msa0097910:intron 20.0%
!! AATCACATTGAAATTTAAGT+AGG - chr1_3:3747894-3747913 Msa0097910:CDS 20.0%
!! ATCACATTGAAATTTAAGTA+GGG - chr1_3:3747895-3747914 Msa0097910:CDS 20.0%
!! TTGTCTAGTTAAAATTAAGT+AGG - chr1_3:3747925-3747944 Msa0097910:intron 20.0%
!! TGTCTAGTTAAAATTAAGTA+GGG - chr1_3:3747926-3747945 Msa0097910:intron 20.0%
!! AATGTCATGTTAAAAATTAG+AGG - chr1_3:3747960-3747979 Msa0097910:intron 20.0%
!! ATGTCATGTTAAAAATTAGA+GGG - chr1_3:3747961-3747980 Msa0097910:intron 20.0%
!! ATTACATAAGGAAATATCTA+GGG + chr1_3:3748035-3748054 None:intergenic 20.0%
!! TACTGAAATTGAGATTAAAA+AGG + chr1_3:3748157-3748176 None:intergenic 20.0%
!! TATATGTGATAATAATTGTG+AGG - chr1_3:3748178-3748197 Msa0097910:intron 20.0%
!!! TTTTTGTTCTGACAAATTTT+AGG - chr1_3:3749521-3749540 Msa0097910:CDS 20.0%
!!! AAGGTATTTTTGTTTTTTCT+AGG + chr1_3:3749644-3749663 None:intergenic 20.0%
!! AAAAACAAAAATACCTTGTA+CGG - chr1_3:3749647-3749666 Msa0097910:intron 20.0%
!! TATAAAATTACTAAAGGAAC+GGG + chr1_3:3750206-3750225 None:intergenic 20.0%
!! CTATAAAATTACTAAAGGAA+CGG + chr1_3:3750207-3750226 None:intergenic 20.0%
!!! GTTCCTTTAGTAATTTTATA+GGG - chr1_3:3750206-3750225 Msa0097910:intron 20.0%
!!! TGTATTATTCTTGTTAGTTT+TGG - chr1_3:3750415-3750434 Msa0097910:intron 20.0%
!! ATATCATTAATTAACTCTCT+AGG - chr1_3:3750450-3750469 Msa0097910:intron 20.0%
!! CATGAAAGATTATTATATCA+AGG + chr1_3:3750515-3750534 Msa0097920:intron 20.0%
!! CTTGATATAATAATCTTTCA+TGG - chr1_3:3750513-3750532 Msa0097910:intron 20.0%
!!! ATTGATTTAATTAATGACAC+GGG + chr1_3:3750711-3750730 Msa0097920:CDS 20.0%
!!! AACATAATTTTATACATGGA+TGG + chr1_3:3751261-3751280 None:intergenic 20.0%
!!! CTTTTATCATTTAGAGTTAT+TGG - chr1_3:3751455-3751474 Msa0097910:intron 20.0%
!!! ATTGTATCATTCTAAAAGTA+TGG - chr1_3:3751479-3751498 Msa0097910:intron 20.0%
!! TTCTTATTCATCAATTGAAT+TGG + chr1_3:3751567-3751586 None:intergenic 20.0%
!! TCATATTTGAATCGTAATTT+AGG - chr1_3:3752174-3752193 Msa0097910:intron 20.0%
!!! ATTACAAACATTCTTTTTTC+AGG - chr1_3:3752580-3752599 Msa0097910:intron 20.0%
!! TAACATATTACTCAAGAAAA+AGG + chr1_3:3752937-3752956 None:intergenic 20.0%
!! TCTTACAATACTTATCAATT+TGG - chr1_3:3752961-3752980 Msa0097910:intron 20.0%
!! CTTACAATACTTATCAATTT+GGG - chr1_3:3752962-3752981 Msa0097910:intron 20.0%
!! TTACAATACTTATCAATTTG+GGG - chr1_3:3752963-3752982 Msa0097910:intron 20.0%
!!! TCTTATTTTTATTTTGTTGG+TGG - chr1_3:3752991-3753010 Msa0097910:intron 20.0%
!!! CTTATTTTTATTTTGTTGGT+GGG - chr1_3:3752992-3753011 Msa0097910:intron 20.0%
!!! TTATTTTTATTTTGTTGGTG+GGG - chr1_3:3752993-3753012 Msa0097910:intron 20.0%
!! ACTTACAGCAAAAAAAAAAA+TGG + chr1_3:3753192-3753211 None:intergenic 20.0%
!!! AGTTTTTGTTTTTCTATTGA+GGG - chr1_3:3753563-3753582 Msa0097910:intron 20.0%
!! AATATAGTATAGCTATATGT+AGG - chr1_3:3753638-3753657 Msa0097910:intron 20.0%
!! TATTTATAGTTAGTAAAGCT+GGG + chr1_3:3753748-3753767 None:intergenic 20.0%
!! ATATTTATAGTTAGTAAAGC+TGG + chr1_3:3753749-3753768 None:intergenic 20.0%
!! TGAAGACGTAATATAAATTA+GGG + chr1_3:3753873-3753892 None:intergenic 20.0%
!! TTGAAGACGTAATATAAATT+AGG + chr1_3:3753874-3753893 None:intergenic 20.0%
!! AAAATCTAACCTAAAAGTAA+AGG + chr1_3:3753921-3753940 None:intergenic 20.0%
!! AAATAAGCAGTAAATCATAA+TGG - chr1_3:3754414-3754433 Msa0097910:CDS 20.0%
!!! TTCTTTCAATTTTTGAATGT+TGG - chr1_3:3754531-3754550 Msa0097910:intron 20.0%
!!! TCTTTCAATTTTTGAATGTT+GGG - chr1_3:3754532-3754551 Msa0097910:intron 20.0%
!!! ATTAGGTTTTAATCTAAACA+GGG + chr1_3:3754926-3754945 None:intergenic 20.0%
!!! TATTAGGTTTTAATCTAAAC+AGG + chr1_3:3754927-3754946 None:intergenic 20.0%
!! TGAGAAACTTGAATTAAAAT+CGG + chr1_3:3754961-3754980 None:intergenic 20.0%
!!! AAATAGCTAAATTTTGCAAT+TGG - chr1_3:3754989-3755008 Msa0097910:CDS 20.0%
!!! TTTTTTTTTTCTTTCTGAAG+AGG - chr1_3:3755153-3755172 Msa0097910:intron 20.0%
!! GAAATGGAAATAATAAGAAA+AGG + chr1_3:3755214-3755233 None:intergenic 20.0%
!!! TTTTTTGTTTTTGTTGGATA+CGG + chr1_3:3756055-3756074 None:intergenic 20.0%
!! AAACAAAAAAAACATTTGGT+CGG - chr1_3:3756065-3756084 Msa0097910:intron 20.0%
!! CACTAAAAAATACATAAAGT+TGG + chr1_3:3756523-3756542 None:intergenic 20.0%
!!! CAACTTTATGTATTTTTTAG+TGG - chr1_3:3756521-3756540 Msa0097910:intron 20.0%
!! AAAATATTCAAATCCAACAT+TGG - chr1_3:3756817-3756836 Msa0097910:intron 20.0%
!!! AAATTTGAGTTGAAAAACAT+CGG + chr1_3:3757051-3757070 None:intergenic 20.0%
!! AAACTCATTCACAATATTAA+GGG + chr1_3:3757450-3757469 None:intergenic 20.0%
!! TAACTTAATTATATCACTAG+AGG + chr1_3:3757842-3757861 None:intergenic 20.0%
!! CATAAAAGATATACTTAAGT+CGG - chr1_3:3757924-3757943 Msa0097910:intron 20.0%
!! ATAAAAGATATACTTAAGTC+GGG - chr1_3:3757925-3757944 Msa0097910:intron 20.0%
!! AATTTGAAGGTAATGAATTT+CGG - chr1_3:3758129-3758148 Msa0097910:intron 20.0%
!! GTGCATTATTATAATTGTTT+AGG - chr1_3:3758411-3758430 Msa0097910:intron 20.0%
!!! TTTAGGTATATTTTACATGA+TGG - chr1_3:3758428-3758447 Msa0097910:intron 20.0%
!!! TTGTTTATTTCTTTGCAAAA+TGG - chr1_3:3758922-3758941 Msa0097910:intron 20.0%
!!! CTTCAAATAAAAGCTTTAAA+AGG + chr1_3:3758975-3758994 None:intergenic 20.0%
!! TAACTTATTATATACACTCA+AGG - chr1_3:3759068-3759087 Msa0097910:intron 20.0%
!! ATATTATTACTTCTTCAACA+TGG - chr1_3:3759182-3759201 Msa0097910:intron 20.0%
!! TATTATTACTTCTTCAACAT+GGG - chr1_3:3759183-3759202 Msa0097910:intron 20.0%
!!! AATCAACAAATTTTAGATCA+TGG + chr1_3:3759303-3759322 None:intergenic 20.0%
!!! CTATAGTAAAGAAATTTTTG+AGG - chr1_3:3759372-3759391 Msa0097910:CDS 20.0%
!!! GAAGTTTTACAATTTAGAAT+AGG - chr1_3:3760196-3760215 Msa0097910:intron 20.0%
!! TTTATCTAATCATTGCAAAA+AGG + chr1_3:3760397-3760416 None:intergenic 20.0%
!! AATATTTGCATATAATGTTC+TGG - chr1_3:3760635-3760654 Msa0097910:five_prime_UTR 20.0%
!!! TTCTTTTTTTTAAGATAGGG+TGG - chr1_3:3746362-3746381 Msa0097910:three_prime_UTR 25.0%
!!! TTTTTTGGTGATCGTTTAAT+AGG - chr1_3:3746477-3746496 Msa0097910:three_prime_UTR 25.0%
! TAAGAAATAAACCCTCAATT+TGG + chr1_3:3746550-3746569 None:intergenic 25.0%
! TATTTCTTATATTCTGCACT+TGG - chr1_3:3746561-3746580 Msa0097910:CDS 25.0%
! ATTACTCTGCATCTTAAAAT+AGG + chr1_3:3746594-3746613 None:intergenic 25.0%
! GTATAATTTAGATGCCAATT+TGG - chr1_3:3746640-3746659 Msa0097910:CDS 25.0%
! TATCTAATTAATCTGCTGAA+TGG - chr1_3:3746715-3746734 Msa0097910:intron 25.0%
! TTCATAGATAAGACAAAGAT+TGG + chr1_3:3746862-3746881 None:intergenic 25.0%
! TTTGTCTTATCTATGAATTG+TGG - chr1_3:3746865-3746884 Msa0097910:CDS 25.0%
!!! TTGATAGTGGTTATGAAATA+GGG + chr1_3:3746906-3746925 None:intergenic 25.0%
!!! TTTGATAGTGGTTATGAAAT+AGG + chr1_3:3746907-3746926 None:intergenic 25.0%
! TTTGTTTGAATATATGGCAT+AGG + chr1_3:3747220-3747239 None:intergenic 25.0%
! GGAAAAACTTTCAAAAAGTA+AGG + chr1_3:3747362-3747381 None:intergenic 25.0%
! ACTGAAAAATTGTAAAGGAT+GGG + chr1_3:3747433-3747452 None:intergenic 25.0%
! AACTGAAAAATTGTAAAGGA+TGG + chr1_3:3747434-3747453 None:intergenic 25.0%
! TGTGAACTGAAAAATTGTAA+AGG + chr1_3:3747438-3747457 None:intergenic 25.0%
! GCTGTTTAAATGTAAAAGTA+TGG + chr1_3:3747636-3747655 None:intergenic 25.0%
!!! AAGTAATGTGTTTTAAATGC+TGG - chr1_3:3747701-3747720 Msa0097910:CDS 25.0%
! TCACATTGAAATTTAAGTAG+GGG - chr1_3:3747896-3747915 Msa0097910:CDS 25.0%
! GTCTAGTTAAAATTAAGTAG+GGG - chr1_3:3747927-3747946 Msa0097910:intron 25.0%
! TCTAGTTAAAATTAAGTAGG+GGG - chr1_3:3747928-3747947 Msa0097910:intron 25.0%
! TGTCATGTTAAAAATTAGAG+GGG - chr1_3:3747962-3747981 Msa0097910:intron 25.0%
! GATTACATAAGGAAATATCT+AGG + chr1_3:3748036-3748055 None:intergenic 25.0%
! ACTGAAATTGAGATTACATA+AGG + chr1_3:3748047-3748066 None:intergenic 25.0%
! TTTACCCAAAACTCAAAATA+GGG + chr1_3:3748283-3748302 None:intergenic 25.0%
!! TTTTACCCAAAACTCAAAAT+AGG + chr1_3:3748284-3748303 None:intergenic 25.0%
!!! GTTTCTGGCTTAAATAAAAA+TGG - chr1_3:3748700-3748719 Msa0097910:intron 25.0%
!! TAGTTGTCACACATATATTT+TGG - chr1_3:3749153-3749172 Msa0097910:intron 25.0%
! AAAAACTCAATTCTCACATA+AGG + chr1_3:3749408-3749427 None:intergenic 25.0%
! AATAATTGAAAAACCGTACA+AGG + chr1_3:3749663-3749682 None:intergenic 25.0%
!!! TGTCATTTTTTATCATCTGT+TGG - chr1_3:3749869-3749888 Msa0097910:intron 25.0%
!!! ATTTTAACAACTGCTCTATA+TGG - chr1_3:3750051-3750070 Msa0097910:intron 25.0%
!! CGTTCCTTTAGTAATTTTAT+AGG - chr1_3:3750205-3750224 Msa0097910:intron 25.0%
! TCACCCTATAAAATTACTAA+AGG + chr1_3:3750212-3750231 None:intergenic 25.0%
!! ATTTTATAGGGTGATCTAAT+TGG - chr1_3:3750218-3750237 Msa0097910:intron 25.0%
!! TTTTATAGGGTGATCTAATT+GGG - chr1_3:3750219-3750238 Msa0097910:intron 25.0%
! CAAAAAAGAAACTAATAGGT+GGG + chr1_3:3750329-3750348 None:intergenic 25.0%
! GAAGCAAAAAAGAAACTAAT+AGG + chr1_3:3750333-3750352 None:intergenic 25.0%
! TGTTTAAATATTTATGCACG+CGG - chr1_3:3750372-3750391 Msa0097910:intron 25.0%
!!! ATCTTTTCTTTATTAGCTTG+CGG - chr1_3:3750479-3750498 Msa0097910:intron 25.0%
! ATATAATAATCTTTCATGGG+TGG - chr1_3:3750517-3750536 Msa0097910:intron 25.0%
!! TGTAACTGTTTTCCATTATT+TGG - chr1_3:3750843-3750862 Msa0097910:intron 25.0%
! ACAAATAGGTAAGAAATTGT+CGG + chr1_3:3750869-3750888 None:intergenic 25.0%
!! TGAACGGAAATTTTACAAAT+AGG + chr1_3:3750883-3750902 None:intergenic 25.0%
!! AATTTTTGAATCAAGTGAGT+TGG + chr1_3:3751238-3751257 None:intergenic 25.0%
!! GCAGAACATAATTTTATACA+TGG + chr1_3:3751265-3751284 None:intergenic 25.0%
!! CTTGCTAATTTAAAATTTCC+CGG - chr1_3:3751348-3751367 Msa0097910:intron 25.0%
!! ATCAATTGAATTGGTTTCAA+AGG + chr1_3:3751558-3751577 None:intergenic 25.0%
! ATTGCAAAAGAGAACAATAA+TGG + chr1_3:3751632-3751651 None:intergenic 25.0%
! GAATAGAAAAGATTCTTGAT+TGG + chr1_3:3751699-3751718 None:intergenic 25.0%
! ATCTCCTCTATTAAAAAACT+TGG - chr1_3:3751959-3751978 Msa0097910:intron 25.0%
! CCTAAAAGAGTAAAATAAAG+CGG + chr1_3:3752030-3752049 None:intergenic 25.0%
!! ATTTGAAACACAACAATGAA+TGG + chr1_3:3752146-3752165 None:intergenic 25.0%
! AAAATGAAGGATATGATGTA+AGG + chr1_3:3752315-3752334 None:intergenic 25.0%
! ATATCAAAAGCCAGATAAAA+CGG + chr1_3:3752366-3752385 None:intergenic 25.0%
! TTTATCATCCATTCAGTATT+TGG - chr1_3:3752395-3752414 Msa0097910:intron 25.0%
! TTATCATCCATTCAGTATTT+GGG - chr1_3:3752396-3752415 Msa0097910:intron 25.0%
! AGTAAATGCACAAATTTATG+TGG + chr1_3:3752518-3752537 None:intergenic 25.0%
! AGATTTATTTGAAAGCTACA+TGG - chr1_3:3752801-3752820 Msa0097910:intron 25.0%
! ATATCATTTAGGTCTATTGT+TGG - chr1_3:3752890-3752909 Msa0097910:intron 25.0%
! TTACTCAAGAAAAAGGTTTA+TGG + chr1_3:3752930-3752949 None:intergenic 25.0%
!!! TATTTTTATTTTGTTGGTGG+GGG - chr1_3:3752994-3753013 Msa0097910:intron 25.0%
!! TCATTGTAGCATTTACATTT+TGG - chr1_3:3753047-3753066 Msa0097910:intron 25.0%
! GTTCACATATTTATCAATGA+AGG - chr1_3:3753275-3753294 Msa0097910:intron 25.0%
! ACATATTTATCAATGAAGGA+AGG - chr1_3:3753279-3753298 Msa0097910:intron 25.0%
! CATATTTATCAATGAAGGAA+GGG - chr1_3:3753280-3753299 Msa0097910:intron 25.0%
! GAAAATAGAAATCAAATGGA+AGG + chr1_3:3753308-3753327 None:intergenic 25.0%
! CTTGGAAAATAGAAATCAAA+TGG + chr1_3:3753312-3753331 None:intergenic 25.0%
! AATGATCCACAACAAAATTA+TGG + chr1_3:3753529-3753548 None:intergenic 25.0%
! CTCAATAGAAAAACAAAAAC+TGG + chr1_3:3753564-3753583 None:intergenic 25.0%
!!! CAGTTTTTGTTTTTCTATTG+AGG - chr1_3:3753562-3753581 Msa0097910:intron 25.0%
!! ATTAACGGGTATTCAAATTT+CGG - chr1_3:3753595-3753614 Msa0097910:intron 25.0%
! TAACTTTGTAACTAACTTAG+TGG + chr1_3:3753717-3753736 None:intergenic 25.0%
!! TGGTTCTGTTATTACATAAA+TGG + chr1_3:3753802-3753821 None:intergenic 25.0%
!!! ATTAGTGAACCTTTACTTTT+AGG - chr1_3:3753909-3753928 Msa0097910:intron 25.0%
!!! ACTTTTAGGTTAGATTTTAG+TGG - chr1_3:3753923-3753942 Msa0097910:intron 25.0%
!!! CTTTTAGGTTAGATTTTAGT+GGG - chr1_3:3753924-3753943 Msa0097910:intron 25.0%
! TTTGATGAAATGTACCTATA+TGG + chr1_3:3753985-3754004 None:intergenic 25.0%
! TACATTTATGGCTTATGATT+GGG + chr1_3:3754365-3754384 None:intergenic 25.0%
! TTACATTTATGGCTTATGAT+TGG + chr1_3:3754366-3754385 None:intergenic 25.0%
!!! TGGATTTTGGTTTACATTTA+TGG + chr1_3:3754377-3754396 None:intergenic 25.0%
!! CAAAAACCAGTAAATAGTTT+TGG + chr1_3:3754686-3754705 None:intergenic 25.0%
!!! AAACTATTTACTGGTTTTTG+TGG - chr1_3:3754686-3754705 Msa0097910:CDS 25.0%
!!! AGCTAGTTAGTTTTTAATTC+TGG - chr1_3:3754752-3754771 Msa0097910:intron 25.0%
!!! GCTAGTTAGTTTTTAATTCT+GGG - chr1_3:3754753-3754772 Msa0097910:intron 25.0%
! TAAAACCTAATAATGAGCAT+TGG - chr1_3:3754935-3754954 Msa0097910:intron 25.0%
! ACAAAGGATAATAGTAAGAA+TGG + chr1_3:3755031-3755050 None:intergenic 25.0%
! TTATCCTTTGTGTAAACTTT+AGG - chr1_3:3755040-3755059 Msa0097910:CDS 25.0%
!! TTTTCCTAAAGTTTACACAA+AGG + chr1_3:3755047-3755066 None:intergenic 25.0%
!! TTTGTGTAAACTTTAGGAAA+AGG - chr1_3:3755046-3755065 Msa0097910:CDS 25.0%
! ACTATTCACCTAAAATGAAA+TGG + chr1_3:3755230-3755249 None:intergenic 25.0%
! ACTAAAAGAACTTATTTACC+TGG + chr1_3:3755333-3755352 None:intergenic 25.0%
! AAAATGAACATGAGAAATAG+TGG - chr1_3:3755402-3755421 Msa0097910:intron 25.0%
!!! TCAGTCACTTTTTAAATTTC+TGG + chr1_3:3755501-3755520 None:intergenic 25.0%
!!! CCACTTTTAATTAATGTTTC+TGG + chr1_3:3755585-3755604 None:intergenic 25.0%
! CCAGAAACATTAATTAAAAG+TGG - chr1_3:3755582-3755601 Msa0097910:intron 25.0%
!! TTTTTGCATATTTGTGATAG+TGG + chr1_3:3755824-3755843 None:intergenic 25.0%
!!! TTCTTCTTTTTTTCTGTGAT+TGG + chr1_3:3756129-3756148 None:intergenic 25.0%
!! TTTTCCAATAACAAACAACT+CGG + chr1_3:3756801-3756820 None:intergenic 25.0%
!! AACTTACAAGTCAATTTTGT+GGG - chr1_3:3756882-3756901 Msa0097910:intron 25.0%
!! ATACATGACTATTGAGTTTT+AGG + chr1_3:3756918-3756937 None:intergenic 25.0%
!! TGCTTGTGTATTCATTTTAA+TGG - chr1_3:3757071-3757090 Msa0097910:intron 25.0%
!!! GCTTGTGTATTCATTTTAAT+GGG - chr1_3:3757072-3757091 Msa0097910:intron 25.0%
!!! CATTTTAATGGGTATGATAT+AGG - chr1_3:3757083-3757102 Msa0097910:CDS 25.0%
!! TTTTATGCTCTCTATTTTGT+AGG - chr1_3:3757299-3757318 Msa0097910:intron 25.0%
! TACTCCAAAAGATTTATTTG+AGG - chr1_3:3757371-3757390 Msa0097910:intron 25.0%
!! ACATCCTCAAATAAATCTTT+TGG + chr1_3:3757378-3757397 None:intergenic 25.0%
! CAAACTCATTCACAATATTA+AGG + chr1_3:3757451-3757470 None:intergenic 25.0%
! ATCATGATTCAGAAGAAAAT+AGG + chr1_3:3757616-3757635 None:intergenic 25.0%
!! TTTTCTTGGCATTTATTAGA+AGG - chr1_3:3758263-3758282 Msa0097910:intron 25.0%
! ATATGTGTGAAATGAACAAA+AGG + chr1_3:3758558-3758577 None:intergenic 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG - chr1_3:3758713-3758732 Msa0097910:intron 25.0%
!! GGACAATATTTTATTGCAAA+TGG - chr1_3:3758734-3758753 Msa0097910:intron 25.0%
!! GATTCATATTTCACAGTTTT+TGG - chr1_3:3759115-3759134 Msa0097910:intron 25.0%
! ACTTCCTTATATAGTTCAAT+TGG - chr1_3:3759340-3759359 Msa0097910:CDS 25.0%
! ATCTCCAATTGAACTATATA+AGG + chr1_3:3759347-3759366 None:intergenic 25.0%
! TTGATATTATGTTTCCTTTC+AGG - chr1_3:3759619-3759638 Msa0097910:CDS 25.0%
! TAATCATTGCAAAAAGGTTA+GGG + chr1_3:3760391-3760410 None:intergenic 25.0%
! CAATGAAATTTGAAGATTTG+TGG + chr1_3:3760588-3760607 None:intergenic 25.0%
! ATATAATGTTCTGGCAAATA+CGG - chr1_3:3760644-3760663 Msa0097910:five_prime_UTR 25.0%
!!! TTTTAGTTCTTTCAGTCAAA+TGG + chr1_3:3760687-3760706 None:intergenic 25.0%
!! AAAAGGAAAGTTTTATACCC+TGG + chr1_3:3746335-3746354 None:intergenic 30.0%
!!! TTTTTTTTAAGATAGGGTGG+CGG - chr1_3:3746365-3746384 Msa0097910:three_prime_UTR 30.0%
TTTGATAAGCTCTTCAAGAT+AGG - chr1_3:3746423-3746442 Msa0097910:three_prime_UTR 30.0%
CTATAGTATAGGGACTAATT+CGG - chr1_3:3746503-3746522 Msa0097910:three_prime_UTR 30.0%
ATAGATAAGACAAAGATTGG+AGG + chr1_3:3746859-3746878 None:intergenic 30.0%
! CATCTTTTTATCTGCAGTTT+CGG - chr1_3:3746993-3747012 Msa0097910:CDS 30.0%
TGCCATATATTCAAACAAAC+AGG - chr1_3:3747221-3747240 Msa0097910:intron 30.0%
TGCATATGATTGTTTATGTG+AGG + chr1_3:3747286-3747305 None:intergenic 30.0%
CACATAAACAATCATATGCA+TGG - chr1_3:3747286-3747305 Msa0097910:intron 30.0%
ACAAACTAGTAATCTACAAC+GGG + chr1_3:3747386-3747405 None:intergenic 30.0%
GACAAACTAGTAATCTACAA+CGG + chr1_3:3747387-3747406 None:intergenic 30.0%
!! AATTGTAAAGGATGGGTTAA+AGG + chr1_3:3747426-3747445 None:intergenic 30.0%
! AATGCTACTTGATTTGATCA+TGG - chr1_3:3747754-3747773 Msa0097910:intron 30.0%
CTAGTTAAAATTAAGTAGGG+GGG - chr1_3:3747929-3747948 Msa0097910:intron 30.0%
TAGTTAAAATTAAGTAGGGG+GGG - chr1_3:3747930-3747949 Msa0097910:intron 30.0%
GTCATGTTAAAAATTAGAGG+GGG - chr1_3:3747963-3747982 Msa0097910:intron 30.0%
!! TGACATTTTAACAAACCTCA+AGG - chr1_3:3747992-3748011 Msa0097910:intron 30.0%
!! GACATTTTAACAAACCTCAA+GGG - chr1_3:3747993-3748012 Msa0097910:intron 30.0%
AGAAAGAAACTAGAACGTAA+AGG - chr1_3:3748210-3748229 Msa0097910:intron 30.0%
!! ACTCAAAATAGGGCTATTTT+GGG + chr1_3:3748273-3748292 None:intergenic 30.0%
! AACTCAAAATAGGGCTATTT+TGG + chr1_3:3748274-3748293 None:intergenic 30.0%
!!! AATAGCCCTATTTTGAGTTT+TGG - chr1_3:3748275-3748294 Msa0097910:intron 30.0%
!!! ATAGCCCTATTTTGAGTTTT+GGG - chr1_3:3748276-3748295 Msa0097910:intron 30.0%
ATGAATCATTACGAGTCAAT+AGG - chr1_3:3748382-3748401 Msa0097910:intron 30.0%
TGAATCATTACGAGTCAATA+GGG - chr1_3:3748383-3748402 Msa0097910:intron 30.0%
TGAGCAGATAGGAAAAATTA+GGG - chr1_3:3748624-3748643 Msa0097910:intron 30.0%
GACAATGAAGTTAGATTATC+AGG - chr1_3:3748919-3748938 Msa0097910:intron 30.0%
ATAATAATCATCCACGAGTT+GGG + chr1_3:3748990-3749009 None:intergenic 30.0%
TATAATAATCATCCACGAGT+TGG + chr1_3:3748991-3749010 None:intergenic 30.0%
! ATTGCTTGTATACTAGTTTC+TGG + chr1_3:3749044-3749063 None:intergenic 30.0%
AAGCTCTTAGTATCAATTAG+AGG - chr1_3:3749070-3749089 Msa0097910:intron 30.0%
!!! TCAATTATTTGTTTTGCCCA+AGG - chr1_3:3749111-3749130 Msa0097910:intron 30.0%
!!! CAATTATTTGTTTTGCCCAA+GGG - chr1_3:3749112-3749131 Msa0097910:intron 30.0%
!!! AATTATTTGTTTTGCCCAAG+GGG - chr1_3:3749113-3749132 Msa0097910:intron 30.0%
GAATGTGACTGTAAAAGAAT+TGG - chr1_3:3749178-3749197 Msa0097910:intron 30.0%
!! AATTGGTGACTTTGTTGTTA+AGG - chr1_3:3749195-3749214 Msa0097910:intron 30.0%
GTAGCTAATTGAATCTCAAT+AGG - chr1_3:3749250-3749269 Msa0097910:intron 30.0%
! ATTACTACAACAAGAGTACA+AGG - chr1_3:3749771-3749790 Msa0097910:CDS 30.0%
CATAAACCTTTCATGATCAT+TGG + chr1_3:3749965-3749984 None:intergenic 30.0%
CAATGATCATGAAAGGTTTA+TGG - chr1_3:3749963-3749982 Msa0097910:intron 30.0%
GTTAAAATTTCTCCTGACTT+GGG + chr1_3:3750039-3750058 None:intergenic 30.0%
TGTTAAAATTTCTCCTGACT+TGG + chr1_3:3750040-3750059 None:intergenic 30.0%
! CAGAATCAATCTCACATTTT+AGG + chr1_3:3750149-3750168 None:intergenic 30.0%
GCAAAAAAGAAACTAATAGG+TGG + chr1_3:3750330-3750349 None:intergenic 30.0%
TAAACACTGCATTCATAAGA+GGG + chr1_3:3750358-3750377 None:intergenic 30.0%
TTAAACACTGCATTCATAAG+AGG + chr1_3:3750359-3750378 None:intergenic 30.0%
TTTAATTAATGACACGGGAA+GGG + chr1_3:3750706-3750725 Msa0097920:CDS 30.0%
ATTTAATTAATGACACGGGA+AGG + chr1_3:3750707-3750726 Msa0097920:CDS 30.0%
TTGTAAAATTTCCGTTCAGT+TGG - chr1_3:3750885-3750904 Msa0097910:intron 30.0%
CTTCATTTCTCTCTTATATC+TGG - chr1_3:3751306-3751325 Msa0097910:intron 30.0%
! TTCTAAAAGTATGGCCTATT+TGG - chr1_3:3751488-3751507 Msa0097910:intron 30.0%
! ATTGTTCTCTTTTGCAATCT+TGG - chr1_3:3751634-3751653 Msa0097910:intron 30.0%
CTTGATTGGACAAGATATAA+AGG + chr1_3:3751685-3751704 None:intergenic 30.0%
TTTGGTATATGCAAATAAGC+TGG - chr1_3:3751912-3751931 Msa0097910:intron 30.0%
GGTAAGTATTCTTTATGTCA+TGG - chr1_3:3751933-3751952 Msa0097910:intron 30.0%
!!! CCTACCAAGTTTTTTAATAG+AGG + chr1_3:3751966-3751985 None:intergenic 30.0%
CCTCTATTAAAAAACTTGGT+AGG - chr1_3:3751963-3751982 Msa0097910:intron 30.0%
TAAAGCGGTAATAAAGATGA+AGG + chr1_3:3752015-3752034 None:intergenic 30.0%
!!! CCGCTTTATTTTACTCTTTT+AGG - chr1_3:3752027-3752046 Msa0097910:intron 30.0%
!! AAATGCATTTAAAGCGCTTT+TGG - chr1_3:3752057-3752076 Msa0097910:intron 30.0%
ACAATGAATGGAAAAACTGA+AGG + chr1_3:3752134-3752153 None:intergenic 30.0%
GTTCACTTTATGCAAAATGA+AGG + chr1_3:3752328-3752347 None:intergenic 30.0%
TTGTAATGAGTAACTAGTGA+AGG + chr1_3:3752567-3752586 None:intergenic 30.0%
AAAATTATACCTCCATCTTG+TGG + chr1_3:3752627-3752646 None:intergenic 30.0%
!! TGTGTTTTCTTGTTTGTGTT+AGG - chr1_3:3752664-3752683 Msa0097910:intron 30.0%
TTTATTTGAAAGCTACATGG+TGG - chr1_3:3752804-3752823 Msa0097910:intron 30.0%
TACTTGAATATAATGAAGGG+AGG - chr1_3:3753079-3753098 Msa0097910:intron 30.0%
TAGTCAAGCTAAATACTGTT+TGG + chr1_3:3753154-3753173 None:intergenic 30.0%
CTGTAAGTAAATGTGTTTCA+AGG - chr1_3:3753204-3753223 Msa0097910:intron 30.0%
! TTTTCTATTGAGGGTCAAAT+AGG - chr1_3:3753572-3753591 Msa0097910:intron 30.0%
TGAGCTTATTCTGAATAAAC+TGG + chr1_3:3753822-3753841 None:intergenic 30.0%
AAAGGTTCACTAATAGACTT+CGG + chr1_3:3753903-3753922 None:intergenic 30.0%
!! TAGATTTTAGTGGGTATAGA+TGG - chr1_3:3753933-3753952 Msa0097910:intron 30.0%
! GAATATTAGCTATTTCAGTG+TGG - chr1_3:3753959-3753978 Msa0097910:intron 30.0%
TTTCATCAAATGTTGATACG+AGG - chr1_3:3753995-3754014 Msa0097910:intron 30.0%
GAATTATAATCTCCATCCAT+GGG + chr1_3:3754031-3754050 None:intergenic 30.0%
AGAATTATAATCTCCATCCA+TGG + chr1_3:3754032-3754051 None:intergenic 30.0%
TTATAATTCTCAGCTAGCAA+TGG - chr1_3:3754042-3754061 Msa0097910:intron 30.0%
TATAATTCTCAGCTAGCAAT+GGG - chr1_3:3754043-3754062 Msa0097910:intron 30.0%
TTAGGCTAAAATTCATGTCT+AGG - chr1_3:3754204-3754223 Msa0097910:intron 30.0%
GTATAGCTAGATTAATCTGA+TGG - chr1_3:3754339-3754358 Msa0097910:intron 30.0%
TAAACCAAAATCCAAGTTCA+TGG - chr1_3:3754383-3754402 Msa0097910:intron 30.0%
!!! TTTTATTTTGGCCATGAACT+TGG + chr1_3:3754397-3754416 None:intergenic 30.0%
CAGTAAATCATAATGGCAAA+AGG - chr1_3:3754421-3754440 Msa0097910:CDS 30.0%
CAAATGCATAAATTGAATGG+GGG + chr1_3:3754601-3754620 None:intergenic 30.0%
CCAAATGCATAAATTGAATG+GGG + chr1_3:3754602-3754621 None:intergenic 30.0%
CCCAAATGCATAAATTGAAT+GGG + chr1_3:3754603-3754622 None:intergenic 30.0%
CCCATTCAATTTATGCATTT+GGG - chr1_3:3754600-3754619 Msa0097910:intron 30.0%
ACCCAAATGCATAAATTGAA+TGG + chr1_3:3754604-3754623 None:intergenic 30.0%
TTCAATTTATGCATTTGGGT+CGG - chr1_3:3754604-3754623 Msa0097910:intron 30.0%
TACTGTCCAAAACTATTTAC+TGG - chr1_3:3754677-3754696 Msa0097910:CDS 30.0%
!!! TATTTACTGGTTTTTGTGGA+CGG - chr1_3:3754690-3754709 Msa0097910:CDS 30.0%
AGCAGAATATAGGAAATTTC+TGG - chr1_3:3755100-3755119 Msa0097910:intron 30.0%
!! CATTTTAGGTGAATAGTCAT+TGG - chr1_3:3755233-3755252 Msa0097910:intron 30.0%
! TGTTCCAGTGTTATTAATAG+CGG - chr1_3:3755353-3755372 Msa0097910:intron 30.0%
AATAAAGCATGATGCATTGT+TGG - chr1_3:3755553-3755572 Msa0097910:intron 30.0%
AGTGGTTATTGCTTACATAT+TGG + chr1_3:3755806-3755825 None:intergenic 30.0%
ATTAGAGAATCAGTAGAGAA+AGG - chr1_3:3756160-3756179 Msa0097910:intron 30.0%
GAAATTAGAACCAAGAAGAA+GGG + chr1_3:3756249-3756268 None:intergenic 30.0%
TGAAATTAGAACCAAGAAGA+AGG + chr1_3:3756250-3756269 None:intergenic 30.0%
!! TCTTCTTGGTTCTAATTTCA+TGG - chr1_3:3756250-3756269 Msa0097910:intron 30.0%
ATTATACTTCATCAAGGACA+AGG + chr1_3:3756429-3756448 None:intergenic 30.0%
ATGTTACTACTATAAACGTG+TGG + chr1_3:3756485-3756504 None:intergenic 30.0%
!! AATACCGAGTTGTTTGTTAT+TGG - chr1_3:3756794-3756813 Msa0097910:intron 30.0%
! GCCTATTTAGAGCTTATAAA+AGG - chr1_3:3756851-3756870 Msa0097910:intron 30.0%
!!! GCCTTTTATAAGCTCTAAAT+AGG + chr1_3:3756855-3756874 None:intergenic 30.0%
! CAACTTACAAGTCAATTTTG+TGG - chr1_3:3756881-3756900 Msa0097910:intron 30.0%
AAACTCAATAGTCATGTATG+AGG - chr1_3:3756919-3756938 Msa0097910:intron 30.0%
AACTCAATAGTCATGTATGA+GGG - chr1_3:3756920-3756939 Msa0097910:intron 30.0%
! CTATGTACTGATACTAACTT+TGG - chr1_3:3756945-3756964 Msa0097910:intron 30.0%
AAGGTAGTAAGAGATTTAGT+TGG - chr1_3:3757219-3757238 Msa0097910:intron 30.0%
!!! TAAATCTTTTGGAGTAGAAC+CGG + chr1_3:3757367-3757386 None:intergenic 30.0%
! CTTTGAAAATCTTGAAAAGC+AGG - chr1_3:3757398-3757417 Msa0097910:intron 30.0%
TTTATCACTGTTAGTTGACT+TGG - chr1_3:3757689-3757708 Msa0097910:intron 30.0%
TGAATATTTCTTGTGTGATC+TGG - chr1_3:3757776-3757795 Msa0097910:intron 30.0%
TAAGCTACAGATAAAACACA+AGG + chr1_3:3757975-3757994 None:intergenic 30.0%
AGCTACTTGCAAAACAATAT+CGG - chr1_3:3758101-3758120 Msa0097910:intron 30.0%
AATATCGGAGATCAATTTGA+AGG - chr1_3:3758116-3758135 Msa0097910:intron 30.0%
!!! GTCCATTTCAATTCCTTTTT+TGG - chr1_3:3758161-3758180 Msa0097910:intron 30.0%
AGCCAAAAAAGGAATTGAAA+TGG + chr1_3:3758166-3758185 None:intergenic 30.0%
GAAATTGATATTGAGCTCTT+CGG + chr1_3:3758236-3758255 None:intergenic 30.0%
!!! CAATTTCACTCTTGTTTTCT+TGG - chr1_3:3758249-3758268 Msa0097910:intron 30.0%
CTTATTCTTCTCTTCTTTCT+TGG + chr1_3:3758392-3758411 None:intergenic 30.0%
ACAAAAGGCTCACATATTAT+GGG + chr1_3:3758543-3758562 None:intergenic 30.0%
AACAAAAGGCTCACATATTA+TGG + chr1_3:3758544-3758563 None:intergenic 30.0%
TCCTTGTCAAGTGTTAAATT+GGG - chr1_3:3758624-3758643 Msa0097910:intron 30.0%
! GTGAAATGAGTCAGTTATTT+TGG - chr1_3:3758712-3758731 Msa0097910:intron 30.0%
TTTGTCTCCTTATAATGTCA+TGG - chr1_3:3758813-3758832 Msa0097910:intron 30.0%
AGTCAATCCATGACATTATA+AGG + chr1_3:3758823-3758842 None:intergenic 30.0%
! ATGGATTGACTTCAAAAACA+TGG - chr1_3:3758832-3758851 Msa0097910:intron 30.0%
ACAATATTAAATAGGCCAAC+TGG + chr1_3:3758906-3758925 None:intergenic 30.0%
GTGAAATATGAATCAGATCA+TGG + chr1_3:3759109-3759128 None:intergenic 30.0%
!!! TTTCACAGTTTTTGGCTAAA+TGG - chr1_3:3759123-3759142 Msa0097910:intron 30.0%
GGAATACATTACATACTTGA+AGG - chr1_3:3759393-3759412 Msa0097910:CDS 30.0%
!! ACTTTGTTTGTTTCACCTTT+TGG - chr1_3:3759463-3759482 Msa0097910:intron 30.0%
!!! AGTTTTATTGCCAATTGCAA+TGG - chr1_3:3759524-3759543 Msa0097910:intron 30.0%
TTTCACTAATCCATTGCAAT+TGG + chr1_3:3759537-3759556 None:intergenic 30.0%
!! ATTGCAATGGATTAGTGAAA+TGG - chr1_3:3759537-3759556 Msa0097910:intron 30.0%
TATTCCAAAACAAACTCAGT+GGG - chr1_3:3759664-3759683 Msa0097910:CDS 30.0%
! ATAATTTTTGCAGGCCAAAA+AGG - chr1_3:3759830-3759849 Msa0097910:CDS 30.0%
! TTCTCTTTCTTTCTCCTTTT+TGG + chr1_3:3759847-3759866 None:intergenic 30.0%
GAAAGAAAAACGTAAAGAGA+AGG - chr1_3:3759869-3759888 Msa0097910:five_prime_UTR 30.0%
AGAGGAGAAGAAAAAAGAAA+AGG - chr1_3:3760001-3760020 Msa0097910:intron 30.0%
CTAATCATTGCAAAAAGGTT+AGG + chr1_3:3760392-3760411 None:intergenic 30.0%
ATGAAAAGTAGAAGGATTGT+TGG + chr1_3:3760462-3760481 None:intergenic 30.0%
TTACACAATCCTAAATTCAC+AGG + chr1_3:3760492-3760511 None:intergenic 30.0%
CTTTATACCAAGAGTAATGT+AGG - chr1_3:3760562-3760581 Msa0097910:intron 30.0%
TGAAGAGCTTATCAAAACAG+TGG + chr1_3:3746419-3746438 None:intergenic 35.0%
AAGCTCTTCAAGATAGGTTA+TGG - chr1_3:3746429-3746448 Msa0097910:three_prime_UTR 35.0%
TGATAATCTGACAAGAGAAG+TGG + chr1_3:3746773-3746792 None:intergenic 35.0%
TTCTCAACAAATGCAACAGT+TGG - chr1_3:3747144-3747163 Msa0097910:intron 35.0%
GGCCTGTTTGTTTGAATATA+TGG + chr1_3:3747226-3747245 None:intergenic 35.0%
CTCAATCTCTATACACTGTA+CGG - chr1_3:3747332-3747351 Msa0097910:intron 35.0%
TCAATCTCTATACACTGTAC+GGG - chr1_3:3747333-3747352 Msa0097910:intron 35.0%
TTTCAGTTCACACCATCTTA+TGG - chr1_3:3747446-3747465 Msa0097910:intron 35.0%
GTGATTCAGATTTGGAAGAA+AGG - chr1_3:3747809-3747828 Msa0097910:intron 35.0%
CATTGAAATTTAAGTAGGGG+AGG - chr1_3:3747899-3747918 Msa0097910:CDS 35.0%
AGTTAAAATTAAGTAGGGGG+GGG - chr1_3:3747931-3747950 Msa0097910:intron 35.0%
!! ATTTTAACAAACCTCAAGGG+AGG - chr1_3:3747996-3748015 Msa0097910:intron 35.0%
ACTGCACTAACTAAAACTTG+AGG - chr1_3:3748337-3748356 Msa0097910:intron 35.0%
CTGCACTAACTAAAACTTGA+GGG - chr1_3:3748338-3748357 Msa0097910:intron 35.0%
ACTAACTAAAACTTGAGGGA+GGG - chr1_3:3748342-3748361 Msa0097910:intron 35.0%
!!! AGGAGTTTTGAATGTGAGAT+CGG - chr1_3:3748409-3748428 Msa0097910:intron 35.0%
TTGAAGGAAAAGGGATAGAT+TGG - chr1_3:3748439-3748458 Msa0097910:intron 35.0%
! ATAGATTGGTTAGGCATGTT+TGG - chr1_3:3748453-3748472 Msa0097910:intron 35.0%
! TAGATTGGTTAGGCATGTTT+GGG - chr1_3:3748454-3748473 Msa0097910:intron 35.0%
GTGAGCAGATAGGAAAAATT+AGG - chr1_3:3748623-3748642 Msa0097910:intron 35.0%
GGAAAAATTAGGGTTCACTT+AGG - chr1_3:3748634-3748653 Msa0097910:intron 35.0%
CATGAAAAATCGCAAGAACA+TGG + chr1_3:3748729-3748748 None:intergenic 35.0%
! CATGTTCTTGCGATTTTTCA+TGG - chr1_3:3748727-3748746 Msa0097910:intron 35.0%
ATCGCATCTAAGTAGGATAA+TGG + chr1_3:3748761-3748780 None:intergenic 35.0%
CGAAGAACAGAAATTTACAG+AGG - chr1_3:3748862-3748881 Msa0097910:intron 35.0%
! AGAATTGATTCAACACAGAG+AGG - chr1_3:3748897-3748916 Msa0097910:intron 35.0%
ACTAAGGAAACTCGATATAC+TGG + chr1_3:3749014-3749033 None:intergenic 35.0%
GATTCAATTAGCTACTCTTG+TGG + chr1_3:3749245-3749264 None:intergenic 35.0%
! TGAACAAAGTTTCTGAAGAG+TGG + chr1_3:3749383-3749402 None:intergenic 35.0%
ACTCTTCAGAAACTTTGTTC+AGG - chr1_3:3749382-3749401 Msa0097910:intron 35.0%
CATCTCAAATATATGAGCGA+AGG + chr1_3:3749488-3749507 None:intergenic 35.0%
ATCTAGTTGGGAAAAACCTT+TGG - chr1_3:3749796-3749815 Msa0097910:intron 35.0%
! GCATGAAATTTTACCTCAAG+AGG + chr1_3:3749833-3749852 None:intergenic 35.0%
AATCCAACTGGTATCTAGTA+TGG - chr1_3:3749915-3749934 Msa0097910:CDS 35.0%
AATCCATACTAGATACCAGT+TGG + chr1_3:3749921-3749940 None:intergenic 35.0%
CATTGGAAACGTAGTAGAAA+TGG + chr1_3:3749948-3749967 None:intergenic 35.0%
ACGTTTCCAATGATCATGAA+AGG - chr1_3:3749956-3749975 Msa0097910:intron 35.0%
! TGGAAGTACATGCACATAAA+AGG + chr1_3:3749998-3750017 None:intergenic 35.0%
GGATGATATCTACAAATCAG+TGG + chr1_3:3750018-3750037 None:intergenic 35.0%
TCTGCAATGCCATTAATTGA+TGG - chr1_3:3750165-3750184 Msa0097910:intron 35.0%
AATTACTAAAGGAACGGGAA+TGG + chr1_3:3750201-3750220 None:intergenic 35.0%
GTGTGTGTGTGTAAGATATA+CGG - chr1_3:3750241-3750260 Msa0097910:intron 35.0%
AAACACTGCATTCATAAGAG+GGG + chr1_3:3750357-3750376 None:intergenic 35.0%
TCAAAACACACTAATTCTCC+TGG - chr1_3:3750556-3750575 Msa0097910:intron 35.0%
AAAGAGTTCACTTCTTCAGA+GGG - chr1_3:3750612-3750631 Msa0097910:intron 35.0%
CTGCAGGTATTATTACAACA+AGG - chr1_3:3750756-3750775 Msa0097910:intron 35.0%
AGAAATTGTCGGCCAAATAA+TGG + chr1_3:3750858-3750877 None:intergenic 35.0%
GCACATAAAACTATTAGCCA+GGG - chr1_3:3750919-3750938 Msa0097910:intron 35.0%
TAAAACTATTAGCCAGGGAA+TGG - chr1_3:3750924-3750943 Msa0097910:intron 35.0%
! TTGATTTTCAACACTGTACC+GGG + chr1_3:3751369-3751388 None:intergenic 35.0%
! CTTGATTTTCAACACTGTAC+CGG + chr1_3:3751370-3751389 None:intergenic 35.0%
AATACCTCCATATCTTGAAG+AGG + chr1_3:3751425-3751444 None:intergenic 35.0%
TGTTAGGATATATACACAGC+AGG + chr1_3:3751519-3751538 None:intergenic 35.0%
CGTGCATGAATGTTTATGTT+AGG + chr1_3:3751535-3751554 None:intergenic 35.0%
! ACCAATTAAAGCCTTATCCA+TGG + chr1_3:3751780-3751799 None:intergenic 35.0%
AATTACCTTGCAACTCTTGT+AGG - chr1_3:3751813-3751832 Msa0097910:CDS 35.0%
! AACCAATGATGGTGAAACTT+TGG - chr1_3:3751894-3751913 Msa0097910:intron 35.0%
TACCAAAGTTTCACCATCAT+TGG + chr1_3:3751899-3751918 None:intergenic 35.0%
CTGTGAATGTTCATTCTGAT+TGG - chr1_3:3752083-3752102 Msa0097910:intron 35.0%
TATAATGCCCTGAAAACACT+TGG - chr1_3:3752226-3752245 Msa0097910:intron 35.0%
TGAAGGATATGATGTAAGGT+CGG + chr1_3:3752311-3752330 None:intergenic 35.0%
ACATCTTTGTGAATTCTTCG+CGG + chr1_3:3752473-3752492 None:intergenic 35.0%
!!! ATTCTTTTTTCAGGAGTGCA+AGG - chr1_3:3752589-3752608 Msa0097910:intron 35.0%
! GTTGGTGAGAAATTTCAAGA+TGG + chr1_3:3752700-3752719 None:intergenic 35.0%
!! TTGCTGATTCAGTAAATGGT+TGG + chr1_3:3752718-3752737 None:intergenic 35.0%
!! AGCTTTGCTGATTCAGTAAA+TGG + chr1_3:3752722-3752741 None:intergenic 35.0%
CTGTTGAAAGAGTAAGAGAT+CGG - chr1_3:3752776-3752795 Msa0097910:intron 35.0%
TGTTGAAAGAGTAAGAGATC+GGG - chr1_3:3752777-3752796 Msa0097910:intron 35.0%
ATGATATGCCATGCTCAAAA+AGG + chr1_3:3752877-3752896 None:intergenic 35.0%
TTGAGCATGGCATATCATTT+AGG - chr1_3:3752879-3752898 Msa0097910:intron 35.0%
ATGAGACTATAAGAGCTAAC+AGG + chr1_3:3753031-3753050 None:intergenic 35.0%
! TTAATTTTCCGTCACATTGC+AGG - chr1_3:3753365-3753384 Msa0097910:intron 35.0%
AGTATTATCCTGCAATGTGA+CGG + chr1_3:3753376-3753395 None:intergenic 35.0%
TATCAAAGATGTTGCAGAAG+AGG + chr1_3:3753448-3753467 None:intergenic 35.0%
ACCTATCAAGCTAATCAAAG+TGG + chr1_3:3753473-3753492 None:intergenic 35.0%
!! TTTGATTAGCTTGATAGGTC+TGG - chr1_3:3753474-3753493 Msa0097910:intron 35.0%
!! TTGATTAGCTTGATAGGTCT+GGG - chr1_3:3753475-3753494 Msa0097910:intron 35.0%
ATCTTTACCAGCAAGAATGA+TGG - chr1_3:3753500-3753519 Msa0097910:intron 35.0%
TCTTTACCAGCAAGAATGAT+GGG - chr1_3:3753501-3753520 Msa0097910:intron 35.0%
! TGGGAACCATAATTTTGTTG+TGG - chr1_3:3753520-3753539 Msa0097910:intron 35.0%
TGAGGGTCAAATAGGATTAA+CGG - chr1_3:3753580-3753599 Msa0097910:intron 35.0%
AGACCAGTATAAAGACAAGT+TGG + chr1_3:3753665-3753684 None:intergenic 35.0%
TTATAGTTAGTAAAGCTGGG+CGG + chr1_3:3753745-3753764 None:intergenic 35.0%
!! TTTTAGTGGGTATAGATGGA+CGG - chr1_3:3753937-3753956 Msa0097910:intron 35.0%
GTACTCGACACAAATTTAGT+AGG + chr1_3:3754072-3754091 None:intergenic 35.0%
!! TCCTTATTGTTTTGTAGTCC+AGG - chr1_3:3754479-3754498 Msa0097910:CDS 35.0%
ACCTGGACTACAAAACAATA+AGG + chr1_3:3754483-3754502 None:intergenic 35.0%
CCCCATTCAATTTATGCATT+TGG - chr1_3:3754599-3754618 Msa0097910:intron 35.0%
TCAATTTATGCATTTGGGTC+GGG - chr1_3:3754605-3754624 Msa0097910:intron 35.0%
TAGAAACTTCGAGGAATAGA+TGG + chr1_3:3754783-3754802 None:intergenic 35.0%
TCTATTCCTCGAAGTTTCTA+TGG - chr1_3:3754783-3754802 Msa0097910:intron 35.0%
GTGGCTGCTTATAATGTTAA+TGG - chr1_3:3754805-3754824 Msa0097910:CDS 35.0%
TGACCACTTACTATTTGATC+TGG - chr1_3:3754829-3754848 Msa0097910:CDS 35.0%
GACCACTTACTATTTGATCT+GGG - chr1_3:3754830-3754849 Msa0097910:CDS 35.0%
AACCCAGATCAAATAGTAAG+TGG + chr1_3:3754835-3754854 None:intergenic 35.0%
ATTCCAAAAGAGTGAACATC+AGG - chr1_3:3754868-3754887 Msa0097910:intron 35.0%
TTCCAAAAGAGTGAACATCA+GGG - chr1_3:3754869-3754888 Msa0097910:intron 35.0%
TATATTCTGCTAAATTCCGC+CGG + chr1_3:3755091-3755110 None:intergenic 35.0%
ATGTACCTTCACAAAATCAC+AGG + chr1_3:3755129-3755148 None:intergenic 35.0%
TAGTCATTGGCGAAAAATTC+AGG - chr1_3:3755246-3755265 Msa0097910:intron 35.0%
ATTGGCGAAAAATTCAGGAT+CGG - chr1_3:3755251-3755270 Msa0097910:intron 35.0%
CAATCCGCTATTAATAACAC+TGG + chr1_3:3755360-3755379 None:intergenic 35.0%
TATGAAGTGATGAGAGAAGA+TGG - chr1_3:3755634-3755653 Msa0097910:intron 35.0%
TAAAATCCACAACCCAGATA+AGG + chr1_3:3755692-3755711 None:intergenic 35.0%
! TTATCTGGGTTGTGGATTTT+AGG - chr1_3:3755691-3755710 Msa0097910:CDS 35.0%
! TATCTGGGTTGTGGATTTTA+GGG - chr1_3:3755692-3755711 Msa0097910:CDS 35.0%
TAGTGTATCAGCTTTCTTTG+CGG - chr1_3:3755877-3755896 Msa0097910:CDS 35.0%
AAAAAACATTTGGTCGGACA+CGG - chr1_3:3756071-3756090 Msa0097910:intron 35.0%
!! AGTGGTTGATTTTCTCAATG+TGG - chr1_3:3756539-3756558 Msa0097910:intron 35.0%
ATCTAAAAAAACCCAGGACA+CGG + chr1_3:3756705-3756724 None:intergenic 35.0%
GGAACAAAAAAGGATACAGA+AGG - chr1_3:3757003-3757022 Msa0097910:intron 35.0%
CTAGAAGAACATATTGCTGA+TGG - chr1_3:3757156-3757175 Msa0097910:intron 35.0%
TTCTTACTGCTAAAACACAG+TGG - chr1_3:3757181-3757200 Msa0097910:intron 35.0%
TGGTCACAGTGATATTTAGT+TGG - chr1_3:3757239-3757258 Msa0097910:intron 35.0%
CAATGAAAGCTGGCAAAATA+TGG - chr1_3:3757265-3757284 Msa0097910:intron 35.0%
GCTCTATGTAAGTAAGTTGT+TGG - chr1_3:3757515-3757534 Msa0097910:intron 35.0%
!!! GTTGTTGGTTTACTGCTTTT+CGG - chr1_3:3757530-3757549 Msa0097910:intron 35.0%
AAATACTGATGTAGTCGCTA+CGG + chr1_3:3758052-3758071 None:intergenic 35.0%
ATTAGAAGGCAAAACAATGC+AGG - chr1_3:3758277-3758296 Msa0097910:intron 35.0%
TTAGAAGGCAAAACAATGCA+GGG - chr1_3:3758278-3758297 Msa0097910:intron 35.0%
GTCCTTGTCAAGTGTTAAAT+TGG - chr1_3:3758623-3758642 Msa0097910:intron 35.0%
TCCCAATTTAACACTTGACA+AGG + chr1_3:3758628-3758647 None:intergenic 35.0%
!! ATGGCTCAGTTATTTTGTGA+CGG - chr1_3:3758753-3758772 Msa0097910:intron 35.0%
! GAAGAAACATCTCTTTGAAG+AGG - chr1_3:3758873-3758892 Msa0097910:intron 35.0%
AGAGTTATTAGAGAGAGCTA+AGG - chr1_3:3758993-3759012 Msa0097910:intron 35.0%
AGTTAGTAAAGTCATCAGCA+AGG + chr1_3:3759053-3759072 None:intergenic 35.0%
TATTACTTCTTCAACATGGG+AGG - chr1_3:3759186-3759205 Msa0097910:intron 35.0%
GAAGGAAAAAGCTAAAGAGA+AGG - chr1_3:3759411-3759430 Msa0097910:CDS 35.0%
AGGTTGTGAACAAAACCAAA+AGG + chr1_3:3759481-3759500 None:intergenic 35.0%
!!! TTTTGGTTTTGTTCACAACC+TGG - chr1_3:3759480-3759499 Msa0097910:intron 35.0%
AAATTGCAGCAGATTAAACC+AGG + chr1_3:3759501-3759520 None:intergenic 35.0%
! GTAAGAAGTATGATCCTGAA+AGG + chr1_3:3759636-3759655 None:intergenic 35.0%
CTATTCCAAAACAAACTCAG+TGG - chr1_3:3759663-3759682 Msa0097910:CDS 35.0%
ATTCCAAAACAAACTCAGTG+GGG - chr1_3:3759665-3759684 Msa0097910:CDS 35.0%
TCTAGTGTAGCTTAGAGATT+AGG - chr1_3:3759719-3759738 Msa0097910:CDS 35.0%
GATAAGGTAAACCAAATGCA+GGG + chr1_3:3759786-3759805 None:intergenic 35.0%
AGATAAGGTAAACCAAATGC+AGG + chr1_3:3759787-3759806 None:intergenic 35.0%
! TGCATTTGGTTTACCTTATC+TGG - chr1_3:3759786-3759805 Msa0097910:CDS 35.0%
! GCATTTGGTTTACCTTATCT+GGG - chr1_3:3759787-3759806 Msa0097910:CDS 35.0%
! CATTTGGTTTACCTTATCTG+GGG - chr1_3:3759788-3759807 Msa0097910:CDS 35.0%
AGAGAAGGAGAAAAAAGAGA+AGG - chr1_3:3759884-3759903 Msa0097910:intron 35.0%
AAGAGAGAAAACATCGAAGA+AGG - chr1_3:3760027-3760046 Msa0097910:intron 35.0%
! GGATTCTGAAAAAGATGAGA+AGG - chr1_3:3760073-3760092 Msa0097910:intron 35.0%
TAGGCATAAAAGACACAAGA+GGG - chr1_3:3760277-3760296 Msa0097910:intron 35.0%
CAATATTCTCCAAAAGATGC+AGG + chr1_3:3760428-3760447 None:intergenic 35.0%
!! TGTTCAGAGTTGTTGTTTGC+GGG + chr1_3:3746209-3746228 None:intergenic 40.0%
!! CTGTTCAGAGTTGTTGTTTG+CGG + chr1_3:3746210-3746229 None:intergenic 40.0%
ACAGCAAGAAAGAACAGAAG+CGG - chr1_3:3746226-3746245 Msa0097910:three_prime_UTR 40.0%
AGAGCTTATCAAAACAGTGG+CGG + chr1_3:3746416-3746435 None:intergenic 40.0%
TCGGAGAGAGTGATATTTCA+CGG - chr1_3:3746522-3746541 Msa0097910:exon 40.0%
TATTTCACGGGACCAAATTG+AGG - chr1_3:3746535-3746554 Msa0097910:CDS 40.0%
ATTTCACGGGACCAAATTGA+GGG - chr1_3:3746536-3746555 Msa0097910:CDS 40.0%
TTAGTGACTGACTGTGTTGT+AGG - chr1_3:3746614-3746633 Msa0097910:CDS 40.0%
TGTGAAGTCATGGGAACAAA+TGG + chr1_3:3747046-3747065 None:intergenic 40.0%
CCGAATTGTTGTGAAGTCAT+GGG + chr1_3:3747055-3747074 None:intergenic 40.0%
CCCATGACTTCACAACAATT+CGG - chr1_3:3747052-3747071 Msa0097910:intron 40.0%
TCCGAATTGTTGTGAAGTCA+TGG + chr1_3:3747056-3747075 None:intergenic 40.0%
AATTGCTGACCTTGAATAGC+AGG + chr1_3:3747118-3747137 None:intergenic 40.0%
! TGATGATGAAACAGGATGAC+CGG + chr1_3:3747188-3747207 None:intergenic 40.0%
TCATCCTGTTTCATCATCAC+AGG - chr1_3:3747189-3747208 Msa0097910:intron 40.0%
CATCCTGTTTCATCATCACA+GGG - chr1_3:3747190-3747209 Msa0097910:intron 40.0%
! ATACCCTGTGATGATGAAAC+AGG + chr1_3:3747196-3747215 None:intergenic 40.0%
ACAGTGTATAGAGATTGAGG+AGG + chr1_3:3747331-3747350 None:intergenic 40.0%
CGTACAGTGTATAGAGATTG+AGG + chr1_3:3747334-3747353 None:intergenic 40.0%
AACTAGTAATCTACAACGGG+AGG + chr1_3:3747383-3747402 None:intergenic 40.0%
CCAAATCTGAATCACCATCT+TGG + chr1_3:3747804-3747823 None:intergenic 40.0%
CCAAGATGGTGATTCAGATT+TGG - chr1_3:3747801-3747820 Msa0097910:intron 40.0%
CAGATTTGGAAGAAAGGAAG+TGG - chr1_3:3747815-3747834 Msa0097910:intron 40.0%
GCAGTGTTAAGCTAGTAAAG+AGG - chr1_3:3747867-3747886 Msa0097910:CDS 40.0%
GTTAAAATTAAGTAGGGGGG+GGG - chr1_3:3747932-3747951 Msa0097910:intron 40.0%
TTAAAATTAAGTAGGGGGGG+GGG - chr1_3:3747933-3747952 Msa0097910:intron 40.0%
TAACTTCTCTGCTGCATCTT+GGG + chr1_3:3748236-3748255 None:intergenic 40.0%
ATAACTTCTCTGCTGCATCT+TGG + chr1_3:3748237-3748256 None:intergenic 40.0%
CACTAACTAAAACTTGAGGG+AGG - chr1_3:3748341-3748360 Msa0097910:intron 40.0%
ATCATTACGAGTCAATAGGG+AGG - chr1_3:3748386-3748405 Msa0097910:intron 40.0%
!!! AGTTTTGAATGTGAGATCGG+AGG - chr1_3:3748412-3748431 Msa0097910:intron 40.0%
!! GTTTTGAATGTGAGATCGGA+GGG - chr1_3:3748413-3748432 Msa0097910:intron 40.0%
!! GGAGGGTATTTGAAGGAAAA+GGG - chr1_3:3748430-3748449 Msa0097910:intron 40.0%
! GGAAAAGGGATAGATTGGTT+AGG - chr1_3:3748444-3748463 Msa0097910:intron 40.0%
AAAGAGAGTTGCAGTTTGTG+AGG - chr1_3:3748501-3748520 Msa0097910:intron 40.0%
AGTTGCAGTTTGTGAGGATA+GGG - chr1_3:3748507-3748526 Msa0097910:intron 40.0%
GGGGGTTCACAAAAAAACTA+CGG + chr1_3:3748667-3748686 None:intergenic 40.0%
AGAAACATGCAATGAAGCTG+GGG + chr1_3:3748686-3748705 None:intergenic 40.0%
CAGAAACATGCAATGAAGCT+GGG + chr1_3:3748687-3748706 None:intergenic 40.0%
TCTTCGTCATCTCACAACAA+TGG + chr1_3:3748848-3748867 None:intergenic 40.0%
! CCAACTCAACTAAGTGTTGT+GGG - chr1_3:3748960-3748979 Msa0097910:intron 40.0%
!! AGTTTCTGGTGAGATCACTA+AGG + chr1_3:3749030-3749049 None:intergenic 40.0%
! TAAGGTAGTCATGTCGTTTG+AGG - chr1_3:3749213-3749232 Msa0097910:intron 40.0%
CCTACTCTTCCTTACAAAAC+CGG - chr1_3:3749340-3749359 Msa0097910:intron 40.0%
! TCCTTACAAAACCGGCTTAA+AGG - chr1_3:3749348-3749367 Msa0097910:intron 40.0%
!! ACCTTTAAGCCGGTTTTGTA+AGG + chr1_3:3749352-3749371 None:intergenic 40.0%
AGAGTACAAGGCAATCTAGT+TGG - chr1_3:3749783-3749802 Msa0097910:CDS 40.0%
GAGTACAAGGCAATCTAGTT+GGG - chr1_3:3749784-3749803 Msa0097910:CDS 40.0%
AATGTTGCGTTCAATCCAAC+TGG - chr1_3:3749903-3749922 Msa0097910:CDS 40.0%
TGTAGATATCATCCCAAGTC+AGG - chr1_3:3750024-3750043 Msa0097910:intron 40.0%
GAAAGAGTTCACTTCTTCAG+AGG - chr1_3:3750611-3750630 Msa0097910:intron 40.0%
AGGTTACTCAGCAATCAGTA+TGG - chr1_3:3750776-3750795 Msa0097910:intron 40.0%
GACAATACCAGAAGAACTCA+AGG - chr1_3:3750798-3750817 Msa0097910:intron 40.0%
CCATATACCTTGAGTTCTTC+TGG + chr1_3:3750808-3750827 None:intergenic 40.0%
CCAGAAGAACTCAAGGTATA+TGG - chr1_3:3750805-3750824 Msa0097910:intron 40.0%
!!! TAGTTTTATGTGCCTGCTCA+CGG + chr1_3:3750912-3750931 None:intergenic 40.0%
GGCACATAAAACTATTAGCC+AGG - chr1_3:3750918-3750937 Msa0097910:intron 40.0%
!! TCCAACACTTTGAGACCTAA+TGG - chr1_3:3751024-3751043 Msa0097910:intron 40.0%
ACCATTAGGTCTCAAAGTGT+TGG + chr1_3:3751028-3751047 None:intergenic 40.0%
CAACTGGTGTAACAGAAGAT+GGG + chr1_3:3751062-3751081 None:intergenic 40.0%
ACAACTGGTGTAACAGAAGA+TGG + chr1_3:3751063-3751082 None:intergenic 40.0%
TGATTATCAGTGGCAACAAC+TGG + chr1_3:3751078-3751097 None:intergenic 40.0%
! AACTGGTCGTTGATTATCAG+TGG + chr1_3:3751088-3751107 None:intergenic 40.0%
GATAATCAACGACCAGTTTC+TGG - chr1_3:3751090-3751109 Msa0097910:intron 40.0%
! ACCAGTTTCTGGATTATCAG+TGG - chr1_3:3751101-3751120 Msa0097910:intron 40.0%
ACCACTGATAATCCAGAAAC+TGG + chr1_3:3751105-3751124 None:intergenic 40.0%
GCTTGAAGTAACGACAGAAT+GGG + chr1_3:3751136-3751155 None:intergenic 40.0%
TGCTTGAAGTAACGACAGAA+TGG + chr1_3:3751137-3751156 None:intergenic 40.0%
CACGATTCTACTTCTGTCAA+TGG - chr1_3:3751395-3751414 Msa0097910:intron 40.0%
TTATTTGAACCATGCAGCCA+TGG - chr1_3:3751760-3751779 Msa0097910:intron 40.0%
! GCCATGGATAAGGCTTTAAT+TGG - chr1_3:3751776-3751795 Msa0097910:CDS 40.0%
CTCTTGTAGGAAGCCAAAAA+AGG - chr1_3:3751826-3751845 Msa0097910:CDS 40.0%
!!! AACCACAGGAACTCCTTTTT+TGG + chr1_3:3751842-3751861 None:intergenic 40.0%
AAAAAAGGAGTTCCTGTGGT+TGG - chr1_3:3751841-3751860 Msa0097910:intron 40.0%
!! ACATTAGTTTGTCCAACCAC+AGG + chr1_3:3751856-3751875 None:intergenic 40.0%
AACTAATGTGACTCCTTCAG+AGG - chr1_3:3751867-3751886 Msa0097910:intron 40.0%
!!! TCATTGGTTTTCTCCTCTGA+AGG + chr1_3:3751883-3751902 None:intergenic 40.0%
TCAGAGGAGAAAACCAATGA+TGG - chr1_3:3751883-3751902 Msa0097910:intron 40.0%
ATGTTCATTCTGATTGGACG+TGG - chr1_3:3752089-3752108 Msa0097910:intron 40.0%
TGTTCATTCTGATTGGACGT+GGG - chr1_3:3752090-3752109 Msa0097910:intron 40.0%
GATATGCATAGTCCCATATG+AGG + chr1_3:3752289-3752308 None:intergenic 40.0%
AAGCCAGATAAAACGGTATG+CGG + chr1_3:3752359-3752378 None:intergenic 40.0%
CCTTTGACCCAAATACTGAA+TGG + chr1_3:3752406-3752425 None:intergenic 40.0%
CCATTCAGTATTTGGGTCAA+AGG - chr1_3:3752403-3752422 Msa0097910:intron 40.0%
CATCTTTGTGAATTCTTCGC+GGG + chr1_3:3752472-3752491 None:intergenic 40.0%
AGCTAACATCATCCACAAGA+TGG - chr1_3:3752612-3752631 Msa0097910:intron 40.0%
TAACATCATCCACAAGATGG+AGG - chr1_3:3752615-3752634 Msa0097910:intron 40.0%
!! CACATGAACCTTTTTGAGCA+TGG - chr1_3:3752866-3752885 Msa0097910:intron 40.0%
AAGGTTTATGGAGCTTCCTT+GGG + chr1_3:3752918-3752937 None:intergenic 40.0%
AAAGGTTTATGGAGCTTCCT+TGG + chr1_3:3752919-3752938 None:intergenic 40.0%
!! GCCACTTTGATTAGCTTGAT+AGG - chr1_3:3753469-3753488 Msa0097910:intron 40.0%
!! TGATTAGCTTGATAGGTCTG+GGG - chr1_3:3753476-3753495 Msa0097910:intron 40.0%
GAGGGTCAAATAGGATTAAC+GGG - chr1_3:3753581-3753600 Msa0097910:intron 40.0%
ACGGGTATTCAAATTTCGGT+TGG - chr1_3:3753599-3753618 Msa0097910:intron 40.0%
CGGGTATTCAAATTTCGGTT+GGG - chr1_3:3753600-3753619 Msa0097910:intron 40.0%
TTCAAATTTCGGTTGGGAGT+TGG - chr1_3:3753606-3753625 Msa0097910:intron 40.0%
GGACCAACTTGTCTTTATAC+TGG - chr1_3:3753659-3753678 Msa0097910:intron 40.0%
CTATTTCAGTGTGGCCATAT+AGG - chr1_3:3753968-3753987 Msa0097910:intron 40.0%
! TTGGCCATGAACTTGGATTT+TGG + chr1_3:3754390-3754409 None:intergenic 40.0%
GTAGCTTCTCTGATGTTACA+CGG - chr1_3:3754445-3754464 Msa0097910:CDS 40.0%
CAATTTATGCATTTGGGTCG+GGG - chr1_3:3754606-3754625 Msa0097910:intron 40.0%
ATTCCTCGAAGTTTCTATGG+TGG - chr1_3:3754786-3754805 Msa0097910:intron 40.0%
ATCGGCCAATGCTCATTATT+AGG + chr1_3:3754943-3754962 None:intergenic 40.0%
GGCGGAATTTAGCAGAATAT+AGG - chr1_3:3755090-3755109 Msa0097910:intron 40.0%
AAAAATTCAGGATCGGCTAG+AGG - chr1_3:3755258-3755277 Msa0097910:intron 40.0%
TTACCTGGAAAACAAGCAAG+CGG + chr1_3:3755318-3755337 None:intergenic 40.0%
!! TAGCGGATTGCAGAAAATAG+CGG - chr1_3:3755370-3755389 Msa0097910:intron 40.0%
! ATCTGGGTTGTGGATTTTAG+GGG - chr1_3:3755693-3755712 Msa0097910:CDS 40.0%
ATCAAGTCGGTGATGAGATT+GGG + chr1_3:3755729-3755748 None:intergenic 40.0%
AAAAGTCACCACTATTGCAG+TGG - chr1_3:3755840-3755859 Msa0097910:CDS 40.0%
CAAATCCCGATGTGTAATAG+CGG - chr1_3:3755906-3755925 Msa0097910:CDS 40.0%
CTATACCGCTATTACACATC+GGG + chr1_3:3755914-3755933 None:intergenic 40.0%
GCTATACCGCTATTACACAT+CGG + chr1_3:3755915-3755934 None:intergenic 40.0%
TTATCTATGATGCACAGACG+CGG - chr1_3:3755948-3755967 Msa0097910:CDS 40.0%
TTAGAACCAAGAAGAAGGGA+AGG + chr1_3:3756245-3756264 None:intergenic 40.0%
ACTACTATAAACGTGTGGTG+TGG + chr1_3:3756480-3756499 None:intergenic 40.0%
CGGCTAATCTAAAAAAACCC+AGG + chr1_3:3756711-3756730 None:intergenic 40.0%
AAATAACCGCCTATGAAGCA+CGG + chr1_3:3756774-3756793 None:intergenic 40.0%
GCAATATCTCTAGCCAATGT+TGG + chr1_3:3756833-3756852 None:intergenic 40.0%
! GTACTGATACTAACTTTGGC+AGG - chr1_3:3756949-3756968 Msa0097910:intron 40.0%
! CTATATTCGTGACTTGGAGA+AGG - chr1_3:3756973-3756992 Msa0097910:intron 40.0%
AGGAGGAAGAGGAACAAAAA+AGG - chr1_3:3756993-3757012 Msa0097910:intron 40.0%
TAGTTGGTCACAATGAAAGC+TGG - chr1_3:3757255-3757274 Msa0097910:intron 40.0%
GAAAGCTGGCAAAATATGGA+AGG - chr1_3:3757269-3757288 Msa0097910:intron 40.0%
GATGCAACAGCTTGATATTG+AGG + chr1_3:3757336-3757355 None:intergenic 40.0%
GCTGTTGCATCAAATACATC+CGG - chr1_3:3757345-3757364 Msa0097910:CDS 40.0%
!! AGAGTGTGTTGGTTGATGAA+AGG + chr1_3:3757561-3757580 None:intergenic 40.0%
AAATAGGACAAAGCCAGAAC+AGG + chr1_3:3757600-3757619 None:intergenic 40.0%
AGATATACTTAAGTCGGGCA+AGG - chr1_3:3757930-3757949 Msa0097910:intron 40.0%
ACACAAGGAAGATCTTTCTG+AGG + chr1_3:3757960-3757979 None:intergenic 40.0%
GTGATCTACTCGAATGGAAA+GGG + chr1_3:3758030-3758049 None:intergenic 40.0%
AGCGACTACATCAGTATTTG+AGG - chr1_3:3758053-3758072 Msa0097910:intron 40.0%
CTCACATATTATGGGACAGA+GGG + chr1_3:3758535-3758554 None:intergenic 40.0%
!! CTCAGTTATTTTGTGACGGA+GGG - chr1_3:3758757-3758776 Msa0097910:intron 40.0%
ATGGAATCTCTTGTGCATGT+TGG - chr1_3:3758851-3758870 Msa0097910:intron 40.0%
ATTAGAGAGAGCTAAGGAGA+AGG - chr1_3:3758999-3759018 Msa0097910:intron 40.0%
ACGTAAGCGTGAAGAAGAAA+AGG - chr1_3:3759435-3759454 Msa0097910:CDS 40.0%
TAGAGATTAGGTTCCTGTAC+AGG - chr1_3:3759731-3759750 Msa0097910:CDS 40.0%
CAAATGCAGGGAAATATTCC+TGG + chr1_3:3759774-3759793 None:intergenic 40.0%
CAGGAATATTTCCCTGCATT+TGG - chr1_3:3759772-3759791 Msa0097910:CDS 40.0%
TCAGATATTGACCCCAGATA+AGG + chr1_3:3759802-3759821 None:intergenic 40.0%
TCTTCTCCTCTCTATAACCA+TGG + chr1_3:3759992-3760011 None:intergenic 40.0%
TCTAGAAAATCGCGAAGACA+TGG - chr1_3:3760101-3760120 Msa0097910:intron 40.0%
ATACCTTCCTAGACTTCTTG+CGG + chr1_3:3760133-3760152 None:intergenic 40.0%
! AAGTCTAGGAAGGTATGGAA+TGG - chr1_3:3760137-3760156 Msa0097910:intron 40.0%
GTAGGCATAAAAGACACAAG+AGG - chr1_3:3760276-3760295 Msa0097910:intron 40.0%
! AGAACTTCACCTGCATCTTT+TGG - chr1_3:3760416-3760435 Msa0097910:intron 40.0%
GCGTGTACATGAAAAGTAGA+AGG + chr1_3:3760470-3760489 None:intergenic 40.0%
ATGTACACGCCTGTGAATTT+AGG - chr1_3:3760480-3760499 Msa0097910:intron 40.0%
TTTGTGGCCTACATTACTCT+TGG + chr1_3:3760572-3760591 None:intergenic 40.0%
!!! TTTTTAAGATAGGGTGGCGG+TGG - chr1_3:3746368-3746387 Msa0097910:three_prime_UTR 45.0%
CGGAGAGAGTGATATTTCAC+GGG - chr1_3:3746523-3746542 Msa0097910:exon 45.0%
CTGTCACTCTCTCTCCAAAT+TGG + chr1_3:3746657-3746676 None:intergenic 45.0%
CAGTCATTCATGCTCAGCAA+GGG - chr1_3:3747017-3747036 Msa0097910:CDS 45.0%
GAAGTCATGGGAACAAATGG+TGG + chr1_3:3747043-3747062 None:intergenic 45.0%
TCACAACAATTCGGACATGC+AGG - chr1_3:3747061-3747080 Msa0097910:intron 45.0%
CACAACAATTCGGACATGCA+GGG - chr1_3:3747062-3747081 Msa0097910:intron 45.0%
GCCGTTCCTTCATCTAATGT+CGG - chr1_3:3747088-3747107 Msa0097910:intron 45.0%
CCCGACATTAGATGAAGGAA+CGG + chr1_3:3747092-3747111 None:intergenic 45.0%
CCGTTCCTTCATCTAATGTC+GGG - chr1_3:3747089-3747108 Msa0097910:intron 45.0%
GATGATGAAACAGGATGACC+GGG + chr1_3:3747187-3747206 None:intergenic 45.0%
TGTTGTGGAACAGATGTCAG+TGG + chr1_3:3747247-3747266 None:intergenic 45.0%
GTTCACACCATCTTATGGTC+AGG - chr1_3:3747451-3747470 Msa0097910:intron 45.0%
TTCCAATAGAACGGCCAAGA+TGG - chr1_3:3747787-3747806 Msa0097910:intron 45.0%
TTTGGAAGAAAGGAAGTGGC+AGG - chr1_3:3747819-3747838 Msa0097910:intron 45.0%
TTGGAAGAAAGGAAGTGGCA+GGG - chr1_3:3747820-3747839 Msa0097910:intron 45.0%
GGAACTTGGTCTGTTTACAG+AGG - chr1_3:3747841-3747860 Msa0097910:CDS 45.0%
TAAAATTAAGTAGGGGGGGG+GGG - chr1_3:3747934-3747953 Msa0097910:intron 45.0%
AATTGCACAAACCTCCCTTG+AGG + chr1_3:3748010-3748029 None:intergenic 45.0%
TGATTCATTCACTGACCCTC+CGG + chr1_3:3748370-3748389 None:intergenic 45.0%
ATTACGAGTCAATAGGGAGG+AGG - chr1_3:3748389-3748408 Msa0097910:intron 45.0%
!! TGAGATCGGAGGGTATTTGA+AGG - chr1_3:3748423-3748442 Msa0097910:intron 45.0%
!! CGGAGGGTATTTGAAGGAAA+AGG - chr1_3:3748429-3748448 Msa0097910:intron 45.0%
GGTCAGAGGAGGACTAAATT+TGG - chr1_3:3748475-3748494 Msa0097910:intron 45.0%
GAGTTGCAGTTTGTGAGGAT+AGG - chr1_3:3748506-3748525 Msa0097910:intron 45.0%
CAGTTTGTGAGGATAGGGAT+AGG - chr1_3:3748512-3748531 Msa0097910:intron 45.0%
CGTGAGAGCTTGAGTTTCAT+AGG - chr1_3:3748537-3748556 Msa0097910:intron 45.0%
TACAGATGTTGCCTGAGTGA+GGG - chr1_3:3748599-3748618 Msa0097910:intron 45.0%
GAAACATGCAATGAAGCTGG+GGG + chr1_3:3748685-3748704 None:intergenic 45.0%
CCAGAAACATGCAATGAAGC+TGG + chr1_3:3748688-3748707 None:intergenic 45.0%
CCAGCTTCATTGCATGTTTC+TGG - chr1_3:3748685-3748704 Msa0097910:intron 45.0%
ATTATCAGGTATGCAGCTGC+AGG - chr1_3:3748933-3748952 Msa0097910:intron 45.0%
! GCCAACTCAACTAAGTGTTG+TGG - chr1_3:3748959-3748978 Msa0097910:intron 45.0%
CCCACAACACTTAGTTGAGT+TGG + chr1_3:3748963-3748982 None:intergenic 45.0%
AATCTTTCCTCACACCCCTT+GGG + chr1_3:3749130-3749149 None:intergenic 45.0%
TAATCTTTCCTCACACCCCT+TGG + chr1_3:3749131-3749150 None:intergenic 45.0%
!! CCGGTTTTGTAAGGAAGAGT+AGG + chr1_3:3749343-3749362 None:intergenic 45.0%
! ACAAAACCGGCTTAAAGGTG+AGG - chr1_3:3749353-3749372 Msa0097910:intron 45.0%
! CAAAACCGGCTTAAAGGTGA+GGG - chr1_3:3749354-3749373 Msa0097910:intron 45.0%
! AAGAGCATACTGCTGGTGAT+GGG - chr1_3:3749583-3749602 Msa0097910:intron 45.0%
AGAGGTGACATCAACTCCAA+AGG + chr1_3:3749815-3749834 None:intergenic 45.0%
GCTCTATATGGTCACTGTGA+AGG - chr1_3:3750063-3750082 Msa0097910:intron 45.0%
TATATGGTCACTGTGAAGGC+TGG - chr1_3:3750067-3750086 Msa0097910:intron 45.0%
ATATGGTCACTGTGAAGGCT+GGG - chr1_3:3750068-3750087 Msa0097910:intron 45.0%
AATTCTCCTGGATGTGACAG+AGG - chr1_3:3750568-3750587 Msa0097910:intron 45.0%
ATTCTCCTGGATGTGACAGA+GGG - chr1_3:3750569-3750588 Msa0097910:intron 45.0%
!!! TTTTGACTGTGACTTGCTGC+AGG - chr1_3:3750740-3750759 Msa0097910:intron 45.0%
!! AGTTTTATGTGCCTGCTCAC+GGG + chr1_3:3750911-3750930 None:intergenic 45.0%
!! TTGTTTCTGACACCATTCCC+TGG + chr1_3:3750939-3750958 None:intergenic 45.0%
GTCGTTACTTCAAGCACCAT+AGG - chr1_3:3751141-3751160 Msa0097910:intron 45.0%
CTCACAGTTACAACAGTGCT+TGG + chr1_3:3751174-3751193 None:intergenic 45.0%
! TGGAGCACCTCTTCAAGATA+TGG - chr1_3:3751415-3751434 Msa0097910:intron 45.0%
AGCACCTCTTCAAGATATGG+AGG - chr1_3:3751418-3751437 Msa0097910:intron 45.0%
CACAGCAGGTATCTCCAAAT+AGG + chr1_3:3751505-3751524 None:intergenic 45.0%
AGCCAAAAAAGGAGTTCCTG+TGG - chr1_3:3751837-3751856 Msa0097910:intron 45.0%
! TCGCTCACCAAGTGTTTTCA+GGG + chr1_3:3752236-3752255 None:intergenic 45.0%
! TTCGCTCACCAAGTGTTTTC+AGG + chr1_3:3752237-3752256 None:intergenic 45.0%
GCGAAAACAAGCTTTCAACG+AGG - chr1_3:3752252-3752271 Msa0097910:intron 45.0%
AGAAGCTAGAGGCTGAAGAA+AGG - chr1_3:3752427-3752446 Msa0097910:intron 45.0%
! CATGGTGGAACTTGAGAGAA+AGG - chr1_3:3752819-3752838 Msa0097910:intron 45.0%
AGGTCTATTGTTGGTACCCA+AGG - chr1_3:3752899-3752918 Msa0097910:intron 45.0%
!!! TTTATTTTGTTGGTGGGGGC+AGG - chr1_3:3752998-3753017 Msa0097910:intron 45.0%
!! GAGGAGTTGAAGTATCGCAT+TGG - chr1_3:3753098-3753117 Msa0097910:intron 45.0%
!! GATTAGCTTGATAGGTCTGG+GGG - chr1_3:3753477-3753496 Msa0097910:intron 45.0%
ATGGTTCCCATCATTCTTGC+TGG + chr1_3:3753510-3753529 None:intergenic 45.0%
!! TGGTCTTATGCTGACTTGCT+GGG - chr1_3:3753679-3753698 Msa0097910:intron 45.0%
!! TTGTTGACTTGCTGCTCGAT+GGG + chr1_3:3754246-3754265 None:intergenic 45.0%
AATGGCAATCAAGCTACCCT+AGG + chr1_3:3754510-3754529 None:intergenic 45.0%
! TGCCCTGATGTTCACTCTTT+TGG + chr1_3:3754874-3754893 None:intergenic 45.0%
! GGATTTTCCACCCCAATATG+TGG + chr1_3:3754905-3754924 None:intergenic 45.0%
GGAAAAGGAAAATGCTGCTG+AGG - chr1_3:3755061-3755080 Msa0097910:intron 45.0%
AAAATGCTGCTGAGGAACAC+CGG - chr1_3:3755069-3755088 Msa0097910:intron 45.0%
! GGAGTCCTGTGATTTTGTGA+AGG - chr1_3:3755121-3755140 Msa0097910:intron 45.0%
! AAATAGTGGAAGCTGCACAG+CGG - chr1_3:3755416-3755435 Msa0097910:intron 45.0%
AGTGATGAGAGAAGATGGAG+AGG - chr1_3:3755639-3755658 Msa0097910:intron 45.0%
AGAGGTAGTTTAGTGACGAG+AGG - chr1_3:3755663-3755682 Msa0097910:CDS 45.0%
TGACGAGAGGTTACCTTATC+TGG - chr1_3:3755676-3755695 Msa0097910:CDS 45.0%
GACGAGAGGTTACCTTATCT+GGG - chr1_3:3755677-3755696 Msa0097910:CDS 45.0%
AGGTTACCTTATCTGGGTTG+TGG - chr1_3:3755683-3755702 Msa0097910:CDS 45.0%
CATCAAGTCGGTGATGAGAT+TGG + chr1_3:3755730-3755749 None:intergenic 45.0%
CGCTATTACACATCGGGATT+TGG + chr1_3:3755908-3755927 None:intergenic 45.0%
GGTTTACACCAGAGCAATGT+CGG + chr1_3:3756099-3756118 None:intergenic 45.0%
GCAAAGCAGAGGAACAGAAA+CGG + chr1_3:3756297-3756316 None:intergenic 45.0%
AACACAAAGCAGCAAAGCAG+AGG + chr1_3:3756308-3756327 None:intergenic 45.0%
!!! TGTGGTGGTGGTCATGTTTT+TGG + chr1_3:3756335-3756354 None:intergenic 45.0%
CAAAGTCACAAAACGTGTGG+TGG + chr1_3:3756350-3756369 None:intergenic 45.0%
GGACAAAGTCACAAAACGTG+TGG + chr1_3:3756353-3756372 None:intergenic 45.0%
ACTATAAACGTGTGGTGTGG+TGG + chr1_3:3756477-3756496 None:intergenic 45.0%
GCAGGACTATATTCGTGACT+TGG - chr1_3:3756967-3756986 Msa0097910:intron 45.0%
! TATTCGTGACTTGGAGAAGG+AGG - chr1_3:3756976-3756995 Msa0097910:intron 45.0%
TGATATAGGAACGAGTCCGT+CGG - chr1_3:3757097-3757116 Msa0097910:CDS 45.0%
GCAACTTGCGAAATGCATCA+CGG + chr1_3:3757137-3757156 None:intergenic 45.0%
GTGGCGAGATTATTGCTTGA+AGG - chr1_3:3757200-3757219 Msa0097910:intron 45.0%
CAACCAACACACTCTCTCTT+TGG - chr1_3:3757566-3757585 Msa0097910:intron 45.0%
! ACTCCAAAGAGAGAGTGTGT+TGG + chr1_3:3757572-3757591 None:intergenic 45.0%
! TTTGGAGTGACATCCTGTTC+TGG - chr1_3:3757584-3757603 Msa0097910:intron 45.0%
ATACTTAAGTCGGGCAAGGT+AGG - chr1_3:3757934-3757953 Msa0097910:intron 45.0%
ATCTACTCGAATGGAAAGGG+AGG + chr1_3:3758027-3758046 None:intergenic 45.0%
GGTGATCTACTCGAATGGAA+AGG + chr1_3:3758031-3758050 None:intergenic 45.0%
GCTCACATATTATGGGACAG+AGG + chr1_3:3758536-3758555 None:intergenic 45.0%
!! GCTCAGTTATTTTGTGACGG+AGG - chr1_3:3758756-3758775 Msa0097910:intron 45.0%
TAAAGTCATCAGCAAGGCGT+TGG + chr1_3:3759047-3759066 None:intergenic 45.0%
TTCAACATGGGAGGAATGCA+AGG - chr1_3:3759195-3759214 Msa0097910:intron 45.0%
!! GGAATGCAAGGCACTTTTTG+AGG - chr1_3:3759207-3759226 Msa0097910:intron 45.0%
!! TCACCCCACTGAGTTTGTTT+TGG + chr1_3:3759671-3759690 None:intergenic 45.0%
TGACAGCCATGGTTATAGAG+AGG - chr1_3:3759983-3760002 Msa0097910:intron 45.0%
!! AAGAAGGCATCAGAGCAGTA+TGG - chr1_3:3760043-3760062 Msa0097910:intron 45.0%
GCAAGAAGTCTAGGAAGGTA+TGG - chr1_3:3760132-3760151 Msa0097910:intron 45.0%
TCTCCTGAGTCAGACAATGA+AGG - chr1_3:3760254-3760273 Msa0097910:intron 45.0%
CTACCTTCATTGTCTGACTC+AGG + chr1_3:3760260-3760279 None:intergenic 45.0%
CTGAGTCAGACAATGAAGGT+AGG - chr1_3:3760258-3760277 Msa0097910:intron 45.0%
AAAAGACACAAGAGGGACCA+CGG - chr1_3:3760284-3760303 Msa0097910:intron 45.0%
TGGAATGAGGAGCTTGAAGA+TGG - chr1_3:3760329-3760348 Msa0097910:intron 45.0%
GGAATGAGGAGCTTGAAGAT+GGG - chr1_3:3760330-3760349 Msa0097910:intron 45.0%
GAATGAGGAGCTTGAAGATG+GGG - chr1_3:3760331-3760350 Msa0097910:intron 45.0%
!! AAAAAAAGAAAAAAAAAAAA+AGG + chr1_3:3746352-3746371 None:intergenic 5.0%
!! ATAAATTTAATTCATTATAT+TGG + chr1_3:3749432-3749451 None:intergenic 5.0%
GCAAGAAAGAACAGAAGCGG+CGG - chr1_3:3746229-3746248 Msa0097910:three_prime_UTR 50.0%
GTATGGTCGGAATCGTTGTG+AGG + chr1_3:3746296-3746315 None:intergenic 50.0%
GAATCCCTTGACGTGTGGTA+TGG + chr1_3:3746313-3746332 None:intergenic 50.0%
TGGAGAGAGAGTGACAGTTC+AGG - chr1_3:3746660-3746679 Msa0097910:intron 50.0%
GGAGAGAGAGTGACAGTTCA+GGG - chr1_3:3746661-3746680 Msa0097910:intron 50.0%
CCTTGCTGAGCATGAATGAC+TGG + chr1_3:3747019-3747038 None:intergenic 50.0%
CCAGTCATTCATGCTCAGCA+AGG - chr1_3:3747016-3747035 Msa0097910:CDS 50.0%
GGCATCCCGACATTAGATGA+AGG + chr1_3:3747097-3747116 None:intergenic 50.0%
GCTCCAAGACAAATTCAGCC+CGG - chr1_3:3747166-3747185 Msa0097910:intron 50.0%
TGACCGGGCTGAATTTGTCT+TGG + chr1_3:3747172-3747191 None:intergenic 50.0%
!! ACAGCTTGCTGTGCATGTTG+TGG + chr1_3:3747262-3747281 None:intergenic 50.0%
! ATGCATGGCTTGCCTGTTTC+TGG - chr1_3:3747301-3747320 Msa0097910:intron 50.0%
GGCAATGCCTGACCATAAGA+TGG + chr1_3:3747461-3747480 None:intergenic 50.0%
TTGAGGCGGATGCTGGTATT+GGG + chr1_3:3747483-3747502 None:intergenic 50.0%
! TTTGAGGCGGATGCTGGTAT+TGG + chr1_3:3747484-3747503 None:intergenic 50.0%
AGCTGTAACGTCTGTACAGC+CGG - chr1_3:3747559-3747578 Msa0097910:intron 50.0%
CCAGATGATTGAACTCCAGC+CGG + chr1_3:3747581-3747600 None:intergenic 50.0%
CACCATCTTGGCCGTTCTAT+TGG + chr1_3:3747792-3747811 None:intergenic 50.0%
AAAGGAAGTGGCAGGGAACT+TGG - chr1_3:3747827-3747846 Msa0097910:CDS 50.0%
AAAATTAAGTAGGGGGGGGG+GGG - chr1_3:3747935-3747954 Msa0097910:intron 50.0%
TAAAACTTGAGGGAGGGCTC+CGG - chr1_3:3748348-3748367 Msa0097910:intron 50.0%
GTTAGGCATGTTTGGGTCAG+AGG - chr1_3:3748461-3748480 Msa0097910:intron 50.0%
AGGTTGCGTTGCACAAAGAG+AGG - chr1_3:3748557-3748576 Msa0097910:intron 50.0%
GGTTGCGTTGCACAAAGAGA+GGG - chr1_3:3748558-3748577 Msa0097910:intron 50.0%
CTCACTCAGGCAACATCTGT+AGG + chr1_3:3748600-3748619 None:intergenic 50.0%
CTACAGATGTTGCCTGAGTG+AGG - chr1_3:3748598-3748617 Msa0097910:intron 50.0%
AGGTGCGATCGCATCTAAGT+AGG + chr1_3:3748768-3748787 None:intergenic 50.0%
AGATGCAGAGCTGTTGCTAG+TGG + chr1_3:3749556-3749575 None:intergenic 50.0%
GCAACAGCTCTGCATCTGAT+TGG - chr1_3:3749559-3749578 Msa0097910:CDS 50.0%
! GATTGGCAAGAGCATACTGC+TGG - chr1_3:3749576-3749595 Msa0097910:intron 50.0%
! CAAGAGCATACTGCTGGTGA+TGG - chr1_3:3749582-3749601 Msa0097910:intron 50.0%
!! ATACTGCTGGTGATGGGAGA+AGG - chr1_3:3749589-3749608 Msa0097910:intron 50.0%
!! CTGGTGATGGGAGAAGGTAT+TGG - chr1_3:3749595-3749614 Msa0097910:intron 50.0%
!! GGAGTTGATGTCACCTCTTG+AGG - chr1_3:3749817-3749836 Msa0097910:intron 50.0%
TATGGTCACTGTGAAGGCTG+GGG - chr1_3:3750069-3750088 Msa0097910:intron 50.0%
GGGTTGCACTTTCTCAAGTC+AGG - chr1_3:3750089-3750108 Msa0097910:intron 50.0%
GGGCTGATGCATCAACTGTT+TGG - chr1_3:3750589-3750608 Msa0097910:intron 50.0%
! AGTTGATGTTGCAGCAGAGG+AGG + chr1_3:3750983-3751002 None:intergenic 50.0%
!! TGGAGTTGATGTTGCAGCAG+AGG + chr1_3:3750986-3751005 None:intergenic 50.0%
TTGGAGCTAGCTGCATTAGC+TGG + chr1_3:3751009-3751028 None:intergenic 50.0%
GGGCTTGAAGCAAGACCATT+AGG + chr1_3:3751042-3751061 None:intergenic 50.0%
! AGTGCTTGGTTCGACTCCTA+TGG + chr1_3:3751160-3751179 None:intergenic 50.0%
AAGCTTCCTGCAACTGCTGT+AGG + chr1_3:3751204-3751223 None:intergenic 50.0%
ACAGCAGTTGCAGGAAGCTT+AGG - chr1_3:3751204-3751223 Msa0097910:intron 50.0%
GAACCATGCAGCCATGGATA+AGG - chr1_3:3751766-3751785 Msa0097910:intron 50.0%
! AAGCCTTATCCATGGCTGCA+TGG + chr1_3:3751772-3751791 None:intergenic 50.0%
GGCTTCCTACAAGAGTTGCA+AGG + chr1_3:3751821-3751840 None:intergenic 50.0%
TTCTGATTGGACGTGGGAAC+AGG - chr1_3:3752096-3752115 Msa0097910:intron 50.0%
CTTTCAACGAGGTGAGAGTC+AGG - chr1_3:3752263-3752282 Msa0097910:intron 50.0%
GTGAGAGTCAGGCCTCATAT+GGG - chr1_3:3752274-3752293 Msa0097910:intron 50.0%
! CAGCCGCATACCGTTTTATC+TGG - chr1_3:3752353-3752372 Msa0097910:intron 50.0%
GGGTCAAAGGAAGAAGCTAG+AGG - chr1_3:3752416-3752435 Msa0097910:intron 50.0%
CAAGATTGCACACGAAGTCG+TGG + chr1_3:3753337-3753356 None:intergenic 50.0%
CGACTTCGTGTGCAATCTTG+TGG - chr1_3:3753337-3753356 Msa0097910:intron 50.0%
!! CTGGTCTTATGCTGACTTGC+TGG - chr1_3:3753678-3753697 Msa0097910:intron 50.0%
ACGAGGCTTGATTGTTCCCA+TGG - chr1_3:3754012-3754031 Msa0097910:intron 50.0%
GGCTTGATTGTTCCCATGGA+TGG - chr1_3:3754016-3754035 Msa0097910:intron 50.0%
!! TGTTGACTTGCTGCTCGATG+GGG + chr1_3:3754245-3754264 None:intergenic 50.0%
!! GTTGTTGACTTGCTGCTCGA+TGG + chr1_3:3754247-3754266 None:intergenic 50.0%
CAGCCACCATAGAAACTTCG+AGG + chr1_3:3754792-3754811 None:intergenic 50.0%
!! TGACCGCTTGCTTGTTTTCC+AGG - chr1_3:3755312-3755331 Msa0097910:intron 50.0%
CACCACTATTGCAGTGGTAG+CGG - chr1_3:3755846-3755865 Msa0097910:CDS 50.0%
!! TTTTCTGTGATTGGCCGCGT+CGG + chr1_3:3756120-3756139 None:intergenic 50.0%
!! AAAGGTGCGGTGGTGGAAAA+TGG + chr1_3:3756202-3756221 None:intergenic 50.0%
GAAGAAGGGAAGGAAGCAGA+CGG + chr1_3:3756235-3756254 None:intergenic 50.0%
CTGCTTCCTTCCCTTCTTCT+TGG - chr1_3:3756236-3756255 Msa0097910:intron 50.0%
AGTCACAAAACGTGTGGTGG+TGG + chr1_3:3756347-3756366 None:intergenic 50.0%
AAAAACCCAGGACACGGACA+CGG + chr1_3:3756699-3756718 None:intergenic 50.0%
! TGACTTGGAGAAGGAGGAAG+AGG - chr1_3:3756982-3757001 Msa0097910:intron 50.0%
GATATAGGAACGAGTCCGTC+GGG - chr1_3:3757098-3757117 Msa0097910:CDS 50.0%
ATATAGGAACGAGTCCGTCG+GGG - chr1_3:3757099-3757118 Msa0097910:CDS 50.0%
! GGTTTTTCCTTTCACCCCGA+CGG + chr1_3:3757116-3757135 None:intergenic 50.0%
GCTACGGTGATCTACTCGAA+TGG + chr1_3:3758036-3758055 None:intergenic 50.0%
TGAAGAGGTTGTCAGCCAGT+TGG - chr1_3:3758888-3758907 Msa0097910:intron 50.0%
AGAGAGAGCTAAGGAGAAGG+AGG - chr1_3:3759002-3759021 Msa0097910:intron 50.0%
ACTCAGTGGGGTGAATGAGT+TGG - chr1_3:3759677-3759696 Msa0097910:CDS 50.0%
CAAGACATGACTGACAGCCA+TGG - chr1_3:3759972-3759991 Msa0097910:intron 50.0%
! AAGGCATCAGAGCAGTATGG+AGG - chr1_3:3760046-3760065 Msa0097910:intron 50.0%
TCAGAGCAGTATGGAGGATG+TGG - chr1_3:3760052-3760071 Msa0097910:intron 50.0%
GAAGTGACCGCAAGAAGTCT+AGG - chr1_3:3760123-3760142 Msa0097910:intron 50.0%
TGACCGCAAGAAGTCTAGGA+AGG - chr1_3:3760127-3760146 Msa0097910:intron 50.0%
AAAGACACAAGAGGGACCAC+GGG - chr1_3:3760285-3760304 Msa0097910:intron 50.0%
CTCATTCCATCCAGTTCTCC+TGG + chr1_3:3760318-3760337 None:intergenic 50.0%
CAGGAGAACTGGATGGAATG+AGG - chr1_3:3760316-3760335 Msa0097910:intron 50.0%
TCCGACCATACCACACGTCA+AGG - chr1_3:3746305-3746324 Msa0097910:three_prime_UTR 55.0%
CCCTTGACGTGTGGTATGGT+CGG + chr1_3:3746309-3746328 None:intergenic 55.0%
CCGACCATACCACACGTCAA+GGG - chr1_3:3746306-3746325 Msa0097910:three_prime_UTR 55.0%
ACCACACGTCAAGGGATTCC+AGG - chr1_3:3746314-3746333 Msa0097910:three_prime_UTR 55.0%
CCACACGTCAAGGGATTCCA+GGG - chr1_3:3746315-3746334 Msa0097910:three_prime_UTR 55.0%
! TCAAAACAGTGGCGGAGCCA+GGG + chr1_3:3746408-3746427 None:intergenic 55.0%
! ATCAAAACAGTGGCGGAGCC+AGG + chr1_3:3746409-3746428 None:intergenic 55.0%
GTCGGGATGCCTGCTATTCA+AGG - chr1_3:3747106-3747125 Msa0097910:intron 55.0%
!! TGAGGAGGTGCTCCAGAAAC+AGG + chr1_3:3747316-3747335 None:intergenic 55.0%
TGAGGCGGATGCTGGTATTG+GGG + chr1_3:3747482-3747501 None:intergenic 55.0%
! CATGCATTTGAGGCGGATGC+TGG + chr1_3:3747490-3747509 None:intergenic 55.0%
! GGAGGTGCATGCATTTGAGG+CGG + chr1_3:3747497-3747516 None:intergenic 55.0%
! GCAGGAGGTGCATGCATTTG+AGG + chr1_3:3747500-3747519 None:intergenic 55.0%
CAAATGCATGCACCTCCTGC+CGG - chr1_3:3747500-3747519 Msa0097910:CDS 55.0%
TGAGGACGACCAAGGTTGTC+CGG + chr1_3:3747522-3747541 None:intergenic 55.0%
!! TGAGGTACTGAGGACGACCA+AGG + chr1_3:3747530-3747549 None:intergenic 55.0%
!! TGCAGCACTCTGAGGTACTG+AGG + chr1_3:3747540-3747559 None:intergenic 55.0%
GTTACAGCTGCAGCACTCTG+AGG + chr1_3:3747548-3747567 None:intergenic 55.0%
CCGGCTGGAGTTCAATCATC+TGG - chr1_3:3747578-3747597 Msa0097910:intron 55.0%
AGGCATGTTTGGGTCAGAGG+AGG - chr1_3:3748464-3748483 Msa0097910:intron 55.0%
GCGTTGCACAAAGAGAGGGT+CGG - chr1_3:3748562-3748581 Msa0097910:intron 55.0%
ATCTGCTCACTCCCTCACTC+AGG + chr1_3:3748613-3748632 None:intergenic 55.0%
GAGTGAGGGAGTGAGCAGAT+AGG - chr1_3:3748613-3748632 Msa0097910:intron 55.0%
ATGCGATCGCACCTTGTCCT+GGG - chr1_3:3748774-3748793 Msa0097910:intron 55.0%
TTCTCACTGTGCTCAACCCC+AGG + chr1_3:3748794-3748813 None:intergenic 55.0%
TCAGGTATGCAGCTGCAGGT+TGG - chr1_3:3748937-3748956 Msa0097910:intron 55.0%
TTGTGGGTTCTCCCAACTCG+TGG - chr1_3:3748976-3748995 Msa0097910:intron 55.0%
!! TGTTTTGCCCAAGGGGTGTG+AGG - chr1_3:3749120-3749139 Msa0097910:intron 55.0%
GGCAACCCTCACCTTTAAGC+CGG + chr1_3:3749362-3749381 None:intergenic 55.0%
ATCAGCCCTCTGTCACATCC+AGG + chr1_3:3750577-3750596 Msa0097920:CDS 55.0%
GAGCTAGCTGCATTAGCTGG+TGG + chr1_3:3751006-3751025 None:intergenic 55.0%
ACTGCACCTACAGCAGTTGC+AGG - chr1_3:3751195-3751214 Msa0097910:intron 55.0%
ACGTGGGAACAGGTAAGACG+AGG - chr1_3:3752106-3752125 Msa0097910:intron 55.0%
GGTGAGAGTCAGGCCTCATA+TGG - chr1_3:3752273-3752292 Msa0097910:intron 55.0%
!! ATTTTGTTGGTGGGGGCAGG+TGG - chr1_3:3753001-3753020 Msa0097910:intron 55.0%
!! TTTTGTTGGTGGGGGCAGGT+GGG - chr1_3:3753002-3753021 Msa0097910:intron 55.0%
GCACACGAAGTCGTGGATCT+TGG + chr1_3:3753330-3753349 None:intergenic 55.0%
TTGTAGTCCAGGTCGCACCT+AGG - chr1_3:3754490-3754509 Msa0097910:intron 55.0%
TGTAGTCCAGGTCGCACCTA+GGG - chr1_3:3754491-3754510 Msa0097910:intron 55.0%
GCAGCCTGGCACCACATATT+GGG - chr1_3:3754891-3754910 Msa0097910:intron 55.0%
CAGCCTGGCACCACATATTG+GGG - chr1_3:3754892-3754911 Msa0097910:intron 55.0%
GAGAGAAGATGGAGAGGCAG+AGG - chr1_3:3755645-3755664 Msa0097910:intron 55.0%
GTCCGCTACCACTGCAATAG+TGG + chr1_3:3755851-3755870 None:intergenic 55.0%
GCGGTATAGCAGCGCTATAG+CGG - chr1_3:3755925-3755944 Msa0097910:CDS 55.0%
ACACGGATCCGACATTGCTC+TGG - chr1_3:3756088-3756107 Msa0097910:intron 55.0%
TGCTCTGGTGTAAACCGACG+CGG - chr1_3:3756103-3756122 Msa0097910:CDS 55.0%
! TTCCACCACCGCACCTTTTC+CGG - chr1_3:3756204-3756223 Msa0097910:intron 55.0%
CAGAGGAACAGAAACGGCGA+TGG + chr1_3:3756291-3756310 None:intergenic 55.0%
ATATTGCCGTGTCCGTGTCC+TGG - chr1_3:3756690-3756709 Msa0097910:intron 55.0%
TATTGCCGTGTCCGTGTCCT+GGG - chr1_3:3756691-3756710 Msa0097910:intron 55.0%
ATGAAGCACGGACTCGGACA+CGG + chr1_3:3756762-3756781 None:intergenic 55.0%
TGTCCGAGTCCGTGCTTCAT+AGG - chr1_3:3756762-3756781 Msa0097910:intron 55.0%
TCGAATGGAAAGGGAGGCTG+GGG + chr1_3:3758021-3758040 None:intergenic 55.0%
CTCGAATGGAAAGGGAGGCT+GGG + chr1_3:3758022-3758041 None:intergenic 55.0%
ACTCGAATGGAAAGGGAGGC+TGG + chr1_3:3758023-3758042 None:intergenic 55.0%
GCACGCTACACAACCTGTAC+AGG + chr1_3:3759747-3759766 None:intergenic 55.0%
GTTGTGTAGCGTGCATGACC+AGG - chr1_3:3759753-3759772 Msa0097910:CDS 55.0%
AAGACACAAGAGGGACCACG+GGG - chr1_3:3760286-3760305 Msa0097910:intron 55.0%
ACGGTTCCAGGAGAACTGGA+TGG - chr1_3:3760309-3760328 Msa0097910:intron 55.0%
GAGCTTGAAGATGGGGAGCT+TGG - chr1_3:3760338-3760357 Msa0097910:intron 55.0%
CCCTGGAATCCCTTGACGTG+TGG + chr1_3:3746318-3746337 None:intergenic 60.0%
! AAAACAGTGGCGGAGCCAGG+GGG + chr1_3:3746406-3746425 None:intergenic 60.0%
! CAAAACAGTGGCGGAGCCAG+GGG + chr1_3:3746407-3746426 None:intergenic 60.0%
GTAACGTCTGTACAGCCGGC+TGG - chr1_3:3747563-3747582 Msa0097910:intron 60.0%
GATGCGATCGCACCTTGTCC+TGG - chr1_3:3748773-3748792 Msa0097910:intron 60.0%
TGCGATCGCACCTTGTCCTG+GGG - chr1_3:3748775-3748794 Msa0097910:intron 60.0%
CTGTGCTCAACCCCAGGACA+AGG + chr1_3:3748788-3748807 None:intergenic 60.0%
CTGCTCACGGGCCAACTGAA+CGG + chr1_3:3750899-3750918 None:intergenic 60.0%
AGCAGAGGAGGCAGCAGCAT+TGG + chr1_3:3750971-3750990 None:intergenic 60.0%
! TTTGTTGGTGGGGGCAGGTG+GGG - chr1_3:3753003-3753022 Msa0097910:intron 60.0%
AAGCTACCCTAGGTGCGACC+TGG + chr1_3:3754500-3754519 None:intergenic 60.0%
GGTCGGGGTGTGAATGTGCA+GGG - chr1_3:3754621-3754640 Msa0097910:intron 60.0%
GAGTGAACATCAGGGCAGCC+TGG - chr1_3:3754877-3754896 Msa0097910:intron 60.0%
GGCAGCCTGGCACCACATAT+TGG - chr1_3:3754890-3754909 Msa0097910:intron 60.0%
CCACCCCAATATGTGGTGCC+AGG + chr1_3:3754898-3754917 None:intergenic 60.0%
CCTGGCACCACATATTGGGG+TGG - chr1_3:3754895-3754914 Msa0097910:intron 60.0%
ATGCTGCTGAGGAACACCGG+CGG - chr1_3:3755072-3755091 Msa0097910:intron 60.0%
TTCCGACACGGACGCGCTTA+CGG - chr1_3:3755996-3756015 Msa0097910:intron 60.0%
CGTACGATTCGCGTCAGACG+CGG - chr1_3:3756023-3756042 Msa0097910:intron 60.0%
GAAGGGAAGGAAGCAGACGG+CGG + chr1_3:3756232-3756251 None:intergenic 60.0%
CCGCCTATGAAGCACGGACT+CGG + chr1_3:3756768-3756787 None:intergenic 60.0%
CCGAGTCCGTGCTTCATAGG+CGG - chr1_3:3756765-3756784 Msa0097910:intron 60.0%
AACGAGTCCGTCGGGGTGAA+AGG - chr1_3:3757106-3757125 Msa0097910:CDS 60.0%
GAAAGGGAGGCTGGGGTTAG+CGG + chr1_3:3758014-3758033 None:intergenic 60.0%
GGAGCTTGGCGATGATGCAG+AGG - chr1_3:3760352-3760371 Msa0097910:intron 60.0%
CACCTCCTGCCGGACAACCT+TGG - chr1_3:3747510-3747529 Msa0097910:CDS 65.0%
GACCAAGGTTGTCCGGCAGG+AGG + chr1_3:3747515-3747534 None:intergenic 65.0%
GACGACCAAGGTTGTCCGGC+AGG + chr1_3:3747518-3747537 None:intergenic 65.0%
AACTTGAGGGAGGGCTCCGG+AGG - chr1_3:3748351-3748370 Msa0097910:intron 65.0%
ACTTGAGGGAGGGCTCCGGA+GGG - chr1_3:3748352-3748371 Msa0097910:intron 65.0%
CGTTCAGTTGGCCCGTGAGC+AGG - chr1_3:3750897-3750916 Msa0097910:intron 65.0%
GGGTCGGGGTGTGAATGTGC+AGG - chr1_3:3754620-3754639 Msa0097910:intron 65.0%
TGTCGGAACCGCGTCGGACA+CGG + chr1_3:3755984-3756003 None:intergenic 65.0%
TGTCCGACGCGGTTCCGACA+CGG - chr1_3:3755984-3756003 Msa0097910:CDS 65.0%
TGCCGTAAGCGCGTCCGTGT+CGG + chr1_3:3756001-3756020 None:intergenic 65.0%
CACGACACGGACACGGGACA+CGG + chr1_3:3756731-3756750 None:intergenic 65.0%
ACGGGACACGACACGGACAC+GGG + chr1_3:3756737-3756756 None:intergenic 65.0%
CACGGGACACGACACGGACA+CGG + chr1_3:3756738-3756757 None:intergenic 65.0%
CACGGACACGGGACACGACA+CGG + chr1_3:3756744-3756763 None:intergenic 65.0%
ACGGACTCGGACACGGACAC+GGG + chr1_3:3756755-3756774 None:intergenic 65.0%
CACGGACTCGGACACGGACA+CGG + chr1_3:3756756-3756775 None:intergenic 65.0%
CACAAGAGGGACCACGGGGA+CGG - chr1_3:3760290-3760309 Msa0097910:intron 65.0%
TTCTCCTGGAACCGTCCCCG+TGG + chr1_3:3760304-3760323 None:intergenic 65.0%
GGGGACGGTTCCAGGAGAAC+TGG - chr1_3:3760305-3760324 Msa0097910:intron 65.0%
GAGATCCGCCGTGTCCGACG+CGG - chr1_3:3755973-3755992 Msa0097910:CDS 70.0%
CGTCCGTGTCGGAACCGCGT+CGG + chr1_3:3755990-3756009 None:intergenic 70.0%
! CGCCGGAAAAGGTGCGGTGG+TGG + chr1_3:3756209-3756228 None:intergenic 70.0%
AAGGAAGCAGACGGCGGCGC+CGG + chr1_3:3756226-3756245 None:intergenic 70.0%
TGGCTCCCCTTGCCACCCCC+TGG - chr1_3:3746388-3746407 Msa0097910:three_prime_UTR 75.0%
CGGAGCCAGGGGGTGGCAAG+GGG + chr1_3:3746396-3746415 None:intergenic 75.0%
GCGGAGCCAGGGGGTGGCAA+GGG + chr1_3:3746397-3746416 None:intergenic 75.0%
! ACAGTGGCGGAGCCAGGGGG+TGG + chr1_3:3746403-3746422 None:intergenic 75.0%
CGGAACCGCGTCGGACACGG+CGG + chr1_3:3755981-3756000 None:intergenic 75.0%
! CGGCGCCGGAAAAGGTGCGG+TGG + chr1_3:3756212-3756231 None:intergenic 75.0%
! CGGCGGCGCCGGAAAAGGTG+CGG + chr1_3:3756215-3756234 None:intergenic 75.0%
! GCAGACGGCGGCGCCGGAAA+AGG + chr1_3:3756220-3756239 None:intergenic 75.0%
GGGACCACGGGGACGGTTCC+AGG - chr1_3:3760297-3760316 Msa0097910:intron 75.0%
! GGCGGAGCCAGGGGGTGGCA+AGG + chr1_3:3746398-3746417 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 3746195 3760716 3746195 ID=Msa0097910;Name=Msa0097910
chr1_3 mRNA 3746195 3760716 3746195 ID=Msa0097910-mRNA-1;Parent=Msa0097910;Name=Msa0097910-mRNA-1;_AED=0.19;_eAED=0.19;_QI=187|0.91|1|1|0.95|0.95|24|337|892
chr1_3 exon 3746195 3746666 3746195 ID=Msa0097910-mRNA-1:exon:1220;Parent=Msa0097910-mRNA-1
chr1_3 exon 3746763 3747068 3746763 ID=Msa0097910-mRNA-1:exon:1219;Parent=Msa0097910-mRNA-1
chr1_3 exon 3747455 3747557 3747455 ID=Msa0097910-mRNA-1:exon:1218;Parent=Msa0097910-mRNA-1
chr1_3 exon 3747666 3747730 3747666 ID=Msa0097910-mRNA-1:exon:1217;Parent=Msa0097910-mRNA-1
chr1_3 exon 3747822 3747929 3747822 ID=Msa0097910-mRNA-1:exon:1216;Parent=Msa0097910-mRNA-1
chr1_3 exon 3749492 3749590 3749492 ID=Msa0097910-mRNA-1:exon:1215;Parent=Msa0097910-mRNA-1
chr1_3 exon 3749690 3749806 3749690 ID=Msa0097910-mRNA-1:exon:1214;Parent=Msa0097910-mRNA-1
chr1_3 exon 3749887 3749940 3749887 ID=Msa0097910-mRNA-1:exon:1213;Parent=Msa0097910-mRNA-1
chr1_3 exon 3751769 3751849 3751769 ID=Msa0097910-mRNA-1:exon:1212;Parent=Msa0097910-mRNA-1
chr1_3 exon 3754071 3754176 3754071 ID=Msa0097910-mRNA-1:exon:1211;Parent=Msa0097910-mRNA-1
chr1_3 exon 3754275 3754309 3754275 ID=Msa0097910-mRNA-1:exon:1210;Parent=Msa0097910-mRNA-1
chr1_3 exon 3754414 3754500 3754414 ID=Msa0097910-mRNA-1:exon:1209;Parent=Msa0097910-mRNA-1
chr1_3 exon 3754638 3754715 3754638 ID=Msa0097910-mRNA-1:exon:1208;Parent=Msa0097910-mRNA-1
chr1_3 exon 3754794 3754862 3754794 ID=Msa0097910-mRNA-1:exon:1207;Parent=Msa0097910-mRNA-1
chr1_3 exon 3754978 3755076 3754978 ID=Msa0097910-mRNA-1:exon:1206;Parent=Msa0097910-mRNA-1
chr1_3 exon 3755472 3755535 3755472 ID=Msa0097910-mRNA-1:exon:1205;Parent=Msa0097910-mRNA-1
chr1_3 exon 3755646 3756007 3755646 ID=Msa0097910-mRNA-1:exon:1204;Parent=Msa0097910-mRNA-1
chr1_3 exon 3756092 3756149 3756092 ID=Msa0097910-mRNA-1:exon:1203;Parent=Msa0097910-mRNA-1
chr1_3 exon 3756271 3756323 3756271 ID=Msa0097910-mRNA-1:exon:1202;Parent=Msa0097910-mRNA-1
chr1_3 exon 3757073 3757142 3757073 ID=Msa0097910-mRNA-1:exon:1201;Parent=Msa0097910-mRNA-1
chr1_3 exon 3757301 3757368 3757301 ID=Msa0097910-mRNA-1:exon:1200;Parent=Msa0097910-mRNA-1
chr1_3 exon 3759292 3759459 3759292 ID=Msa0097910-mRNA-1:exon:1199;Parent=Msa0097910-mRNA-1
chr1_3 exon 3759563 3759901 3759563 ID=Msa0097910-mRNA-1:exon:1198;Parent=Msa0097910-mRNA-1
chr1_3 exon 3760575 3760716 3760575 ID=Msa0097910-mRNA-1:exon:1197;Parent=Msa0097910-mRNA-1
chr1_3 five_prime_UTR 3760575 3760716 3760575 ID=Msa0097910-mRNA-1:five_prime_utr;Parent=Msa0097910-mRNA-1
chr1_3 five_prime_UTR 3759857 3759901 3759857 ID=Msa0097910-mRNA-1:five_prime_utr;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3759563 3759856 3759563 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3759292 3759459 3759292 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3757301 3757368 3757301 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3757073 3757142 3757073 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3756271 3756323 3756271 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3756092 3756149 3756092 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3755646 3756007 3755646 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3755472 3755535 3755472 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3754978 3755076 3754978 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3754794 3754862 3754794 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3754638 3754715 3754638 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3754414 3754500 3754414 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3754275 3754309 3754275 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3754071 3754176 3754071 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3751769 3751849 3751769 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3749887 3749940 3749887 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3749690 3749806 3749690 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3749492 3749590 3749492 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3747822 3747929 3747822 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3747666 3747730 3747666 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3747455 3747557 3747455 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3746763 3747068 3746763 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 CDS 3746532 3746666 3746532 ID=Msa0097910-mRNA-1:cds;Parent=Msa0097910-mRNA-1
chr1_3 three_prime_UTR 3746195 3746531 3746195 ID=Msa0097910-mRNA-1:three_prime_utr;Parent=Msa0097910-mRNA-1
Gene Sequence

>Msa0097910

ATGACTTCACAACAATTCGGACATGCAGGGCATGCCGTTCCTTCATCTAATGTCGGGATGCCTGCTATTCAAGGTCAGCAATTGCAGTATTCTCAACAAATGCAACAGTTGGCTCCAAGACAAATTCAGCCCGGTCATCCTGTTTCATCATCACAGGGTATACCTATGCCATATATTCAAACAAACAGGCCACTGACATCTGTTCCACAACATGCACAGCAAGCTGTTCCTCACATAAACAATCATATGCATGGCTTGCCTGTTTCTGGAGCACCTCCTCAATCTCTATACACTTTCACACCATCTTATGGTCAGGCATTGCCCCAATACCAGCATCCGCCTCAAATGCATGCACCTCCTGCCGGACAACCTTGGTCGTCCTCAGTACCTCAGAGTGCTGCAGCTGTAACGTCTGTACAGCCGGCTGGAGTTCAATCATCTGGTACTGCATCAAATGATGCTGCAACTAATACCACTAGCAACAGCTCTGCATCTGATTGGCAAGAGCATACTGCTGGTGATGGGAGAAGATATTACTACAACAAGAGTACAAGGCAATCTAGTTGGGAAAAACCTTTGGAGTTGATGTCACCTCTTGAGAGGGCTGATGCATCAACTGTTTGGAAAGAGTTCACTTCTTCAGAGGGAAGAAAGTATTATTACAACAAGGTTACTCAGCAATCAGTATGGACAATACCAGAAGAACTCAAGTTGGCCCGTGAGCAGGCACATAAAACTATTAGCCAGGGAATGGTGTCAGAAACAAGTGATACATCCAATGCTGCTGCCTCCTCTGCTGCAACATCAACTCCACCAGCTAATGCAGCTAGCTCCAACACTTTGAGACCTAATGGTCTTGCTTCAAGCCCATCTTCTGTTACACCAGTTGTTGCCACTGATAATCAACGACCAGTTTCTGGATTATCAGTGGTCTCTGTTTCCCATTCTGTCGTTACTTCAAGCACCATAGGAGTCGAACCAAGCACTGTTGTAACTGTGAGCACTGCACCTACAGCAGTTGCAGGAAGCTTAGGAGTAGTAGCCAACTCACTTGATTCAAAAATTCCATCCATTGTTGAAAATCAAGTAACTCACGATTCTACTTCTGTCAATGGAGCACCTCTTCAAGATATGGAGGAAGCCAAAAAAGGAGTTCCTGTGGTTGGACAAACTAATGTGACTCCTTCAGAGGAGAAAACCAATGATGGTGAAACTTTGGTATATGCAAATAAGCTGGAAGCAAAAAATGCATTTAAAGCGCTTTTGGAATCTGTGAATGTTCATTCTGATTGGACGTGGGAACAGGCAATGAGAGAAATCATCAATGATAAAAGATATAATGCCCTGAAAACACTTGGTGAGCGAAAACAAGCTTTCAACGAGTATTTGGGTCAAAGGAAGAAGCTAGAGGCTGAAGAAAGGCGTATAAAGCAGAAAAAAGCCCGCGAAGAATTCACAAAGATGTTAGAAGAGTGCAAGGAGCTAACATCATCCACAAGATGGAGCAAAGCTATAAGTATGCTTGAAAATGATGAACGATTCAATGCTGTTGAAAGAGTAAGAGATCGGGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGAAAGGAAAAGGAAAATGCTGCTGAGGAACACCGGCGGAATTTAGCAGAATATAGGAAATTTCTGGAGTCCTGTGATTTTGTGAAGGACTATATTCGTGACTTGGAGAAGGAGGAAGAGGAACAAAAAAGGATACAGAAGGAACGAGTCCGTCGGGGTGAAAGGAAAAACCGTGATGCATTTCGCAAGTTGCTAGAAGAACATATTGCTGATGGAGTTCTTACTGCTAAAACACAGTGGCGAGATTATTGCTTGAAGGTGAAAGAGTTGCCTCAATATCAAGCTGTTGCATCAAATACATCCGGTTCTACTCCAAAAGATTTATTTGAGGATGTCTTTGAAAATCTTGAAAAGCAGCTTTTATTTGAAGAGTTATTAGAGAGAGCTAAGGAGAAGGAGGAGAAAGAAGCTAAGAAACGCCAACGCCTTGCTGATGACTTTACTAACTTATTATATACACTCAAGGATATTATTACTTCTTCAACATGGGAGGAATGCAAGGCACTTTTTGAGGACACACAAGAATACATTTCAATTGGAGATGAAAGCTATAGTAAAGAAATTTTTGAGGAATACATTACATACTTGAAGGAAAAAGCTAAAGAGAAGGAACGTAAGCGTGAAGAAGAAAAGGCCAAAAAGGAGAAAGAAAGAGAAGAGAAAGAAAAACGTAAAGAGAAGGAGAAAAAAGAGAAGGAAAGAGAACGTGAGAAAGAAAAATCAAAAGAACGACATAAGAAAGATGAATCAGATAGTGATAATCAAGACATGACTGACAGCCATGGTTATAGAGAGGAGAAGAAAAAAGAAAAGGATAAAGAGAGAAAACATCGAAGAAGGCATCAGAGCAGTATGGAGGATGTGGATTCTGAAAAAGATGAGAAGGAAGAGTCTAGAAAATCGCGAAGACATGGAAGTGACCGCAAGAAGTCTAGGAAGCATGCAAACTCTCCTGAGTCAGACAATGAAGGTAGGCATAAAAGACACAAGAGGGACCACGGGGACGGTTCCAGGAGAACTGGATGGAATGAGGAGCTTGAAGATGGGGAGCTTGGCGATGATGCAGAGGTTTAG
Protein sequence

>Msa0097910

MTSQQFGHAGHAVPSSNVGMPAIQGQQLQYSQQMQQLAPRQIQPGHPVSSSQGIPMPYIQTNRPLTSVPQHAQQAVPHINNHMHGLPVSGAPPQSLYTFTPSYGQALPQYQHPPQMHAPPAGQPWSSSVPQSAAAVTSVQPAGVQSSGTASNDAATNTTSNSSASDWQEHTAGDGRRYYYNKSTRQSSWEKPLELMSPLERADASTVWKEFTSSEGRKYYYNKVTQQSVWTIPEELKLAREQAHKTISQGMVSETSDTSNAAASSAATSTPPANAASSNTLRPNGLASSPSSVTPVVATDNQRPVSGLSVVSVSHSVVTSSTIGVEPSTVVTVSTAPTAVAGSLGVVANSLDSKIPSIVENQVTHDSTSVNGAPLQDMEEAKKGVPVVGQTNVTPSEEKTNDGETLVYANKLEAKNAFKALLESVNVHSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRIKQKKAREEFTKMLEECKELTSSTRWSKAISMLENDERFNAVERVRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLESCDFVKDYIRDLEKEEEEQKRIQKERVRRGERKNRDAFRKLLEEHIADGVLTAKTQWRDYCLKVKELPQYQAVASNTSGSTPKDLFEDVFENLEKQLLFEELLERAKEKEEKEAKKRQRLADDFTNLLYTLKDIITSSTWEECKALFEDTQEYISIGDESYSKEIFEEYITYLKEKAKEKERKREEEKAKKEKEREEKEKRKEKEKKEKEREREKEKSKERHKKDESDSDNQDMTDSHGYREEKKKEKDKERKHRRRHQSSMEDVDSEKDEKEESRKSRRHGSDRKKSRKHANSPESDNEGRHKRHKRDHGDGSRRTGWNEELEDGELGDDAEV*