AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0057990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0057990 MtrunA17_Chr1g0202341 74.852 676 168 1 4 679 12 685 0.0 1073
Msa0057990 MtrunA17_Chr5g0448761 43.701 643 342 6 36 666 53 687 0.0 559
Msa0057990 MtrunA17_Chr1g0207551 35.910 621 385 5 41 660 32 640 1.54e-131 410
Msa0057990 MtrunA17_Chr5g0440451 34.837 643 381 8 42 666 42 664 1.93e-131 413
Msa0057990 MtrunA17_Chr5g0441581 35.964 659 385 13 20 664 2 637 9.44e-131 404
Msa0057990 MtrunA17_Chr5g0448511 40.733 464 267 3 206 666 1 459 5.20e-129 395
Msa0057990 MtrunA17_Chr2g0296781 34.207 687 393 13 47 710 1 651 1.19e-124 389
Msa0057990 MtrunA17_Chr3g0080351 34.281 633 369 7 41 659 74 673 2.04e-122 387
Msa0057990 MtrunA17_Chr2g0329031 33.758 628 393 10 42 667 13 619 2.54e-121 381
Msa0057990 MtrunA17_Chr3g0118611 38.023 526 302 6 218 724 118 638 7.33e-120 378
Msa0057990 MtrunA17_Chr2g0287061 35.443 632 344 11 41 663 181 757 1.02e-116 371
Msa0057990 MtrunA17_Chr2g0287061 27.586 174 93 5 17 178 9 161 3.60e-15 79.7
Msa0057990 MtrunA17_Chr2g0324011 33.916 572 366 6 37 603 4 568 1.41e-113 356
Msa0057990 MtrunA17_Chr2g0291581 33.333 660 391 13 23 663 50 679 2.13e-113 358
Msa0057990 MtrunA17_Chr8g0363841 32.170 659 412 10 31 664 3 651 1.04e-112 357
Msa0057990 MtrunA17_Chr6g0477261 36.101 554 331 9 165 710 2 540 1.70e-111 353
Msa0057990 MtrunA17_Chr2g0287651 30.342 702 443 10 47 738 79 744 8.99e-106 344
Msa0057990 MtrunA17_Chr1g0196541 34.574 564 344 9 47 598 1 551 2.39e-104 336
Msa0057990 MtrunA17_Chr1g0203721 31.040 625 422 6 46 666 66 685 2.46e-104 340
Msa0057990 MtrunA17_Chr1g0198761 30.210 715 458 12 44 742 48 737 3.01e-103 334
Msa0057990 MtrunA17_Chr6g0458391 32.920 565 351 6 43 603 225 765 1.13e-101 330
Msa0057990 MtrunA17_Chr6g0458391 27.749 191 126 4 23 204 71 258 6.49e-13 72.4
Msa0057990 MtrunA17_Chr3g0082121 31.100 627 412 9 22 645 22 631 1.23e-98 320
Msa0057990 MtrunA17_Chr2g0291591 33.465 508 328 6 42 547 63 562 1.25e-93 303
Msa0057990 MtrunA17_Chr1g0203051 29.642 587 399 6 11 591 44 622 2.90e-90 296
Msa0057990 MtrunA17_Chr2g0294841 26.823 727 479 15 41 738 43 745 1.25e-80 273
Msa0057990 MtrunA17_Chr2g0276841 29.022 634 415 15 43 663 70 681 6.74e-80 270
Msa0057990 MtrunA17_Chr2g0290391 29.148 669 434 16 12 663 21 666 3.37e-76 260
Msa0057990 MtrunA17_Chr1g0164591 36.842 304 183 2 134 437 14 308 6.42e-67 224
Msa0057990 MtrunA17_Chr5g0431001 31.847 471 299 10 5 456 16 483 2.28e-65 226
Msa0057990 MtrunA17_Chr7g0258861 37.113 291 178 4 35 322 2 290 8.90e-61 207
Msa0057990 MtrunA17_Chr3g0077241 76.087 92 18 2 6 96 1 89 2.30e-39 141
Msa0057990 MtrunA17_Chr4g0052331 53.684 95 44 0 1 95 1 95 8.40e-28 107
Msa0057990 MtrunA17_Chr2g0308841 28.054 221 152 3 383 599 6 223 1.58e-24 103
Msa0057990 MtrunA17_Chr2g0329361 35.099 151 86 3 5 148 22 167 4.98e-23 99.4
Msa0057990 MtrunA17_Chr1g0149131 32.727 110 74 0 323 432 1 110 8.98e-20 85.9
Msa0057990 MtrunA17_Chr2g0329421 30.263 152 83 3 42 173 26 174 3.73e-19 86.7
Msa0057990 MtrunA17_Chr4g0033611 28.931 159 89 3 36 173 69 224 8.07e-18 84.0
Msa0057990 MtrunA17_Chr3g0078041 36.842 114 67 4 42 152 49 160 2.57e-16 79.0
Msa0057990 MtrunA17_Chr7g0233911 36.449 107 62 3 42 145 33 136 2.72e-15 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0057990 AT4G38180.1 41.568 676 370 9 2 659 21 689 0.0 538
Msa0057990 AT4G15090.1 34.816 652 408 8 37 681 45 686 4.12e-136 422
Msa0057990 AT4G15090.5 34.816 652 408 8 37 681 45 686 4.12e-136 422
Msa0057990 AT4G15090.3 34.816 652 408 8 37 681 45 686 4.12e-136 422
Msa0057990 AT4G15090.2 34.816 652 408 8 37 681 45 686 4.12e-136 422
Msa0057990 AT4G15090.4 34.816 652 408 8 37 681 45 686 4.12e-136 422
Msa0057990 AT2G27110.2 36.000 625 360 9 42 663 48 635 1.07e-127 401
Msa0057990 AT2G27110.1 36.000 625 360 9 42 663 48 635 1.07e-127 401
Msa0057990 AT3G06250.2 34.913 633 340 11 42 663 189 760 8.45e-126 394
Msa0057990 AT3G06250.2 33.962 106 54 2 41 145 26 116 1.99e-14 77.8
Msa0057990 AT3G06250.1 34.913 633 340 11 42 663 189 760 8.45e-126 394
Msa0057990 AT3G06250.1 33.962 106 54 2 41 145 26 116 1.99e-14 77.8
Msa0057990 AT3G06250.3 34.913 633 340 11 42 663 189 760 8.45e-126 394
Msa0057990 AT3G06250.3 33.962 106 54 2 41 145 26 116 1.99e-14 77.8
Msa0057990 AT5G18960.2 35.118 635 339 11 42 663 210 784 1.33e-124 391
Msa0057990 AT5G18960.2 28.906 128 75 2 41 167 41 153 4.79e-14 76.6
Msa0057990 AT5G18960.1 35.118 635 339 11 42 663 210 784 1.33e-124 391
Msa0057990 AT5G18960.1 28.906 128 75 2 41 167 41 153 4.79e-14 76.6
Msa0057990 AT2G27110.3 40.135 446 261 2 218 663 51 490 2.56e-117 370
Msa0057990 AT3G22170.2 30.709 635 395 6 39 660 66 668 5.56e-112 360
Msa0057990 AT3G22170.1 30.709 635 395 6 39 660 66 668 5.56e-112 360
Msa0057990 AT1G76320.3 32.039 618 397 8 47 662 1 597 3.26e-109 348
Msa0057990 AT1G76320.2 32.039 618 397 8 47 662 1 597 1.11e-108 348
Msa0057990 AT1G76320.1 32.039 618 397 8 47 662 1 597 1.42e-108 348
Msa0057990 AT1G76320.4 32.039 618 397 8 47 662 1 597 1.42e-108 348
Msa0057990 AT4G38170.1 36.250 480 292 6 222 698 21 489 3.55e-106 336
Msa0057990 AT1G52520.1 29.542 677 419 12 11 667 61 699 1.98e-101 328
Msa0057990 AT2G32250.5 31.200 625 373 7 46 667 41 611 7.22e-99 323
Msa0057990 AT2G32250.6 31.200 625 373 7 46 667 41 611 1.67e-98 323
Msa0057990 AT2G32250.1 31.200 625 373 7 46 667 41 611 1.67e-98 323
Msa0057990 AT2G32250.3 31.200 625 373 7 46 667 41 611 1.67e-98 323
Msa0057990 AT2G32250.2 31.200 625 373 7 46 667 41 611 1.81e-98 323
Msa0057990 AT2G32250.4 31.200 625 373 7 46 667 41 611 1.81e-98 323
Msa0057990 AT2G32250.8 31.090 624 373 7 47 667 1 570 8.12e-98 320
Msa0057990 AT2G32250.7 31.090 624 373 7 47 667 1 570 9.93e-98 320
Msa0057990 AT4G19990.3 30.455 660 401 11 41 684 19 636 2.05e-97 319
Msa0057990 AT4G19990.4 30.455 660 401 11 41 684 19 636 2.05e-97 319
Msa0057990 AT4G19990.5 30.455 660 401 11 41 684 19 636 2.69e-97 318
Msa0057990 AT4G19990.6 30.455 660 401 11 41 684 19 636 3.19e-97 319
Msa0057990 AT4G19990.2 30.455 660 401 11 41 684 19 636 3.19e-97 319
Msa0057990 AT4G19990.7 30.455 660 401 11 41 684 33 650 3.22e-97 318
Msa0057990 AT4G19990.1 31.478 575 347 9 115 684 47 579 1.28e-90 299
Msa0057990 AT1G80010.1 28.761 678 441 18 12 672 73 725 7.76e-89 295
Msa0057990 AT5G28530.1 28.795 639 412 15 43 657 55 674 4.41e-78 265
Msa0057990 AT5G28530.3 28.482 639 410 15 43 657 55 670 1.96e-76 261
Msa0057990 AT5G28530.2 28.482 639 410 15 43 657 55 670 1.96e-76 261
Msa0057990 AT1G10240.2 28.855 655 425 17 27 658 25 661 7.39e-76 259
Msa0057990 AT1G10240.1 28.855 655 425 17 27 658 25 661 7.39e-76 259
Msa0057990 AT5G28530.4 25.275 637 374 19 43 657 55 611 1.73e-49 184
Msa0057990 AT5G28530.5 24.961 637 372 19 43 657 55 607 7.11e-48 180
Msa0057990 AT3G59470.3 38.532 109 63 2 42 149 69 174 7.54e-20 90.1
Msa0057990 AT3G59470.1 38.532 109 63 2 42 149 69 174 7.54e-20 90.1
Msa0057990 AT3G59470.2 38.532 109 63 2 42 149 81 186 1.12e-19 90.1
Msa0057990 AT3G07500.1 35.938 128 75 4 41 165 31 154 9.28e-16 77.4
Msa0057990 AT2G43280.1 31.538 130 84 4 27 153 6 133 2.77e-15 75.9
Msa0057990 AT4G12850.2 34.286 105 63 2 42 145 10 109 7.30e-15 72.8
Msa0057990 AT4G12850.4 35.238 105 62 3 42 145 10 109 1.00e-14 72.4
Msa0057990 AT4G12850.1 35.238 105 62 2 42 145 10 109 1.30e-14 73.2
Msa0057990 AT2G43280.2 32.323 99 62 4 58 153 2 98 4.82e-11 62.8

Find 152 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTCTGCAATAAATATT+TGG 0.060470 1_2:+14223411 None:intergenic
CCACCCCTACTTAGCATTTA+TGG 0.135086 1_2:+14223175 None:intergenic
TGCACTTCTGGCGTGATTTC+AGG 0.168073 1_2:-14221694 Msa0057990:three_prime_UTR
AGAATGGCTTACAAATATTT+TGG 0.184037 1_2:-14224196 Msa0057990:CDS
TCGGCAAAATTATCCCTTAT+TGG 0.193753 1_2:+14221761 None:intergenic
TTATACAACTTTACTATAAA+TGG 0.200880 1_2:+14221334 None:intergenic
GATTTCTCTGATGTGATTCT+AGG 0.204971 1_2:-14221724 Msa0057990:three_prime_UTR
TCTACACCATTCGAGGAAAA+TGG 0.218597 1_2:-14223724 Msa0057990:CDS
TTCATTATTTAATAGTATTA+TGG 0.222727 1_2:-14222414 Msa0057990:CDS
CTAGGCTTTGGATGCACTTC+TGG 0.230580 1_2:-14221706 Msa0057990:three_prime_UTR
GTAAATTAGCAAATTGCTTT+TGG 0.235893 1_2:-14224234 Msa0057990:CDS
AAAAGTGTTCAGGATATTTC+AGG 0.242179 1_2:-14223450 Msa0057990:CDS
ATTGATGTGCTTCATGATTC+TGG 0.246659 1_2:-14224469 Msa0057990:CDS
CATTCCTTCAAAGGGCTCTA+AGG 0.261818 1_2:+14224852 None:intergenic
TATTCATACTTTCACTCCTT+TGG 0.266644 1_2:+14223654 None:intergenic
CGCTATGTTCATGATAGATT+TGG 0.274190 1_2:+14223867 None:intergenic
ATTCATACTTTCACTCCTTT+GGG 0.296462 1_2:+14223655 None:intergenic
CTGATGACTTTGATTCTGAT+TGG 0.300769 1_2:-14223799 Msa0057990:CDS
TCTGGCGTGATTTCAGGTTT+TGG 0.301040 1_2:-14221688 Msa0057990:three_prime_UTR
TGATGACTTTGATTCTGATT+GGG 0.310601 1_2:-14223798 Msa0057990:CDS
ATATTGCAATTCAAGCTTTA+CGG 0.318900 1_2:-14222340 Msa0057990:CDS
ATCCTTCCATTTCTTATTGA+AGG 0.322059 1_2:-14225534 Msa0057990:intron
CGAAGATGCTGTGAACTTCT+TGG 0.326106 1_2:+14224529 None:intergenic
TTTCTCTGCAATAAATATTT+GGG 0.327509 1_2:+14223412 None:intergenic
TCTGATGTGATTCTAGGCTT+TGG 0.327651 1_2:-14221718 Msa0057990:three_prime_UTR
AATAATTAATAACATCTTGT+TGG 0.331163 1_2:+14224377 None:intergenic
TGAAAAGTCACATGATAGTT+AGG 0.341747 1_2:+14223332 None:intergenic
AAAGTGCATGGACGACCTTT+AGG 0.347184 1_2:+14222185 None:intergenic
GAAGATGCTGTGAACTTCTT+GGG 0.347598 1_2:+14224530 None:intergenic
TCCATTGCAATAACTACAAC+TGG 0.351484 1_2:+14222121 None:intergenic
TGGAGGATCACACAAGTTTA+TGG 0.352054 1_2:+14222217 None:intergenic
ATGCCCTTTGTTCCATTCAC+TGG 0.364662 1_2:-14224127 Msa0057990:CDS
CAATGTTAAAGCTTCTAGTT+TGG 0.368597 1_2:-14221923 Msa0057990:CDS
TATTTATTTGTTAAGTATGT+TGG 0.372145 1_2:+14224154 None:intergenic
TTTACGAATGAAAGGCAGTT+TGG 0.374955 1_2:-14222165 Msa0057990:CDS
TTCTAGTTTGGTTGATTAAG+AGG 0.375412 1_2:-14221911 Msa0057990:intron
TTTATACAAGAAAAGTGTTC+AGG 0.375460 1_2:-14223460 Msa0057990:CDS
GATTTATCAAACTCTTCATT+TGG 0.382353 1_2:+14222278 None:intergenic
TTGTCGCATGTTTGAGTTTG+TGG 0.384532 1_2:-14223282 Msa0057990:CDS
AATTGTCAGTTGAAGAATCC+TGG 0.396913 1_2:-14224289 Msa0057990:CDS
TCCATACCTTCAATAAGAAA+TGG 0.399424 1_2:+14225528 None:intergenic
AAGTGCATGGACGACCTTTA+GGG 0.405059 1_2:+14222186 None:intergenic
TGTATTAAACGTATTCATAA+AGG 0.409882 1_2:-14223243 Msa0057990:CDS
GGGAAAATAGTACATGATTA+TGG 0.411615 1_2:+14224551 None:intergenic
AATCACAAAACTTGATCAAT+TGG 0.412422 1_2:-14222312 Msa0057990:CDS
TACCTTTGGTGCGGCTGTGC+GGG 0.417771 1_2:-14221608 Msa0057990:three_prime_UTR
TGAATGGAACAAAGGGCATT+AGG 0.418217 1_2:+14224131 None:intergenic
CGCACCAAAGGTACAAAAGC+TGG 0.418500 1_2:+14221618 None:intergenic
TTGTGAAAATGAAGGAGAAC+AGG 0.419556 1_2:+14225605 None:intergenic
TACATCATCTGAGCCATTCA+TGG 0.419748 1_2:+14224930 None:intergenic
TTGTTTGGTTGCTACGTACT+TGG 0.423904 1_2:-14224036 Msa0057990:CDS
AGTCATCAGAAGTGATAGTT+TGG 0.427220 1_2:+14223813 None:intergenic
GCAACAGAGAGTTGCAGATT+CGG 0.435446 1_2:+14225557 None:intergenic
TGCATCAATTGAAGATGTAA+AGG 0.436857 1_2:-14224824 Msa0057990:CDS
GTGCTTCATGATTCTGGTAT+AGG 0.438869 1_2:-14224463 Msa0057990:CDS
ACTTTCACTCCTTTGGGTGG+TGG 0.440297 1_2:+14223661 None:intergenic
TGTAGTTATTGCAATGGAAA+AGG 0.442086 1_2:-14222116 Msa0057990:CDS
GGCTCTAAGGGGAGCTCTGA+TGG 0.445219 1_2:+14224865 None:intergenic
CATCTACATAACAGGATTGT+GGG 0.453044 1_2:-14225000 Msa0057990:intron
TTTAGGTGTGATATCATCAA+TGG 0.453788 1_2:-14221961 Msa0057990:intron
CTCCCCTTAGAGCCCTTTGA+AGG 0.456460 1_2:-14224856 Msa0057990:CDS
GGTTGATTCAAGGTCTAGAA+TGG 0.460592 1_2:-14224212 Msa0057990:CDS
TATTTCAGGATGAGTTGGTT+GGG 0.463690 1_2:-14223436 Msa0057990:CDS
AAGAAGATCTACACCATTCG+AGG 0.468875 1_2:-14223731 Msa0057990:CDS
CTACACCATTCGAGGAAAAT+GGG 0.470377 1_2:-14223723 Msa0057990:CDS
AGTGGTGGTGTTGATAATGT+TGG 0.474266 1_2:-14224406 Msa0057990:CDS
CTTAGAGCCCTTTGAAGGAA+TGG 0.476103 1_2:-14224851 Msa0057990:CDS
CATGAACATACAACCATGAA+TGG 0.476240 1_2:-14224943 Msa0057990:CDS
GATGACTTTGATTCTGATTG+GGG 0.477884 1_2:-14223797 Msa0057990:CDS
ACCAGTTGTAGTTATTGCAA+TGG 0.478462 1_2:-14222122 Msa0057990:CDS
CAGGATATTTCAGGATGAGT+TGG 0.484717 1_2:-14223441 Msa0057990:CDS
TGCAAACTCCATTCCTTCAA+AGG 0.485592 1_2:+14224843 None:intergenic
TGTCGCATGTTTGAGTTTGT+GGG 0.487042 1_2:-14223281 Msa0057990:CDS
CAAACTAGAAGCTTTAACAT+TGG 0.487651 1_2:+14221924 None:intergenic
AAATCCACCACCTTTGACTT+CGG 0.488240 1_2:+14221742 None:intergenic
ATTCCTTCAAAGGGCTCTAA+GGG 0.488264 1_2:+14224853 None:intergenic
CTCAATATGTTCTAAGCCGA+TGG 0.491066 1_2:-14223199 Msa0057990:CDS
TTAAAGTAAAATGTTAAAAG+AGG 0.495012 1_2:+14221443 None:intergenic
ACGAGTTGCAAGATAACAAA+TGG 0.498356 1_2:-14223757 Msa0057990:CDS
ATTGTCAGTTGAAGAATCCT+GGG 0.500058 1_2:-14224288 Msa0057990:CDS
TAGATTTGGTTCAAGTACTC+TGG 0.502715 1_2:+14223881 None:intergenic
TTACTAGGAGGGGATCTGTT+CGG 0.504637 1_2:-14221557 Msa0057990:three_prime_UTR
TTTGAAGCCTCTTCTTCCAT+GGG 0.505212 1_2:+14223485 None:intergenic
TCAAGAGATTCTTTGTTCAA+AGG 0.507548 1_2:-14224713 Msa0057990:CDS
GCAAACTCCATTCCTTCAAA+GGG 0.507732 1_2:+14224844 None:intergenic
TTTGCCGAAGTCAAAGGTGG+TGG 0.512830 1_2:-14221746 Msa0057990:three_prime_UTR
CAATAATGATGATTCACCTC+TGG 0.513933 1_2:+14223929 None:intergenic
TCAGATTGTGTTTACTAGGA+GGG 0.514506 1_2:-14221568 Msa0057990:three_prime_UTR
ACTTAGCATTTATGGTCCAT+CGG 0.519316 1_2:+14223183 None:intergenic
AAACTCTGACGTACATAAGA+AGG 0.521777 1_2:+14223698 None:intergenic
AGAACGAATGGTGTTGTGAT+TGG 0.522138 1_2:-14224736 Msa0057990:CDS
CCTCCACGTGCGGTCCCTAA+AGG 0.522617 1_2:-14222200 Msa0057990:CDS
TGTATCACAAACTTGCTCAA+TGG 0.525322 1_2:+14223599 None:intergenic
GTCTGGTCATCGGAGACTTT+AGG 0.525728 1_2:+14222239 None:intergenic
CATACTTTCACTCCTTTGGG+TGG 0.526942 1_2:+14223658 None:intergenic
TCTGCGTACTTTATATCCCA+TGG 0.529545 1_2:-14223501 Msa0057990:CDS
ACTCCAGTGAATGGAACAAA+GGG 0.535906 1_2:+14224124 None:intergenic
ACGTACTTGGTTAGAAGCAA+TGG 0.537041 1_2:-14224023 Msa0057990:CDS
CAGATTGTGTTTACTAGGAG+GGG 0.539634 1_2:-14221567 Msa0057990:three_prime_UTR
TCTCTTGAACTATCTGAAAG+AGG 0.540310 1_2:-14222386 Msa0057990:CDS
AGAGATTCTTTGTTCAAAGG+AGG 0.541828 1_2:-14224710 Msa0057990:CDS
TTTATATCCCATGGAAGAAG+AGG 0.541904 1_2:-14223492 Msa0057990:CDS
CAAGTTTATGGTCTGGTCAT+CGG 0.542082 1_2:+14222229 None:intergenic
TGAATCATCATTATTGTATG+TGG 0.542391 1_2:-14223922 Msa0057990:CDS
TTGGACATCTACGTTTGTTG+TGG 0.543214 1_2:+14222093 None:intergenic
TGCAATTCAAGCTTTACGGA+AGG 0.544992 1_2:-14222336 Msa0057990:CDS
ATATTTCAGGATGAGTTGGT+TGG 0.547184 1_2:-14223437 Msa0057990:CDS
GTACCTTTGGTGCGGCTGTG+CGG 0.547232 1_2:-14221609 Msa0057990:three_prime_UTR
ACATCTACATAACAGGATTG+TGG 0.547572 1_2:-14225001 Msa0057990:intron
GAGATTCTTTGTTCAAAGGA+GGG 0.548544 1_2:-14224709 Msa0057990:CDS
TATTTCTAATGCAGTTGCAA+AGG 0.550472 1_2:-14223957 Msa0057990:CDS
CCTTTCATTCGTAAAGTGCA+TGG 0.557537 1_2:+14222173 None:intergenic
GATCACACAAGTTTATGGTC+TGG 0.557810 1_2:+14222222 None:intergenic
TTCAGATTGTGTTTACTAGG+AGG 0.562996 1_2:-14221569 Msa0057990:three_prime_UTR
GCACCAAAGGTACAAAAGCT+GGG 0.568721 1_2:+14221619 None:intergenic
CGGCTTAGAACATATTGAGA+AGG 0.582615 1_2:+14223203 None:intergenic
GTCCAAGTTTAAAACATGGA+AGG 0.582831 1_2:-14222076 Msa0057990:intron
AACTCCAGTGAATGGAACAA+AGG 0.585483 1_2:+14224123 None:intergenic
TGATGATTAACTCCAGTGAA+TGG 0.587906 1_2:+14224115 None:intergenic
CCATGCACTTTACGAATGAA+AGG 0.589683 1_2:-14222173 Msa0057990:CDS
TTAAAGTACACGATCAAACA+AGG 0.591318 1_2:-14224645 Msa0057990:CDS
GTTACTAAATCAAGAACGAA+TGG 0.591678 1_2:-14224748 Msa0057990:CDS
AAGATGCTGTGAACTTCTTG+GGG 0.593260 1_2:+14224531 None:intergenic
ATGTAAAGGATTACTACGTA+AGG 0.595028 1_2:-14224810 Msa0057990:CDS
GGCTTAGAACATATTGAGAA+GGG 0.595706 1_2:+14223204 None:intergenic
TACCTTCAATAAGAAATGGA+AGG 0.597326 1_2:+14225532 None:intergenic
GCATTTCAAATGGACGCAGA+AGG 0.597955 1_2:-14224256 Msa0057990:CDS
TCTAAGGGGAGCTCTGATGG+CGG 0.601475 1_2:+14224868 None:intergenic
GCAATTGAAGACCTCGAGGA+AGG 0.603885 1_2:-14222458 Msa0057990:CDS
GGATATAAAGTACGCAGAAG+TGG 0.606925 1_2:+14223506 None:intergenic
CTCTGTTTCTGCCTTCCTCG+AGG 0.612225 1_2:+14222447 None:intergenic
AACCCGCACAGCCGCACCAA+AGG 0.615562 1_2:+14221606 None:intergenic
CAGAGCGGTTGTGAAAATGA+AGG 0.616006 1_2:+14225597 None:intergenic
GAGAGAAGAATGTCAAGACA+AGG 0.616684 1_2:-14223538 Msa0057990:CDS
GAACAGGGTAACTGATGTTG+AGG 0.619611 1_2:+14225621 None:intergenic
CGACCTTTAGGGACCGCACG+TGG 0.624526 1_2:+14222197 None:intergenic
GTTTGTGATACAGTATGAGA+AGG 0.624921 1_2:-14223588 Msa0057990:CDS
GTACACGATCAAACAAGGGT+AGG 0.637469 1_2:-14224640 Msa0057990:CDS
CTGGAATGTCCACCACCCAA+AGG 0.639739 1_2:-14223670 Msa0057990:CDS
AGATGTCCAAGTTTAAAACA+TGG 0.643966 1_2:-14222080 Msa0057990:CDS
ACTTGGTTAGAAGCAATGGA+TGG 0.652582 1_2:-14224019 Msa0057990:CDS
TCTTGACGCACGTTATAACA+AGG 0.672022 1_2:-14223564 Msa0057990:CDS
TTCCTTCAAAGGGCTCTAAG+GGG 0.687755 1_2:+14224854 None:intergenic
AATAGATGGAAATTCACACC+AGG 0.694517 1_2:+14221658 None:intergenic
TGTGAAAATGAAGGAGAACA+GGG 0.696875 1_2:+14225606 None:intergenic
CCTTTAGGGACCGCACGTGG+AGG 0.703909 1_2:+14222200 None:intergenic
AATTGCAATTGAAGACCTCG+AGG 0.709068 1_2:-14222462 Msa0057990:CDS
CTTGTGTGATCCTCCACGTG+CGG 0.710705 1_2:-14222210 Msa0057990:CDS
TAAAGTACACGATCAAACAA+GGG 0.712268 1_2:-14224644 Msa0057990:CDS
GTGTTATGTACTGAGAGTGG+TGG 0.725945 1_2:-14224421 Msa0057990:CDS
TCAGTGTTATGTACTGAGAG+TGG 0.733515 1_2:-14224424 Msa0057990:CDS
GTCGAGAATCAAGTACAGAG+CGG 0.751791 1_2:+14225582 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATATAAGTAAAAAAG+TGG + chr1_2:14221891-14221910 None:intergenic 10.0%
!!! TTCTTTTTTCAAATTTTTTT+TGG + chr1_2:14222290-14222309 None:intergenic 10.0%
!! AAAAATTTGAAAAAAGAAAA+TGG - chr1_2:14222292-14222311 Msa0057990:CDS 10.0%
!!! AAGTATGAATAAATTTTTTA+AGG - chr1_2:14223323-14223342 Msa0057990:CDS 10.0%
!!! AGTATGAATAAATTTTTTAA+GGG - chr1_2:14223324-14223343 Msa0057990:CDS 10.0%
!! TGATTTACTTAATTTATTAT+CGG + chr1_2:14223981-14224000 None:intergenic 10.0%
!! AAAAGATTGAAAATAAAAAT+AGG + chr1_2:14224096-14224115 None:intergenic 10.0%
!! TTCATTATTTAATAGTATTA+TGG - chr1_2:14224551-14224570 Msa0057990:CDS 10.0%
!!! TAACATTTTACTTTAATATA+AGG - chr1_2:14225529-14225548 Msa0057990:intron 10.0%
!! ACAATAATATGCTATTATAA+AGG + chr1_2:14221837-14221856 None:intergenic 15.0%
!! CATATATATAAGTAAAAAAG+TGG + chr1_2:14221923-14221942 None:intergenic 15.0%
!! AATAATTAATAACATCTTGT+TGG + chr1_2:14222591-14222610 None:intergenic 15.0%
!!! TATTTATTTGTTAAGTATGT+TGG + chr1_2:14222814-14222833 None:intergenic 15.0%
!! GATTTACTTAATTTATTATC+GGG + chr1_2:14223980-14223999 None:intergenic 15.0%
!! AAAAAAATATCAAAAATCCA+TGG - chr1_2:14224299-14224318 Msa0057990:CDS 15.0%
!! AAAAAATATCAAAAATCCAT+GGG - chr1_2:14224300-14224319 Msa0057990:CDS 15.0%
!! CTTGTAACAATAATATATTT+AGG + chr1_2:14225129-14225148 None:intergenic 15.0%
!!! CTTTTATTGTTTTTCTTTTT+AGG - chr1_2:14225486-14225505 Msa0057990:intron 15.0%
!! TTAAAGTAAAATGTTAAAAG+AGG + chr1_2:14225525-14225544 None:intergenic 15.0%
!!! TATTCACAATCTTTGTTTTT+TGG - chr1_2:14221479-14221498 Msa0057990:three_prime_UTR 20.0%
!! TGAAAAAACCATAATAATAG+AGG + chr1_2:14221687-14221706 None:intergenic 20.0%
!!! AAAACTAAAACCTTTTTTCT+TGG + chr1_2:14222185-14222204 None:intergenic 20.0%
!! AGACAAAAACAATTAGAAAA+TGG - chr1_2:14222622-14222641 Msa0057990:intron 20.0%
!!! GTTTTTTTATGCATTTCAAA+TGG - chr1_2:14222699-14222718 Msa0057990:intron 20.0%
!!! TAAATTAGCAAATTGCTTTT+GGG - chr1_2:14222732-14222751 Msa0057990:intron 20.0%
!! TTTCTCTGCAATAAATATTT+GGG + chr1_2:14223556-14223575 None:intergenic 20.0%
!!! AATTTCATGAATTTTGTATG+TGG + chr1_2:14223601-14223620 None:intergenic 20.0%
!! TGTATTAAACGTATTCATAA+AGG - chr1_2:14223722-14223741 Msa0057990:CDS 20.0%
!! ACATCATAAAACATATCATA+TGG - chr1_2:14224153-14224172 Msa0057990:CDS 20.0%
!! TAAAAATCTTGAATTTCCTA+TGG - chr1_2:14224182-14224201 Msa0057990:CDS 20.0%
!!! GTTTAAAAGTTGAAGTTTTT+TGG - chr1_2:14224248-14224267 Msa0057990:CDS 20.0%
!!! TTTTTTCTTTCTTAGCATTA+GGG + chr1_2:14224476-14224495 None:intergenic 20.0%
!!! TATTGTTGTTATTGTTTTAC+TGG - chr1_2:14225077-14225096 Msa0057990:intron 20.0%
! CAAATATCTAAAAGCTTATC+AGG + chr1_2:14221612-14221631 None:intergenic 25.0%
! TACATCAAGAAAAATGAAGA+TGG - chr1_2:14222364-14222383 Msa0057990:CDS 25.0%
! ACATCAAGAAAAATGAAGAT+GGG - chr1_2:14222365-14222384 Msa0057990:CDS 25.0%
!!! AATAAGTTTTTTTTGCACTG+GGG + chr1_2:14222479-14222498 None:intergenic 25.0%
!!! CAATAAGTTTTTTTTGCACT+GGG + chr1_2:14222480-14222499 None:intergenic 25.0%
!!! TCAATAAGTTTTTTTTGCAC+TGG + chr1_2:14222481-14222500 None:intergenic 25.0%
!! GTAAATTAGCAAATTGCTTT+TGG - chr1_2:14222731-14222750 Msa0057990:intron 25.0%
!! AGAATGGCTTACAAATATTT+TGG - chr1_2:14222769-14222788 Msa0057990:intron 25.0%
!!! TTACAAATATTTTGGTGATG+TGG - chr1_2:14222777-14222796 Msa0057990:intron 25.0%
!! AACCAAAAAGTATAGATTGT+TGG + chr1_2:14222876-14222895 None:intergenic 25.0%
!! TGATCAGTGATAATAGTTTT+AGG + chr1_2:14222979-14222998 None:intergenic 25.0%
! TGAATCATCATTATTGTATG+TGG - chr1_2:14223043-14223062 Msa0057990:intron 25.0%
!!! TTTATACAAGAAAAGTGTTC+AGG - chr1_2:14223505-14223524 Msa0057990:CDS 25.0%
! CTTTCTCTGCAATAAATATT+TGG + chr1_2:14223557-14223576 None:intergenic 25.0%
! TTTGACTACCCATTATTATA+TGG - chr1_2:14223909-14223928 Msa0057990:CDS 25.0%
! TACCCATTATTATATGGATA+TGG - chr1_2:14223915-14223934 Msa0057990:CDS 25.0%
! GTCCATATCCATATAATAAT+GGG + chr1_2:14223920-14223939 None:intergenic 25.0%
! TGTCCATATCCATATAATAA+TGG + chr1_2:14223921-14223940 None:intergenic 25.0%
! CTTAATTTATTATCGGGTAT+GGG + chr1_2:14223974-14223993 None:intergenic 25.0%
! ACTTAATTTATTATCGGGTA+TGG + chr1_2:14223975-14223994 None:intergenic 25.0%
! TAAAGTTGTTACCTTATTGA+AGG - chr1_2:14224034-14224053 Msa0057990:CDS 25.0%
!! CCTTATTGAAGGAAATTTTA+CGG - chr1_2:14224045-14224064 Msa0057990:CDS 25.0%
! ATAAAAATAGGTTGTTAACG+AGG + chr1_2:14224084-14224103 None:intergenic 25.0%
! ATAAATCGTACATAATCCAT+AGG + chr1_2:14224201-14224220 None:intergenic 25.0%
!!! CTTTTTTCTTTCTTAGCATT+AGG + chr1_2:14224477-14224496 None:intergenic 25.0%
! GCTAAGAAAGAAAAAAGTAA+AGG - chr1_2:14224480-14224499 Msa0057990:CDS 25.0%
! ATATTGCAATTCAAGCTTTA+CGG - chr1_2:14224625-14224644 Msa0057990:CDS 25.0%
! AATCACAAAACTTGATCAAT+TGG - chr1_2:14224653-14224672 Msa0057990:CDS 25.0%
! GATTTATCAAACTCTTCATT+TGG + chr1_2:14224690-14224709 None:intergenic 25.0%
!!! TGAATTTCCATCTATTTTTC+TGG - chr1_2:14225314-14225333 Msa0057990:intron 25.0%
!!! GGTTTTGATATTTGATTTGT+AGG - chr1_2:14225429-14225448 Msa0057990:intron 25.0%
ATCCTTCCATTTCTTATTGA+AGG - chr1_2:14221431-14221450 Msa0057990:three_prime_UTR 30.0%
TACCTTCAATAAGAAATGGA+AGG + chr1_2:14221436-14221455 None:intergenic 30.0%
TCCATTTCTTATTGAAGGTA+TGG - chr1_2:14221436-14221455 Msa0057990:three_prime_UTR 30.0%
TCCATACCTTCAATAAGAAA+TGG + chr1_2:14221440-14221459 None:intergenic 30.0%
AACAAAGATTGTGAATAGAG+TGG + chr1_2:14221476-14221495 None:intergenic 30.0%
TCACAGTTACTCATCTATTA+TGG - chr1_2:14221542-14221561 Msa0057990:three_prime_UTR 30.0%
TCATCATACATCTACATAAC+AGG - chr1_2:14221957-14221976 Msa0057990:CDS 30.0%
TGCATCAATTGAAGATGTAA+AGG - chr1_2:14222141-14222160 Msa0057990:CDS 30.0%
ATGTAAAGGATTACTACGTA+AGG - chr1_2:14222155-14222174 Msa0057990:CDS 30.0%
!!! AAAAGGTTTTAGTTTTCGCA+TGG - chr1_2:14222189-14222208 Msa0057990:CDS 30.0%
!!! AAAGGTTTTAGTTTTCGCAT+GGG - chr1_2:14222190-14222209 Msa0057990:CDS 30.0%
GTTACTAAATCAAGAACGAA+TGG - chr1_2:14222217-14222236 Msa0057990:CDS 30.0%
TCAAGAGATTCTTTGTTCAA+AGG - chr1_2:14222252-14222271 Msa0057990:CDS 30.0%
TTAAAGTACACGATCAAACA+AGG - chr1_2:14222320-14222339 Msa0057990:CDS 30.0%
TAAAGTACACGATCAAACAA+GGG - chr1_2:14222321-14222340 Msa0057990:CDS 30.0%
GGGAAAATAGTACATGATTA+TGG + chr1_2:14222417-14222436 None:intergenic 30.0%
!!! ACACTGATGCTATTTTACTA+GGG + chr1_2:14222528-14222547 None:intergenic 30.0%
!!! AACACTGATGCTATTTTACT+AGG + chr1_2:14222529-14222548 None:intergenic 30.0%
TGAAATGCATAAAAAAACCC+AGG + chr1_2:14222697-14222716 None:intergenic 30.0%
! CACCAACAATCTATACTTTT+TGG - chr1_2:14222871-14222890 Msa0057990:intron 30.0%
!!! AAACTGAAGAGAGTTTTGTT+TGG - chr1_2:14222914-14222933 Msa0057990:intron 30.0%
! TATTTCTAATGCAGTTGCAA+AGG - chr1_2:14223008-14223027 Msa0057990:intron 30.0%
TGATGACTTTGATTCTGATT+GGG - chr1_2:14223167-14223186 Msa0057990:intron 30.0%
ATTCATACTTTCACTCCTTT+GGG + chr1_2:14223313-14223332 None:intergenic 30.0%
TATTCATACTTTCACTCCTT+TGG + chr1_2:14223314-14223333 None:intergenic 30.0%
!! AAAAGTGTTCAGGATATTTC+AGG - chr1_2:14223515-14223534 Msa0057990:CDS 30.0%
TGAAAAGTCACATGATAGTT+AGG + chr1_2:14223636-14223655 None:intergenic 30.0%
CCGTAAAATTTCCTTCAATA+AGG + chr1_2:14224048-14224067 None:intergenic 30.0%
TGTAGTTATTGCAATGGAAA+AGG - chr1_2:14224849-14224868 Msa0057990:CDS 30.0%
! AGATGTCCAAGTTTAAAACA+TGG - chr1_2:14224885-14224904 Msa0057990:CDS 30.0%
!! TACCTTCCATGTTTTAAACT+TGG + chr1_2:14224894-14224913 None:intergenic 30.0%
GGTTTGTAACTGAATAAACT+TGG + chr1_2:14224977-14224996 None:intergenic 30.0%
! GTTACAAACCAATGTCTTTT+AGG - chr1_2:14224987-14225006 Msa0057990:exon 30.0%
ATATCACACCTAAAAGACAT+TGG + chr1_2:14224998-14225017 None:intergenic 30.0%
TTTAGGTGTGATATCATCAA+TGG - chr1_2:14225004-14225023 Msa0057990:intron 30.0%
! CAAACTAGAAGCTTTAACAT+TGG + chr1_2:14225044-14225063 None:intergenic 30.0%
! CAATGTTAAAGCTTCTAGTT+TGG - chr1_2:14225042-14225061 Msa0057990:intron 30.0%
!! TTCTAGTTTGGTTGATTAAG+AGG - chr1_2:14225054-14225073 Msa0057990:intron 30.0%
CTAGTGTTAATTCCTAGTAT+TGG - chr1_2:14225160-14225179 Msa0057990:intron 30.0%
!! ATTTCCATCTATTTTTCTGG+TGG - chr1_2:14225317-14225336 Msa0057990:intron 30.0%
!! TTTCCATCTATTTTTCTGGT+GGG - chr1_2:14225318-14225337 Msa0057990:intron 30.0%
! CTTTTCAGATTGTGTTTACT+AGG - chr1_2:14225393-14225412 Msa0057990:intron 30.0%
TGTGAAAATGAAGGAGAACA+GGG + chr1_2:14221362-14221381 None:intergenic 35.0%
TTGTGAAAATGAAGGAGAAC+AGG + chr1_2:14221363-14221382 None:intergenic 35.0%
! CCATAATAATAGAGGTGCAT+GGG + chr1_2:14221679-14221698 None:intergenic 35.0%
! ACCATAATAATAGAGGTGCA+TGG + chr1_2:14221680-14221699 None:intergenic 35.0%
ACAACCAGCAAACTAAAGAT+TGG + chr1_2:14221767-14221786 None:intergenic 35.0%
ACATCTACATAACAGGATTG+TGG - chr1_2:14221964-14221983 Msa0057990:intron 35.0%
CATCTACATAACAGGATTGT+GGG - chr1_2:14221965-14221984 Msa0057990:intron 35.0%
CATGAACATACAACCATGAA+TGG - chr1_2:14222022-14222041 Msa0057990:intron 35.0%
AGAGATTCTTTGTTCAAAGG+AGG - chr1_2:14222255-14222274 Msa0057990:CDS 35.0%
GAGATTCTTTGTTCAAAGGA+GGG - chr1_2:14222256-14222275 Msa0057990:CDS 35.0%
TCAAGAAAAATGAAGATGGG+TGG - chr1_2:14222368-14222387 Msa0057990:CDS 35.0%
ATTGATGTGCTTCATGATTC+TGG - chr1_2:14222496-14222515 Msa0057990:intron 35.0%
AATTGTCAGTTGAAGAATCC+TGG - chr1_2:14222676-14222695 Msa0057990:intron 35.0%
ATTGTCAGTTGAAGAATCCT+GGG - chr1_2:14222677-14222696 Msa0057990:intron 35.0%
!!! ATTGCTTTTGGGTTGATTCA+AGG - chr1_2:14222743-14222762 Msa0057990:intron 35.0%
TGATGATTAACTCCAGTGAA+TGG + chr1_2:14222853-14222872 None:intergenic 35.0%
!!! TTTTTGGTTGTGCTCTGTTA+TGG - chr1_2:14222887-14222906 Msa0057990:intron 35.0%
!! TTTTGGTTGTGCTCTGTTAT+GGG - chr1_2:14222888-14222907 Msa0057990:intron 35.0%
CAATAATGATGATTCACCTC+TGG + chr1_2:14223039-14223058 None:intergenic 35.0%
! TAGATTTGGTTCAAGTACTC+TGG + chr1_2:14223087-14223106 None:intergenic 35.0%
CGCTATGTTCATGATAGATT+TGG + chr1_2:14223101-14223120 None:intergenic 35.0%
AGTCATCAGAAGTGATAGTT+TGG + chr1_2:14223155-14223174 None:intergenic 35.0%
CTGATGACTTTGATTCTGAT+TGG - chr1_2:14223166-14223185 Msa0057990:intron 35.0%
GATGACTTTGATTCTGATTG+GGG - chr1_2:14223168-14223187 Msa0057990:intron 35.0%
ACGAGTTGCAAGATAACAAA+TGG - chr1_2:14223208-14223227 Msa0057990:CDS 35.0%
AAACTCTGACGTACATAAGA+AGG + chr1_2:14223270-14223289 None:intergenic 35.0%
! TGTATCACAAACTTGCTCAA+TGG + chr1_2:14223369-14223388 None:intergenic 35.0%
GTTTGTGATACAGTATGAGA+AGG - chr1_2:14223377-14223396 Msa0057990:CDS 35.0%
TTTATATCCCATGGAAGAAG+AGG - chr1_2:14223473-14223492 Msa0057990:CDS 35.0%
!! ATATTTCAGGATGAGTTGGT+TGG - chr1_2:14223528-14223547 Msa0057990:CDS 35.0%
!! TATTTCAGGATGAGTTGGTT+GGG - chr1_2:14223529-14223548 Msa0057990:CDS 35.0%
GGCTTAGAACATATTGAGAA+GGG + chr1_2:14223764-14223783 None:intergenic 35.0%
ACTTAGCATTTATGGTCCAT+CGG + chr1_2:14223785-14223804 None:intergenic 35.0%
ATGGACCATAAATGCTAAGT+AGG - chr1_2:14223785-14223804 Msa0057990:CDS 35.0%
TGGACCATAAATGCTAAGTA+GGG - chr1_2:14223786-14223805 Msa0057990:CDS 35.0%
AGGTATTCATGGGTATTCAT+GGG + chr1_2:14224328-14224347 None:intergenic 35.0%
CGGGTATCATATTTATCCAA+CGG - chr1_2:14224401-14224420 Msa0057990:CDS 35.0%
GGGTATCATATTTATCCAAC+GGG - chr1_2:14224402-14224421 Msa0057990:CDS 35.0%
GGTATCATATTTATCCAACG+GGG - chr1_2:14224403-14224422 Msa0057990:CDS 35.0%
TTAGCATTAGGGATGTCAAT+GGG + chr1_2:14224465-14224484 None:intergenic 35.0%
TCTCTTGAACTATCTGAAAG+AGG - chr1_2:14224579-14224598 Msa0057990:CDS 35.0%
TTTACGAATGAAAGGCAGTT+TGG - chr1_2:14224800-14224819 Msa0057990:CDS 35.0%
ACCAGTTGTAGTTATTGCAA+TGG - chr1_2:14224843-14224862 Msa0057990:CDS 35.0%
TCCATTGCAATAACTACAAC+TGG + chr1_2:14224847-14224866 None:intergenic 35.0%
! GTCCAAGTTTAAAACATGGA+AGG - chr1_2:14224889-14224908 Msa0057990:CDS 35.0%
GTAACTGAATAAACTTGGCA+TGG + chr1_2:14224972-14224991 None:intergenic 35.0%
!!! AGACCTGTTTTTGCCAATAA+GGG - chr1_2:14225191-14225210 Msa0057990:intron 35.0%
TATCCCTTATTGGCAAAAAC+AGG + chr1_2:14225197-14225216 None:intergenic 35.0%
TCGGCAAAATTATCCCTTAT+TGG + chr1_2:14225207-14225226 None:intergenic 35.0%
! GATAATTTTGCCGAAGTCAA+AGG - chr1_2:14225213-14225232 Msa0057990:intron 35.0%
GATTTCTCTGATGTGATTCT+AGG - chr1_2:14225241-14225260 Msa0057990:intron 35.0%
AATAGATGGAAATTCACACC+AGG + chr1_2:14225310-14225329 None:intergenic 35.0%
ATTCCCACCAGAAAAATAGA+TGG + chr1_2:14225324-14225343 None:intergenic 35.0%
TTCAGATTGTGTTTACTAGG+AGG - chr1_2:14225396-14225415 Msa0057990:intron 35.0%
TCAGATTGTGTTTACTAGGA+GGG - chr1_2:14225397-14225416 Msa0057990:intron 35.0%
! AGTGATGGGAATTTGATACG+TGG + chr1_2:14221515-14221534 None:intergenic 40.0%
ACTGTGAAGAACTGAGTGAT+GGG + chr1_2:14221529-14221548 None:intergenic 40.0%
AACTGTGAAGAACTGAGTGA+TGG + chr1_2:14221530-14221549 None:intergenic 40.0%
! AATAATAGAGGTGCATGGGA+TGG + chr1_2:14221675-14221694 None:intergenic 40.0%
CCCATGCACCTCTATTATTA+TGG - chr1_2:14221676-14221695 Msa0057990:three_prime_UTR 40.0%
!! ACCTCCAATCTTTAGTTTGC+TGG - chr1_2:14221760-14221779 Msa0057990:three_prime_UTR 40.0%
ACCAGCAAACTAAAGATTGG+AGG + chr1_2:14221764-14221783 None:intergenic 40.0%
!! TTTAGTTTGCTGGTTGTCGT+GGG - chr1_2:14221770-14221789 Msa0057990:three_prime_UTR 40.0%
TACATCATCTGAGCCATTCA+TGG + chr1_2:14222038-14222057 None:intergenic 40.0%
! ATTCCTTCAAAGGGCTCTAA+GGG + chr1_2:14222115-14222134 None:intergenic 40.0%
GCAAACTCCATTCCTTCAAA+GGG + chr1_2:14222124-14222143 None:intergenic 40.0%
TGCAAACTCCATTCCTTCAA+AGG + chr1_2:14222125-14222144 None:intergenic 40.0%
GTAAGGTACGCCAAGAAAAA+AGG - chr1_2:14222172-14222191 Msa0057990:CDS 40.0%
!! AGAACGAATGGTGTTGTGAT+TGG - chr1_2:14222229-14222248 Msa0057990:CDS 40.0%
AAGATGCTGTGAACTTCTTG+GGG + chr1_2:14222437-14222456 None:intergenic 40.0%
GAAGATGCTGTGAACTTCTT+GGG + chr1_2:14222438-14222457 None:intergenic 40.0%
GTGCTTCATGATTCTGGTAT+AGG - chr1_2:14222502-14222521 Msa0057990:intron 40.0%
TCAGTGTTATGTACTGAGAG+TGG - chr1_2:14222541-14222560 Msa0057990:intron 40.0%
!! AGTGGTGGTGTTGATAATGT+TGG - chr1_2:14222559-14222578 Msa0057990:intron 40.0%
! GGTTGATTCAAGGTCTAGAA+TGG - chr1_2:14222753-14222772 Msa0057990:intron 40.0%
!! TGAATGGAACAAAGGGCATT+AGG + chr1_2:14222837-14222856 None:intergenic 40.0%
ACTCCAGTGAATGGAACAAA+GGG + chr1_2:14222844-14222863 None:intergenic 40.0%
AACTCCAGTGAATGGAACAA+AGG + chr1_2:14222845-14222864 None:intergenic 40.0%
TTGTTTGGTTGCTACGTACT+TGG - chr1_2:14222929-14222948 Msa0057990:intron 40.0%
ACGTACTTGGTTAGAAGCAA+TGG - chr1_2:14222942-14222961 Msa0057990:intron 40.0%
ACTTGGTTAGAAGCAATGGA+TGG - chr1_2:14222946-14222965 Msa0057990:intron 40.0%
! AGTTGCAAAGGTTTTTCCAG+AGG - chr1_2:14223020-14223039 Msa0057990:intron 40.0%
AAGAAGATCTACACCATTCG+AGG - chr1_2:14223234-14223253 Msa0057990:CDS 40.0%
TCTACACCATTCGAGGAAAA+TGG - chr1_2:14223241-14223260 Msa0057990:CDS 40.0%
CTACACCATTCGAGGAAAAT+GGG - chr1_2:14223242-14223261 Msa0057990:CDS 40.0%
TCTTGACGCACGTTATAACA+AGG - chr1_2:14223401-14223420 Msa0057990:CDS 40.0%
GAGAGAAGAATGTCAAGACA+AGG - chr1_2:14223427-14223446 Msa0057990:CDS 40.0%
GGATATAAAGTACGCAGAAG+TGG + chr1_2:14223462-14223481 None:intergenic 40.0%
TCTGCGTACTTTATATCCCA+TGG - chr1_2:14223464-14223483 Msa0057990:CDS 40.0%
! TTTGAAGCCTCTTCTTCCAT+GGG + chr1_2:14223483-14223502 None:intergenic 40.0%
!!! TTTTGAAGCCTCTTCTTCCA+TGG + chr1_2:14223484-14223503 None:intergenic 40.0%
CAGGATATTTCAGGATGAGT+TGG - chr1_2:14223524-14223543 Msa0057990:CDS 40.0%
! TTGTCGCATGTTTGAGTTTG+TGG - chr1_2:14223683-14223702 Msa0057990:CDS 40.0%
! TGTCGCATGTTTGAGTTTGT+GGG - chr1_2:14223684-14223703 Msa0057990:CDS 40.0%
CGGCTTAGAACATATTGAGA+AGG + chr1_2:14223765-14223784 None:intergenic 40.0%
! CTCAATATGTTCTAAGCCGA+TGG - chr1_2:14223766-14223785 Msa0057990:CDS 40.0%
GGACCATAAATGCTAAGTAG+GGG - chr1_2:14223787-14223806 Msa0057990:CDS 40.0%
GTATCCACTGGTATAGTCAA+CGG - chr1_2:14223883-14223902 Msa0057990:CDS 40.0%
TATCCACTGGTATAGTCAAC+GGG - chr1_2:14223884-14223903 Msa0057990:CDS 40.0%
TTTGATTGTACCCATACCCA+CGG - chr1_2:14223945-14223964 Msa0057990:CDS 40.0%
GTTAACGAGGAATCTTAGGT+AGG + chr1_2:14224071-14224090 None:intergenic 40.0%
GGTTGTTAACGAGGAATCTT+AGG + chr1_2:14224075-14224094 None:intergenic 40.0%
! GAGGTATTCATGGGTATTCA+TGG + chr1_2:14224329-14224348 None:intergenic 40.0%
!! GTGGGTATTGAGGTATTCAT+GGG + chr1_2:14224338-14224357 None:intergenic 40.0%
CATGAATACCTCAATACCCA+CGG - chr1_2:14224337-14224356 Msa0057990:CDS 40.0%
ATGAATACCTCAATACCCAC+GGG - chr1_2:14224338-14224357 Msa0057990:CDS 40.0%
ATCATATTTATCCAACGGGG+CGG - chr1_2:14224406-14224425 Msa0057990:CDS 40.0%
TATCATACTATCCGTACCCA+TGG - chr1_2:14224436-14224455 Msa0057990:CDS 40.0%
ATCATACTATCCGTACCCAT+GGG - chr1_2:14224437-14224456 Msa0057990:CDS 40.0%
CTTAGCATTAGGGATGTCAA+TGG + chr1_2:14224466-14224485 None:intergenic 40.0%
AATTGCAATTGAAGACCTCG+AGG - chr1_2:14224503-14224522 Msa0057990:CDS 40.0%
TGCAATTCAAGCTTTACGGA+AGG - chr1_2:14224629-14224648 Msa0057990:CDS 40.0%
CAAGTTTATGGTCTGGTCAT+CGG + chr1_2:14224739-14224758 None:intergenic 40.0%
GATCACACAAGTTTATGGTC+TGG + chr1_2:14224746-14224765 None:intergenic 40.0%
TGGAGGATCACACAAGTTTA+TGG + chr1_2:14224751-14224770 None:intergenic 40.0%
CCTTTCATTCGTAAAGTGCA+TGG + chr1_2:14224795-14224814 None:intergenic 40.0%
CCATGCACTTTACGAATGAA+AGG - chr1_2:14224792-14224811 Msa0057990:CDS 40.0%
! TTGGACATCTACGTTTGTTG+TGG + chr1_2:14224875-14224894 None:intergenic 40.0%
GTCTGCAACAAACCAATACT+AGG + chr1_2:14225175-14225194 None:intergenic 40.0%
!!! CAGACCTGTTTTTGCCAATA+AGG - chr1_2:14225190-14225209 Msa0057990:intron 40.0%
! AATTTTGCCGAAGTCAAAGG+TGG - chr1_2:14225216-14225235 Msa0057990:intron 40.0%
! AAATCCACCACCTTTGACTT+CGG + chr1_2:14225226-14225245 None:intergenic 40.0%
TCTGATGTGATTCTAGGCTT+TGG - chr1_2:14225247-14225266 Msa0057990:intron 40.0%
! TTTCCCAGCTTTTGTACCTT+TGG - chr1_2:14225343-14225362 Msa0057990:intron 40.0%
CAGATTGTGTTTACTAGGAG+GGG - chr1_2:14225398-14225417 Msa0057990:intron 40.0%
CAGAGCGGTTGTGAAAATGA+AGG + chr1_2:14221371-14221390 None:intergenic 45.0%
GTCGAGAATCAAGTACAGAG+CGG + chr1_2:14221386-14221405 None:intergenic 45.0%
GCAACAGAGAGTTGCAGATT+CGG + chr1_2:14221411-14221430 None:intergenic 45.0%
!! CTTTAGTTTGCTGGTTGTCG+TGG - chr1_2:14221769-14221788 Msa0057990:three_prime_UTR 45.0%
!! TTCCTTCAAAGGGCTCTAAG+GGG + chr1_2:14222114-14222133 None:intergenic 45.0%
CATTCCTTCAAAGGGCTCTA+AGG + chr1_2:14222116-14222135 None:intergenic 45.0%
! CTTAGAGCCCTTTGAAGGAA+TGG - chr1_2:14222114-14222133 Msa0057990:CDS 45.0%
GTACACGATCAAACAAGGGT+AGG - chr1_2:14222325-14222344 Msa0057990:CDS 45.0%
CGAAGATGCTGTGAACTTCT+TGG + chr1_2:14222439-14222458 None:intergenic 45.0%
GTGTTATGTACTGAGAGTGG+TGG - chr1_2:14222544-14222563 Msa0057990:intron 45.0%
GCATTTCAAATGGACGCAGA+AGG - chr1_2:14222709-14222728 Msa0057990:intron 45.0%
ATGCCCTTTGTTCCATTCAC+TGG - chr1_2:14222838-14222857 Msa0057990:intron 45.0%
! AGGAACCCATTTTCCTCGAA+TGG + chr1_2:14223250-14223269 None:intergenic 45.0%
! GTACGTCAGAGTTTTTGTGC+TGG - chr1_2:14223276-14223295 Msa0057990:CDS 45.0%
CATACTTTCACTCCTTTGGG+TGG + chr1_2:14223310-14223329 None:intergenic 45.0%
CCACCCCTACTTAGCATTTA+TGG + chr1_2:14223793-14223812 None:intergenic 45.0%
CCATAAATGCTAAGTAGGGG+TGG - chr1_2:14223790-14223809 Msa0057990:CDS 45.0%
! ATACCCGTTGACTATACCAG+TGG + chr1_2:14223890-14223909 None:intergenic 45.0%
TTGATTGTACCCATACCCAC+GGG - chr1_2:14223946-14223965 Msa0057990:CDS 45.0%
!! CGTGGGTATTGAGGTATTCA+TGG + chr1_2:14224339-14224358 None:intergenic 45.0%
TCATATTTATCCAACGGGGC+GGG - chr1_2:14224407-14224426 Msa0057990:CDS 45.0%
AAGTGCATGGACGACCTTTA+GGG + chr1_2:14224782-14224801 None:intergenic 45.0%
AAAGTGCATGGACGACCTTT+AGG + chr1_2:14224783-14224802 None:intergenic 45.0%
!!! TCTGGCGTGATTTCAGGTTT+TGG - chr1_2:14225277-14225296 Msa0057990:intron 45.0%
! GCACCAAAGGTACAAAAGCT+GGG + chr1_2:14225349-14225368 None:intergenic 45.0%
! CAGCTTTTGTACCTTTGGTG+CGG - chr1_2:14225348-14225367 Msa0057990:intron 45.0%
TTACTAGGAGGGGATCTGTT+CGG - chr1_2:14225408-14225427 Msa0057990:intron 45.0%
ACTTTCACTCCTTTGGGTGG+TGG + chr1_2:14223307-14223326 None:intergenic 50.0%
GGCAAAAATACCCATGCCCA+CGG - chr1_2:14223811-14223830 Msa0057990:CDS 50.0%
GCAAAAATACCCATGCCCAC+GGG - chr1_2:14223812-14223831 Msa0057990:CDS 50.0%
!!! CCGTGATGGATTTTACCCAC+GGG + chr1_2:14223840-14223859 None:intergenic 50.0%
CCCGTGGGTAAAATCCATCA+CGG - chr1_2:14223837-14223856 Msa0057990:CDS 50.0%
!!! CCCGTGATGGATTTTACCCA+CGG + chr1_2:14223841-14223860 None:intergenic 50.0%
CCGTGGGTAAAATCCATCAC+GGG - chr1_2:14223838-14223857 Msa0057990:CDS 50.0%
GGTAAAATCCATCACGGGCA+CGG - chr1_2:14223843-14223862 Msa0057990:CDS 50.0%
GTAAAATCCATCACGGGCAC+GGG - chr1_2:14223844-14223863 Msa0057990:CDS 50.0%
TAAAATCCATCACGGGCACG+GGG - chr1_2:14223845-14223864 Msa0057990:CDS 50.0%
GTAGCTAAACGGGTATCCAC+TGG - chr1_2:14223871-14223890 Msa0057990:CDS 50.0%
TGGGTATTCATGGGTACCCA+TGG + chr1_2:14224319-14224338 None:intergenic 50.0%
TCAATGGGTACCCATGGGTA+CGG + chr1_2:14224450-14224469 None:intergenic 50.0%
GGATGTCAATGGGTACCCAT+GGG + chr1_2:14224455-14224474 None:intergenic 50.0%
GCAATTGAAGACCTCGAGGA+AGG - chr1_2:14224507-14224526 Msa0057990:CDS 50.0%
GTCTGGTCATCGGAGACTTT+AGG + chr1_2:14224729-14224748 None:intergenic 50.0%
TTTGCCGAAGTCAAAGGTGG+TGG - chr1_2:14225219-14225238 Msa0057990:intron 50.0%
!! CTAGGCTTTGGATGCACTTC+TGG - chr1_2:14225259-14225278 Msa0057990:intron 50.0%
TGCACTTCTGGCGTGATTTC+AGG - chr1_2:14225271-14225290 Msa0057990:intron 50.0%
!!! TCAGGTTTTGGATGCAGTCC+TGG - chr1_2:14225289-14225308 Msa0057990:intron 50.0%
! CGCACCAAAGGTACAAAAGC+TGG + chr1_2:14225350-14225369 None:intergenic 50.0%
! TCTAAGGGGAGCTCTGATGG+CGG + chr1_2:14222100-14222119 None:intergenic 55.0%
CTCCCCTTAGAGCCCTTTGA+AGG - chr1_2:14222109-14222128 Msa0057990:CDS 55.0%
CTGGAATGTCCACCACCCAA+AGG - chr1_2:14223295-14223314 Msa0057990:CDS 55.0%
! TTTTACCCACGGGTACCCGT+GGG + chr1_2:14223830-14223849 None:intergenic 55.0%
! ATTTTACCCACGGGTACCCG+TGG + chr1_2:14223831-14223850 None:intergenic 55.0%
GTATGGGTACCCGTGGGTAT+GGG + chr1_2:14223958-14223977 None:intergenic 55.0%
TATCGGGTATGGGTACCCGT+GGG + chr1_2:14223964-14223983 None:intergenic 55.0%
TTATCGGGTATGGGTACCCG+TGG + chr1_2:14223965-14223984 None:intergenic 55.0%
AGTGGGTACCCACGAGGATA+CGG - chr1_2:14224370-14224389 Msa0057990:CDS 55.0%
GGGATGTCAATGGGTACCCA+TGG + chr1_2:14224456-14224475 None:intergenic 55.0%
!! CTCTGTTTCTGCCTTCCTCG+AGG + chr1_2:14224521-14224540 None:intergenic 55.0%
CTTGTGTGATCCTCCACGTG+CGG - chr1_2:14224755-14224774 Msa0057990:CDS 55.0%
!! GGCTCTAAGGGGAGCTCTGA+TGG + chr1_2:14222103-14222122 None:intergenic 60.0%
GCACGGGGCAGGTAGCTAAA+CGG - chr1_2:14223860-14223879 Msa0057990:CDS 60.0%
CACGGGGCAGGTAGCTAAAC+GGG - chr1_2:14223861-14223880 Msa0057990:CDS 60.0%
GGTATGGGTACCCGTGGGTA+TGG + chr1_2:14223959-14223978 None:intergenic 60.0%
! GCGAGTACCCGTGGGTATTG+AGG + chr1_2:14224348-14224367 None:intergenic 60.0%
GTGGGTACCCACGAGGATAC+GGG - chr1_2:14224371-14224390 Msa0057990:CDS 60.0%
TGGGTACCCACGAGGATACG+GGG - chr1_2:14224372-14224391 Msa0057990:CDS 60.0%
TTTATCCAACGGGGCGGGCA+CGG - chr1_2:14224412-14224431 Msa0057990:CDS 60.0%
! GTACCTTTGGTGCGGCTGTG+CGG - chr1_2:14225356-14225375 Msa0057990:intron 60.0%
! TACCTTTGGTGCGGCTGTGC+GGG - chr1_2:14225357-14225376 Msa0057990:intron 60.0%
ACCCACGGGTACTCGCACAG+TGG - chr1_2:14224352-14224371 Msa0057990:CDS 65.0%
CCCACTGTGCGAGTACCCGT+GGG + chr1_2:14224356-14224375 None:intergenic 65.0%
CCCACGGGTACTCGCACAGT+GGG - chr1_2:14224353-14224372 Msa0057990:CDS 65.0%
ACCCACTGTGCGAGTACCCG+TGG + chr1_2:14224357-14224376 None:intergenic 65.0%
TCGCACAGTGGGTACCCACG+AGG - chr1_2:14224364-14224383 Msa0057990:CDS 65.0%
GTACCCACGAGGATACGGGG+CGG - chr1_2:14224375-14224394 Msa0057990:CDS 65.0%
TACCCACGAGGATACGGGGC+GGG - chr1_2:14224376-14224395 Msa0057990:CDS 65.0%
! CCTTTAGGGACCGCACGTGG+AGG + chr1_2:14224768-14224787 None:intergenic 65.0%
CCTCCACGTGCGGTCCCTAA+AGG - chr1_2:14224765-14224784 Msa0057990:CDS 65.0%
! CGACCTTTAGGGACCGCACG+TGG + chr1_2:14224771-14224790 None:intergenic 65.0%
AACCCGCACAGCCGCACCAA+AGG + chr1_2:14225362-14225381 None:intergenic 65.0%
CCACGGGTACCCGTGGGCAT+GGG + chr1_2:14223824-14223843 None:intergenic 70.0%
CCATGCCCACGGGTACCCGT+GGG - chr1_2:14223822-14223841 Msa0057990:CDS 70.0%
ATCCATCACGGGCACGGGGC+AGG - chr1_2:14223849-14223868 Msa0057990:CDS 70.0%
TACCTGCCCCGTGCCCGTGA+TGG + chr1_2:14223854-14223873 None:intergenic 70.0%
TGCCCGCCCCGTATCCTCGT+GGG + chr1_2:14224381-14224400 None:intergenic 70.0%
ACGAGGATACGGGGCGGGCA+CGG - chr1_2:14224381-14224400 Msa0057990:CDS 70.0%
GATATCCGTGCCCGCCCCGT+TGG + chr1_2:14224420-14224439 None:intergenic 70.0%
CCCATGCCCACGGGTACCCG+TGG - chr1_2:14223821-14223840 Msa0057990:CDS 75.0%
CCCACGGGTACCCGTGGGCA+TGG + chr1_2:14223825-14223844 None:intergenic 75.0%
GTGCCCGCCCCGTATCCTCG+TGG + chr1_2:14224382-14224401 None:intergenic 75.0%
CGAGGATACGGGGCGGGCAC+GGG - chr1_2:14224382-14224401 Msa0057990:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 14221347 14225640 14221347 ID=Msa0057990;Name=Msa0057990
chr1_2 mRNA 14221347 14225640 14221347 ID=Msa0057990-mRNA-1;Parent=Msa0057990;Name=Msa0057990-mRNA-1;_AED=0.03;_eAED=0.03;_QI=122|1|1|1|0.25|0|5|451|765
chr1_2 exon 14221347 14221794 14221347 ID=Msa0057990-mRNA-1:exon:5704;Parent=Msa0057990-mRNA-1
chr1_2 exon 14221912 14221978 14221912 ID=Msa0057990-mRNA-1:exon:5703;Parent=Msa0057990-mRNA-1
chr1_2 exon 14222077 14222502 14222077 ID=Msa0057990-mRNA-1:exon:5702;Parent=Msa0057990-mRNA-1
chr1_2 exon 14223185 14225008 14223185 ID=Msa0057990-mRNA-1:exon:5701;Parent=Msa0057990-mRNA-1
chr1_2 exon 14225535 14225640 14225535 ID=Msa0057990-mRNA-1:exon:5700;Parent=Msa0057990-mRNA-1
chr1_2 five_prime_UTR 14225535 14225640 14225535 ID=Msa0057990-mRNA-1:five_prime_utr;Parent=Msa0057990-mRNA-1
chr1_2 five_prime_UTR 14224993 14225008 14224993 ID=Msa0057990-mRNA-1:five_prime_utr;Parent=Msa0057990-mRNA-1
chr1_2 CDS 14223185 14224992 14223185 ID=Msa0057990-mRNA-1:cds;Parent=Msa0057990-mRNA-1
chr1_2 CDS 14222077 14222502 14222077 ID=Msa0057990-mRNA-1:cds;Parent=Msa0057990-mRNA-1
chr1_2 CDS 14221915 14221978 14221915 ID=Msa0057990-mRNA-1:cds;Parent=Msa0057990-mRNA-1
chr1_2 three_prime_UTR 14221912 14221914 14221912 ID=Msa0057990-mRNA-1:three_prime_utr;Parent=Msa0057990-mRNA-1
chr1_2 three_prime_UTR 14221347 14221794 14221347 ID=Msa0057990-mRNA-1:three_prime_utr;Parent=Msa0057990-mRNA-1
Gene Sequence

>Msa0057990

ATGACTGATCAAGAAATGACAGATATGCATGAACATACAACCATGAATGGCTCAGATGATGTACTTGCAAATGCTATTGATGCAGATTCTCTCAATGATAGACCGCCATCAGAGCTCCCCTTAGAGCCCTTTGAAGGAATGGAGTTTGCATCAATTGAAGATGTAAAGGATTACTACGTAAGGTACGCCAAGAAAAAAGGTTTTAGTTTTCGCATGGGTCGTGTTACTAAATCAAGAACGAATGGTGTTGTGATTGGTCAAGAGATTCTTTGTTCAAAGGAGGGTTTTAGATCCAAAAAAAATTTGAAAAAAGAAAATGGTAGTCTTAAAGTACACGATCAAACAAGGGTAGGATGCAAGTCAATGCTGTACATCAAGAAAAATGAAGATGGGTGGATTGTTTCTCGATTTGTAAGAGACCATAATCATGTACTATTTTCCCCAAGAAGTTCACAGCATCTTCGAGTACATAGAAAGAAAACCCCAGTGCAAAAAAAACTTATTGATGTGCTTCATGATTCTGGTATAGGCCCTAGTAAAATAGCATCAGTGTTATGTACTGAGAGTGGTGGTGTTGATAATGTTGGATTTAGCCAACAAGATGTTATTAATTATTTAAGTGTAAAGAGACAAAAACAATTAGAAAATGGAGATGCTCACTTGATGTTATCGTACTTTAAGAATTGTCAGTTGAAGAATCCTGGGTTTTTTTATGCATTTCAAATGGACGCAGAAGGTAAATTAGCAAATTGCTTTTGGGTTGATTCAAGGTCTAGAATGGCTTACAAATATTTTGGTGATGTGGTGACTTTTGATCCAACATACTTAACAAATAAATACCTAATGCCCTTTGTTCCATTCACTGGAGTTAATCATCACCAACAATCTATACTTTTTGGTTGTGCTCTGTTATGGGATGAAACTGAAGAGAGTTTTGTTTGGTTGCTACGTACTTGGTTAGAAGCAATGGATGGAGTTAGTCCTAAAACTATTATCACTGATCAAGACACTTCTATTTCTAATGCAGTTGCAAAGGTTTTTCCAGAGGTGAATCATCATTATTGTATGTGGCATATTGAGAAGAAAGTTCCAGAGTACTTGAACCAAATCTATCATGAACATAGCGAGTTTAAAAATCAATTTCACAAGTGCATTCACCAAACTATCACTTCTGATGACTTTGATTCTGATTGGGGAGCAATGATAGATAAGTACGAGTTGCAAGATAACAAATGGCTAAAGAAGATCTACACCATTCGAGGAAAATGGGTTCCTTCTTATGTACGTCAGAGTTTTTGTGCTGGAATGTCCACCACCCAAAGGAGTGAAAGTATGAATAAATTTTTTAAGGGATTTTTGAATTCAAGTACTCCATTGAGCAAGTTTGTGATACAGTATGAGAAGGCTCTTGACGCACGTTATAACAAGGAAAGAGAGAAGAATGTCAAGACAAGGAATTCAAAACCACTTCTGCGTACTTTATATCCCATGGAAGAAGAGGCTTCAAAAATTTATACAAGAAAAGTGTTCAGGATATTTCAGGATGAGTTGGTTGGGTCCCAAATATTTATTGCAGAGAAAGTTAAGTTTTTTGATGAAGTTTCCACATACAAAATTCATGAAATTTACAAAGAAAAACCTAACTATCATGTGACTTTTCAGATCATTTCAAAAGAAGCAAAATGTAGTTGTCGCATGTTTGAGTTTGTGGGAATTCTCTGTAGACATGTATTAAACGTATTCATAAAGGAAAATGTCTATTCTCTCCCTTCTCAATATGTTCTAAGCCGATGGACCATAAATGCTAAGAAAGAAAAAAGTAAAGGAATTGCAATTGAAGACCTCGAGGAAGGCAGAAACAGAGCTTCAAGTACTTCATTATTTAATAGTATTATGGTTGAGTCTCTTGAACTATCTGAAAGAGGTTCACGATCAGAAAAGCATCATGATATTGCAATTCAAGCTTTACGGAAGGCAATCACAAAACTTGATCAATTGGATCTTGAAGAACCAAATGAAGAGTTTGATAAATCGACATTTGAAGTTATGCCTAAAGTCTCCGATGACCAGACCATAAACTTGTGTGATCCTCCACGTGCGGTCCCTAAAGGTCGTCCATGCACTTTACGAATGAAAGGCAGTTTGGAATTGCACAAGAAAAATTCAACCAGTTGTAGTTATTGCAATGGAAAAGGCCACAACAAACGTAGATGTCCAAGTTTAAAACATGGAAGGTGTGATATCATCAATGGTCAACTTTCAAATTCCAATGTTAAAGCTTCTAGTTTGGTTGATTAA
Protein sequence

>Msa0057990

MTDQEMTDMHEHTTMNGSDDVLANAIDADSLNDRPPSELPLEPFEGMEFASIEDVKDYYVRYAKKKGFSFRMGRVTKSRTNGVVIGQEILCSKEGFRSKKNLKKENGSLKVHDQTRVGCKSMLYIKKNEDGWIVSRFVRDHNHVLFSPRSSQHLRVHRKKTPVQKKLIDVLHDSGIGPSKIASVLCTESGGVDNVGFSQQDVINYLSVKRQKQLENGDAHLMLSYFKNCQLKNPGFFYAFQMDAEGKLANCFWVDSRSRMAYKYFGDVVTFDPTYLTNKYLMPFVPFTGVNHHQQSILFGCALLWDETEESFVWLLRTWLEAMDGVSPKTIITDQDTSISNAVAKVFPEVNHHYCMWHIEKKVPEYLNQIYHEHSEFKNQFHKCIHQTITSDDFDSDWGAMIDKYELQDNKWLKKIYTIRGKWVPSYVRQSFCAGMSTTQRSESMNKFFKGFLNSSTPLSKFVIQYEKALDARYNKEREKNVKTRNSKPLLRTLYPMEEEASKIYTRKVFRIFQDELVGSQIFIAEKVKFFDEVSTYKIHEIYKEKPNYHVTFQIISKEAKCSCRMFEFVGILCRHVLNVFIKENVYSLPSQYVLSRWTINAKKEKSKGIAIEDLEEGRNRASSTSLFNSIMVESLELSERGSRSEKHHDIAIQALRKAITKLDQLDLEEPNEEFDKSTFEVMPKVSDDQTINLCDPPRAVPKGRPCTLRMKGSLELHKKNSTSCSYCNGKGHNKRRCPSLKHGRCDIINGQLSNSNVKASSLVD*