AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1398140


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1398140 MtrunA17_Chr7g0259291 95.517 580 25 1 1 579 1 580 0.0 1151
Msa1398140 MtrunA17_Chr7g0259401 85.766 274 12 2 132 404 2 249 2.07e-169 481
Msa1398140 MtrunA17_Chr7g0275471 35.140 572 338 14 5 564 11 561 1.26e-96 306
Msa1398140 MtrunA17_Chr8g0347381 33.101 574 350 14 5 567 11 561 6.54e-91 291
Msa1398140 MtrunA17_Chr8g0347421 33.857 573 347 15 5 567 11 561 5.90e-90 288
Msa1398140 MtrunA17_Chr5g0421331 31.119 572 364 12 4 568 19 567 1.24e-85 277
Msa1398140 MtrunA17_Chr8g0347391 32.112 573 357 13 5 567 18 568 1.39e-85 277
Msa1398140 MtrunA17_Chr2g0318991 30.887 586 354 13 11 568 20 582 7.94e-83 271
Msa1398140 MtrunA17_Chr5g0401641 29.983 577 373 11 5 568 21 579 1.67e-80 264
Msa1398140 MtrunA17_Chr8g0361551 30.189 583 371 13 4 567 14 579 2.36e-78 259
Msa1398140 MtrunA17_Chr4g0023301 31.070 486 313 9 91 567 9 481 9.48e-78 254
Msa1398140 MtrunA17_Chr1g0195771 30.000 570 372 11 5 558 54 612 3.53e-77 256
Msa1398140 MtrunA17_Chr4g0022401 31.540 409 256 11 5 396 19 420 3.67e-66 222
Msa1398140 MtrunA17_Chr8g0347431 33.508 382 232 8 183 558 11 376 4.44e-64 215
Msa1398140 MtrunA17_Chr5g0401631 32.713 376 234 6 197 568 1 361 2.93e-62 210
Msa1398140 MtrunA17_Chr8g0352391 28.763 299 150 7 265 558 7 247 1.69e-26 108
Msa1398140 MtrunA17_Chr1g0169871 37.209 172 99 3 315 481 138 305 7.29e-26 108
Msa1398140 MtrunA17_Chr8g0352401 35.714 126 77 2 5 130 2 123 1.15e-18 82.4
Msa1398140 MtrunA17_Chr4g0022391 29.730 185 108 6 397 574 11 180 1.00e-15 75.9
Msa1398140 MtrunA17_Chr8g0347441 39.048 105 62 1 5 109 11 113 1.06e-15 73.9
Msa1398140 MtrunA17_Chr5g0401621 29.730 148 98 3 11 158 27 168 8.88e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1398140 AT1G28130.1 30.756 582 374 10 8 568 14 587 2.39e-93 298
Msa1398140 AT1G59500.1 31.763 573 369 12 3 568 19 576 8.17e-93 297
Msa1398140 AT1G48660.1 32.642 579 355 12 8 574 7 562 1.27e-90 290
Msa1398140 AT1G23160.1 32.348 575 356 13 8 569 15 569 2.40e-90 290
Msa1398140 AT1G48660.2 32.586 580 357 13 8 574 7 565 2.67e-90 290
Msa1398140 AT5G13320.3 31.754 570 362 11 9 568 13 565 1.81e-89 288
Msa1398140 AT5G13320.1 31.754 570 362 11 9 568 13 565 1.81e-89 288
Msa1398140 AT5G13320.2 32.281 570 359 12 9 568 28 580 4.00e-89 287
Msa1398140 AT4G37390.1 31.034 580 368 13 4 568 20 582 2.58e-86 280
Msa1398140 AT5G13360.1 31.826 575 354 12 11 568 17 570 9.78e-86 278
Msa1398140 AT5G13360.2 31.826 575 354 12 11 568 17 570 9.78e-86 278
Msa1398140 AT2G23170.1 30.716 573 372 12 4 568 19 574 2.56e-85 277
Msa1398140 AT5G13360.3 31.826 575 354 12 11 568 95 648 6.16e-85 278
Msa1398140 AT4G03400.2 31.313 594 366 14 5 574 9 584 2.13e-84 275
Msa1398140 AT4G03400.1 31.313 594 366 14 5 574 9 584 2.13e-84 275
Msa1398140 AT5G13370.1 31.699 571 361 11 11 568 17 571 5.87e-84 273
Msa1398140 AT2G46370.1 32.465 576 352 17 5 567 11 562 6.70e-84 273
Msa1398140 AT2G46370.2 32.465 576 352 17 5 567 11 562 6.70e-84 273
Msa1398140 AT5G51470.1 32.099 567 358 12 11 569 16 563 8.82e-84 273
Msa1398140 AT2G46370.4 32.465 576 352 17 5 567 22 573 9.65e-84 273
Msa1398140 AT2G14960.1 30.435 575 365 12 4 568 19 568 2.00e-83 272
Msa1398140 AT4G27260.1 31.779 579 359 13 8 567 25 586 5.77e-82 269
Msa1398140 AT5G13350.1 31.173 571 364 12 11 568 17 571 2.29e-81 266
Msa1398140 AT5G13350.2 31.173 571 364 12 11 568 17 571 2.29e-81 266
Msa1398140 AT5G54510.1 30.743 579 365 12 8 567 25 586 1.26e-80 265
Msa1398140 AT2G47750.1 31.588 573 355 16 5 561 9 560 4.19e-78 258
Msa1398140 AT5G13380.1 31.107 569 366 12 11 568 47 600 3.17e-77 256
Msa1398140 AT1G28130.2 32.266 406 254 5 181 568 42 444 7.47e-74 243
Msa1398140 AT1G48670.1 29.879 579 336 12 1 574 1 514 8.46e-73 242
Msa1398140 AT2G46370.3 32.347 507 308 15 72 567 1 483 2.40e-72 240
Msa1398140 AT5G51470.2 31.902 489 309 10 89 569 1 473 1.44e-71 238
Msa1398140 AT1G48670.2 33.666 401 250 6 179 574 14 403 1.11e-70 233

Find 121 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAAAGCTGCCTCCTTTCT+TGG 0.216718 tig0022246:-4756 Msa1398140:CDS
TACAACTAAACGCGGCTTAA+AGG 0.223574 tig0022246:-4533 Msa1398140:CDS
TCATGATTCCTTATAATCTT+TGG 0.243867 tig0022246:+3326 None:intergenic
CTCTTCTCTGCTTCTTCTAT+AGG 0.284728 tig0022246:-5099 Msa1398140:intron
TTTCGATCAGTTATCAGATT+TGG 0.291888 tig0022246:-3387 Msa1398140:CDS
AGTCCCCTGGAAGTTATAAT+TGG 0.292019 tig0022246:-4442 Msa1398140:CDS
CGCTCAATCCTTCAACATAA+TGG 0.298742 tig0022246:-5280 Msa1398140:CDS
TGTTGAGTTTGCAAGTTTCT+TGG 0.299538 tig0022246:-3612 Msa1398140:CDS
TCCTCTCTTGAGAATGGTTT+AGG 0.317132 tig0022246:-3482 Msa1398140:CDS
TCAAAGTAAGGGATCAGTTT+TGG 0.319994 tig0022246:+4789 None:intergenic
AGTTTGTGAAGGTAAGAATT+GGG 0.327806 tig0022246:-4164 Msa1398140:CDS
ATAAGCCACCAAAGATTATA+AGG 0.328611 tig0022246:-3334 Msa1398140:CDS
TCATGAAGTTGTCAAGTTCT+TGG 0.335217 tig0022246:-3309 Msa1398140:CDS
CATAGGGTCTTGTTTACATT+TGG 0.339542 tig0022246:+4583 None:intergenic
GTCTTGTTTACATTTGGCCT+TGG 0.347840 tig0022246:+4589 None:intergenic
ATAAATACCTTCAACTGCTT+TGG 0.348086 tig0022246:+3575 None:intergenic
TAGATCCAATTATAACTTCC+AGG 0.355197 tig0022246:+4437 None:intergenic
AGGAATCTTGATGTTATAGA+TGG 0.357105 tig0022246:-4373 Msa1398140:CDS
TACAAGGTGCAGAGAGAAAA+AGG 0.360703 tig0022246:-3452 Msa1398140:CDS
GGCGATATAGTTAGAGTTGT+TGG 0.370089 tig0022246:-3782 Msa1398140:CDS
GAAAGGCTTGAATCAAAGTA+AGG 0.381997 tig0022246:+4777 None:intergenic
GTTTGCAAGTTTCTTGGATC+AGG 0.392810 tig0022246:-3606 Msa1398140:CDS
TCATCTGAAATTTCATGACT+TGG 0.392995 tig0022246:+4256 None:intergenic
GCCACCTTCTCTGTGGCCTT+AGG 0.400497 tig0022246:-4393 Msa1398140:CDS
TAGTTTGTGAAGGTAAGAAT+TGG 0.402669 tig0022246:-4165 Msa1398140:CDS
TCATTCTCATTCATCTCAAA+TGG 0.405812 tig0022246:+3911 None:intergenic
TCTTCATACTCTTTACAAAC+TGG 0.413261 tig0022246:-4499 Msa1398140:CDS
TACACATAGCTGCTCCCATT+TGG 0.419597 tig0022246:+4297 None:intergenic
CATGTTCTCCATCAGCCATC+TGG 0.419650 tig0022246:+5149 None:intergenic
TGTATTTCCTCTCTTGAGAA+TGG 0.427898 tig0022246:-3488 Msa1398140:CDS
TAGTACGAACCGTGTTGTCT+CGG 0.428215 tig0022246:+3964 None:intergenic
TAACAGAACCATTATGTTGA+AGG 0.435178 tig0022246:+5272 None:intergenic
GGTGGCTTATATTGACTAGC+TGG 0.437086 tig0022246:+3347 None:intergenic
TAAACGCGGCTTAAAGGTTA+TGG 0.437413 tig0022246:-4527 Msa1398140:CDS
AGTTCATCATCTGTCATCAT+TGG 0.437707 tig0022246:+5361 None:intergenic
TTTATCAAGTGCGTTACAAC+AGG 0.439169 tig0022246:-4106 Msa1398140:CDS
TTGTTTACATTTGGCCTTGG+AGG 0.440497 tig0022246:+4592 None:intergenic
AAAGTCAACGTAATCATCAT+AGG 0.442906 tig0022246:+5177 None:intergenic
ATAGATTGTTTCCGAATGTT+CGG 0.446193 tig0022246:-4129 Msa1398140:CDS
TGATTCCTTATAATCTTTGG+TGG 0.451928 tig0022246:+3329 None:intergenic
TTAATCAAACCTATGGCATA+AGG 0.457001 tig0022246:+4340 None:intergenic
AGTCTAATAACTTGAAGGAA+TGG 0.458645 tig0022246:-3529 Msa1398140:CDS
TTTGCTTCTGAGTGTTGTGT+AGG 0.460989 tig0022246:-4013 Msa1398140:CDS
AATTTCCATCTTGCACTAAG+AGG 0.462310 tig0022246:-3662 Msa1398140:CDS
TCCTACAATCGGTACATCTC+CGG 0.465120 tig0022246:+4045 None:intergenic
GAAGCTGTAATCAACACTAT+TGG 0.466393 tig0022246:-4223 Msa1398140:CDS
GTCTAATAACTTGAAGGAAT+GGG 0.466720 tig0022246:-3528 Msa1398140:CDS
ACCTTCAACTGCTTTGGCAT+CGG 0.468257 tig0022246:+3581 None:intergenic
AGTACGAACCGTGTTGTCTC+GGG 0.470826 tig0022246:+3965 None:intergenic
GATCGAAAGCTCCTTGCCTT+AGG 0.471571 tig0022246:+3402 None:intergenic
GAAGGTATTTATAGAAGTAG+AGG 0.481000 tig0022246:-3564 Msa1398140:CDS
CACTTGATAAACCGAACATT+CGG 0.481170 tig0022246:+4118 None:intergenic
AAATGCTTTAATCAAACCTA+TGG 0.485080 tig0022246:+4333 None:intergenic
ATTAGTACTCCTTATGCCAT+AGG 0.485763 tig0022246:-4349 Msa1398140:CDS
GTTTGTGAAGGTAAGAATTG+GGG 0.497604 tig0022246:-4163 Msa1398140:CDS
ACAGCCTCGGTGACCAAGAA+AGG 0.505851 tig0022246:+4743 None:intergenic
ACAAGACTTGTGAAAGTAGC+AGG 0.506161 tig0022246:+5211 None:intergenic
GATCTTTGCGGCGTTGAGGT+TGG 0.507445 tig0022246:-3860 Msa1398140:CDS
ACCGATGCCAAAGCAGTTGA+AGG 0.508276 tig0022246:-3582 Msa1398140:CDS
GCCGGAGATGTACCGATTGT+AGG 0.513506 tig0022246:-4046 Msa1398140:CDS
GAGAATGATGAGGATGTTGT+TGG 0.515858 tig0022246:-3896 Msa1398140:CDS
TTGAGCGAAGAGTTTCCAAC+TGG 0.520470 tig0022246:+5296 None:intergenic
AAGTAATCTCCTCCTACAAT+CGG 0.525370 tig0022246:+4034 None:intergenic
AGAGGAGTCTAATAACTTGA+AGG 0.526734 tig0022246:-3534 Msa1398140:CDS
TGCAACGTTCTCTAGTCCCC+TGG 0.529657 tig0022246:-4455 Msa1398140:CDS
ATACTCTTTACAAACTGGTA+AGG 0.530086 tig0022246:-4494 Msa1398140:CDS
AGAATCTCAGCTGAAGACTT+AGG 0.531876 tig0022246:+3716 None:intergenic
AGAAGTAGAGGAAGTTCAAG+AGG 0.534240 tig0022246:-3552 Msa1398140:CDS
CTATTTGACAATTCATGTTG+AGG 0.536323 tig0022246:+4196 None:intergenic
CAACTTGAGGTGATGAATTG+TGG 0.539457 tig0022246:+3756 None:intergenic
TTTATCCACCAGATGGCTGA+TGG 0.540871 tig0022246:-5157 Msa1398140:CDS
AGAATAAGATTAGTTTGTGA+AGG 0.542973 tig0022246:-4175 Msa1398140:CDS
CAAATGTAAACAAGACCCTA+TGG 0.544695 tig0022246:-4582 Msa1398140:CDS
GAGAACGTTGCAAGTTGTTG+AGG 0.552779 tig0022246:+4466 None:intergenic
GAGCAAACAGTGGATCTTTG+CGG 0.554405 tig0022246:-3872 Msa1398140:CDS
AGATCCAATTATAACTTCCA+GGG 0.558522 tig0022246:+4438 None:intergenic
CTTGCACTAAGAGGTGCTAC+GGG 0.560278 tig0022246:-3653 Msa1398140:CDS
TCTTGCACTAAGAGGTGCTA+CGG 0.561894 tig0022246:-3654 Msa1398140:CDS
TGTGAAGGTAAGAATTGGGG+TGG 0.563626 tig0022246:-4160 Msa1398140:CDS
TGTCAGCATAGAGAAACCAT+AGG 0.564785 tig0022246:+4566 None:intergenic
AAATGGAAGAAACTCAAAGT+AGG 0.564938 tig0022246:+3928 None:intergenic
AGTTATAATTGGATCTAATG+TGG 0.566485 tig0022246:-4431 Msa1398140:CDS
AACTCAAAGTAGGCAAAAGT+AGG 0.567325 tig0022246:+3938 None:intergenic
CGTTGACTTTATCCACCAGA+TGG 0.567543 tig0022246:-5164 Msa1398140:CDS
GTTCTCCATCAGCCATCTGG+TGG 0.567675 tig0022246:+5152 None:intergenic
AAGTCATGAAATTTCAGATG+AGG 0.571087 tig0022246:-4254 Msa1398140:CDS
GCTGTATCGCTGTTCTTCAA+AGG 0.571437 tig0022246:-4725 Msa1398140:intron
AGTGGATCTTTGCGGCGTTG+AGG 0.572967 tig0022246:-3864 Msa1398140:CDS
TAGCACCTCTTAGTGCAAGA+TGG 0.573998 tig0022246:+3657 None:intergenic
TGGTTTAGGAGCATTGTACA+AGG 0.576214 tig0022246:-3468 Msa1398140:CDS
CTCATAACAAATTCAACTTG+AGG 0.577362 tig0022246:+3743 None:intergenic
GATTCCTAAGGCCACAGAGA+AGG 0.577447 tig0022246:+4389 None:intergenic
ACTTAATGATAATTATCCTA+AGG 0.579665 tig0022246:-3418 Msa1398140:CDS
ATGATAATTATCCTAAGGCA+AGG 0.584299 tig0022246:-3413 Msa1398140:CDS
GCTGTAATCAACACTATTGG+TGG 0.584574 tig0022246:-4220 Msa1398140:CDS
AAAGGCTTGAATCAAAGTAA+GGG 0.587333 tig0022246:+4778 None:intergenic
GTCAGCATAGAGAAACCATA+GGG 0.587941 tig0022246:+4567 None:intergenic
TCCTAAGGCCACAGAGAAGG+TGG 0.588668 tig0022246:+4392 None:intergenic
CTATAGAAGAAGCAGAGAAG+AGG 0.590382 tig0022246:+5100 None:intergenic
CTATGTGTAGATCTTGATTG+TGG 0.591963 tig0022246:-4283 Msa1398140:CDS
TCCTAAACCATTCTCAAGAG+AGG 0.592651 tig0022246:+3481 None:intergenic
CTATAACATCAAGATTCCTA+AGG 0.593541 tig0022246:+4377 None:intergenic
GAAGAACAGCGATACAGCCT+CGG 0.604012 tig0022246:+4730 None:intergenic
GGATGCAAAACATCACCAGT+TGG 0.610098 tig0022246:-5311 Msa1398140:CDS
GGAGATGTACCGATTGTAGG+AGG 0.617561 tig0022246:-4043 Msa1398140:CDS
ACGAACCGTGTTGTCTCGGG+TGG 0.628593 tig0022246:+3968 None:intergenic
ATTACTACTACAACTAAACG+CGG 0.642820 tig0022246:-4541 Msa1398140:CDS
CACAACCACCCGAGACAACA+CGG 0.644768 tig0022246:-3973 Msa1398140:CDS
GATCCAATTATAACTTCCAG+GGG 0.646433 tig0022246:+4439 None:intergenic
GATGCAGGAAGTTTCCTCCA+AGG 0.648953 tig0022246:-4606 Msa1398140:intron
GCCTCCTTTCTTGGTCACCG+AGG 0.653577 tig0022246:-4747 Msa1398140:CDS
GGTTGGAAAGATGTATGAAG+TGG 0.655471 tig0022246:-3843 Msa1398140:CDS
AGTTTGTAAAGAGTATGAAG+AGG 0.658887 tig0022246:+4501 None:intergenic
TAATCATCATAGGAAGACAA+AGG 0.675878 tig0022246:+5187 None:intergenic
GAAGCTAGAAGAGTTGACAA+TGG 0.676230 tig0022246:-5332 Msa1398140:CDS
ATGTATTGCCACCTTCTCTG+TGG 0.676460 tig0022246:-4400 Msa1398140:CDS
GCCTCGGTGACCAAGAAAGG+AGG 0.681075 tig0022246:+4746 None:intergenic
ATTTGTATCGATAAAATCCG+CGG 0.690641 tig0022246:+3807 None:intergenic
TGAGATGAATGAGAATGATG+AGG 0.693524 tig0022246:-3906 Msa1398140:CDS
TGTTGTTGGTGAGCAAACAG+TGG 0.703428 tig0022246:-3882 Msa1398140:CDS
GTGGTTGTTACTACTTACCG+CGG 0.726364 tig0022246:-3824 Msa1398140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATTTTGTTTATAAATTAT+AGG + tig0022246:3724-3743 None:intergenic 10.0%
!!! CAATTTTGTTTATAAATTAT+AGG + tig0022246:3724-3743 None:intergenic 10.0%
!!! AATGCAATTTCATTAATTTT+AGG - tig0022246:3682-3701 Msa1398140:CDS 15.0%
!!! AATGCAATTTCATTAATTTT+AGG - tig0022246:3682-3701 Msa1398140:CDS 15.0%
!!! TTTCAATTAGTTCTTTTTCT+AGG - tig0022246:3575-3594 Msa1398140:CDS 20.0%
!!! TTTGTTATAGGAGAATTTAT+TGG - tig0022246:3599-3618 Msa1398140:CDS 20.0%
!! TCAATGATTTAGATCAAAAA+GGG + tig0022246:3641-3660 None:intergenic 20.0%
!!! AAATTGCATTTTTAATGCAA+AGG + tig0022246:3672-3691 None:intergenic 20.0%
!!! GATTAAAGCATTTAGTTTTT+TGG - tig0022246:4306-4325 Msa1398140:CDS 20.0%
!! ACTTAATGATAATTATCCTA+AGG - tig0022246:5211-5230 Msa1398140:CDS 20.0%
!!! TTTCAATTAGTTCTTTTTCT+AGG - tig0022246:3575-3594 Msa1398140:CDS 20.0%
!!! TTTGTTATAGGAGAATTTAT+TGG - tig0022246:3599-3618 Msa1398140:CDS 20.0%
!! TCAATGATTTAGATCAAAAA+GGG + tig0022246:3641-3660 None:intergenic 20.0%
!!! AAATTGCATTTTTAATGCAA+AGG + tig0022246:3672-3691 None:intergenic 20.0%
!!! GATTAAAGCATTTAGTTTTT+TGG - tig0022246:4306-4325 Msa1398140:CDS 20.0%
!! ACTTAATGATAATTATCCTA+AGG - tig0022246:5211-5230 Msa1398140:CDS 20.0%
! TTGAAATGAAGAGTTAAAAG+TGG + tig0022246:3561-3580 None:intergenic 25.0%
! GTCAATGATTTAGATCAAAA+AGG + tig0022246:3642-3661 None:intergenic 25.0%
! ACGTAAGAACTTTCAAAATT+TGG + tig0022246:3968-3987 None:intergenic 25.0%
! AGTTATAATTGGATCTAATG+TGG - tig0022246:4198-4217 Msa1398140:CDS 25.0%
! AAATGCTTTAATCAAACCTA+TGG + tig0022246:4299-4318 None:intergenic 25.0%
!!! AGAATAAGATTAGTTTGTGA+AGG - tig0022246:4454-4473 Msa1398140:CDS 25.0%
!!! CAAAAACTTAAGTTTTATGC+CGG - tig0022246:4565-4584 Msa1398140:CDS 25.0%
!! GGATTTTATCGATACAAATT+GGG - tig0022246:4826-4845 Msa1398140:intron 25.0%
! TCATGATTCCTTATAATCTT+TGG + tig0022246:5306-5325 None:intergenic 25.0%
!!! TTCTTTTGTTAGAGTATCAA+TGG - tig0022246:5350-5369 Msa1398140:CDS 25.0%
! TTGAAATGAAGAGTTAAAAG+TGG + tig0022246:3561-3580 None:intergenic 25.0%
! GTCAATGATTTAGATCAAAA+AGG + tig0022246:3642-3661 None:intergenic 25.0%
! ACGTAAGAACTTTCAAAATT+TGG + tig0022246:3968-3987 None:intergenic 25.0%
! AGTTATAATTGGATCTAATG+TGG - tig0022246:4198-4217 Msa1398140:CDS 25.0%
! AAATGCTTTAATCAAACCTA+TGG + tig0022246:4299-4318 None:intergenic 25.0%
!!! AGAATAAGATTAGTTTGTGA+AGG - tig0022246:4454-4473 Msa1398140:CDS 25.0%
!!! CAAAAACTTAAGTTTTATGC+CGG - tig0022246:4565-4584 Msa1398140:CDS 25.0%
!! GGATTTTATCGATACAAATT+GGG - tig0022246:4826-4845 Msa1398140:intron 25.0%
! TCATGATTCCTTATAATCTT+TGG + tig0022246:5306-5325 None:intergenic 25.0%
!!! TTCTTTTGTTAGAGTATCAA+TGG - tig0022246:5350-5369 Msa1398140:CDS 25.0%
TAACAGAACCATTATGTTGA+AGG + tig0022246:3360-3379 None:intergenic 30.0%
TAATCATCATAGGAAGACAA+AGG + tig0022246:3445-3464 None:intergenic 30.0%
AAAGTCAACGTAATCATCAT+AGG + tig0022246:3455-3474 None:intergenic 30.0%
!!! CTTTTTCTAGGCTTTGTTAT+AGG - tig0022246:3587-3606 Msa1398140:CDS 30.0%
! TTTTTAATGCAAAGGTGATG+AGG + tig0022246:3664-3683 None:intergenic 30.0%
AAAGGCTTGAATCAAAGTAA+GGG + tig0022246:3854-3873 None:intergenic 30.0%
ATTACTACTACAACTAAACG+CGG - tig0022246:4088-4107 Msa1398140:CDS 30.0%
! AGTTTGTAAAGAGTATGAAG+AGG + tig0022246:4131-4150 None:intergenic 30.0%
TCTTCATACTCTTTACAAAC+TGG - tig0022246:4130-4149 Msa1398140:CDS 30.0%
ATACTCTTTACAAACTGGTA+AGG - tig0022246:4135-4154 Msa1398140:CDS 30.0%
AGATCCAATTATAACTTCCA+GGG + tig0022246:4194-4213 None:intergenic 30.0%
TAGATCCAATTATAACTTCC+AGG + tig0022246:4195-4214 None:intergenic 30.0%
CTATAACATCAAGATTCCTA+AGG + tig0022246:4255-4274 None:intergenic 30.0%
AGGAATCTTGATGTTATAGA+TGG - tig0022246:4256-4275 Msa1398140:CDS 30.0%
TTAATCAAACCTATGGCATA+AGG + tig0022246:4292-4311 None:intergenic 30.0%
!!! TTAGTTTTTTGGAGTCCAAA+TGG - tig0022246:4317-4336 Msa1398140:CDS 30.0%
!!! TAGTTTTTTGGAGTCCAAAT+GGG - tig0022246:4318-4337 Msa1398140:CDS 30.0%
! TCATCTGAAATTTCATGACT+TGG + tig0022246:4376-4395 None:intergenic 30.0%
AAGTCATGAAATTTCAGATG+AGG - tig0022246:4375-4394 Msa1398140:CDS 30.0%
CTATTTGACAATTCATGTTG+AGG + tig0022246:4436-4455 None:intergenic 30.0%
! TAGTTTGTGAAGGTAAGAAT+TGG - tig0022246:4464-4483 Msa1398140:CDS 30.0%
AGTTTGTGAAGGTAAGAATT+GGG - tig0022246:4465-4484 Msa1398140:CDS 30.0%
ATAGATTGTTTCCGAATGTT+CGG - tig0022246:4500-4519 Msa1398140:CDS 30.0%
AAATGGAAGAAACTCAAAGT+AGG + tig0022246:4704-4723 None:intergenic 30.0%
TCATTCTCATTCATCTCAAA+TGG + tig0022246:4721-4740 None:intergenic 30.0%
! ATTTGTATCGATAAAATCCG+CGG + tig0022246:4825-4844 None:intergenic 30.0%
! CGGATTTTATCGATACAAAT+TGG - tig0022246:4825-4844 Msa1398140:intron 30.0%
CTCATAACAAATTCAACTTG+AGG + tig0022246:4889-4908 None:intergenic 30.0%
ATAAATACCTTCAACTGCTT+TGG + tig0022246:5057-5076 None:intergenic 30.0%
!! GAAGGTATTTATAGAAGTAG+AGG - tig0022246:5065-5084 Msa1398140:intron 30.0%
AGTCTAATAACTTGAAGGAA+TGG - tig0022246:5100-5119 Msa1398140:CDS 30.0%
GTCTAATAACTTGAAGGAAT+GGG - tig0022246:5101-5120 Msa1398140:CDS 30.0%
AGAGAGAAAAAGGTCATATA+AGG - tig0022246:5187-5206 Msa1398140:CDS 30.0%
ATGATAATTATCCTAAGGCA+AGG - tig0022246:5216-5235 Msa1398140:CDS 30.0%
TTTCGATCAGTTATCAGATT+TGG - tig0022246:5242-5261 Msa1398140:CDS 30.0%
!!! TCAGATTTGGCTTTTAAGAA+TGG - tig0022246:5255-5274 Msa1398140:CDS 30.0%
ATAAGCCACCAAAGATTATA+AGG - tig0022246:5295-5314 Msa1398140:CDS 30.0%
TGATTCCTTATAATCTTTGG+TGG + tig0022246:5303-5322 None:intergenic 30.0%
TAACAGAACCATTATGTTGA+AGG + tig0022246:3360-3379 None:intergenic 30.0%
TAATCATCATAGGAAGACAA+AGG + tig0022246:3445-3464 None:intergenic 30.0%
AAAGTCAACGTAATCATCAT+AGG + tig0022246:3455-3474 None:intergenic 30.0%
!!! CTTTTTCTAGGCTTTGTTAT+AGG - tig0022246:3587-3606 Msa1398140:CDS 30.0%
! TTTTTAATGCAAAGGTGATG+AGG + tig0022246:3664-3683 None:intergenic 30.0%
AAAGGCTTGAATCAAAGTAA+GGG + tig0022246:3854-3873 None:intergenic 30.0%
ATTACTACTACAACTAAACG+CGG - tig0022246:4088-4107 Msa1398140:CDS 30.0%
! AGTTTGTAAAGAGTATGAAG+AGG + tig0022246:4131-4150 None:intergenic 30.0%
TCTTCATACTCTTTACAAAC+TGG - tig0022246:4130-4149 Msa1398140:CDS 30.0%
ATACTCTTTACAAACTGGTA+AGG - tig0022246:4135-4154 Msa1398140:CDS 30.0%
AGATCCAATTATAACTTCCA+GGG + tig0022246:4194-4213 None:intergenic 30.0%
TAGATCCAATTATAACTTCC+AGG + tig0022246:4195-4214 None:intergenic 30.0%
CTATAACATCAAGATTCCTA+AGG + tig0022246:4255-4274 None:intergenic 30.0%
AGGAATCTTGATGTTATAGA+TGG - tig0022246:4256-4275 Msa1398140:CDS 30.0%
TTAATCAAACCTATGGCATA+AGG + tig0022246:4292-4311 None:intergenic 30.0%
!!! TTAGTTTTTTGGAGTCCAAA+TGG - tig0022246:4317-4336 Msa1398140:CDS 30.0%
!!! TAGTTTTTTGGAGTCCAAAT+GGG - tig0022246:4318-4337 Msa1398140:CDS 30.0%
! TCATCTGAAATTTCATGACT+TGG + tig0022246:4376-4395 None:intergenic 30.0%
AAGTCATGAAATTTCAGATG+AGG - tig0022246:4375-4394 Msa1398140:CDS 30.0%
CTATTTGACAATTCATGTTG+AGG + tig0022246:4436-4455 None:intergenic 30.0%
! TAGTTTGTGAAGGTAAGAAT+TGG - tig0022246:4464-4483 Msa1398140:CDS 30.0%
AGTTTGTGAAGGTAAGAATT+GGG - tig0022246:4465-4484 Msa1398140:CDS 30.0%
ATAGATTGTTTCCGAATGTT+CGG - tig0022246:4500-4519 Msa1398140:CDS 30.0%
AAATGGAAGAAACTCAAAGT+AGG + tig0022246:4704-4723 None:intergenic 30.0%
TCATTCTCATTCATCTCAAA+TGG + tig0022246:4721-4740 None:intergenic 30.0%
! ATTTGTATCGATAAAATCCG+CGG + tig0022246:4825-4844 None:intergenic 30.0%
! CGGATTTTATCGATACAAAT+TGG - tig0022246:4825-4844 Msa1398140:intron 30.0%
CTCATAACAAATTCAACTTG+AGG + tig0022246:4889-4908 None:intergenic 30.0%
ATAAATACCTTCAACTGCTT+TGG + tig0022246:5057-5076 None:intergenic 30.0%
!! GAAGGTATTTATAGAAGTAG+AGG - tig0022246:5065-5084 Msa1398140:intron 30.0%
AGTCTAATAACTTGAAGGAA+TGG - tig0022246:5100-5119 Msa1398140:CDS 30.0%
GTCTAATAACTTGAAGGAAT+GGG - tig0022246:5101-5120 Msa1398140:CDS 30.0%
AGAGAGAAAAAGGTCATATA+AGG - tig0022246:5187-5206 Msa1398140:CDS 30.0%
ATGATAATTATCCTAAGGCA+AGG - tig0022246:5216-5235 Msa1398140:CDS 30.0%
TTTCGATCAGTTATCAGATT+TGG - tig0022246:5242-5261 Msa1398140:CDS 30.0%
!!! TCAGATTTGGCTTTTAAGAA+TGG - tig0022246:5255-5274 Msa1398140:CDS 30.0%
ATAAGCCACCAAAGATTATA+AGG - tig0022246:5295-5314 Msa1398140:CDS 30.0%
TGATTCCTTATAATCTTTGG+TGG + tig0022246:5303-5322 None:intergenic 30.0%
TTACTCTGATGTGATTGTGA+TGG - tig0022246:3749-3768 Msa1398140:CDS 35.0%
! TCAAAGTAAGGGATCAGTTT+TGG + tig0022246:3843-3862 None:intergenic 35.0%
GAAAGGCTTGAATCAAAGTA+AGG + tig0022246:3855-3874 None:intergenic 35.0%
!! CATAGGGTCTTGTTTACATT+TGG + tig0022246:4049-4068 None:intergenic 35.0%
CAAATGTAAACAAGACCCTA+TGG - tig0022246:4047-4066 Msa1398140:CDS 35.0%
GATCCAATTATAACTTCCAG+GGG + tig0022246:4193-4212 None:intergenic 35.0%
ATTAGTACTCCTTATGCCAT+AGG - tig0022246:4280-4299 Msa1398140:CDS 35.0%
CTATGTGTAGATCTTGATTG+TGG - tig0022246:4346-4365 Msa1398140:CDS 35.0%
GAAGCTGTAATCAACACTAT+TGG - tig0022246:4406-4425 Msa1398140:CDS 35.0%
GTTTGTGAAGGTAAGAATTG+GGG - tig0022246:4466-4485 Msa1398140:CDS 35.0%
CACTTGATAAACCGAACATT+CGG + tig0022246:4514-4533 None:intergenic 35.0%
TTTATCAAGTGCGTTACAAC+AGG - tig0022246:4523-4542 Msa1398140:CDS 35.0%
AAGTAATCTCCTCCTACAAT+CGG + tig0022246:4598-4617 None:intergenic 35.0%
AACTCAAAGTAGGCAAAAGT+AGG + tig0022246:4694-4713 None:intergenic 35.0%
TGAGATGAATGAGAATGATG+AGG - tig0022246:4723-4742 Msa1398140:intron 35.0%
AATTTCCATCTTGCACTAAG+AGG - tig0022246:4967-4986 Msa1398140:intron 35.0%
TGTTGAGTTTGCAAGTTTCT+TGG - tig0022246:5017-5036 Msa1398140:intron 35.0%
AGAGGAGTCTAATAACTTGA+AGG - tig0022246:5095-5114 Msa1398140:intron 35.0%
TGTATTTCCTCTCTTGAGAA+TGG - tig0022246:5141-5160 Msa1398140:CDS 35.0%
TCATGAAGTTGTCAAGTTCT+TGG - tig0022246:5320-5339 Msa1398140:CDS 35.0%
TTACTCTGATGTGATTGTGA+TGG - tig0022246:3749-3768 Msa1398140:CDS 35.0%
! TCAAAGTAAGGGATCAGTTT+TGG + tig0022246:3843-3862 None:intergenic 35.0%
GAAAGGCTTGAATCAAAGTA+AGG + tig0022246:3855-3874 None:intergenic 35.0%
!! CATAGGGTCTTGTTTACATT+TGG + tig0022246:4049-4068 None:intergenic 35.0%
CAAATGTAAACAAGACCCTA+TGG - tig0022246:4047-4066 Msa1398140:CDS 35.0%
GATCCAATTATAACTTCCAG+GGG + tig0022246:4193-4212 None:intergenic 35.0%
ATTAGTACTCCTTATGCCAT+AGG - tig0022246:4280-4299 Msa1398140:CDS 35.0%
CTATGTGTAGATCTTGATTG+TGG - tig0022246:4346-4365 Msa1398140:CDS 35.0%
GAAGCTGTAATCAACACTAT+TGG - tig0022246:4406-4425 Msa1398140:CDS 35.0%
GTTTGTGAAGGTAAGAATTG+GGG - tig0022246:4466-4485 Msa1398140:CDS 35.0%
CACTTGATAAACCGAACATT+CGG + tig0022246:4514-4533 None:intergenic 35.0%
TTTATCAAGTGCGTTACAAC+AGG - tig0022246:4523-4542 Msa1398140:CDS 35.0%
AAGTAATCTCCTCCTACAAT+CGG + tig0022246:4598-4617 None:intergenic 35.0%
AACTCAAAGTAGGCAAAAGT+AGG + tig0022246:4694-4713 None:intergenic 35.0%
TGAGATGAATGAGAATGATG+AGG - tig0022246:4723-4742 Msa1398140:intron 35.0%
AATTTCCATCTTGCACTAAG+AGG - tig0022246:4967-4986 Msa1398140:intron 35.0%
TGTTGAGTTTGCAAGTTTCT+TGG - tig0022246:5017-5036 Msa1398140:intron 35.0%
AGAGGAGTCTAATAACTTGA+AGG - tig0022246:5095-5114 Msa1398140:intron 35.0%
TGTATTTCCTCTCTTGAGAA+TGG - tig0022246:5141-5160 Msa1398140:CDS 35.0%
TCATGAAGTTGTCAAGTTCT+TGG - tig0022246:5320-5339 Msa1398140:CDS 35.0%
GAAGCTAGAAGAGTTGACAA+TGG - tig0022246:3297-3316 Msa1398140:CDS 40.0%
CGCTCAATCCTTCAACATAA+TGG - tig0022246:3349-3368 Msa1398140:CDS 40.0%
ACAAGACTTGTGAAAGTAGC+AGG + tig0022246:3421-3440 None:intergenic 40.0%
CTATAGAAGAAGCAGAGAAG+AGG + tig0022246:3532-3551 None:intergenic 40.0%
CTCTTCTCTGCTTCTTCTAT+AGG - tig0022246:3530-3549 Msa1398140:CDS 40.0%
!!! GATCAGTTTTGGTTTCATGG+AGG + tig0022246:3832-3851 None:intergenic 40.0%
!!! AGGGATCAGTTTTGGTTTCA+TGG + tig0022246:3835-3854 None:intergenic 40.0%
!! TTGTTTACATTTGGCCTTGG+AGG + tig0022246:4040-4059 None:intergenic 40.0%
!! GTCTTGTTTACATTTGGCCT+TGG + tig0022246:4043-4062 None:intergenic 40.0%
GTCAGCATAGAGAAACCATA+GGG + tig0022246:4065-4084 None:intergenic 40.0%
TGTCAGCATAGAGAAACCAT+AGG + tig0022246:4066-4085 None:intergenic 40.0%
TACAACTAAACGCGGCTTAA+AGG - tig0022246:4096-4115 Msa1398140:CDS 40.0%
TAAACGCGGCTTAAAGGTTA+TGG - tig0022246:4102-4121 Msa1398140:CDS 40.0%
AGTCCCCTGGAAGTTATAAT+TGG - tig0022246:4187-4206 Msa1398140:CDS 40.0%
GCTGTAATCAACACTATTGG+TGG - tig0022246:4409-4428 Msa1398140:CDS 40.0%
! TTTGCTTCTGAGTGTTGTGT+AGG - tig0022246:4616-4635 Msa1398140:intron 40.0%
GAGAATGATGAGGATGTTGT+TGG - tig0022246:4733-4752 Msa1398140:CDS 40.0%
GGTTGGAAAGATGTATGAAG+TGG - tig0022246:4786-4805 Msa1398140:CDS 40.0%
GGCGATATAGTTAGAGTTGT+TGG - tig0022246:4847-4866 Msa1398140:intron 40.0%
CAACTTGAGGTGATGAATTG+TGG + tig0022246:4876-4895 None:intergenic 40.0%
AGAATCTCAGCTGAAGACTT+AGG + tig0022246:4916-4935 None:intergenic 40.0%
GTTTGCAAGTTTCTTGGATC+AGG - tig0022246:5023-5042 Msa1398140:intron 40.0%
AGAAGTAGAGGAAGTTCAAG+AGG - tig0022246:5077-5096 Msa1398140:intron 40.0%
TCCTCTCTTGAGAATGGTTT+AGG - tig0022246:5147-5166 Msa1398140:CDS 40.0%
TCCTAAACCATTCTCAAGAG+AGG + tig0022246:5151-5170 None:intergenic 40.0%
!! TGGTTTAGGAGCATTGTACA+AGG - tig0022246:5161-5180 Msa1398140:CDS 40.0%
TACAAGGTGCAGAGAGAAAA+AGG - tig0022246:5177-5196 Msa1398140:CDS 40.0%
GAAGCTAGAAGAGTTGACAA+TGG - tig0022246:3297-3316 Msa1398140:CDS 40.0%
CGCTCAATCCTTCAACATAA+TGG - tig0022246:3349-3368 Msa1398140:CDS 40.0%
ACAAGACTTGTGAAAGTAGC+AGG + tig0022246:3421-3440 None:intergenic 40.0%
CTATAGAAGAAGCAGAGAAG+AGG + tig0022246:3532-3551 None:intergenic 40.0%
CTCTTCTCTGCTTCTTCTAT+AGG - tig0022246:3530-3549 Msa1398140:CDS 40.0%
!!! GATCAGTTTTGGTTTCATGG+AGG + tig0022246:3832-3851 None:intergenic 40.0%
!!! AGGGATCAGTTTTGGTTTCA+TGG + tig0022246:3835-3854 None:intergenic 40.0%
!! TTGTTTACATTTGGCCTTGG+AGG + tig0022246:4040-4059 None:intergenic 40.0%
!! GTCTTGTTTACATTTGGCCT+TGG + tig0022246:4043-4062 None:intergenic 40.0%
GTCAGCATAGAGAAACCATA+GGG + tig0022246:4065-4084 None:intergenic 40.0%
TGTCAGCATAGAGAAACCAT+AGG + tig0022246:4066-4085 None:intergenic 40.0%
TACAACTAAACGCGGCTTAA+AGG - tig0022246:4096-4115 Msa1398140:CDS 40.0%
TAAACGCGGCTTAAAGGTTA+TGG - tig0022246:4102-4121 Msa1398140:CDS 40.0%
AGTCCCCTGGAAGTTATAAT+TGG - tig0022246:4187-4206 Msa1398140:CDS 40.0%
GCTGTAATCAACACTATTGG+TGG - tig0022246:4409-4428 Msa1398140:CDS 40.0%
! TTTGCTTCTGAGTGTTGTGT+AGG - tig0022246:4616-4635 Msa1398140:intron 40.0%
GAGAATGATGAGGATGTTGT+TGG - tig0022246:4733-4752 Msa1398140:CDS 40.0%
GGTTGGAAAGATGTATGAAG+TGG - tig0022246:4786-4805 Msa1398140:CDS 40.0%
GGCGATATAGTTAGAGTTGT+TGG - tig0022246:4847-4866 Msa1398140:intron 40.0%
CAACTTGAGGTGATGAATTG+TGG + tig0022246:4876-4895 None:intergenic 40.0%
AGAATCTCAGCTGAAGACTT+AGG + tig0022246:4916-4935 None:intergenic 40.0%
GTTTGCAAGTTTCTTGGATC+AGG - tig0022246:5023-5042 Msa1398140:intron 40.0%
AGAAGTAGAGGAAGTTCAAG+AGG - tig0022246:5077-5096 Msa1398140:intron 40.0%
TCCTCTCTTGAGAATGGTTT+AGG - tig0022246:5147-5166 Msa1398140:CDS 40.0%
TCCTAAACCATTCTCAAGAG+AGG + tig0022246:5151-5170 None:intergenic 40.0%
!! TGGTTTAGGAGCATTGTACA+AGG - tig0022246:5161-5180 Msa1398140:CDS 40.0%
TACAAGGTGCAGAGAGAAAA+AGG - tig0022246:5177-5196 Msa1398140:CDS 40.0%
GGATGCAAAACATCACCAGT+TGG - tig0022246:3318-3337 Msa1398140:CDS 45.0%
TTGAGCGAAGAGTTTCCAAC+TGG + tig0022246:3336-3355 None:intergenic 45.0%
!! CGTTGACTTTATCCACCAGA+TGG - tig0022246:3465-3484 Msa1398140:CDS 45.0%
TTTATCCACCAGATGGCTGA+TGG - tig0022246:3472-3491 Msa1398140:CDS 45.0%
GACTTTGTCTTTCTCAGCTC+AGG - tig0022246:3801-3820 Msa1398140:CDS 45.0%
! GAAAGGAGGCAGCTTTTGAA+AGG + tig0022246:3872-3891 None:intergenic 45.0%
TCAAAAGCTGCCTCCTTTCT+TGG - tig0022246:3873-3892 Msa1398140:CDS 45.0%
GCTGTATCGCTGTTCTTCAA+AGG - tig0022246:3904-3923 Msa1398140:CDS 45.0%
! ATCTGAAACCTCCATGATGC+AGG - tig0022246:4008-4027 Msa1398140:CDS 45.0%
GAGAACGTTGCAAGTTGTTG+AGG + tig0022246:4166-4185 None:intergenic 45.0%
ATGTATTGCCACCTTCTCTG+TGG - tig0022246:4229-4248 Msa1398140:CDS 45.0%
TACACATAGCTGCTCCCATT+TGG + tig0022246:4335-4354 None:intergenic 45.0%
TGTGAAGGTAAGAATTGGGG+TGG - tig0022246:4469-4488 Msa1398140:CDS 45.0%
TCCTACAATCGGTACATCTC+CGG + tig0022246:4587-4606 None:intergenic 45.0%
TAGTACGAACCGTGTTGTCT+CGG + tig0022246:4668-4687 None:intergenic 45.0%
! TGTTGTTGGTGAGCAAACAG+TGG - tig0022246:4747-4766 Msa1398140:CDS 45.0%
GAGCAAACAGTGGATCTTTG+CGG - tig0022246:4757-4776 Msa1398140:CDS 45.0%
GTGGTTGTTACTACTTACCG+CGG - tig0022246:4805-4824 Msa1398140:CDS 45.0%
TAGCACCTCTTAGTGCAAGA+TGG + tig0022246:4975-4994 None:intergenic 45.0%
!! TCTTGCACTAAGAGGTGCTA+CGG - tig0022246:4975-4994 Msa1398140:intron 45.0%
ACCTTCAACTGCTTTGGCAT+CGG + tig0022246:5051-5070 None:intergenic 45.0%
! GGTGGCTTATATTGACTAGC+TGG + tig0022246:5285-5304 None:intergenic 45.0%
GGATGCAAAACATCACCAGT+TGG - tig0022246:3318-3337 Msa1398140:CDS 45.0%
TTGAGCGAAGAGTTTCCAAC+TGG + tig0022246:3336-3355 None:intergenic 45.0%
!! CGTTGACTTTATCCACCAGA+TGG - tig0022246:3465-3484 Msa1398140:CDS 45.0%
TTTATCCACCAGATGGCTGA+TGG - tig0022246:3472-3491 Msa1398140:CDS 45.0%
GACTTTGTCTTTCTCAGCTC+AGG - tig0022246:3801-3820 Msa1398140:CDS 45.0%
! GAAAGGAGGCAGCTTTTGAA+AGG + tig0022246:3872-3891 None:intergenic 45.0%
TCAAAAGCTGCCTCCTTTCT+TGG - tig0022246:3873-3892 Msa1398140:CDS 45.0%
GCTGTATCGCTGTTCTTCAA+AGG - tig0022246:3904-3923 Msa1398140:CDS 45.0%
! ATCTGAAACCTCCATGATGC+AGG - tig0022246:4008-4027 Msa1398140:CDS 45.0%
GAGAACGTTGCAAGTTGTTG+AGG + tig0022246:4166-4185 None:intergenic 45.0%
ATGTATTGCCACCTTCTCTG+TGG - tig0022246:4229-4248 Msa1398140:CDS 45.0%
TACACATAGCTGCTCCCATT+TGG + tig0022246:4335-4354 None:intergenic 45.0%
TGTGAAGGTAAGAATTGGGG+TGG - tig0022246:4469-4488 Msa1398140:CDS 45.0%
TCCTACAATCGGTACATCTC+CGG + tig0022246:4587-4606 None:intergenic 45.0%
TAGTACGAACCGTGTTGTCT+CGG + tig0022246:4668-4687 None:intergenic 45.0%
! TGTTGTTGGTGAGCAAACAG+TGG - tig0022246:4747-4766 Msa1398140:CDS 45.0%
GAGCAAACAGTGGATCTTTG+CGG - tig0022246:4757-4776 Msa1398140:CDS 45.0%
GTGGTTGTTACTACTTACCG+CGG - tig0022246:4805-4824 Msa1398140:CDS 45.0%
TAGCACCTCTTAGTGCAAGA+TGG + tig0022246:4975-4994 None:intergenic 45.0%
!! TCTTGCACTAAGAGGTGCTA+CGG - tig0022246:4975-4994 Msa1398140:intron 45.0%
ACCTTCAACTGCTTTGGCAT+CGG + tig0022246:5051-5070 None:intergenic 45.0%
! GGTGGCTTATATTGACTAGC+TGG + tig0022246:5285-5304 None:intergenic 45.0%
CATGTTCTCCATCAGCCATC+TGG + tig0022246:3483-3502 None:intergenic 50.0%
GAAGAACAGCGATACAGCCT+CGG + tig0022246:3902-3921 None:intergenic 50.0%
GGAAACTTCCTGCATCATGG+AGG + tig0022246:4019-4038 None:intergenic 50.0%
GGAGGAAACTTCCTGCATCA+TGG + tig0022246:4022-4041 None:intergenic 50.0%
GATGCAGGAAGTTTCCTCCA+AGG - tig0022246:4023-4042 Msa1398140:CDS 50.0%
GATTCCTAAGGCCACAGAGA+AGG + tig0022246:4243-4262 None:intergenic 50.0%
!! GGAGATGTACCGATTGTAGG+AGG - tig0022246:4586-4605 Msa1398140:CDS 50.0%
AGTACGAACCGTGTTGTCTC+GGG + tig0022246:4667-4686 None:intergenic 50.0%
!! CTTGCACTAAGAGGTGCTAC+GGG - tig0022246:4976-4995 Msa1398140:intron 50.0%
ACCGATGCCAAAGCAGTTGA+AGG - tig0022246:5047-5066 Msa1398140:intron 50.0%
GATCGAAAGCTCCTTGCCTT+AGG + tig0022246:5230-5249 None:intergenic 50.0%
CATGTTCTCCATCAGCCATC+TGG + tig0022246:3483-3502 None:intergenic 50.0%
GAAGAACAGCGATACAGCCT+CGG + tig0022246:3902-3921 None:intergenic 50.0%
GGAAACTTCCTGCATCATGG+AGG + tig0022246:4019-4038 None:intergenic 50.0%
GGAGGAAACTTCCTGCATCA+TGG + tig0022246:4022-4041 None:intergenic 50.0%
GATGCAGGAAGTTTCCTCCA+AGG - tig0022246:4023-4042 Msa1398140:CDS 50.0%
GATTCCTAAGGCCACAGAGA+AGG + tig0022246:4243-4262 None:intergenic 50.0%
!! GGAGATGTACCGATTGTAGG+AGG - tig0022246:4586-4605 Msa1398140:CDS 50.0%
AGTACGAACCGTGTTGTCTC+GGG + tig0022246:4667-4686 None:intergenic 50.0%
!! CTTGCACTAAGAGGTGCTAC+GGG - tig0022246:4976-4995 Msa1398140:intron 50.0%
ACCGATGCCAAAGCAGTTGA+AGG - tig0022246:5047-5066 Msa1398140:intron 50.0%
GATCGAAAGCTCCTTGCCTT+AGG + tig0022246:5230-5249 None:intergenic 50.0%
GTTCTCCATCAGCCATCTGG+TGG + tig0022246:3480-3499 None:intergenic 55.0%
ACAGCCTCGGTGACCAAGAA+AGG + tig0022246:3889-3908 None:intergenic 55.0%
TGCAACGTTCTCTAGTCCCC+TGG - tig0022246:4174-4193 Msa1398140:CDS 55.0%
TCCTAAGGCCACAGAGAAGG+TGG + tig0022246:4240-4259 None:intergenic 55.0%
!! GCCGGAGATGTACCGATTGT+AGG - tig0022246:4583-4602 Msa1398140:CDS 55.0%
CACAACCACCCGAGACAACA+CGG - tig0022246:4656-4675 Msa1398140:intron 55.0%
AGTGGATCTTTGCGGCGTTG+AGG - tig0022246:4765-4784 Msa1398140:CDS 55.0%
! GATCTTTGCGGCGTTGAGGT+TGG - tig0022246:4769-4788 Msa1398140:CDS 55.0%
GTTCTCCATCAGCCATCTGG+TGG + tig0022246:3480-3499 None:intergenic 55.0%
ACAGCCTCGGTGACCAAGAA+AGG + tig0022246:3889-3908 None:intergenic 55.0%
TGCAACGTTCTCTAGTCCCC+TGG - tig0022246:4174-4193 Msa1398140:CDS 55.0%
TCCTAAGGCCACAGAGAAGG+TGG + tig0022246:4240-4259 None:intergenic 55.0%
!! GCCGGAGATGTACCGATTGT+AGG - tig0022246:4583-4602 Msa1398140:CDS 55.0%
CACAACCACCCGAGACAACA+CGG - tig0022246:4656-4675 Msa1398140:intron 55.0%
AGTGGATCTTTGCGGCGTTG+AGG - tig0022246:4765-4784 Msa1398140:CDS 55.0%
! GATCTTTGCGGCGTTGAGGT+TGG - tig0022246:4769-4788 Msa1398140:CDS 55.0%
GCCTCCTTTCTTGGTCACCG+AGG - tig0022246:3882-3901 Msa1398140:CDS 60.0%
GCCTCGGTGACCAAGAAAGG+AGG + tig0022246:3886-3905 None:intergenic 60.0%
GCCACCTTCTCTGTGGCCTT+AGG - tig0022246:4236-4255 Msa1398140:CDS 60.0%
ACGAACCGTGTTGTCTCGGG+TGG + tig0022246:4664-4683 None:intergenic 60.0%
GCCTCCTTTCTTGGTCACCG+AGG - tig0022246:3882-3901 Msa1398140:CDS 60.0%
GCCTCGGTGACCAAGAAAGG+AGG + tig0022246:3886-3905 None:intergenic 60.0%
GCCACCTTCTCTGTGGCCTT+AGG - tig0022246:4236-4255 Msa1398140:CDS 60.0%
ACGAACCGTGTTGTCTCGGG+TGG + tig0022246:4664-4683 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0022246 gene 3271 5380 3271 ID=Msa1398140;Name=Msa1398140
tig0022246 mRNA 3271 5380 3271 ID=Msa1398140-mRNA-1;Parent=Msa1398140;Name=Msa1398140-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|3|0|579
tig0022246 exon 5100 5380 5100 ID=Msa1398140-mRNA-1:exon:16483;Parent=Msa1398140-mRNA-1
tig0022246 exon 4726 4833 4726 ID=Msa1398140-mRNA-1:exon:16482;Parent=Msa1398140-mRNA-1
tig0022246 exon 3271 4621 3271 ID=Msa1398140-mRNA-1:exon:16481;Parent=Msa1398140-mRNA-1
tig0022246 CDS 5100 5380 5100 ID=Msa1398140-mRNA-1:cds;Parent=Msa1398140-mRNA-1
tig0022246 CDS 4726 4833 4726 ID=Msa1398140-mRNA-1:cds;Parent=Msa1398140-mRNA-1
tig0022246 CDS 3271 4621 3271 ID=Msa1398140-mRNA-1:cds;Parent=Msa1398140-mRNA-1
Gene Sequence

>Msa1398140

ATGATGACAGATGATGAACTTATACAGAAGCTAGAAGAGTTGACAATGGATGCAAAACATCACCAGTTGGAAACTCTTCGCTCAATCCTTCAACATAATGGTTCTGTTAGATATCTTCAATCTTTCAATAATAACAAAAGTGTTGATCCTGCTACTTTCACAAGTCTTGTTCCTTTGTCTTCCTATGATGATTACGTTGACTTTATCCACCAGATGGCTGATGGAGAACATGATCATCTTGATCTTCTCTCTGTTGATCCTCTTCTCTGCTTCTTCTATAGCTCAGGAACAACCTCCATGAAACCAAAACTGATCCCTTACTTTGATTCAAGCCTTTCAAAAGCTGCCTCCTTTCTTGGTCACCGAGGCTGTATCGCTGTTCTTCAAAGGAAGTTTCCTCCAAGGCCAAATGTAAACAAGACCCTATGGTTTCTCTATGCTGACAAAATTACTACTACAACTAAACGCGGCTTAAAGGTTATGGCAGCCTCTTCATACTCTTTACAAACTGGTAAGGTAACTCCTCAACAACTTGCAACGTTCTCTAGTCCCCTGGAAGTTATAATTGGATCTAATGTGGAACAACAAATGTATTGCCACCTTCTCTGTGGCCTTAGGAATCTTGATGTTATAGATGGAATTAGTACTCCTTATGCCATAGGTTTGATTAAAGCATTTAGTTTTTTGGAGTCCAAATGGGAGCAGCTATGTGTAGATCTTGATTGTGGATTTCCAAGTCATGAAATTTCAGATGAGGAAATGAGAGAAGCTGTAATCAACACTATTGGTGGTCCTCAACATGAATTGTCAAATAGAATAAGATTAGTTTGTGAAGGTAAGAATTGGGGTGGAATTGTACATAGATTGTTTCCGAATGTTCGGTTTATCAAGTGCGTTACAACAGGAAGCATGAAGCAGTACTATCAAAAACTTAAGTTTTATGCCGGAGATGTACCGATTGTAGGAGGAGATTACTTTGCTTCTGAGTGTTGTGTAGGTTTAAATTTAGACATAACACAACCACCCGAGACAACACGGTTCGTACTACTTCCTACTTTTGCCTACTTTGAGTTTCTTCCATTTGAGATGAATGAGAATGATGAGGATGTTGTTGGTGAGCAAACAGTGGATCTTTGCGGCGTTGAGGTTGGAAAGATGTATGAAGTGGTTGTTACTACTTACCGCGGATTTTATCGATACAAATTGGGCGATATAGTTAGAGTTGTTGGTTTCCACAATTCATCACCTCAAGTTGAATTTGTTATGAGAGCACCTAAGTCTTCAGCTGAGATTCTCAATGAGAAAGACTTGATTTCAGCAGTTGAAAATTTCCATCTTGCACTAAGAGGTGCTACGGGAATCAATTCAATTGAGATTGTTGAGTTTGCAAGTTTCTTGGATCAGGAACCGATGCCAAAGCAGTTGAAGGTATTTATAGAAGTAGAGGAAGTTCAAGAGGAGTCTAATAACTTGAAGGAATGGGTTAAAGTGTTTAAAAGTTGTATTTCCTCTCTTGAGAATGGTTTAGGAGCATTGTACAAGGTGCAGAGAGAAAAAGGTCATATAAGGAACTTAATGATAATTATCCTAAGGCAAGGAGCTTTCGATCAGTTATCAGATTTGGCTTTTAAGAATGGAACACCAGCTAGTCAATATAAGCCACCAAAGATTATAAGGAATCATGAAGTTGTCAAGTTCTTGGAAAAGTTTTCTTTTGTTAGAGTATCAATGGATGACTAA

Protein sequence

>Msa1398140

MMTDDELIQKLEELTMDAKHHQLETLRSILQHNGSVRYLQSFNNNKSVDPATFTSLVPLSSYDDYVDFIHQMADGEHDHLDLLSVDPLLCFFYSSGTTSMKPKLIPYFDSSLSKAASFLGHRGCIAVLQRKFPPRPNVNKTLWFLYADKITTTTKRGLKVMAASSYSLQTGKVTPQQLATFSSPLEVIIGSNVEQQMYCHLLCGLRNLDVIDGISTPYAIGLIKAFSFLESKWEQLCVDLDCGFPSHEISDEEMREAVINTIGGPQHELSNRIRLVCEGKNWGGIVHRLFPNVRFIKCVTTGSMKQYYQKLKFYAGDVPIVGGDYFASECCVGLNLDITQPPETTRFVLLPTFAYFEFLPFEMNENDEDVVGEQTVDLCGVEVGKMYEVVVTTYRGFYRYKLGDIVRVVGFHNSSPQVEFVMRAPKSSAEILNEKDLISAVENFHLALRGATGINSIEIVEFASFLDQEPMPKQLKVFIEVEEVQEESNNLKEWVKVFKSCISSLENGLGALYKVQREKGHIRNLMIIILRQGAFDQLSDLAFKNGTPASQYKPPKIIRNHEVVKFLEKFSFVRVSMDD*