Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058060 | XP_003615540.1 | 52.607 | 422 | 121 | 15 | 1 | 348 | 1 | 417 | 1.00e-116 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058060 | sp|Q8GY84|RH10_ARATH | 39.720 | 428 | 167 | 15 | 1 | 343 | 8 | 429 | 7.88e-75 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058060 | G7KE07 | 52.607 | 422 | 121 | 15 | 1 | 348 | 1 | 417 | 4.77e-117 | 354 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0058060 | Msa0102320 | 0.820147 | 7.999034e-53 | -8.615850e-47 |
| Msa0058060 | Msa0147210 | 0.809767 | 1.607666e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058060 | MtrunA17_Chr5g0429221 | 52.607 | 422 | 121 | 15 | 1 | 348 | 1 | 417 | 9.19e-121 | 354 |
| Msa0058060 | MtrunA17_Chr7g0236841 | 44.203 | 414 | 154 | 12 | 1 | 340 | 8 | 418 | 4.18e-83 | 259 |
| Msa0058060 | MtrunA17_Chr6g0483491 | 44.417 | 403 | 150 | 11 | 1 | 332 | 8 | 407 | 1.17e-82 | 258 |
| Msa0058060 | MtrunA17_Chr1g0155691 | 81.333 | 150 | 23 | 1 | 180 | 324 | 1 | 150 | 3.80e-75 | 230 |
| Msa0058060 | MtrunA17_Chr1g0155201 | 47.586 | 290 | 122 | 8 | 80 | 350 | 16 | 294 | 1.04e-67 | 216 |
| Msa0058060 | MtrunA17_Chr2g0310581 | 27.924 | 419 | 225 | 12 | 3 | 350 | 53 | 465 | 1.38e-32 | 127 |
| Msa0058060 | MtrunA17_Chr1g0155211 | 58.442 | 77 | 27 | 1 | 1 | 72 | 1 | 77 | 3.51e-21 | 86.7 |
| Msa0058060 | MtrunA17_Chr3g0098121 | 25.886 | 367 | 193 | 9 | 37 | 326 | 190 | 554 | 1.26e-20 | 93.2 |
| Msa0058060 | MtrunA17_Chr2g0307471 | 24.543 | 383 | 207 | 12 | 2 | 307 | 90 | 467 | 2.25e-18 | 86.3 |
| Msa0058060 | MtrunA17_Chr2g0300291 | 26.126 | 333 | 173 | 9 | 37 | 298 | 179 | 509 | 2.34e-18 | 86.3 |
| Msa0058060 | MtrunA17_Chr7g0247191 | 26.697 | 221 | 140 | 5 | 106 | 305 | 296 | 515 | 4.67e-16 | 79.3 |
| Msa0058060 | MtrunA17_Chr7g0247181 | 25.339 | 221 | 143 | 5 | 106 | 305 | 286 | 505 | 7.00e-15 | 75.5 |
| Msa0058060 | MtrunA17_Chr7g0247221 | 25.339 | 221 | 143 | 5 | 106 | 305 | 289 | 508 | 7.57e-15 | 75.5 |
| Msa0058060 | MtrunA17_Chr7g0271121 | 24.898 | 245 | 152 | 7 | 94 | 309 | 245 | 486 | 7.79e-15 | 75.9 |
| Msa0058060 | MtrunA17_Chr4g0062301 | 23.670 | 376 | 199 | 11 | 37 | 329 | 135 | 505 | 1.10e-14 | 75.1 |
| Msa0058060 | MtrunA17_Chr1g0193491 | 25.000 | 244 | 151 | 8 | 94 | 308 | 254 | 494 | 3.55e-13 | 70.5 |
| Msa0058060 | MtrunA17_Chr4g0003441 | 24.779 | 226 | 142 | 5 | 80 | 280 | 232 | 454 | 9.93e-13 | 68.9 |
| Msa0058060 | MtrunA17_Chr3g0107851 | 24.233 | 326 | 155 | 9 | 37 | 278 | 155 | 472 | 1.30e-12 | 68.9 |
| Msa0058060 | MtrunA17_Chr1g0149251 | 23.894 | 226 | 144 | 5 | 80 | 280 | 88 | 310 | 1.06e-11 | 65.5 |
| Msa0058060 | MtrunA17_Chr2g0299681 | 31.522 | 92 | 61 | 1 | 220 | 309 | 322 | 413 | 1.32e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058060 | AT5G60990.1 | 39.720 | 428 | 167 | 15 | 1 | 343 | 8 | 429 | 8.01e-76 | 241 |
| Msa0058060 | AT1G16280.1 | 28.042 | 378 | 205 | 9 | 37 | 347 | 97 | 474 | 1.35e-31 | 124 |
| Msa0058060 | AT5G65900.1 | 24.928 | 349 | 185 | 11 | 36 | 312 | 192 | 535 | 5.47e-19 | 88.6 |
| Msa0058060 | AT4G16630.1 | 25.521 | 384 | 204 | 10 | 3 | 309 | 168 | 546 | 2.30e-18 | 87.0 |
| Msa0058060 | AT3G18600.1 | 24.355 | 349 | 180 | 11 | 37 | 310 | 128 | 467 | 2.52e-15 | 77.4 |
| Msa0058060 | AT3G61240.2 | 23.904 | 251 | 168 | 5 | 80 | 309 | 247 | 495 | 6.65e-15 | 76.3 |
| Msa0058060 | AT3G61240.1 | 23.904 | 251 | 168 | 5 | 80 | 309 | 247 | 495 | 6.65e-15 | 76.3 |
| Msa0058060 | AT4G00660.1 | 23.556 | 225 | 151 | 4 | 106 | 309 | 278 | 502 | 1.16e-14 | 75.5 |
| Msa0058060 | AT4G00660.2 | 23.556 | 225 | 151 | 4 | 106 | 309 | 278 | 502 | 1.16e-14 | 75.5 |
| Msa0058060 | AT2G45810.1 | 23.556 | 225 | 151 | 3 | 106 | 309 | 301 | 525 | 1.59e-14 | 75.1 |
| Msa0058060 | AT5G26742.1 | 25.000 | 244 | 149 | 7 | 80 | 295 | 233 | 470 | 3.49e-14 | 74.3 |
| Msa0058060 | AT1G71370.1 | 22.581 | 341 | 183 | 10 | 37 | 300 | 55 | 391 | 3.49e-14 | 73.9 |
| Msa0058060 | AT5G26742.2 | 25.000 | 244 | 149 | 7 | 80 | 295 | 233 | 470 | 3.49e-14 | 74.3 |
| Msa0058060 | AT5G26742.3 | 25.000 | 244 | 149 | 7 | 80 | 295 | 140 | 377 | 5.69e-14 | 73.6 |
| Msa0058060 | AT3G22310.2 | 22.133 | 375 | 215 | 12 | 3 | 303 | 117 | 488 | 1.30e-13 | 72.4 |
| Msa0058060 | AT3G22310.1 | 22.133 | 375 | 215 | 12 | 3 | 303 | 117 | 488 | 1.32e-13 | 72.4 |
| Msa0058060 | AT4G15850.1 | 24.232 | 293 | 150 | 13 | 80 | 304 | 180 | 468 | 1.75e-12 | 68.6 |
| Msa0058060 | AT3G22330.1 | 21.067 | 375 | 219 | 12 | 3 | 303 | 105 | 476 | 2.03e-12 | 68.6 |
| Msa0058060 | AT5G08620.1 | 24.701 | 251 | 135 | 8 | 54 | 268 | 197 | 429 | 3.62e-12 | 67.8 |
| Msa0058060 | AT5G08610.1 | 23.856 | 306 | 183 | 10 | 54 | 324 | 499 | 789 | 5.46e-12 | 67.4 |
| Msa0058060 | AT3G09620.1 | 22.866 | 328 | 190 | 9 | 37 | 313 | 435 | 750 | 6.49e-12 | 67.4 |
| Msa0058060 | AT3G09620.2 | 22.866 | 328 | 190 | 9 | 37 | 313 | 436 | 751 | 6.49e-12 | 67.4 |
| Msa0058060 | AT5G05450.1 | 25.431 | 232 | 133 | 6 | 106 | 300 | 172 | 400 | 2.12e-11 | 65.5 |
| Msa0058060 | AT5G11170.2 | 23.558 | 208 | 134 | 4 | 98 | 280 | 103 | 310 | 5.17e-11 | 63.5 |
| Msa0058060 | AT3G16840.1 | 25.871 | 201 | 134 | 5 | 146 | 331 | 465 | 665 | 8.85e-11 | 63.9 |
| Msa0058060 | AT3G16840.2 | 25.871 | 201 | 134 | 5 | 146 | 331 | 466 | 666 | 9.02e-11 | 63.9 |
Find 86 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTAAGAATCTTGGTTTC+AGG | 0.206964 | 1_2:-14337321 | Msa0058060:CDS |
| TGACTCATATAACTAATAAT+AGG | 0.255686 | 1_2:+14337293 | None:intergenic |
| AATATGATAGAGAAGCTTCT+AGG | 0.276369 | 1_2:-14336879 | Msa0058060:intron |
| TCCTTGAATGCGTTCAAGTC+TGG | 0.307276 | 1_2:-14337160 | Msa0058060:CDS |
| GCTTTGATTCTTAAGAATCT+TGG | 0.333972 | 1_2:-14337328 | Msa0058060:CDS |
| TTGAAATGTCTCCTTTCATC+TGG | 0.335756 | 1_2:+14336900 | None:intergenic |
| AATGAAATCATTTACTGATC+TGG | 0.339096 | 1_2:-14340001 | Msa0058060:CDS |
| ATGTGGTACAGCGCTTCTTC+TGG | 0.347836 | 1_2:-14337350 | Msa0058060:CDS |
| TGTGTCCGCAATAGAATATT+TGG | 0.348473 | 1_2:+14337622 | None:intergenic |
| GTGTAGGAAATGAAAGAATT+CGG | 0.357638 | 1_2:-14336331 | Msa0058060:intron |
| AACAAAAGCCACAGTCTTAC+CGG | 0.361264 | 1_2:+14339751 | None:intergenic |
| TTAGGTTGGGTCCGGTTTCG+AGG | 0.373050 | 1_2:+14339708 | None:intergenic |
| AATGAGTGGAAGAAAATATA+TGG | 0.389512 | 1_2:-14337386 | Msa0058060:CDS |
| TCGAGGAGGGTCTGCAATAT+AGG | 0.392349 | 1_2:+14339725 | None:intergenic |
| TTGTAGTGACTTTGTTAGTA+AGG | 0.398889 | 1_2:-14337119 | Msa0058060:CDS |
| TCTTGCTAGTTTAAAGTACT+TGG | 0.402176 | 1_2:-14338250 | Msa0058060:intron |
| CCCAGACTTGAACGCATTCA+AGG | 0.403087 | 1_2:+14337159 | None:intergenic |
| GGAATTTCCCCACCACGTTC+CGG | 0.403358 | 1_2:-14339770 | Msa0058060:CDS |
| ATGAAATCATTTACTGATCT+GGG | 0.404462 | 1_2:-14340000 | Msa0058060:CDS |
| TCTGGGCTTATCTTCTGAAT+TGG | 0.411456 | 1_2:-14339983 | Msa0058060:CDS |
| GACTCATATAACTAATAATA+GGG | 0.421629 | 1_2:+14337294 | None:intergenic |
| GCAGGAAACGATGATGTGTT+TGG | 0.436332 | 1_2:-14339791 | Msa0058060:intron |
| CAATAGAATATTTGGAAGAT+AGG | 0.440768 | 1_2:+14337630 | None:intergenic |
| AAAATCCTTGGGTGTGTGTT+AGG | 0.445582 | 1_2:+14338280 | None:intergenic |
| CAAGAGCAAGAGAAAATCCT+TGG | 0.448775 | 1_2:+14338268 | None:intergenic |
| AGATATTCCAGCGGTAGATA+TGG | 0.449221 | 1_2:-14337092 | Msa0058060:CDS |
| AAAAGCAAAACTTCCTCAAA+TGG | 0.452304 | 1_2:+14336739 | None:intergenic |
| GAGGAGCGGAGGATACTTAG+AGG | 0.453592 | 1_2:-14336305 | Msa0058060:CDS |
| TTGCAGACCCTCCTCGAAAC+CGG | 0.455169 | 1_2:-14339719 | Msa0058060:CDS |
| TGATTAACTACGACATTCCT+TGG | 0.462912 | 1_2:-14337069 | Msa0058060:CDS |
| CCTTGAATGCGTTCAAGTCT+GGG | 0.463606 | 1_2:-14337159 | Msa0058060:CDS |
| GTTGGGTCCGGTTTCGAGGA+GGG | 0.479153 | 1_2:+14339712 | None:intergenic |
| ATTGTATCCTGCACCATTTG+AGG | 0.486127 | 1_2:-14336752 | Msa0058060:CDS |
| GAAAGGGGTTAGGTTGGGTC+CGG | 0.486976 | 1_2:+14339700 | None:intergenic |
| CTTTATGCAAGAAAACCATA+AGG | 0.488320 | 1_2:-14337585 | Msa0058060:intron |
| AGCAAAGAAAGGGGTTAGGT+TGG | 0.494756 | 1_2:+14339694 | None:intergenic |
| GAGCACACAAAGCAAAGAAA+GGG | 0.497452 | 1_2:+14339684 | None:intergenic |
| AGGTGATATAAGATTAGGTC+AGG | 0.503170 | 1_2:+14338300 | None:intergenic |
| CCTTTGTGAGCCCAGATGAA+AGG | 0.506008 | 1_2:-14336911 | Msa0058060:CDS |
| GTGTTAGGTGATATAAGATT+AGG | 0.513506 | 1_2:+14338295 | None:intergenic |
| ACAAAGCAAAGAAAGGGGTT+AGG | 0.514279 | 1_2:+14339690 | None:intergenic |
| GCAAAGAAAGGGGTTAGGTT+GGG | 0.520003 | 1_2:+14339695 | None:intergenic |
| TGTAGTGACTTTGTTAGTAA+GGG | 0.522265 | 1_2:-14337118 | Msa0058060:CDS |
| AGAGCACACAAAGCAAAGAA+AGG | 0.525674 | 1_2:+14339683 | None:intergenic |
| AGAAATGTTCTCCGCTCACT+AGG | 0.532344 | 1_2:+14338062 | None:intergenic |
| CGGAGGATACTTAGAGGAGG+AGG | 0.538959 | 1_2:-14336299 | Msa0058060:CDS |
| GAATGTTCTCATAAGATAGC+AGG | 0.549053 | 1_2:+14338117 | None:intergenic |
| AAAACTTCCTCAAATGGTGC+AGG | 0.550172 | 1_2:+14336745 | None:intergenic |
| TGAAATGTCTCCTTTCATCT+GGG | 0.550468 | 1_2:+14336901 | None:intergenic |
| TCTTACTCTTCAAGGTTGGG+AGG | 0.551040 | 1_2:-14338323 | Msa0058060:intron |
| CAGTCTTACCGGAACGTGGT+GGG | 0.555663 | 1_2:+14339762 | None:intergenic |
| ATTATATCTACTGCGTGGGA+TGG | 0.557190 | 1_2:-14336962 | Msa0058060:CDS |
| AGGAAATGAAAGAATTCGGT+TGG | 0.559186 | 1_2:-14336327 | Msa0058060:CDS |
| AAATGAAAGAATTCGGTTGG+AGG | 0.566198 | 1_2:-14336324 | Msa0058060:CDS |
| GGTTGGGTCCGGTTTCGAGG+AGG | 0.566226 | 1_2:+14339711 | None:intergenic |
| AGTCTTACCGGAACGTGGTG+GGG | 0.570239 | 1_2:+14339763 | None:intergenic |
| CAGGATTATATCTACTGCGT+GGG | 0.574379 | 1_2:-14336966 | Msa0058060:CDS |
| AAAGAATTCGGTTGGAGGAG+CGG | 0.578400 | 1_2:-14336319 | Msa0058060:CDS |
| TTAATCACCATATCTACCGC+TGG | 0.579180 | 1_2:+14337085 | None:intergenic |
| ATCTTCCAAATATTCTATTG+CGG | 0.580285 | 1_2:-14337627 | Msa0058060:CDS |
| AAGAGCAAGAGAAAATCCTT+GGG | 0.587885 | 1_2:+14338269 | None:intergenic |
| TACCACGCAGGAGCGAAGCT+AGG | 0.588432 | 1_2:-14336276 | Msa0058060:CDS |
| TCAAATGGTGCAGGATACAA+TGG | 0.597106 | 1_2:+14336754 | None:intergenic |
| TTTCAGCGAGAGTGTATACA+AGG | 0.601075 | 1_2:+14337407 | None:intergenic |
| GGCTGAAAGATTAGCACAAG+AGG | 0.602507 | 1_2:-14336698 | Msa0058060:intron |
| CAAGAATGATTCCTAGTGAG+CGG | 0.607443 | 1_2:-14338073 | Msa0058060:CDS |
| TTTGTGTGCTCTATTCCACA+AGG | 0.612534 | 1_2:-14339672 | Msa0058060:intron |
| CATCTTACGTTTGGATACCA+AGG | 0.615406 | 1_2:+14337052 | None:intergenic |
| TACACTCTCGCTGAAATGAG+TGG | 0.616270 | 1_2:-14337400 | Msa0058060:CDS |
| TTTGGAAGGGCGTGTTAGTG+AGG | 0.618670 | 1_2:-14336719 | Msa0058060:CDS |
| TTCATCTACATTCACAGACG+AGG | 0.628178 | 1_2:-14338036 | Msa0058060:intron |
| CCTTTCATCTGGGCTCACAA+AGG | 0.638109 | 1_2:+14336911 | None:intergenic |
| CTTGAATGCGTTCAAGTCTG+GGG | 0.643789 | 1_2:-14337158 | Msa0058060:CDS |
| GAATTCGGTTGGAGGAGCGG+AGG | 0.647473 | 1_2:-14336316 | Msa0058060:CDS |
| TCTCTCTGCGCAAAATACCA+AGG | 0.650995 | 1_2:+14339937 | None:intergenic |
| ACAGGATTATATCTACTGCG+TGG | 0.654755 | 1_2:-14336967 | Msa0058060:intron |
| ACAGTCTTACCGGAACGTGG+TGG | 0.656212 | 1_2:+14339761 | None:intergenic |
| GCCACAGTCTTACCGGAACG+TGG | 0.662479 | 1_2:+14339758 | None:intergenic |
| ACCACGTTCCGGTAAGACTG+TGG | 0.666901 | 1_2:-14339759 | Msa0058060:CDS |
| AACCTAGCTTCGCTCCTGCG+TGG | 0.672883 | 1_2:+14336274 | None:intergenic |
| AGCACACAAAGCAAAGAAAG+GGG | 0.684241 | 1_2:+14339685 | None:intergenic |
| TATCACCTAACACACACCCA+AGG | 0.693371 | 1_2:-14338285 | Msa0058060:CDS |
| GAGCGGAGGATACTTAGAGG+AGG | 0.701440 | 1_2:-14336302 | Msa0058060:CDS |
| TAGAGGAGGAGGTACCACGC+AGG | 0.703854 | 1_2:-14336288 | Msa0058060:CDS |
| ATGGTATACACTCAGCAATG+TGG | 0.716399 | 1_2:-14337367 | Msa0058060:CDS |
| TAAGGGACTAGATATTCCAG+CGG | 0.751272 | 1_2:-14337101 | Msa0058060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATTAAGATAATATG+AGG | + | chr1_2:14336947-14336966 | None:intergenic | 10.0% |
| !!! | ATTTTGTAATAATGTAAAAA+CGG | + | chr1_2:14338065-14338084 | None:intergenic | 10.0% |
| !!! | TTAACATAATAACTTTTTAT+AGG | - | chr1_2:14339070-14339089 | Msa0058060:intron | 10.0% |
| !! | AAATAAGAAGAAATATGAAA+AGG | + | chr1_2:14337313-14337332 | None:intergenic | 15.0% |
| !! | GATAATATTTGTAAACATTA+AGG | + | chr1_2:14338555-14338574 | None:intergenic | 15.0% |
| !! | AGAAATTACAATTATAATAC+AGG | + | chr1_2:14339018-14339037 | None:intergenic | 15.0% |
| !! | AAGTTATTATGTTAAGAATT+AGG | + | chr1_2:14339065-14339084 | None:intergenic | 15.0% |
| !!! | TACAAGTATTTTTTTTTTTC+AGG | - | chr1_2:14339480-14339499 | Msa0058060:intron | 15.0% |
| !!! | ATATAGAAAAGTTAAGTTTT+TGG | - | chr1_2:14339647-14339666 | Msa0058060:intron | 15.0% |
| !! | CAAAAATTTGTGAAACAAAA+AGG | - | chr1_2:14336307-14336326 | Msa0058060:CDS | 20.0% |
| !! | CCTAGTTTAAGAAAAAAAAA+AGG | + | chr1_2:14336667-14336686 | None:intergenic | 20.0% |
| !!! | CCTTTTTTTTTTCTTAAACT+AGG | - | chr1_2:14336664-14336683 | Msa0058060:intron | 20.0% |
| !! | ATTGAATTATGCAATTTCTT+CGG | + | chr1_2:14336787-14336806 | None:intergenic | 20.0% |
| !! | TATAGAAAAAGCAATCAAAA+TGG | + | chr1_2:14336872-14336891 | None:intergenic | 20.0% |
| !!! | ATGAAAAAAAAGGTTTTTCA+AGG | - | chr1_2:14337029-14337048 | Msa0058060:intron | 20.0% |
| !! | CAACAATATTTCAATCAAAA+AGG | + | chr1_2:14337110-14337129 | None:intergenic | 20.0% |
| !!! | AAAAAAATGTTTTAGTACTG+TGG | + | chr1_2:14337150-14337169 | None:intergenic | 20.0% |
| !! | TTTAATGTTTCCTTTATTGA+TGG | - | chr1_2:14337222-14337241 | Msa0058060:intron | 20.0% |
| !! | ATAATATATGAGAAACAAAG+AGG | + | chr1_2:14337499-14337518 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTGTTGTTTTTTG+CGG | - | chr1_2:14337767-14337786 | Msa0058060:intron | 20.0% |
| !!! | TTTTTATTTCTTACTCTTCA+AGG | - | chr1_2:14337936-14337955 | Msa0058060:intron | 20.0% |
| !! | ATTTATAGGAATGTTTGAAA+TGG | + | chr1_2:14338344-14338363 | None:intergenic | 20.0% |
| !! | AAACATTCCTATAAATGAAA+AGG | - | chr1_2:14338348-14338367 | Msa0058060:intron | 20.0% |
| !! | AACATTCCTATAAATGAAAA+GGG | - | chr1_2:14338349-14338368 | Msa0058060:intron | 20.0% |
| !! | ATCTAGACTTGTATTAATAT+AGG | - | chr1_2:14338456-14338475 | Msa0058060:intron | 20.0% |
| !! | TCTAGACTTGTATTAATATA+GGG | - | chr1_2:14338457-14338476 | Msa0058060:intron | 20.0% |
| !!! | TTAAGAAATTCAACATTTTC+TGG | + | chr1_2:14338726-14338745 | None:intergenic | 20.0% |
| !! | GAATTTCTTAATATTAGAAG+AGG | - | chr1_2:14338735-14338754 | Msa0058060:intron | 20.0% |
| !! | GACTCATATAACTAATAATA+GGG | + | chr1_2:14338976-14338995 | None:intergenic | 20.0% |
| !! | TGACTCATATAACTAATAAT+AGG | + | chr1_2:14338977-14338996 | None:intergenic | 20.0% |
| !! | TATTATTAGTTATATGAGTC+AGG | - | chr1_2:14338976-14338995 | Msa0058060:intron | 20.0% |
| !!! | TGTTTGTATTTTATTTGTGT+AGG | - | chr1_2:14339920-14339939 | Msa0058060:intron | 20.0% |
| ! | ATGAAATCATTTACTGATCT+GGG | - | chr1_2:14336267-14336286 | Msa0058060:CDS | 25.0% |
| ! | TAAATGATTATGATACCTTG+TGG | + | chr1_2:14336613-14336632 | None:intergenic | 25.0% |
| !! | TATGAAAAGGAACTTTTATG+TGG | + | chr1_2:14337300-14337319 | None:intergenic | 25.0% |
| !! | AAGGAAAATGAACTTTTATG+TGG | + | chr1_2:14337342-14337361 | None:intergenic | 25.0% |
| !!! | AACATTTTTGAAAAGTCAGA+GGG | + | chr1_2:14337596-14337615 | None:intergenic | 25.0% |
| !!! | AAACATTTTTGAAAAGTCAG+AGG | + | chr1_2:14337597-14337616 | None:intergenic | 25.0% |
| ! | CATAACCTGGTAATATTATT+TGG | - | chr1_2:14337701-14337720 | Msa0058060:intron | 25.0% |
| ! | TCTTACCAAATAATATTACC+AGG | + | chr1_2:14337709-14337728 | None:intergenic | 25.0% |
| !! | ATAAACTTCTAGAAACTTCT+TGG | - | chr1_2:14338270-14338289 | Msa0058060:CDS | 25.0% |
| !! | TAAACTTCTAGAAACTTCTT+GGG | - | chr1_2:14338271-14338290 | Msa0058060:CDS | 25.0% |
| ! | CAATAGAATATTTGGAAGAT+AGG | + | chr1_2:14338640-14338659 | None:intergenic | 25.0% |
| ! | ATCTTCCAAATATTCTATTG+CGG | - | chr1_2:14338640-14338659 | Msa0058060:intron | 25.0% |
| !!! | TAGAAGTTTTGTTTGATGTT+TGG | - | chr1_2:14338764-14338783 | Msa0058060:intron | 25.0% |
| ! | AATGAGTGGAAGAAAATATA+TGG | - | chr1_2:14338881-14338900 | Msa0058060:intron | 25.0% |
| !! | TTTTTATAGGCAAAGAAACT+TGG | - | chr1_2:14339083-14339102 | Msa0058060:intron | 25.0% |
| !!! | TCTTTAAAATGGCAAAGTAA+AGG | + | chr1_2:14339434-14339453 | None:intergenic | 25.0% |
| !! | ATTATATACTATGACGCTTT+TGG | + | chr1_2:14339457-14339476 | None:intergenic | 25.0% |
| !! | AAAGCGTCATAGTATATAAT+TGG | - | chr1_2:14339457-14339476 | Msa0058060:intron | 25.0% |
| !! | ATTGAGCATAGTTATGTTTT+AGG | - | chr1_2:14339603-14339622 | Msa0058060:intron | 25.0% |
| !! | CTTAACTTTTCTATATAGAC+AGG | + | chr1_2:14339643-14339662 | None:intergenic | 25.0% |
| !!! | AGTTAAGTTTTTGGATTTTG+TGG | - | chr1_2:14339656-14339675 | Msa0058060:intron | 25.0% |
| !! | TCTTATTATAAAAGCTTGCT+AGG | + | chr1_2:14339775-14339794 | None:intergenic | 25.0% |
| !! | TATGATGAGTGATTTGAAAT+TGG | - | chr1_2:14339848-14339867 | Msa0058060:intron | 25.0% |
| AATATTCAGATCAGCCAAAA+AGG | + | chr1_2:14337005-14337024 | None:intergenic | 30.0% | |
| ! | GTACTGTGGTATATCAATTT+TGG | + | chr1_2:14337136-14337155 | None:intergenic | 30.0% |
| ACAAATACTGCCATCAATAA+AGG | + | chr1_2:14337235-14337254 | None:intergenic | 30.0% | |
| AGAAATTCAAGAACATAACC+TGG | - | chr1_2:14337688-14337707 | Msa0058060:intron | 30.0% | |
| TATTTCTTACTCTTCAAGGT+TGG | - | chr1_2:14337940-14337959 | Msa0058060:intron | 30.0% | |
| ATTTCTTACTCTTCAAGGTT+GGG | - | chr1_2:14337941-14337960 | Msa0058060:intron | 30.0% | |
| GTGTTAGGTGATATAAGATT+AGG | + | chr1_2:14337975-14337994 | None:intergenic | 30.0% | |
| ! | TCTTGCTAGTTTAAAGTACT+TGG | - | chr1_2:14338017-14338036 | Msa0058060:intron | 30.0% |
| TGAAATGGAAAACTCAAAAG+TGG | + | chr1_2:14338329-14338348 | None:intergenic | 30.0% | |
| CTTTATGCAAGAAAACCATA+AGG | - | chr1_2:14338682-14338701 | Msa0058060:intron | 30.0% | |
| ! | TTCAACATTTTCTGGACAAA+GGG | + | chr1_2:14338718-14338737 | None:intergenic | 30.0% |
| ! | ATTCAACATTTTCTGGACAA+AGG | + | chr1_2:14338719-14338738 | None:intergenic | 30.0% |
| GCTTTGATTCTTAAGAATCT+TGG | - | chr1_2:14338939-14338958 | Msa0058060:intron | 30.0% | |
| TTCTTAAGAATCTTGGTTTC+AGG | - | chr1_2:14338946-14338965 | Msa0058060:intron | 30.0% | |
| GAATTAGGCATATTTCTTGT+TGG | + | chr1_2:14339050-14339069 | None:intergenic | 30.0% | |
| TTGTAGTGACTTTGTTAGTA+AGG | - | chr1_2:14339148-14339167 | Msa0058060:intron | 30.0% | |
| TGTAGTGACTTTGTTAGTAA+GGG | - | chr1_2:14339149-14339168 | Msa0058060:intron | 30.0% | |
| TATATAGCACATCTTACGTT+TGG | + | chr1_2:14339227-14339246 | None:intergenic | 30.0% | |
| AATATGATAGAGAAGCTTCT+AGG | - | chr1_2:14339388-14339407 | Msa0058060:intron | 30.0% | |
| AAAAGCAAAACTTCCTCAAA+TGG | + | chr1_2:14339531-14339550 | None:intergenic | 30.0% | |
| ! | ATTTGAGGAAGTTTTGCTTT+TGG | - | chr1_2:14339530-14339549 | Msa0058060:intron | 30.0% |
| GCTATCAATGAAGACAAATT+GGG | + | chr1_2:14339699-14339718 | None:intergenic | 30.0% | |
| TGCTATCAATGAAGACAAAT+TGG | + | chr1_2:14339700-14339719 | None:intergenic | 30.0% | |
| ! | TTTGTCTTCATTGATAGCAA+AGG | - | chr1_2:14339701-14339720 | Msa0058060:CDS | 30.0% |
| GTGTAGGAAATGAAAGAATT+CGG | - | chr1_2:14339936-14339955 | Msa0058060:CDS | 30.0% | |
| TTTGTGAAACAAAAAGGCCT+TGG | - | chr1_2:14336313-14336332 | Msa0058060:CDS | 35.0% | |
| ATAGATACCTTGTAGTGCAT+GGG | + | chr1_2:14336377-14336396 | None:intergenic | 35.0% | |
| !! | GCTTTTTCTATAGATTGCTG+AGG | - | chr1_2:14336880-14336899 | Msa0058060:CDS | 35.0% |
| AGTTGTAAAGTGTAGTCAAG+AGG | + | chr1_2:14337069-14337088 | None:intergenic | 35.0% | |
| AAAAAGGAAGTGACTTAGTG+GGG | + | chr1_2:14337094-14337113 | None:intergenic | 35.0% | |
| CAAAAAGGAAGTGACTTAGT+GGG | + | chr1_2:14337095-14337114 | None:intergenic | 35.0% | |
| TCAAAAAGGAAGTGACTTAG+TGG | + | chr1_2:14337096-14337115 | None:intergenic | 35.0% | |
| TATGAGAAAAGTAACCGCTA+GGG | + | chr1_2:14337186-14337205 | None:intergenic | 35.0% | |
| TTATGAGAAAAGTAACCGCT+AGG | + | chr1_2:14337187-14337206 | None:intergenic | 35.0% | |
| GAGGCTGACAAAATTATCAT+CGG | + | chr1_2:14337480-14337499 | None:intergenic | 35.0% | |
| AGGTGATATAAGATTAGGTC+AGG | + | chr1_2:14337970-14337989 | None:intergenic | 35.0% | |
| AAGAGCAAGAGAAAATCCTT+GGG | + | chr1_2:14338001-14338020 | None:intergenic | 35.0% | |
| GAATGTTCTCATAAGATAGC+AGG | + | chr1_2:14338153-14338172 | None:intergenic | 35.0% | |
| CCTATAAATGAAAAGGGACT+CGG | - | chr1_2:14338355-14338374 | Msa0058060:intron | 35.0% | |
| AACACATGCTTAGCATTGTA+TGG | + | chr1_2:14338509-14338528 | None:intergenic | 35.0% | |
| CAATGCTAAGCATGTGTTTA+AGG | - | chr1_2:14338511-14338530 | Msa0058060:intron | 35.0% | |
| ACATTAAGGTTGTACCTTCA+CGG | + | chr1_2:14338541-14338560 | None:intergenic | 35.0% | |
| ACATGAGTCTAGCAATAGAT+TGG | + | chr1_2:14338580-14338599 | None:intergenic | 35.0% | |
| TGTGTCCGCAATAGAATATT+TGG | + | chr1_2:14338648-14338667 | None:intergenic | 35.0% | |
| TGATTAACTACGACATTCCT+TGG | - | chr1_2:14339198-14339217 | Msa0058060:intron | 35.0% | |
| ATATAATCCTGTTGATCACG+CGG | + | chr1_2:14339292-14339311 | None:intergenic | 35.0% | |
| TGAAATGTCTCCTTTCATCT+GGG | + | chr1_2:14339369-14339388 | None:intergenic | 35.0% | |
| TTGAAATGTCTCCTTTCATC+TGG | + | chr1_2:14339370-14339389 | None:intergenic | 35.0% | |
| !! | GACGCTTTTGGTCTTTAAAA+TGG | + | chr1_2:14339445-14339464 | None:intergenic | 35.0% |
| !! | AGGAAGTTTTGCTTTTGGAA+GGG | - | chr1_2:14339535-14339554 | Msa0058060:intron | 35.0% |
| ! | TTTGTGGCAAGTTGAAATTG+TGG | - | chr1_2:14339672-14339691 | Msa0058060:intron | 35.0% |
| ! | TCTTCATTGATAGCAAAGGA+GGG | - | chr1_2:14339705-14339724 | Msa0058060:CDS | 35.0% |
| AGGAAATGAAAGAATTCGGT+TGG | - | chr1_2:14339940-14339959 | Msa0058060:CDS | 35.0% | |
| AAATGAAAGAATTCGGTTGG+AGG | - | chr1_2:14339943-14339962 | Msa0058060:CDS | 35.0% | |
| TCTGGGCTTATCTTCTGAAT+TGG | - | chr1_2:14336284-14336303 | Msa0058060:CDS | 40.0% | |
| TAGATACCTTGTAGTGCATG+GGG | + | chr1_2:14336376-14336395 | None:intergenic | 40.0% | |
| GATAGATACCTTGTAGTGCA+TGG | + | chr1_2:14336378-14336397 | None:intergenic | 40.0% | |
| ATTCATCTCATTCTGCATGC+AGG | - | chr1_2:14336458-14336477 | Msa0058060:intron | 40.0% | |
| AACAAAAGCCACAGTCTTAC+CGG | + | chr1_2:14336519-14336538 | None:intergenic | 40.0% | |
| ACAAAGCAAAGAAAGGGGTT+AGG | + | chr1_2:14336580-14336599 | None:intergenic | 40.0% | |
| AGCACACAAAGCAAAGAAAG+GGG | + | chr1_2:14336585-14336604 | None:intergenic | 40.0% | |
| GAGCACACAAAGCAAAGAAA+GGG | + | chr1_2:14336586-14336605 | None:intergenic | 40.0% | |
| AGAGCACACAAAGCAAAGAA+AGG | + | chr1_2:14336587-14336606 | None:intergenic | 40.0% | |
| TTTGTGTGCTCTATTCCACA+AGG | - | chr1_2:14336595-14336614 | Msa0058060:intron | 40.0% | |
| GTAACCAACCAGCACATATA+TGG | + | chr1_2:14336840-14336859 | None:intergenic | 40.0% | |
| TTCAGATCAGCCAAAAAGGA+CGG | + | chr1_2:14337001-14337020 | None:intergenic | 40.0% | |
| !!! | GTTTTTCAAGGATTCGAACC+TGG | - | chr1_2:14337041-14337060 | Msa0058060:intron | 40.0% |
| TATAGTATTAACGGCCCTTG+CGG | - | chr1_2:14337370-14337389 | Msa0058060:CDS | 40.0% | |
| !!! | GTTTTTTGCGGTCGTTTCAT+AGG | - | chr1_2:14337779-14337798 | Msa0058060:intron | 40.0% |
| AAAATCCTTGGGTGTGTGTT+AGG | + | chr1_2:14337990-14338009 | None:intergenic | 40.0% | |
| CAAGAGCAAGAGAAAATCCT+TGG | + | chr1_2:14338002-14338021 | None:intergenic | 40.0% | |
| CAAGAATGATTCCTAGTGAG+CGG | - | chr1_2:14338194-14338213 | Msa0058060:intron | 40.0% | |
| TTCATCTACATTCACAGACG+AGG | - | chr1_2:14338231-14338250 | Msa0058060:intron | 40.0% | |
| ! | CCGAGTCCCTTTTCATTTAT+AGG | + | chr1_2:14338358-14338377 | None:intergenic | 40.0% |
| ! | TGATCTCGGATTTTACTGCA+GGG | + | chr1_2:14338384-14338403 | None:intergenic | 40.0% |
| CAGTAAAATCCGAGATCAGA+CGG | - | chr1_2:14338386-14338405 | Msa0058060:intron | 40.0% | |
| TATGTAGAACCGTCTGATCT+CGG | + | chr1_2:14338398-14338417 | None:intergenic | 40.0% | |
| TGGACTTGAAATCACAAGAG+TGG | + | chr1_2:14338489-14338508 | None:intergenic | 40.0% | |
| CATTAAGGTTGTACCTTCAC+GGG | + | chr1_2:14338540-14338559 | None:intergenic | 40.0% | |
| AAGGGAGAAGAGAAACCTTA+TGG | + | chr1_2:14338700-14338719 | None:intergenic | 40.0% | |
| CAATTCCATGCTTCTTGCAT+AGG | - | chr1_2:14338830-14338849 | Msa0058060:intron | 40.0% | |
| ACAATCCTATGCAAGAAGCA+TGG | + | chr1_2:14338838-14338857 | None:intergenic | 40.0% | |
| ! | TTTCAGCGAGAGTGTATACA+AGG | + | chr1_2:14338863-14338882 | None:intergenic | 40.0% |
| ATGGTATACACTCAGCAATG+TGG | - | chr1_2:14338900-14338919 | Msa0058060:intron | 40.0% | |
| TAAGGGACTAGATATTCCAG+CGG | - | chr1_2:14339166-14339185 | Msa0058060:intron | 40.0% | |
| AGATATTCCAGCGGTAGATA+TGG | - | chr1_2:14339175-14339194 | Msa0058060:intron | 40.0% | |
| TTAATCACCATATCTACCGC+TGG | + | chr1_2:14339185-14339204 | None:intergenic | 40.0% | |
| CATCTTACGTTTGGATACCA+AGG | + | chr1_2:14339218-14339237 | None:intergenic | 40.0% | |
| ACAGGATTATATCTACTGCG+TGG | - | chr1_2:14339300-14339319 | Msa0058060:intron | 40.0% | |
| CAGGATTATATCTACTGCGT+GGG | - | chr1_2:14339301-14339320 | Msa0058060:intron | 40.0% | |
| ATTATATCTACTGCGTGGGA+TGG | - | chr1_2:14339305-14339324 | Msa0058060:intron | 40.0% | |
| GATAGAGAAGCTTCTAGGTT+AGG | - | chr1_2:14339393-14339412 | Msa0058060:intron | 40.0% | |
| TCAAATGGTGCAGGATACAA+TGG | + | chr1_2:14339516-14339535 | None:intergenic | 40.0% | |
| ATTGTATCCTGCACCATTTG+AGG | - | chr1_2:14339515-14339534 | Msa0058060:intron | 40.0% | |
| AAAACTTCCTCAAATGGTGC+AGG | + | chr1_2:14339525-14339544 | None:intergenic | 40.0% | |
| !! | GAGGAAGTTTTGCTTTTGGA+AGG | - | chr1_2:14339534-14339553 | Msa0058060:intron | 40.0% |
| ! | GTCTTCATTGATAGCAAAGG+AGG | - | chr1_2:14339704-14339723 | Msa0058060:CDS | 40.0% |
| TCTCTCTGCGCAAAATACCA+AGG | + | chr1_2:14336333-14336352 | None:intergenic | 45.0% | |
| GCAGGAAACGATGATGTGTT+TGG | - | chr1_2:14336476-14336495 | Msa0058060:intron | 45.0% | |
| GCAAAGAAAGGGGTTAGGTT+GGG | + | chr1_2:14336575-14336594 | None:intergenic | 45.0% | |
| AGCAAAGAAAGGGGTTAGGT+TGG | + | chr1_2:14336576-14336595 | None:intergenic | 45.0% | |
| !! | GAGGCTCTAGGTTCTCAATT+TGG | - | chr1_2:14336717-14336736 | Msa0058060:CDS | 45.0% |
| ! | GCTCTAGGTTCTCAATTTGG+TGG | - | chr1_2:14336720-14336739 | Msa0058060:CDS | 45.0% |
| GCAAGAGACCATATATGTGC+TGG | - | chr1_2:14336829-14336848 | Msa0058060:intron | 45.0% | |
| ! | GAGACCATATATGTGCTGGT+TGG | - | chr1_2:14336833-14336852 | Msa0058060:intron | 45.0% |
| ! | GGATGGATTCATGTTCCTTG+CGG | + | chr1_2:14336910-14336929 | None:intergenic | 45.0% |
| ! | TATGAGGTTGCTCTGAGTTC+AGG | + | chr1_2:14336931-14336950 | None:intergenic | 45.0% |
| AAAAGGACGGGATTAGGGTT+AGG | + | chr1_2:14336988-14337007 | None:intergenic | 45.0% | |
| ! | AACCCTAATCCCGTCCTTTT+TGG | - | chr1_2:14336988-14337007 | Msa0058060:intron | 45.0% |
| AGCCAAAAAGGACGGGATTA+GGG | + | chr1_2:14336993-14337012 | None:intergenic | 45.0% | |
| TCAGATCAGCCAAAAAGGAC+GGG | + | chr1_2:14337000-14337019 | None:intergenic | 45.0% | |
| !! | AAGTGTAGTCAAGAGGTACC+AGG | + | chr1_2:14337062-14337081 | None:intergenic | 45.0% |
| GAAACTGATCCTAACCGCAA+GGG | + | chr1_2:14337387-14337406 | None:intergenic | 45.0% | |
| AGAAACTGATCCTAACCGCA+AGG | + | chr1_2:14337388-14337407 | None:intergenic | 45.0% | |
| TGCGGTTAGGATCAGTTTCT+TGG | - | chr1_2:14337388-14337407 | Msa0058060:CDS | 45.0% | |
| TCTTACTCTTCAAGGTTGGG+AGG | - | chr1_2:14337944-14337963 | Msa0058060:intron | 45.0% | |
| TATCACCTAACACACACCCA+AGG | - | chr1_2:14337982-14338001 | Msa0058060:intron | 45.0% | |
| AGAAATGTTCTCCGCTCACT+AGG | + | chr1_2:14338208-14338227 | None:intergenic | 45.0% | |
| ! | CTGATCTCGGATTTTACTGC+AGG | + | chr1_2:14338385-14338404 | None:intergenic | 45.0% |
| GTGTTTAAGGAATCCCGTGA+AGG | - | chr1_2:14338524-14338543 | Msa0058060:intron | 45.0% | |
| TACACTCTCGCTGAAATGAG+TGG | - | chr1_2:14338867-14338886 | Msa0058060:intron | 45.0% | |
| TCCTTGAATGCGTTCAAGTC+TGG | - | chr1_2:14339107-14339126 | Msa0058060:intron | 45.0% | |
| CCTTGAATGCGTTCAAGTCT+GGG | - | chr1_2:14339108-14339127 | Msa0058060:intron | 45.0% | |
| CTTGAATGCGTTCAAGTCTG+GGG | - | chr1_2:14339109-14339128 | Msa0058060:intron | 45.0% | |
| GGCTGAAAGATTAGCACAAG+AGG | - | chr1_2:14339569-14339588 | Msa0058060:intron | 45.0% | |
| TAGCAAAGGAGGGAAAAGCT+TGG | - | chr1_2:14339715-14339734 | Msa0058060:CDS | 45.0% | |
| AGCAAAGGAGGGAAAAGCTT+GGG | - | chr1_2:14339716-14339735 | Msa0058060:CDS | 45.0% | |
| CTTGGGGTGAATGGTGATTA+GGG | - | chr1_2:14339733-14339752 | Msa0058060:CDS | 45.0% | |
| AAAGAATTCGGTTGGAGGAG+CGG | - | chr1_2:14339948-14339967 | Msa0058060:CDS | 45.0% | |
| !!! | AATATTTTTTATGAAAAAAA+AGG | - | chr1_2:14337019-14337038 | Msa0058060:intron | 5.0% |
| !! | TTAATACTATAAAAATAAAA+AGG | + | chr1_2:14337361-14337380 | None:intergenic | 5.0% |
| !!! | TTTTATTTTTATAGTATTAA+CGG | - | chr1_2:14337361-14337380 | Msa0058060:CDS | 5.0% |
| GTGATTCCCCATGCACTACA+AGG | - | chr1_2:14336367-14336386 | Msa0058060:intron | 50.0% | |
| TCGAGGAGGGTCTGCAATAT+AGG | + | chr1_2:14336545-14336564 | None:intergenic | 50.0% | |
| AAAGTGGTCAGCGGTCTGAA+AGG | + | chr1_2:14336697-14336716 | None:intergenic | 50.0% | |
| TAGAGCCTCAAAGTGGTCAG+CGG | + | chr1_2:14336706-14336725 | None:intergenic | 50.0% | |
| GAGAACCTAGAGCCTCAAAG+TGG | + | chr1_2:14336713-14336732 | None:intergenic | 50.0% | |
| ! | AGGTTGCTCTGAGTTCAGGA+TGG | + | chr1_2:14336927-14336946 | None:intergenic | 50.0% |
| CAGCCAAAAAGGACGGGATT+AGG | + | chr1_2:14336994-14337013 | None:intergenic | 50.0% | |
| TAAAGACGCAAACGCCCTAG+CGG | - | chr1_2:14337169-14337188 | Msa0058060:CDS | 50.0% | |
| TATTAACGGCCCTTGCGGTT+AGG | - | chr1_2:14337375-14337394 | Msa0058060:CDS | 50.0% | |
| ATCAAAACCCGTGCATCGCA+CGG | - | chr1_2:14337836-14337855 | Msa0058060:intron | 50.0% | |
| ! | GACTGCTCTGCATTTTGAGC+AGG | - | chr1_2:14338107-14338126 | Msa0058060:CDS | 50.0% |
| ATGTGGTACAGCGCTTCTTC+TGG | - | chr1_2:14338917-14338936 | Msa0058060:intron | 50.0% | |
| GAGTCAGGTAACTGTACGAC+AGG | - | chr1_2:14338991-14339010 | Msa0058060:intron | 50.0% | |
| CCCAGACTTGAACGCATTCA+AGG | + | chr1_2:14339111-14339130 | None:intergenic | 50.0% | |
| CCTTTCATCTGGGCTCACAA+AGG | + | chr1_2:14339359-14339378 | None:intergenic | 50.0% | |
| CCTTTGTGAGCCCAGATGAA+AGG | - | chr1_2:14339356-14339375 | Msa0058060:intron | 50.0% | |
| ! | TTTGGAAGGGCGTGTTAGTG+AGG | - | chr1_2:14339548-14339567 | Msa0058060:intron | 50.0% |
| GCAAAGGAGGGAAAAGCTTG+GGG | - | chr1_2:14339717-14339736 | Msa0058060:CDS | 50.0% | |
| AGGGAAAAGCTTGGGGTGAA+TGG | - | chr1_2:14339724-14339743 | Msa0058060:CDS | 50.0% | |
| GCTTGGGGTGAATGGTGATT+AGG | - | chr1_2:14339732-14339751 | Msa0058060:CDS | 50.0% | |
| GGAATTTCCCCACCACGTTC+CGG | - | chr1_2:14336497-14336516 | Msa0058060:intron | 55.0% | |
| AGTCTTACCGGAACGTGGTG+GGG | + | chr1_2:14336507-14336526 | None:intergenic | 55.0% | |
| CAGTCTTACCGGAACGTGGT+GGG | + | chr1_2:14336508-14336527 | None:intergenic | 55.0% | |
| ACAGTCTTACCGGAACGTGG+TGG | + | chr1_2:14336509-14336528 | None:intergenic | 55.0% | |
| ACCACGTTCCGGTAAGACTG+TGG | - | chr1_2:14336508-14336527 | Msa0058060:intron | 55.0% | |
| TTGCAGACCCTCCTCGAAAC+CGG | - | chr1_2:14336548-14336567 | Msa0058060:intron | 55.0% | |
| !! | TTAGGTTGGGTCCGGTTTCG+AGG | + | chr1_2:14336562-14336581 | None:intergenic | 55.0% |
| !! | GAAAGGGGTTAGGTTGGGTC+CGG | + | chr1_2:14336570-14336589 | None:intergenic | 55.0% |
| TCAGACCGCTGACCACTTTG+AGG | - | chr1_2:14336698-14336717 | Msa0058060:intron | 55.0% | |
| !! | GCTGACCACTTTGAGGCTCT+AGG | - | chr1_2:14336705-14336724 | Msa0058060:CDS | 55.0% |
| GATTGCTGAGGAGAACCGCA+AGG | - | chr1_2:14336892-14336911 | Msa0058060:CDS | 55.0% | |
| TCAAAACCCGTGCATCGCAC+GGG | - | chr1_2:14337837-14337856 | Msa0058060:intron | 55.0% | |
| ACTCTAACCCGTGCGATGCA+CGG | + | chr1_2:14337847-14337866 | None:intergenic | 55.0% | |
| CTCATGACCGCGTGATCAAC+AGG | - | chr1_2:14339282-14339301 | Msa0058060:intron | 55.0% | |
| GAGGAGCGGAGGATACTTAG+AGG | - | chr1_2:14339962-14339981 | Msa0058060:CDS | 55.0% | |
| GAGCGGAGGATACTTAGAGG+AGG | - | chr1_2:14339965-14339984 | Msa0058060:CDS | 55.0% | |
| CGGAGGATACTTAGAGGAGG+AGG | - | chr1_2:14339968-14339987 | Msa0058060:CDS | 55.0% | |
| GCCACAGTCTTACCGGAACG+TGG | + | chr1_2:14336512-14336531 | None:intergenic | 60.0% | |
| GTTGGGTCCGGTTTCGAGGA+GGG | + | chr1_2:14336558-14336577 | None:intergenic | 60.0% | |
| CTCTAACCCGTGCGATGCAC+GGG | + | chr1_2:14337846-14337865 | None:intergenic | 60.0% | |
| GAATTCGGTTGGAGGAGCGG+AGG | - | chr1_2:14339951-14339970 | Msa0058060:CDS | 60.0% | |
| !! | TAGAGGAGGAGGTACCACGC+AGG | - | chr1_2:14339979-14339998 | Msa0058060:CDS | 60.0% |
| TACCACGCAGGAGCGAAGCT+AGG | - | chr1_2:14339991-14340010 | Msa0058060:CDS | 60.0% | |
| AACCTAGCTTCGCTCCTGCG+TGG | + | chr1_2:14339996-14340015 | None:intergenic | 60.0% | |
| GGTTGGGTCCGGTTTCGAGG+AGG | + | chr1_2:14336559-14336578 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 14336267 | 14340022 | 14336267 | ID=Msa0058060;Name=Msa0058060 |
| chr1_2 | mRNA | 14336267 | 14340022 | 14336267 | ID=Msa0058060-mRNA-1;Parent=Msa0058060;Name=Msa0058060-mRNA-1;_AED=0.21;_eAED=0.23;_QI=0|0.33|0.3|1|0.66|0.7|10|0|350 |
| chr1_2 | exon | 14339923 | 14340022 | 14339923 | ID=Msa0058060-mRNA-1:exon:5756;Parent=Msa0058060-mRNA-1 |
| chr1_2 | exon | 14339673 | 14339809 | 14339673 | ID=Msa0058060-mRNA-1:exon:5755;Parent=Msa0058060-mRNA-1 |
| chr1_2 | exon | 14338251 | 14338331 | 14338251 | ID=Msa0058060-mRNA-1:exon:5754;Parent=Msa0058060-mRNA-1 |
| chr1_2 | exon | 14338037 | 14338153 | 14338037 | ID=Msa0058060-mRNA-1:exon:5753;Parent=Msa0058060-mRNA-1 |
| chr1_2 | exon | 14337586 | 14337657 | 14337586 | ID=Msa0058060-mRNA-1:exon:5752;Parent=Msa0058060-mRNA-1 |
| chr1_2 | exon | 14337306 | 14337437 | 14337306 | ID=Msa0058060-mRNA-1:exon:5751;Parent=Msa0058060-mRNA-1 |
| chr1_2 | exon | 14337060 | 14337197 | 14337060 | ID=Msa0058060-mRNA-1:exon:5750;Parent=Msa0058060-mRNA-1 |
| chr1_2 | exon | 14336880 | 14336985 | 14336880 | ID=Msa0058060-mRNA-1:exon:5749;Parent=Msa0058060-mRNA-1 |
| chr1_2 | exon | 14336699 | 14336787 | 14336699 | ID=Msa0058060-mRNA-1:exon:5748;Parent=Msa0058060-mRNA-1 |
| chr1_2 | exon | 14336267 | 14336347 | 14336267 | ID=Msa0058060-mRNA-1:exon:5747;Parent=Msa0058060-mRNA-1 |
| chr1_2 | CDS | 14339923 | 14340022 | 14339923 | ID=Msa0058060-mRNA-1:cds;Parent=Msa0058060-mRNA-1 |
| chr1_2 | CDS | 14339673 | 14339809 | 14339673 | ID=Msa0058060-mRNA-1:cds;Parent=Msa0058060-mRNA-1 |
| chr1_2 | CDS | 14338251 | 14338331 | 14338251 | ID=Msa0058060-mRNA-1:cds;Parent=Msa0058060-mRNA-1 |
| chr1_2 | CDS | 14338037 | 14338153 | 14338037 | ID=Msa0058060-mRNA-1:cds;Parent=Msa0058060-mRNA-1 |
| chr1_2 | CDS | 14337586 | 14337657 | 14337586 | ID=Msa0058060-mRNA-1:cds;Parent=Msa0058060-mRNA-1 |
| chr1_2 | CDS | 14337306 | 14337437 | 14337306 | ID=Msa0058060-mRNA-1:cds;Parent=Msa0058060-mRNA-1 |
| chr1_2 | CDS | 14337060 | 14337197 | 14337060 | ID=Msa0058060-mRNA-1:cds;Parent=Msa0058060-mRNA-1 |
| chr1_2 | CDS | 14336880 | 14336985 | 14336880 | ID=Msa0058060-mRNA-1:cds;Parent=Msa0058060-mRNA-1 |
| chr1_2 | CDS | 14336699 | 14336787 | 14336699 | ID=Msa0058060-mRNA-1:cds;Parent=Msa0058060-mRNA-1 |
| chr1_2 | CDS | 14336267 | 14336347 | 14336267 | ID=Msa0058060-mRNA-1:cds;Parent=Msa0058060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
