AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0059570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0059570 MtrunA17_Chr1g0158861 97.207 716 20 0 1 716 1 716 0.0 1447
Msa0059570 MtrunA17_Chr3g0126541 79.190 716 143 4 3 716 2 713 0.0 1171
Msa0059570 MtrunA17_Chr7g0275581 63.231 718 241 8 8 712 7 714 0.0 879
Msa0059570 MtrunA17_Chr8g0347121 56.208 749 261 11 3 711 2 723 0.0 806
Msa0059570 MtrunA17_Chr4g0073941 56.028 705 290 9 19 715 37 729 0.0 778
Msa0059570 MtrunA17_Chr3g0139071 49.731 744 321 11 4 716 3 724 0.0 710
Msa0059570 MtrunA17_Chr2g0305771 51.348 705 295 12 36 714 5 687 0.0 700
Msa0059570 MtrunA17_Chr4g0001481 49.864 736 329 10 5 712 14 737 0.0 699
Msa0059570 MtrunA17_Chr2g0326871 53.594 640 276 8 83 714 77 703 0.0 694
Msa0059570 MtrunA17_Chr4g0028861 52.722 643 267 8 5 640 69 681 0.0 678
Msa0059570 MtrunA17_Chr7g0228181 50.230 651 299 7 80 715 41 681 0.0 671
Msa0059570 MtrunA17_Chr1g0181121 51.633 643 295 7 83 714 44 681 0.0 668
Msa0059570 MtrunA17_Chr3g0125651 48.336 691 314 10 57 712 5 687 0.0 650
Msa0059570 MtrunA17_Chr6g0481021 38.687 579 323 13 83 640 123 690 2.14e-126 392
Msa0059570 MtrunA17_Chr6g0480671 37.984 645 351 15 27 650 149 765 7.84e-125 389
Msa0059570 MtrunA17_Chr6g0480851 35.703 619 360 13 53 644 143 750 3.24e-121 380
Msa0059570 MtrunA17_Chr8g0360821 35.690 580 346 11 84 645 63 633 1.74e-120 375
Msa0059570 MtrunA17_Chr6g0480781 34.713 628 362 18 55 650 130 741 6.66e-119 374
Msa0059570 MtrunA17_Chr7g0218341 35.495 586 344 11 76 639 102 675 4.21e-114 360
Msa0059570 MtrunA17_Chr6g0480741 31.346 654 387 16 5 633 52 668 2.23e-96 312
Msa0059570 MtrunA17_Chr2g0318561 34.433 485 279 10 199 653 2 477 9.06e-93 297
Msa0059570 MtrunA17_Chr6g0480681 31.373 612 347 18 83 644 115 703 4.53e-88 292
Msa0059570 MtrunA17_Chr5g0395421 35.000 360 204 11 281 623 18 364 5.08e-53 187
Msa0059570 MtrunA17_Chr2g0326861 45.641 195 100 3 158 348 14 206 1.66e-51 178
Msa0059570 MtrunA17_Chr5g0395411 30.827 266 158 4 29 282 107 358 1.77e-41 155
Msa0059570 MtrunA17_Chr6g0480771 35.178 253 139 7 400 638 12 253 2.07e-35 135
Msa0059570 MtrunA17_Chr6g0480841 39.196 199 99 6 454 638 2 192 3.04e-32 124
Msa0059570 MtrunA17_Chr2g0326851 48.630 146 50 5 579 714 3 133 1.68e-31 119
Msa0059570 MtrunA17_Chr6g0480791 30.675 163 101 3 55 205 133 295 3.67e-23 100
Msa0059570 MtrunA17_Chr6g0480751 35.294 119 77 0 82 200 97 215 3.99e-21 93.2
Msa0059570 MtrunA17_Chr6g0480821 29.834 181 117 8 186 360 10 186 2.42e-16 78.6
Msa0059570 MtrunA17_Chr2g0318551 33.077 130 81 2 74 202 54 178 8.41e-16 77.0
Msa0059570 MtrunA17_Chr2g0277651 20.702 541 339 17 78 611 60 517 1.18e-15 81.3
Msa0059570 MtrunA17_Chr4g0063141 18.990 416 264 9 145 557 96 441 5.47e-14 75.9
Msa0059570 MtrunA17_Chr6g0480761 26.994 163 100 4 209 360 8 162 3.31e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0059570 AT5G53130.1 75.661 719 165 5 3 715 2 716 0.0 1105
Msa0059570 AT4G01010.1 59.331 718 257 8 3 712 2 692 0.0 870
Msa0059570 AT4G01010.2 59.331 718 257 8 3 712 2 692 0.0 870
Msa0059570 AT1G01340.2 58.207 725 272 8 3 715 2 707 0.0 857
Msa0059570 AT1G01340.1 59.233 704 267 6 27 715 4 702 0.0 856
Msa0059570 AT2G46430.1 58.530 721 277 7 1 715 1 705 0.0 853
Msa0059570 AT2G46430.2 58.530 721 277 7 1 715 1 705 0.0 853
Msa0059570 AT5G57940.1 54.420 724 306 9 5 714 4 717 0.0 788
Msa0059570 AT5G57940.2 54.420 724 306 9 5 714 4 717 0.0 788
Msa0059570 AT2G23980.9 54.384 730 315 10 5 716 18 747 0.0 787
Msa0059570 AT2G23980.10 54.384 730 315 10 5 716 18 747 0.0 787
Msa0059570 AT2G23980.1 54.384 730 315 10 5 716 18 747 0.0 787
Msa0059570 AT2G23980.4 54.384 730 315 10 5 716 18 747 0.0 787
Msa0059570 AT2G23980.5 54.384 730 315 10 5 716 18 747 0.0 787
Msa0059570 AT5G57940.3 55.000 720 301 10 5 714 4 710 0.0 787
Msa0059570 AT2G23980.6 55.540 695 297 7 34 716 26 720 0.0 781
Msa0059570 AT4G30560.1 53.931 725 306 8 7 715 19 731 0.0 778
Msa0059570 AT4G30560.4 53.931 725 306 8 7 715 19 731 0.0 778
Msa0059570 AT4G30560.5 58.230 644 251 5 79 715 73 705 0.0 776
Msa0059570 AT4G30560.2 58.230 644 251 5 79 715 73 705 0.0 776
Msa0059570 AT4G30560.3 58.230 644 251 5 79 715 73 705 0.0 776
Msa0059570 AT2G23980.3 52.855 753 314 11 5 716 18 770 0.0 775
Msa0059570 AT2G23980.2 52.855 753 314 11 5 716 18 770 0.0 775
Msa0059570 AT2G23980.8 52.855 753 314 11 5 716 18 770 0.0 775
Msa0059570 AT2G23980.7 52.855 753 314 11 5 716 18 770 0.0 775
Msa0059570 AT1G19780.1 51.197 752 315 11 5 714 10 751 0.0 757
Msa0059570 AT1G15990.1 51.757 740 310 10 5 711 10 735 0.0 743
Msa0059570 AT2G28260.1 53.917 651 270 7 71 714 51 678 0.0 699
Msa0059570 AT2G28260.2 53.917 651 270 7 71 714 11 638 0.0 699
Msa0059570 AT2G24610.1 49.001 751 317 15 4 715 3 726 0.0 694
Msa0059570 AT2G24610.2 48.993 745 317 14 7 715 24 741 0.0 691
Msa0059570 AT4G30360.1 50.906 662 286 10 81 715 69 718 0.0 676
Msa0059570 AT3G48010.1 48.791 703 308 13 54 711 9 704 0.0 667
Msa0059570 AT5G14870.1 48.220 674 306 8 80 716 37 704 0.0 650
Msa0059570 AT2G46440.1 52.019 619 279 10 64 672 11 621 0.0 624
Msa0059570 AT1G19780.2 53.931 547 213 7 199 714 2 540 0.0 589
Msa0059570 AT2G46450.4 46.073 662 323 14 64 715 11 648 0.0 573
Msa0059570 AT2G46450.1 46.073 662 323 14 64 715 11 648 0.0 573
Msa0059570 AT2G46450.2 44.713 662 309 16 64 715 11 625 0.0 538
Msa0059570 AT2G46450.3 44.970 656 304 16 70 715 4 612 0.0 537
Msa0059570 AT2G46440.2 57.494 447 176 8 236 672 1 443 3.53e-171 498
Msa0059570 AT3G17690.1 37.543 578 326 15 83 642 158 718 2.28e-122 382
Msa0059570 AT3G17700.1 37.770 601 330 15 60 633 162 745 3.61e-117 370
Msa0059570 AT5G54250.2 34.192 582 360 9 82 645 78 654 7.22e-111 351
Msa0059570 AT5G54250.1 34.192 582 360 9 82 645 78 654 7.22e-111 351
Msa0059570 AT5G54250.4 34.192 582 360 9 82 645 78 654 7.22e-111 351
Msa0059570 AT5G15410.1 34.843 574 352 9 78 633 108 677 3.58e-110 350
Msa0059570 AT5G15410.2 34.843 574 352 9 78 633 107 676 3.88e-110 350
Msa0059570 AT3G17690.2 37.271 491 283 10 83 564 158 632 9.08e-107 339
Msa0059570 AT5G54250.3 33.677 582 358 10 82 645 78 649 9.46e-106 338
Msa0059570 AT3G17700.2 37.761 527 296 12 60 571 162 671 2.22e-104 334
Msa0059570 AT3G17690.3 34.783 368 222 8 83 441 158 516 8.44e-71 240
Msa0059570 AT4G22200.2 20.798 476 297 14 83 557 67 463 1.48e-14 77.8
Msa0059570 AT4G22200.1 21.343 417 257 12 143 557 116 463 4.21e-14 76.6

Find 162 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGCTCTTTCTCGAAATTT+TGG 0.135945 1_2:-16746672 Msa0059570:CDS
ATTTGTAATGTTCAGGTTTC+AGG 0.149806 1_2:-16746865 Msa0059570:intron
GGTGCCAATGTTTGAGAAAA+TGG 0.231224 1_2:-16742321 Msa0059570:CDS
GCATGTTCACCTTTCTTATA+TGG 0.239411 1_2:+16741535 None:intergenic
GTGCCACCATATATGCTTCT+AGG 0.243974 1_2:-16741770 Msa0059570:CDS
ATGTCCCTTCGTAAATCTTT+TGG 0.270731 1_2:+16742577 None:intergenic
GCATGTGGTTTCTCGTTCTA+TGG 0.271299 1_2:+16744302 None:intergenic
GCACGTTCACCTTTCCTATA+TGG 0.272191 1_2:+16741486 None:intergenic
TCTGACTGTCCTAGTGGATA+TGG 0.273875 1_2:+16742052 None:intergenic
GCTCCTTCTTCTCGAGTATT+TGG 0.279018 1_2:-16746405 Msa0059570:CDS
GAAAATGGACGAACAACTTT+TGG 0.279149 1_2:-16742306 Msa0059570:CDS
GATTTAAAGCCGCTCATCTT+TGG 0.283787 1_2:+16746156 None:intergenic
TTTAGGTCCTTGGTGCCTTT+TGG 0.289022 1_2:-16744335 Msa0059570:intron
GAAGCAACAGTAAGAATAAT+AGG 0.298454 1_2:-16747389 Msa0059570:five_prime_UTR
CTTGTAACTTCTTTATATAA+TGG 0.307930 1_2:+16746063 None:intergenic
TCAGTAAAGTTAGGTTCTTC+AGG 0.324654 1_2:+16741654 None:intergenic
TCGCCCACCGTTAGTTGTTA+TGG 0.326544 1_2:+16742172 None:intergenic
AATGACATTTCGCTAGAATA+TGG 0.328088 1_2:-16741561 Msa0059570:three_prime_UTR
TTTCATTGCCATAGCTGGTT+TGG 0.336143 1_2:-16743840 Msa0059570:CDS
TGGAGGAGATGAGAGTAAAA+AGG 0.337050 1_2:-16742729 Msa0059570:CDS
ATATGTCTAGTTTATTAGTT+AGG 0.339002 1_2:-16741598 Msa0059570:three_prime_UTR
TTTCAAAGGGGACTTGAATC+TGG 0.346112 1_2:-16746747 Msa0059570:CDS
TTGTTGTTGTATACATGGTT+AGG 0.353097 1_2:-16747496 Msa0059570:five_prime_UTR
ATTTAAAGCCGCTCATCTTT+GGG 0.362625 1_2:+16746157 None:intergenic
CAATGAATCCAGTACGAAAC+TGG 0.363862 1_2:+16746427 None:intergenic
TGTTCATCATCAGTAAAGTT+AGG 0.374133 1_2:+16741645 None:intergenic
AGTTTGTGGCGTCTCAATTC+CGG 0.377546 1_2:-16741983 Msa0059570:CDS
AGCAAACCTAGAAGCATATA+TGG 0.380387 1_2:+16741764 None:intergenic
AATATGTGCCTCGTTTATTA+CGG 0.382499 1_2:-16746092 Msa0059570:CDS
AATGGCATTTCGCTAGAATA+TGG 0.386170 1_2:-16741512 Msa0059570:three_prime_UTR
CTCTTGTTGAAGAGGAGAAC+AGG 0.389753 1_2:-16741839 Msa0059570:CDS
GAATGATTCTTGCCCAATAC+AGG 0.390959 1_2:-16744187 Msa0059570:CDS
GTATGAGGTACGAGGATCTA+AGG 0.391846 1_2:+16742082 None:intergenic
AATGACATTTCGCTAGAATA+TGG 0.399599 1_2:-16741463 Msa0059570:three_prime_UTR
ACCGCCTGATTCGCTCTCTA+AGG 0.399785 1_2:+16742662 None:intergenic
GTAATAAACGAGGCACATAT+TGG 0.407011 1_2:+16746094 None:intergenic
ATGCGTTATTGCGGTATCAT+TGG 0.408508 1_2:-16746580 Msa0059570:CDS
ATTGTCTTCATTTACACCTC+TGG 0.409038 1_2:+16742615 None:intergenic
CTAGAATATGGTGTCCATAT+AGG 0.410651 1_2:-16741500 Msa0059570:three_prime_UTR
AAAGAAGTTACAAGAACATC+TGG 0.421199 1_2:-16746054 Msa0059570:CDS
CATCAACGGGATCTCCTTCT+CGG 0.421393 1_2:+16742228 None:intergenic
GGTGGTAACACAACAAGTTT+AGG 0.421985 1_2:-16741792 Msa0059570:CDS
ACAACTAACGGTGGGCGAAC+CGG 0.422590 1_2:-16742167 Msa0059570:CDS
ACGACCTTAGAGAGCGAATC+AGG 0.426129 1_2:-16742666 Msa0059570:CDS
TTCAGCAAGAGAAGTTTGTT+AGG 0.433240 1_2:-16747348 Msa0059570:intron
ATCCTTTATCGCAGCTCTCT+TGG 0.434759 1_2:-16743911 Msa0059570:intron
TTCCTTGATGCCCTTCAATC+CGG 0.445143 1_2:-16744132 Msa0059570:CDS
GGCGAAGCTGCTTGCTATGA+AGG 0.445260 1_2:+16741958 None:intergenic
CATTAAGCGTCATCTTTGCT+TGG 0.450954 1_2:-16742557 Msa0059570:CDS
GCAGTCAACACAAACAAGAT+TGG 0.455370 1_2:-16742749 Msa0059570:CDS
AGATATGTATTGCAATCCTC+GGG 0.458896 1_2:-16744238 Msa0059570:CDS
CTTTGTTCTGTGTAAAGCAC+TGG 0.459350 1_2:+16742260 None:intergenic
TTCATTTGTTGTTGTATACA+TGG 0.460537 1_2:-16747501 Msa0059570:five_prime_UTR
ACTCGCAACACTGGCGCACA+TGG 0.461550 1_2:-16741920 Msa0059570:CDS
ATGAAGAGCATCTCATCAAC+GGG 0.464668 1_2:+16742215 None:intergenic
TAGTATACAGTTAATGTGAT+TGG 0.469387 1_2:-16741621 Msa0059570:three_prime_UTR
ACTCCACAACACCGGATTGA+AGG 0.472580 1_2:+16744121 None:intergenic
ATTCGCTCTCTAAGGTCGTC+AGG 0.477844 1_2:+16742670 None:intergenic
TGAAAATAAATGCCTTTCAC+TGG 0.479019 1_2:-16746523 Msa0059570:CDS
CATTCTCACTGAAACAGCTT+GGG 0.480890 1_2:-16746031 Msa0059570:CDS
CCTTTGAAACTTCTCAGAAA+AGG 0.481319 1_2:+16746761 None:intergenic
CTGACTGTCCTAGTGGATAT+GGG 0.484519 1_2:+16742053 None:intergenic
TGAAGAGTCTCTTGTTGAAG+AGG 0.486332 1_2:-16741847 Msa0059570:CDS
ATTCCTCATTGGAAATATGC+AGG 0.487391 1_2:-16743807 Msa0059570:intron
AAGGAAAATCCTCGATCCGC+AGG 0.488206 1_2:-16746643 Msa0059570:CDS
GACTGTGTTATCTTAAATGC+AGG 0.490091 1_2:+16746810 None:intergenic
TGCGATTCTTCCACTCCCAC+AGG 0.493300 1_2:-16746307 Msa0059570:intron
TCTTCTCGAGTATTTGGAAG+AGG 0.496052 1_2:-16746399 Msa0059570:CDS
GCATTTAAGATAACACAGTC+GGG 0.498933 1_2:-16746807 Msa0059570:CDS
GGCGGTATGATCAGTACAAA+TGG 0.500306 1_2:-16742645 Msa0059570:CDS
GCATTCTCACTGAAACAGCT+TGG 0.504733 1_2:-16746032 Msa0059570:CDS
GGATATGGGAAGGTTGTATG+AGG 0.507004 1_2:+16742067 None:intergenic
CAGATATGTATTGCAATCCT+CGG 0.512412 1_2:-16744239 Msa0059570:CDS
CTTGTGCTTTGTTTGATACA+CGG 0.517828 1_2:-16747473 Msa0059570:five_prime_UTR
TCTAGTTTATTAGTTAGGAA+TGG 0.519034 1_2:-16741593 Msa0059570:three_prime_UTR
GGCTTCTGAAGCAATATAGC+AGG 0.526443 1_2:+16741675 None:intergenic
ATTCTTGGGTAATTGCTAAG+AGG 0.526597 1_2:-16746362 Msa0059570:CDS
TATGGAAAACAAGTACCAAA+AGG 0.526832 1_2:+16744320 None:intergenic
CTCCACAACACCGGATTGAA+GGG 0.527168 1_2:+16744122 None:intergenic
GTGGAGAGGAGCTTCTCACA+TGG 0.528018 1_2:-16742106 Msa0059570:CDS
AAGGGGCATACCTGTGGGAG+TGG 0.528643 1_2:+16746297 None:intergenic
GTGGCACCGCAAGGAAGACA+AGG 0.531536 1_2:-16741713 Msa0059570:CDS
GAGCATTGTCATAGTGATGA+TGG 0.532853 1_2:+16746688 None:intergenic
AAATGTGTGTTCAGTATTGA+CGG 0.535551 1_2:+16747522 None:intergenic
AATTCTGAGTACTTAAAAGC+CGG 0.535689 1_2:-16742137 Msa0059570:CDS
AGAGAAAGTTCTCAGAAAAG+TGG 0.537376 1_2:+16746479 None:intergenic
CTCACTGAAACAGCTTGGGC+GGG 0.537789 1_2:-16746027 Msa0059570:CDS
CCATCCCTCTGTCCAGTGAA+AGG 0.538494 1_2:+16746511 None:intergenic
CACCGGATTGAAGGGCATCA+AGG 0.539604 1_2:+16744130 None:intergenic
AAATAACACCAAACCAGCTA+TGG 0.540804 1_2:+16743832 None:intergenic
GAACAGGCTGAAAGATGCAT+TGG 0.540920 1_2:-16741823 Msa0059570:CDS
AGCCGACGATCTGAAGTTTG+TGG 0.543664 1_2:-16741997 Msa0059570:CDS
CAAAGTTATGTTGTCCGAGA+AGG 0.547401 1_2:-16742242 Msa0059570:CDS
GTACTCAGAATTGAAGAAGC+CGG 0.549709 1_2:+16742148 None:intergenic
CTTCCAAATACTCGAGAAGA+AGG 0.556523 1_2:+16746402 None:intergenic
GTTTCAGGATTCTAATTCTG+AGG 0.557972 1_2:-16746850 Msa0059570:CDS
CTCGCAACACTGGCGCACAT+GGG 0.563347 1_2:-16741919 Msa0059570:CDS
CCTTTCACTGGACAGAGGGA+TGG 0.565354 1_2:-16746511 Msa0059570:CDS
TTGCTTGGATTTGTTGATGA+GGG 0.566651 1_2:-16742542 Msa0059570:intron
AACAAACTTCTCTTGCTGAA+AGG 0.567167 1_2:+16747351 None:intergenic
TATGAAGAGCATCTCATCAA+CGG 0.568085 1_2:+16742214 None:intergenic
TGCCCTTCAATCCGGTGTTG+TGG 0.568752 1_2:-16744124 Msa0059570:CDS
TGCATTTAAGATAACACAGT+CGG 0.569042 1_2:-16746808 Msa0059570:CDS
TCTCACTGAAACAGCTTGGG+CGG 0.569539 1_2:-16746028 Msa0059570:CDS
ACACGCTTCTTGCCAGCATG+TGG 0.571443 1_2:+16744287 None:intergenic
TTAAAAGCCGGCGACTTCTG+TGG 0.572247 1_2:-16742125 Msa0059570:CDS
TAAGAAAGGTGAACATGCAA+TGG 0.574584 1_2:-16741530 Msa0059570:three_prime_UTR
CTGGTTCTGAGAGGATAAAG+AGG 0.576067 1_2:-16746728 Msa0059570:CDS
TGGAGAGGAGCTTCTCACAT+GGG 0.577199 1_2:-16742105 Msa0059570:CDS
ATCTCTCGACTCCACAACAC+CGG 0.577297 1_2:+16744113 None:intergenic
ATATGGCGTCCATATAAGAA+AGG 0.577453 1_2:-16741544 Msa0059570:three_prime_UTR
TGTCTTGTTATGCGTTATTG+CGG 0.579189 1_2:-16746589 Msa0059570:CDS
TCGCAACAATCTGAGTGCAT+TGG 0.579349 1_2:+16741740 None:intergenic
GCTGCTTGCTATGAAGGCGC+CGG 0.580467 1_2:+16741964 None:intergenic
AGGGTACCTTCCTTCAAAAG+TGG 0.582930 1_2:-16746623 Msa0059570:CDS
AAAGATGCATTGGCAAAGAC+TGG 0.590404 1_2:-16741813 Msa0059570:CDS
TTTGCTTGGATTTGTTGATG+AGG 0.591329 1_2:-16742543 Msa0059570:CDS
CTCAGATTGTTGCGACGAAG+TGG 0.591673 1_2:-16741732 Msa0059570:CDS
AATGCCTTTCACTGGACAGA+GGG 0.592225 1_2:-16746515 Msa0059570:CDS
TCAGATTCTACTCGCAACAC+TGG 0.594194 1_2:-16741929 Msa0059570:CDS
GTCAACACAAACAAGATTGG+AGG 0.594465 1_2:-16742746 Msa0059570:CDS
TACGAAACTGGAAAATCATG+TGG 0.596501 1_2:+16746439 None:intergenic
CGCCACAAACTTCAGATCGT+CGG 0.602536 1_2:+16741995 None:intergenic
GATTGTTCTGACTGTCCTAG+TGG 0.606259 1_2:+16742046 None:intergenic
ATCTTCCAAAAGATTTACGA+AGG 0.608350 1_2:-16742582 Msa0059570:CDS
GGAAGGTACCCTGCGGATCG+AGG 0.618544 1_2:+16746634 None:intergenic
AGCCGGCGACTTCTGTGGAG+AGG 0.619188 1_2:-16742120 Msa0059570:CDS
TAGCGCCCTTGTCTTCCTTG+CGG 0.622844 1_2:+16741707 None:intergenic
CTATTGACCATAACAACTAA+CGG 0.624244 1_2:-16742179 Msa0059570:CDS
CTCCTCTCCACAGAAGTCGC+CGG 0.626321 1_2:+16742118 None:intergenic
AGGAAAATCCTCGATCCGCA+GGG 0.629580 1_2:-16746642 Msa0059570:CDS
TAGAACGAGAAACCACATGC+TGG 0.631488 1_2:-16744299 Msa0059570:CDS
ATATGGTGTCCATATAGGAA+AGG 0.633894 1_2:-16741495 Msa0059570:three_prime_UTR
TGCGACGAAGTGGCACCGCA+AGG 0.637606 1_2:-16741722 Msa0059570:CDS
ACAGGAACATAAAAGAACAA+AGG 0.643607 1_2:+16746555 None:intergenic
TGACCATAACAACTAACGGT+GGG 0.644773 1_2:-16742175 Msa0059570:CDS
ACAAGTACCAAAAGGCACCA+AGG 0.648978 1_2:+16744328 None:intergenic
TGATTCTTGCCCAATACAGG+AGG 0.650686 1_2:-16744184 Msa0059570:CDS
CTGTCCTAGTGGATATGGGA+AGG 0.651029 1_2:+16742057 None:intergenic
TGTAAAGCACTGGTTTAAGA+CGG 0.656531 1_2:+16742270 None:intergenic
GAGATGCTCTTCATAATGCG+AGG 0.659582 1_2:-16742206 Msa0059570:CDS
AAATGCCTTTCACTGGACAG+AGG 0.659943 1_2:-16746516 Msa0059570:CDS
ACAACCTTCCCATATCCACT+AGG 0.664340 1_2:-16742061 Msa0059570:CDS
ACCTTAGAGAGCGAATCAGG+CGG 0.668737 1_2:-16742663 Msa0059570:CDS
GATGCATTGGCAAAGACTGG+TGG 0.669183 1_2:-16741810 Msa0059570:CDS
TCTTCCAAAAGATTTACGAA+GGG 0.670836 1_2:-16742581 Msa0059570:CDS
ATACCTGCATATTTCCAATG+AGG 0.676782 1_2:+16743804 None:intergenic
AAGTAATAACATGTGTAACA+CGG 0.677689 1_2:-16744262 Msa0059570:CDS
TGGCACCGCAAGGAAGACAA+GGG 0.678735 1_2:-16741712 Msa0059570:CDS
ATGTATTGCAATCCTCGGGG+AGG 0.679614 1_2:-16744234 Msa0059570:CDS
AAAGGAGGGATGCAGAACAG+TGG 0.684120 1_2:-16742711 Msa0059570:CDS
GCGAGTAGAATCTGAAAGTG+TGG 0.692822 1_2:+16741937 None:intergenic
CATTTAAGATAACACAGTCG+GGG 0.693112 1_2:-16746806 Msa0059570:CDS
GACTTGAATCTGGTTCTGAG+AGG 0.694024 1_2:-16746737 Msa0059570:CDS
TTGACCATAACAACTAACGG+TGG 0.698542 1_2:-16742176 Msa0059570:CDS
GTTATCATCCCAAAGATGAG+CGG 0.699200 1_2:-16746165 Msa0059570:CDS
AAACCTAGAAGCATATATGG+TGG 0.700365 1_2:+16741767 None:intergenic
TACAAATGGCAAGAAACCAG+AGG 0.707748 1_2:-16742631 Msa0059570:CDS
GGAATTATCCGTAATAAACG+AGG 0.723539 1_2:+16746084 None:intergenic
GGAAGGTTGTATGAGGTACG+AGG 0.735650 1_2:+16742074 None:intergenic
GATATGTATTGCAATCCTCG+GGG 0.760381 1_2:-16744237 Msa0059570:CDS
ATAGACTTAAAACCTCCCCG+AGG 0.805493 1_2:+16744222 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAACAATTAATAAATATA+TGG - chr1_2:16743688-16743707 Msa0059570:intron 10.0%
!!! AATTTTTTACGTTTATTTTA+TGG - chr1_2:16743729-16743748 Msa0059570:intron 10.0%
!!! AGAATTATAAAACTAAATTT+TGG + chr1_2:16745406-16745425 None:intergenic 10.0%
!!! AATGAAAAAAGAAAAATTTT+TGG + chr1_2:16745580-16745599 None:intergenic 10.0%
!! AAATAGATGATTAAAAAAAT+TGG + chr1_2:16746567-16746586 None:intergenic 10.0%
!!! TCATTGATAATTTAAGAAAA+TGG - chr1_2:16742065-16742084 Msa0059570:CDS 15.0%
!!! ATTTTTTATTTGTAATGTTC+AGG - chr1_2:16742202-16742221 Msa0059570:CDS 15.0%
!! TAAACCATTAACATATTAAA+GGG + chr1_2:16742798-16742817 None:intergenic 15.0%
!! ATAAACCATTAACATATTAA+AGG + chr1_2:16742799-16742818 None:intergenic 15.0%
!! CATGTAATAGAAATAAATAT+TGG + chr1_2:16743164-16743183 None:intergenic 15.0%
!! AATTATTTACATTCTATTTC+TGG - chr1_2:16743192-16743211 Msa0059570:intron 15.0%
!!! ATTATTTACATTCTATTTCT+GGG - chr1_2:16743193-16743212 Msa0059570:intron 15.0%
!!! TTAAAAAGGTATATAGTTAA+CGG + chr1_2:16743242-16743261 None:intergenic 15.0%
!!! TATTTTATGGACATTATTTT+AGG - chr1_2:16743742-16743761 Msa0059570:intron 15.0%
!! ATTTGATGTTTATTAGAAAA+TGG + chr1_2:16744178-16744197 None:intergenic 15.0%
!!! GATAAAAAACTATTTGATTT+TGG - chr1_2:16744915-16744934 Msa0059570:intron 15.0%
!! TTACAAATAAAGCAAAATAA+GGG - chr1_2:16746124-16746143 Msa0059570:CDS 15.0%
!! AATATTTGATCTATGAAACA+CGG - chr1_2:16742000-16742019 Msa0059570:CDS 20.0%
!! AAACCATTAACATATTAAAG+GGG + chr1_2:16742797-16742816 None:intergenic 20.0%
!! CTTGTAACTTCTTTATATAA+TGG + chr1_2:16743014-16743033 None:intergenic 20.0%
!!! TTTCTATTTCCAAGATTTTA+TGG - chr1_2:16743482-16743501 Msa0059570:intron 20.0%
!!! TTCTTGTGAATATTTTTTTG+AGG - chr1_2:16743515-16743534 Msa0059570:intron 20.0%
!!! TTTTTTGAGGTTTTAATTGT+TGG - chr1_2:16743528-16743547 Msa0059570:intron 20.0%
!!! TCACTTAAAGAAACATATTT+TGG + chr1_2:16743593-16743612 None:intergenic 20.0%
!!! TCAATCTTAAATATTTTGAG+TGG + chr1_2:16743632-16743651 None:intergenic 20.0%
!! TGTTAAAGTAATGTAACAAA+TGG + chr1_2:16744293-16744312 None:intergenic 20.0%
!!! ATTTTTGTGCATTTTGTTTA+CGG - chr1_2:16744398-16744417 Msa0059570:intron 20.0%
!!! AAAAAAAGAAAACTTGTTCA+TGG - chr1_2:16744469-16744488 Msa0059570:intron 20.0%
!!! GGATTTAAACAAACAATTTT+TGG + chr1_2:16744618-16744637 None:intergenic 20.0%
!!! CTAAGTTATTTGTTTTGTTT+AGG - chr1_2:16744722-16744741 Msa0059570:intron 20.0%
!! TGAATGATTAAAAGAAACTT+TGG + chr1_2:16745309-16745328 None:intergenic 20.0%
!!! TAAATTTTGGAAATCACAAA+AGG + chr1_2:16745393-16745412 None:intergenic 20.0%
!! TTGTAGAAATAGGAAAATAA+AGG + chr1_2:16745670-16745689 None:intergenic 20.0%
!! ATATCAAGAATTGTAGAAAT+AGG + chr1_2:16745680-16745699 None:intergenic 20.0%
!!! GGTCATAAATGATTTATTTT+AGG + chr1_2:16745767-16745786 None:intergenic 20.0%
!!! AAAATTTTTACGCATATACA+TGG + chr1_2:16745914-16745933 None:intergenic 20.0%
!! ATTCATATGCTACAATTTAA+CGG - chr1_2:16745952-16745971 Msa0059570:intron 20.0%
!! GTTACAAATAAAGCAAAATA+AGG - chr1_2:16746123-16746142 Msa0059570:CDS 20.0%
!! ACTTGATACATTATATCAAA+AGG - chr1_2:16746587-16746606 Msa0059570:CDS 20.0%
!! AAACAAAATATCATTGCTAT+TGG - chr1_2:16746646-16746665 Msa0059570:CDS 20.0%
!!! ATATGTCTAGTTTATTAGTT+AGG - chr1_2:16747476-16747495 Msa0059570:five_prime_UTR 20.0%
!!! TTCATTTGTTGTTGTATACA+TGG - chr1_2:16741573-16741592 Msa0059570:three_prime_UTR 25.0%
! AGTTGTTTAGTCTACATATT+TGG - chr1_2:16741956-16741975 Msa0059570:CDS 25.0%
! TTTAGTCTACATATTTGGTT+AGG - chr1_2:16741961-16741980 Msa0059570:CDS 25.0%
! ATATTTGATCTATGAAACAC+GGG - chr1_2:16742001-16742020 Msa0059570:CDS 25.0%
! CTACCTTATAAAATATTGCT+AGG - chr1_2:16742875-16742894 Msa0059570:intron 25.0%
!!! ATACCTTTTTAATTTTGTGC+TGG - chr1_2:16743250-16743269 Msa0059570:intron 25.0%
! TCTTTAGTACCATAAAATCT+TGG + chr1_2:16743494-16743513 None:intergenic 25.0%
!! TAATTTGTAAACATTGTTCC+TGG - chr1_2:16743912-16743931 Msa0059570:intron 25.0%
! TCTTCTACCATATTAAGTTA+TGG - chr1_2:16743957-16743976 Msa0059570:intron 25.0%
!! ATAAAACAAAGTGTTCAAGT+AGG + chr1_2:16744018-16744037 None:intergenic 25.0%
! ATCAAAAAGTTTAAGCTGTT+AGG + chr1_2:16744080-16744099 None:intergenic 25.0%
!! AATTTCAAATTTTCAGCACA+AGG - chr1_2:16744195-16744214 Msa0059570:CDS 25.0%
! AAGAATGATACAAATGACAA+AGG + chr1_2:16744497-16744516 None:intergenic 25.0%
!! TCACAAAATTACAGTATTGA+CGG - chr1_2:16744661-16744680 Msa0059570:intron 25.0%
! AAGTAATAACATGTGTAACA+CGG - chr1_2:16744812-16744831 Msa0059570:intron 25.0%
!!! AAGCACACCTTAAATTTTTT+AGG + chr1_2:16745022-16745041 None:intergenic 25.0%
!! AATTTTGTAAACTTGATTGC+CGG - chr1_2:16745356-16745375 Msa0059570:intron 25.0%
! GAAATCACAAAAGGTAAAAT+GGG + chr1_2:16745384-16745403 None:intergenic 25.0%
! GTCAATCAAGAGTTATTAAA+TGG - chr1_2:16745628-16745647 Msa0059570:intron 25.0%
! AAATAGGAAAATAAAGGTCA+GGG + chr1_2:16745664-16745683 None:intergenic 25.0%
! AAAACTACAACTTATATTGC+AGG + chr1_2:16745800-16745819 None:intergenic 25.0%
!! ATTTTGCAGTTGAGATTTTT+TGG - chr1_2:16745929-16745948 Msa0059570:intron 25.0%
!!! TAAACCTTATTTTTCTTCCT+TGG - chr1_2:16746101-16746120 Msa0059570:CDS 25.0%
!!! TTTTGCTTTATTTGTAACCA+AGG + chr1_2:16746121-16746140 None:intergenic 25.0%
!!! ATAAGGGACATTTTTTTATC+AGG - chr1_2:16746140-16746159 Msa0059570:CDS 25.0%
! TCAAAACTCAAAAACAACTA+TGG + chr1_2:16746191-16746210 None:intergenic 25.0%
! ATATTAATGTGAGTTTCTCA+TGG + chr1_2:16746218-16746237 None:intergenic 25.0%
!! TTATTAGGTTACTTTCTTCT+AGG - chr1_2:16746259-16746278 Msa0059570:intron 25.0%
!!! TACTTTCTTCTAGGTTTTAA+CGG - chr1_2:16746268-16746287 Msa0059570:intron 25.0%
!!! ATATTTTGTTTGCATTGCAA+GGG + chr1_2:16746637-16746656 None:intergenic 25.0%
! AAGATCAAAGATTACATAGT+TGG - chr1_2:16746669-16746688 Msa0059570:CDS 25.0%
! TAGTATACAGTTAATGTGAT+TGG - chr1_2:16747453-16747472 Msa0059570:five_prime_UTR 25.0%
!! TCTAGTTTATTAGTTAGGAA+TGG - chr1_2:16747481-16747500 Msa0059570:five_prime_UTR 25.0%
! AAATGTGTGTTCAGTATTGA+CGG + chr1_2:16741555-16741574 None:intergenic 30.0%
! TTGTTGTTGTATACATGGTT+AGG - chr1_2:16741578-16741597 Msa0059570:three_prime_UTR 30.0%
GAAGCAACAGTAAGAATAAT+AGG - chr1_2:16741685-16741704 Msa0059570:CDS 30.0%
!!! TGATTTTTTGTTGCTGTCTT+TGG - chr1_2:16741787-16741806 Msa0059570:CDS 30.0%
! AATTTCAAAGCACTTTGATG+TGG + chr1_2:16741901-16741920 None:intergenic 30.0%
AAATATTCCTCTACACAAGA+CGG + chr1_2:16741987-16742006 None:intergenic 30.0%
! ATTTGTAATGTTCAGGTTTC+AGG - chr1_2:16742209-16742228 Msa0059570:CDS 30.0%
! TGCATTTAAGATAACACAGT+CGG - chr1_2:16742266-16742285 Msa0059570:CDS 30.0%
!! CTTTTCTGAGAAGTTTCAAA+GGG - chr1_2:16742314-16742333 Msa0059570:CDS 30.0%
!! TTTTCTGAGAAGTTTCAAAG+GGG - chr1_2:16742315-16742334 Msa0059570:CDS 30.0%
! AATGCTCTTTCTCGAAATTT+TGG - chr1_2:16742402-16742421 Msa0059570:intron 30.0%
!! ATATCTTGTTCCACTTTTGA+AGG + chr1_2:16742464-16742483 None:intergenic 30.0%
ACAGGAACATAAAAGAACAA+AGG + chr1_2:16742522-16742541 None:intergenic 30.0%
! TTTTATGTTCCTGTGATTGA+TGG - chr1_2:16742528-16742547 Msa0059570:intron 30.0%
! TTATTTTCACCATCAATCAC+AGG + chr1_2:16742540-16742559 None:intergenic 30.0%
TGAAAATAAATGCCTTTCAC+TGG - chr1_2:16742551-16742570 Msa0059570:CDS 30.0%
!!! TGTTTTGATCGATGATTCTT+GGG - chr1_2:16742698-16742717 Msa0059570:CDS 30.0%
ATGCCCCTTTAATATGTTAA+TGG - chr1_2:16742791-16742810 Msa0059570:intron 30.0%
! CCACCTAGCAATATTTTATA+AGG + chr1_2:16742881-16742900 None:intergenic 30.0%
CCTTATAAAATATTGCTAGG+TGG - chr1_2:16742878-16742897 Msa0059570:intron 30.0%
AATATGTGCCTCGTTTATTA+CGG - chr1_2:16742982-16743001 Msa0059570:intron 30.0%
AAAGAAGTTACAAGAACATC+TGG - chr1_2:16743020-16743039 Msa0059570:intron 30.0%
! GTTCATTTTGTCTGATCAAT+AGG - chr1_2:16743293-16743312 Msa0059570:intron 30.0%
AGAATTTGTGTGAGGATAAA+GGG + chr1_2:16743439-16743458 None:intergenic 30.0%
TAGAATTTGTGTGAGGATAA+AGG + chr1_2:16743440-16743459 None:intergenic 30.0%
CAATTACTAGAATTTGTGTG+AGG + chr1_2:16743447-16743466 None:intergenic 30.0%
TAGCTTCATTGAATTAAGAC+AGG + chr1_2:16743555-16743574 None:intergenic 30.0%
ATTAGAAAATGGTAGTTGCA+AGG + chr1_2:16744167-16744186 None:intergenic 30.0%
AACTACAATTTCGTACATAG+TGG + chr1_2:16744562-16744581 None:intergenic 30.0%
!!! ATTTGTTTTGTTTAGGTCCT+TGG - chr1_2:16744729-16744748 Msa0059570:intron 30.0%
TATGGAAAACAAGTACCAAA+AGG + chr1_2:16744757-16744776 None:intergenic 30.0%
! TTTTATCTTCCTCCTGTATT+GGG + chr1_2:16744902-16744921 None:intergenic 30.0%
! TTTTTATCTTCCTCCTGTAT+TGG + chr1_2:16744903-16744922 None:intergenic 30.0%
!!! GTGTTATTTTCATTCCTCAT+TGG - chr1_2:16745256-16745275 Msa0059570:intron 30.0%
GGAAATCACAAAAGGTAAAA+TGG + chr1_2:16745385-16745404 None:intergenic 30.0%
AGATAATACCCCAAAATTTC+AGG - chr1_2:16745469-16745488 Msa0059570:intron 30.0%
AACCAAATCACAATCAAACA+AGG + chr1_2:16745495-16745514 None:intergenic 30.0%
GAAATAGGAAAATAAAGGTC+AGG + chr1_2:16745665-16745684 None:intergenic 30.0%
GAAGTTGAATTGTTCATGTA+TGG - chr1_2:16745709-16745728 Msa0059570:intron 30.0%
TATATTGCAGGTTGTAGAAT+CGG + chr1_2:16745788-16745807 None:intergenic 30.0%
! TTTTCTACGCATGAAAACAA+AGG + chr1_2:16745823-16745842 None:intergenic 30.0%
! TGCGTAGAAAATTTTGTAGT+AGG - chr1_2:16745832-16745851 Msa0059570:intron 30.0%
! GCGTAGAAAATTTTGTAGTA+GGG - chr1_2:16745833-16745852 Msa0059570:intron 30.0%
! GAAAATTTTGTAGTAGGGAA+TGG - chr1_2:16745838-16745857 Msa0059570:intron 30.0%
GTAACCAAGGAAGAAAAATA+AGG + chr1_2:16746108-16746127 None:intergenic 30.0%
!!! CATTTTTTTATCAGGATGGA+AGG - chr1_2:16746148-16746167 Msa0059570:CDS 30.0%
ATCTTCCAAAAGATTTACGA+AGG - chr1_2:16746492-16746511 Msa0059570:CDS 30.0%
TCTTCCAAAAGATTTACGAA+GGG - chr1_2:16746493-16746512 Msa0059570:CDS 30.0%
!! GATATTTTGTTTGCATTGCA+AGG + chr1_2:16746638-16746657 None:intergenic 30.0%
ACACAACAGCGAAAAATATT+TGG + chr1_2:16746723-16746742 None:intergenic 30.0%
CTATTGACCATAACAACTAA+CGG - chr1_2:16746895-16746914 Msa0059570:intron 30.0%
AATTCTGAGTACTTAAAAGC+CGG - chr1_2:16746937-16746956 Msa0059570:intron 30.0%
TGTTCATCATCAGTAAAGTT+AGG + chr1_2:16747432-16747451 None:intergenic 30.0%
AATGACATTTCGCTAGAATA+TGG - chr1_2:16747513-16747532 Msa0059570:five_prime_UTR 30.0%
AATGACATTTCGCTAGAATA+TGG - chr1_2:16747513-16747532 Msa0059570:five_prime_UTR 30.0%
!! CTTGTGCTTTGTTTGATACA+CGG - chr1_2:16741601-16741620 Msa0059570:three_prime_UTR 35.0%
AACAAACTTCTCTTGCTGAA+AGG + chr1_2:16741726-16741745 None:intergenic 35.0%
! TTCAGCAAGAGAAGTTTGTT+AGG - chr1_2:16741726-16741745 Msa0059570:CDS 35.0%
!! AGAAGTTTGTTAGGTGAGTT+TGG - chr1_2:16741735-16741754 Msa0059570:CDS 35.0%
CTGATACATAGATACTGACA+CGG - chr1_2:16742032-16742051 Msa0059570:CDS 35.0%
! ACTTCAGATTAAAGGCATGT+CGG + chr1_2:16742146-16742165 None:intergenic 35.0%
GCATCAACACTTCAGATTAA+AGG + chr1_2:16742154-16742173 None:intergenic 35.0%
GTTTCAGGATTCTAATTCTG+AGG - chr1_2:16742224-16742243 Msa0059570:CDS 35.0%
GACTGTGTTATCTTAAATGC+AGG + chr1_2:16742267-16742286 None:intergenic 35.0%
! GCATTTAAGATAACACAGTC+GGG - chr1_2:16742267-16742286 Msa0059570:CDS 35.0%
! CATTTAAGATAACACAGTCG+GGG - chr1_2:16742268-16742287 Msa0059570:CDS 35.0%
!! CCTTTGAAACTTCTCAGAAA+AGG + chr1_2:16742316-16742335 None:intergenic 35.0%
!! CCTTTTCTGAGAAGTTTCAA+AGG - chr1_2:16742313-16742332 Msa0059570:CDS 35.0%
!!! CTCGAAATTTTGGTTCGAAA+AGG - chr1_2:16742412-16742431 Msa0059570:intron 35.0%
! TGTCTTGTTATGCGTTATTG+CGG - chr1_2:16742485-16742504 Msa0059570:intron 35.0%
AGAGAAAGTTCTCAGAAAAG+TGG + chr1_2:16742598-16742617 None:intergenic 35.0%
TACGAAACTGGAAAATCATG+TGG + chr1_2:16742638-16742657 None:intergenic 35.0%
! ATGATTTTCCAGTTTCGTAC+TGG - chr1_2:16742639-16742658 Msa0059570:CDS 35.0%
!!! GTGTTTTGATCGATGATTCT+TGG - chr1_2:16742697-16742716 Msa0059570:CDS 35.0%
ATTCTTGGGTAATTGCTAAG+AGG - chr1_2:16742712-16742731 Msa0059570:CDS 35.0%
! ATTTAAAGCCGCTCATCTTT+GGG + chr1_2:16742920-16742939 None:intergenic 35.0%
GTAATAAACGAGGCACATAT+TGG + chr1_2:16742983-16743002 None:intergenic 35.0%
GGAATTATCCGTAATAAACG+AGG + chr1_2:16742993-16743012 None:intergenic 35.0%
CCACCAGCACAAAATTAAAA+AGG + chr1_2:16743256-16743275 None:intergenic 35.0%
!!! CCTTTTTAATTTTGTGCTGG+TGG - chr1_2:16743253-16743272 Msa0059570:intron 35.0%
ATCAGACAAAATGAACTTGC+TGG + chr1_2:16743289-16743308 None:intergenic 35.0%
TGGATTATGTTAGAAGAGAG+CGG + chr1_2:16743356-16743375 None:intergenic 35.0%
AAGTCTGAAGAATTCCTAGT+TGG - chr1_2:16743812-16743831 Msa0059570:CDS 35.0%
TTCTTGCAAGTTGTTCTCAT+AGG - chr1_2:16743875-16743894 Msa0059570:CDS 35.0%
GAGTAGAGACATAATCTGAT+AGG - chr1_2:16743934-16743953 Msa0059570:intron 35.0%
GGATCTGCCATAACTTAATA+TGG + chr1_2:16743967-16743986 None:intergenic 35.0%
AAGTGTGACAAACCATGAAA+AGG + chr1_2:16743988-16744007 None:intergenic 35.0%
TTAGGTGATGAAACACGAAT+AGG + chr1_2:16744062-16744081 None:intergenic 35.0%
AGAATTTGATCATACTCTGC+AGG + chr1_2:16744339-16744358 None:intergenic 35.0%
ATTGTCTAATCGAAATGCAG+AGG + chr1_2:16744372-16744391 None:intergenic 35.0%
! GAAGCATATCAACTTGTTCA+TGG - chr1_2:16744429-16744448 Msa0059570:intron 35.0%
TGTTTGTGTTCATGCTTCAA+AGG - chr1_2:16744536-16744555 Msa0059570:intron 35.0%
CAAATAACTTAGCACTCAGA+AGG + chr1_2:16744714-16744733 None:intergenic 35.0%
CAGATATGTATTGCAATCCT+CGG - chr1_2:16744835-16744854 Msa0059570:intron 35.0%
AGATATGTATTGCAATCCTC+GGG - chr1_2:16744836-16744855 Msa0059570:intron 35.0%
!! AAACAGGAGAAGAGTTTTGA+GGG + chr1_2:16744990-16745009 None:intergenic 35.0%
! AAAACAGGAGAAGAGTTTTG+AGG + chr1_2:16744991-16745010 None:intergenic 35.0%
! CAAAACTCTTCTCCTGTTTT+TGG - chr1_2:16744991-16745010 Msa0059570:intron 35.0%
! AAAAATCAGTACTTGTTGCG+AGG + chr1_2:16745195-16745214 None:intergenic 35.0%
!!! TCGCAACAAGTACTGATTTT+TGG - chr1_2:16745194-16745213 Msa0059570:intron 35.0%
!!! CGCAACAAGTACTGATTTTT+GGG - chr1_2:16745195-16745214 Msa0059570:intron 35.0%
AAATAACACCAAACCAGCTA+TGG + chr1_2:16745245-16745264 None:intergenic 35.0%
ATTCCTCATTGGAAATATGC+AGG - chr1_2:16745267-16745286 Msa0059570:intron 35.0%
ATACCTGCATATTTCCAATG+AGG + chr1_2:16745273-16745292 None:intergenic 35.0%
! AAACAAGGCCTGAAATTTTG+GGG + chr1_2:16745480-16745499 None:intergenic 35.0%
! CAAACAAGGCCTGAAATTTT+GGG + chr1_2:16745481-16745500 None:intergenic 35.0%
! TCAAACAAGGCCTGAAATTT+TGG + chr1_2:16745482-16745501 None:intergenic 35.0%
!! ATCATAGCTGATGGACTTAA+TGG + chr1_2:16745996-16746015 None:intergenic 35.0%
ATTAAGTCCATCAGCTATGA+TGG - chr1_2:16745995-16746014 Msa0059570:CDS 35.0%
!!! GGGACATTTTTTTATCAGGA+TGG - chr1_2:16746144-16746163 Msa0059570:CDS 35.0%
! TTTTTATCAGGATGGAAGGA+AGG - chr1_2:16746152-16746171 Msa0059570:CDS 35.0%
! ACCTGTGTTGTGCTTTTATT+AGG - chr1_2:16746244-16746263 Msa0059570:intron 35.0%
! ACCTAATAAAAGCACAACAC+AGG + chr1_2:16746248-16746267 None:intergenic 35.0%
ATTGTCTTCATTTACACCTC+TGG + chr1_2:16746462-16746481 None:intergenic 35.0%
! ATGTCCCTTCGTAAATCTTT+TGG + chr1_2:16746500-16746519 None:intergenic 35.0%
!! TTTGCTTGGATTTGTTGATG+AGG - chr1_2:16746531-16746550 Msa0059570:CDS 35.0%
!! TTGCTTGGATTTGTTGATGA+GGG - chr1_2:16746532-16746551 Msa0059570:CDS 35.0%
! TCGTCCATTTTCTCAAACAT+TGG + chr1_2:16746760-16746779 None:intergenic 35.0%
! GAAAATGGACGAACAACTTT+TGG - chr1_2:16746768-16746787 Msa0059570:CDS 35.0%
!! TGTAAAGCACTGGTTTAAGA+CGG + chr1_2:16746807-16746826 None:intergenic 35.0%
!! TATGAAGAGCATCTCATCAA+CGG + chr1_2:16746863-16746882 None:intergenic 35.0%
! CATGTTTTATACAAGCTGCA+TGG - chr1_2:16747181-16747200 Msa0059570:intron 35.0%
! AAACCTAGAAGCATATATGG+TGG + chr1_2:16747310-16747329 None:intergenic 35.0%
! AGCAAACCTAGAAGCATATA+TGG + chr1_2:16747313-16747332 None:intergenic 35.0%
TCAGTAAAGTTAGGTTCTTC+AGG + chr1_2:16747423-16747442 None:intergenic 35.0%
ATATGGCGTCCATATAAGAA+AGG - chr1_2:16747530-16747549 Msa0059570:five_prime_UTR 35.0%
GCATGTTCACCTTTCTTATA+TGG + chr1_2:16747542-16747561 None:intergenic 35.0%
TAAGAAAGGTGAACATGCAA+TGG - chr1_2:16747544-16747563 Msa0059570:five_prime_UTR 35.0%
AATGGCATTTCGCTAGAATA+TGG - chr1_2:16747562-16747581 Msa0059570:five_prime_UTR 35.0%
CTAGAATATGGTGTCCATAT+AGG - chr1_2:16747574-16747593 Msa0059570:five_prime_UTR 35.0%
ATATGGTGTCCATATAGGAA+AGG - chr1_2:16747579-16747598 Msa0059570:five_prime_UTR 35.0%
!!! TCAATGTCGCTTTTCGTTTC+AGG - chr1_2:16741644-16741663 Msa0059570:CDS 40.0%
! TTCAAAGCACTTTGATGTGG+AGG + chr1_2:16741898-16741917 None:intergenic 40.0%
TTTCAAAGGGGACTTGAATC+TGG - chr1_2:16742327-16742346 Msa0059570:intron 40.0%
! GAGCATTGTCATAGTGATGA+TGG + chr1_2:16742389-16742408 None:intergenic 40.0%
!! CTTGTTCCACTTTTGAAGGA+AGG + chr1_2:16742460-16742479 None:intergenic 40.0%
ATGCGTTATTGCGGTATCAT+TGG - chr1_2:16742494-16742513 Msa0059570:intron 40.0%
CAATGAATCCAGTACGAAAC+TGG + chr1_2:16742650-16742669 None:intergenic 40.0%
CTTCCAAATACTCGAGAAGA+AGG + chr1_2:16742675-16742694 None:intergenic 40.0%
TCTTCTCGAGTATTTGGAAG+AGG - chr1_2:16742675-16742694 Msa0059570:CDS 40.0%
! TATTAAAGGGGCATACCTGT+GGG + chr1_2:16742785-16742804 None:intergenic 40.0%
! ATATTAAAGGGGCATACCTG+TGG + chr1_2:16742786-16742805 None:intergenic 40.0%
GTTATCATCCCAAAGATGAG+CGG - chr1_2:16742909-16742928 Msa0059570:intron 40.0%
! GATTTAAAGCCGCTCATCTT+TGG + chr1_2:16742921-16742940 None:intergenic 40.0%
CATTCTCACTGAAACAGCTT+GGG - chr1_2:16743043-16743062 Msa0059570:intron 40.0%
!! CATTCTATTTCTGGGTTCAC+AGG - chr1_2:16743201-16743220 Msa0059570:intron 40.0%
GGATTATGTTAGAAGAGAGC+GGG + chr1_2:16743355-16743374 None:intergenic 40.0%
AGGTAGTAGGGAATTTGCAT+CGG + chr1_2:16743382-16743401 None:intergenic 40.0%
GCGAAAAACTTATGGCTCAT+GGG + chr1_2:16743412-16743431 None:intergenic 40.0%
AGGGAAAGGCGAAAAACTTA+TGG + chr1_2:16743420-16743439 None:intergenic 40.0%
TTGTGTGAGGATAAAGGGAA+AGG + chr1_2:16743434-16743453 None:intergenic 40.0%
TGAAGAATTCCTAGTTGGCT+TGG - chr1_2:16743817-16743836 Msa0059570:CDS 40.0%
! GAAGAATTCCTAGTTGGCTT+GGG - chr1_2:16743818-16743837 Msa0059570:CDS 40.0%
TCAGATTATGTCTCTACTCC+AGG + chr1_2:16743933-16743952 None:intergenic 40.0%
! GTTATGGCAGATCCTTTTCA+TGG - chr1_2:16743973-16743992 Msa0059570:intron 40.0%
TCATTCTTGAAGTGATGCTG+TGG - chr1_2:16744509-16744528 Msa0059570:intron 40.0%
AGAAATGCAACATCGATGTG+CGG + chr1_2:16744639-16744658 None:intergenic 40.0%
ACTTAGCACTCAGAAGGATA+TGG + chr1_2:16744708-16744727 None:intergenic 40.0%
GATATGTATTGCAATCCTCG+GGG - chr1_2:16744837-16744856 Msa0059570:intron 40.0%
GAATGATTCTTGCCCAATAC+AGG - chr1_2:16744887-16744906 Msa0059570:intron 40.0%
!!! AACTCTTCTCCTGTTTTTGG+TGG - chr1_2:16744994-16745013 Msa0059570:intron 40.0%
!!! ACTCTTCTCCTGTTTTTGGT+GGG - chr1_2:16744995-16745014 Msa0059570:intron 40.0%
GGTGGGGCCTAAAAAATTTA+AGG - chr1_2:16745012-16745031 Msa0059570:intron 40.0%
! GCAATTTTCATTGCCATAGC+TGG - chr1_2:16745229-16745248 Msa0059570:intron 40.0%
TTTCATTGCCATAGCTGGTT+TGG - chr1_2:16745234-16745253 Msa0059570:intron 40.0%
ACAAAAGGTAAAATGGGCAC+CGG + chr1_2:16745378-16745397 None:intergenic 40.0%
!! GGCCTTGTTTGATTGTGATT+TGG - chr1_2:16745490-16745509 Msa0059570:intron 40.0%
AGAAACACCATCATAGCTGA+TGG + chr1_2:16746005-16746024 None:intergenic 40.0%
GCAGTCAACACAAACAAGAT+TGG - chr1_2:16746325-16746344 Msa0059570:CDS 40.0%
GTCAACACAAACAAGATTGG+AGG - chr1_2:16746328-16746347 Msa0059570:CDS 40.0%
TGGAGGAGATGAGAGTAAAA+AGG - chr1_2:16746345-16746364 Msa0059570:CDS 40.0%
AGGAGATGAGAGTAAAAAGG+AGG - chr1_2:16746348-16746367 Msa0059570:CDS 40.0%
GGAGATGAGAGTAAAAAGGA+GGG - chr1_2:16746349-16746368 Msa0059570:CDS 40.0%
TACAAATGGCAAGAAACCAG+AGG - chr1_2:16746443-16746462 Msa0059570:CDS 40.0%
CATTAAGCGTCATCTTTGCT+TGG - chr1_2:16746517-16746536 Msa0059570:CDS 40.0%
CGCTGTTGTGTATGAACTTT+AGG - chr1_2:16746732-16746751 Msa0059570:CDS 40.0%
GGTGCCAATGTTTGAGAAAA+TGG - chr1_2:16746753-16746772 Msa0059570:CDS 40.0%
CTTTGTTCTGTGTAAAGCAC+TGG + chr1_2:16746817-16746836 None:intergenic 40.0%
CAAAGTTATGTTGTCCGAGA+AGG - chr1_2:16746832-16746851 Msa0059570:CDS 40.0%
!! ATGAAGAGCATCTCATCAAC+GGG + chr1_2:16746862-16746881 None:intergenic 40.0%
TTGACCATAACAACTAACGG+TGG - chr1_2:16746898-16746917 Msa0059570:intron 40.0%
TGACCATAACAACTAACGGT+GGG - chr1_2:16746899-16746918 Msa0059570:intron 40.0%
GTACTCAGAATTGAAGAAGC+CGG + chr1_2:16746929-16746948 None:intergenic 40.0%
! GTTTTATACAAGCTGCATGG+AGG - chr1_2:16747184-16747203 Msa0059570:intron 40.0%
TGAAGAGTCTCTTGTTGAAG+AGG - chr1_2:16747227-16747246 Msa0059570:intron 40.0%
! AAAGATGCATTGGCAAAGAC+TGG - chr1_2:16747261-16747280 Msa0059570:intron 40.0%
GGTGGTAACACAACAAGTTT+AGG - chr1_2:16747282-16747301 Msa0059570:intron 40.0%
AGGAGTGGTAACTGAAAGAG+TGG + chr1_2:16741878-16741897 None:intergenic 45.0%
! TGTCGGTGCTTGACATGTAT+TGG + chr1_2:16742129-16742148 None:intergenic 45.0%
!! GACTTGAATCTGGTTCTGAG+AGG - chr1_2:16742337-16742356 Msa0059570:intron 45.0%
!! CTGGTTCTGAGAGGATAAAG+AGG - chr1_2:16742346-16742365 Msa0059570:intron 45.0%
!!! TTTTGAAGGAAGGTACCCTG+CGG + chr1_2:16742450-16742469 None:intergenic 45.0%
! AGGGTACCTTCCTTCAAAAG+TGG - chr1_2:16742451-16742470 Msa0059570:intron 45.0%
AAATGCCTTTCACTGGACAG+AGG - chr1_2:16742558-16742577 Msa0059570:CDS 45.0%
AATGCCTTTCACTGGACAGA+GGG - chr1_2:16742559-16742578 Msa0059570:CDS 45.0%
GCTCCTTCTTCTCGAGTATT+TGG - chr1_2:16742669-16742688 Msa0059570:CDS 45.0%
GCATTCTCACTGAAACAGCT+TGG - chr1_2:16743042-16743061 Msa0059570:intron 45.0%
GGTAGTAGGGAATTTGCATC+GGG + chr1_2:16743381-16743400 None:intergenic 45.0%
AAACTTATGGCTCATGGGTG+AGG + chr1_2:16743407-16743426 None:intergenic 45.0%
GGCGAAAAACTTATGGCTCA+TGG + chr1_2:16743413-16743432 None:intergenic 45.0%
CTACTAAACCCAAGCCAACT+AGG + chr1_2:16743829-16743848 None:intergenic 45.0%
TACCCATGTTTCAAACCCCT+TGG - chr1_2:16744228-16744247 Msa0059570:CDS 45.0%
ACCCATGTTTCAAACCCCTT+GGG - chr1_2:16744229-16744248 Msa0059570:CDS 45.0%
TTGATCATACTCTGCAGGCA+TGG + chr1_2:16744334-16744353 None:intergenic 45.0%
!!! TTTAGGTCCTTGGTGCCTTT+TGG - chr1_2:16744739-16744758 Msa0059570:intron 45.0%
!! ACAAGTACCAAAAGGCACCA+AGG + chr1_2:16744749-16744768 None:intergenic 45.0%
GCATGTGGTTTCTCGTTCTA+TGG + chr1_2:16744775-16744794 None:intergenic 45.0%
TAGAACGAGAAACCACATGC+TGG - chr1_2:16744775-16744794 Msa0059570:intron 45.0%
ATAGACTTAAAACCTCCCCG+AGG + chr1_2:16744855-16744874 None:intergenic 45.0%
TGATTCTTGCCCAATACAGG+AGG - chr1_2:16744890-16744909 Msa0059570:intron 45.0%
TTCCTTGATGCCCTTCAATC+CGG - chr1_2:16744942-16744961 Msa0059570:intron 45.0%
!!! CTCTTCTCCTGTTTTTGGTG+GGG - chr1_2:16744996-16745015 Msa0059570:intron 45.0%
! TTTTAGGCCCCACCAAAAAC+AGG + chr1_2:16745006-16745025 None:intergenic 45.0%
ATCCTTTATCGCAGCTCTCT+TGG - chr1_2:16745163-16745182 Msa0059570:intron 45.0%
GGCGGTATGATCAGTACAAA+TGG - chr1_2:16746429-16746448 Msa0059570:CDS 45.0%
GAGATGCTCTTCATAATGCG+AGG - chr1_2:16746868-16746887 Msa0059570:intron 45.0%
GTATGAGGTACGAGGATCTA+AGG + chr1_2:16746995-16747014 None:intergenic 45.0%
GGATATGGGAAGGTTGTATG+AGG + chr1_2:16747010-16747029 None:intergenic 45.0%
ACAACCTTCCCATATCCACT+AGG - chr1_2:16747013-16747032 Msa0059570:intron 45.0%
! CTGACTGTCCTAGTGGATAT+GGG + chr1_2:16747024-16747043 None:intergenic 45.0%
! TCTGACTGTCCTAGTGGATA+TGG + chr1_2:16747025-16747044 None:intergenic 45.0%
GATTGTTCTGACTGTCCTAG+TGG + chr1_2:16747031-16747050 None:intergenic 45.0%
AGTTTGTGGCGTCTCAATTC+CGG - chr1_2:16747091-16747110 Msa0059570:intron 45.0%
GCGAGTAGAATCTGAAAGTG+TGG + chr1_2:16747140-16747159 None:intergenic 45.0%
TCAGATTCTACTCGCAACAC+TGG - chr1_2:16747145-16747164 Msa0059570:intron 45.0%
CTCTTGTTGAAGAGGAGAAC+AGG - chr1_2:16747235-16747254 Msa0059570:intron 45.0%
GAACAGGCTGAAAGATGCAT+TGG - chr1_2:16747251-16747270 Msa0059570:intron 45.0%
GTGCCACCATATATGCTTCT+AGG - chr1_2:16747304-16747323 Msa0059570:intron 45.0%
TCGCAACAATCTGAGTGCAT+TGG + chr1_2:16747337-16747356 None:intergenic 45.0%
!! GGCTTCTGAAGCAATATAGC+AGG + chr1_2:16747402-16747421 None:intergenic 45.0%
GCACGTTCACCTTTCCTATA+TGG + chr1_2:16747591-16747610 None:intergenic 45.0%
AGCACTTTGATGTGGAGGAG+TGG + chr1_2:16741893-16741912 None:intergenic 50.0%
AAGGAAAATCCTCGATCCGC+AGG - chr1_2:16742431-16742450 Msa0059570:intron 50.0%
AGGAAAATCCTCGATCCGCA+GGG - chr1_2:16742432-16742451 Msa0059570:intron 50.0%
TCTCACTGAAACAGCTTGGG+CGG - chr1_2:16743046-16743065 Msa0059570:intron 50.0%
TAGGGAATTTGCATCGGGAG+TGG + chr1_2:16743376-16743395 None:intergenic 50.0%
! GCCCAAGGGGTTTGAAACAT+GGG + chr1_2:16744233-16744252 None:intergenic 50.0%
! AGCCCAAGGGGTTTGAAACA+TGG + chr1_2:16744234-16744253 None:intergenic 50.0%
ATGTATTGCAATCCTCGGGG+AGG - chr1_2:16744840-16744859 Msa0059570:intron 50.0%
CTCCACAACACCGGATTGAA+GGG + chr1_2:16744955-16744974 None:intergenic 50.0%
ACTCCACAACACCGGATTGA+AGG + chr1_2:16744956-16744975 None:intergenic 50.0%
ATCTCTCGACTCCACAACAC+CGG + chr1_2:16744964-16744983 None:intergenic 50.0%
GACCAAGAGAGCTGCGATAA+AGG + chr1_2:16745168-16745187 None:intergenic 50.0%
TCAGGATGGAAGGAAGGAGA+AGG - chr1_2:16746158-16746177 Msa0059570:CDS 50.0%
AAAGGAGGGATGCAGAACAG+TGG - chr1_2:16746363-16746382 Msa0059570:CDS 50.0%
!! ATTCGCTCTCTAAGGTCGTC+AGG + chr1_2:16746407-16746426 None:intergenic 50.0%
ACGACCTTAGAGAGCGAATC+AGG - chr1_2:16746408-16746427 Msa0059570:CDS 50.0%
ACCTTAGAGAGCGAATCAGG+CGG - chr1_2:16746411-16746430 Msa0059570:CDS 50.0%
CATCAACGGGATCTCCTTCT+CGG + chr1_2:16746849-16746868 None:intergenic 50.0%
TCGCCCACCGTTAGTTGTTA+TGG + chr1_2:16746905-16746924 None:intergenic 50.0%
TTAAAAGCCGGCGACTTCTG+TGG - chr1_2:16746949-16746968 Msa0059570:intron 50.0%
TGGAGAGGAGCTTCTCACAT+GGG - chr1_2:16746969-16746988 Msa0059570:intron 50.0%
GGAAGGTTGTATGAGGTACG+AGG + chr1_2:16747003-16747022 None:intergenic 50.0%
! CTGTCCTAGTGGATATGGGA+AGG + chr1_2:16747020-16747039 None:intergenic 50.0%
!!! ATCGTCGGCTTTTAGCGCAA+AGG + chr1_2:16747067-16747086 None:intergenic 50.0%
! AGCCGACGATCTGAAGTTTG+TGG - chr1_2:16747077-16747096 Msa0059570:intron 50.0%
CGCCACAAACTTCAGATCGT+CGG + chr1_2:16747082-16747101 None:intergenic 50.0%
! GATGCATTGGCAAAGACTGG+TGG - chr1_2:16747264-16747283 Msa0059570:intron 50.0%
CTCAGATTGTTGCGACGAAG+TGG - chr1_2:16747342-16747361 Msa0059570:intron 50.0%
GGTTAGGCCGTCTTGTGTAG+AGG - chr1_2:16741977-16741996 Msa0059570:CDS 55.0%
CCATCCCTCTGTCCAGTGAA+AGG + chr1_2:16742566-16742585 None:intergenic 55.0%
CCTTTCACTGGACAGAGGGA+TGG - chr1_2:16742563-16742582 Msa0059570:CDS 55.0%
TGCGATTCTTCCACTCCCAC+AGG - chr1_2:16742767-16742786 Msa0059570:intron 55.0%
CTCACTGAAACAGCTTGGGC+GGG - chr1_2:16743047-16743066 Msa0059570:intron 55.0%
ATGGGTGAGGCGAGGTAGTA+GGG + chr1_2:16743394-16743413 None:intergenic 55.0%
CCTTCACGAAAGAGCCCAAG+GGG + chr1_2:16744246-16744265 None:intergenic 55.0%
CCCTTCACGAAAGAGCCCAA+GGG + chr1_2:16744247-16744266 None:intergenic 55.0%
CCCTTGGGCTCTTTCGTGAA+GGG - chr1_2:16744244-16744263 Msa0059570:CDS 55.0%
TCCCTTCACGAAAGAGCCCA+AGG + chr1_2:16744248-16744267 None:intergenic 55.0%
ACACGCTTCTTGCCAGCATG+TGG + chr1_2:16744790-16744809 None:intergenic 55.0%
!! CACCGGATTGAAGGGCATCA+AGG + chr1_2:16744947-16744966 None:intergenic 55.0%
! TGCCCTTCAATCCGGTGTTG+TGG - chr1_2:16744950-16744969 Msa0059570:intron 55.0%
! ACCGCCTGATTCGCTCTCTA+AGG + chr1_2:16746415-16746434 None:intergenic 55.0%
ACAACTAACGGTGGGCGAAC+CGG - chr1_2:16746907-16746926 Msa0059570:intron 55.0%
GTGGAGAGGAGCTTCTCACA+TGG - chr1_2:16746968-16746987 Msa0059570:intron 55.0%
!! GGCGAAGCTGCTTGCTATGA+AGG + chr1_2:16747119-16747138 None:intergenic 55.0%
TGGCACCGCAAGGAAGACAA+GGG - chr1_2:16747362-16747381 Msa0059570:exon 55.0%
TAGCGCCCTTGTCTTCCTTG+CGG + chr1_2:16747370-16747389 None:intergenic 55.0%
! AAGGGGCATACCTGTGGGAG+TGG + chr1_2:16742780-16742799 None:intergenic 60.0%
CATGGGTGAGGCGAGGTAGT+AGG + chr1_2:16743395-16743414 None:intergenic 60.0%
TATGGCTCATGGGTGAGGCG+AGG + chr1_2:16743402-16743421 None:intergenic 60.0%
CCCCTTGGGCTCTTTCGTGA+AGG - chr1_2:16744243-16744262 Msa0059570:CDS 60.0%
CTCCTCTCCACAGAAGTCGC+CGG + chr1_2:16746959-16746978 None:intergenic 60.0%
!! GCTGCTTGCTATGAAGGCGC+CGG + chr1_2:16747113-16747132 None:intergenic 60.0%
ACTCGCAACACTGGCGCACA+TGG - chr1_2:16747154-16747173 Msa0059570:intron 60.0%
CTCGCAACACTGGCGCACAT+GGG - chr1_2:16747155-16747174 Msa0059570:intron 60.0%
GTGGCACCGCAAGGAAGACA+AGG - chr1_2:16747361-16747380 Msa0059570:CDS 60.0%
!! GGAAGGTACCCTGCGGATCG+AGG + chr1_2:16742443-16742462 None:intergenic 65.0%
AGCCGGCGACTTCTGTGGAG+AGG - chr1_2:16746954-16746973 Msa0059570:intron 65.0%
TGCGACGAAGTGGCACCGCA+AGG - chr1_2:16747352-16747371 Msa0059570:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 16741435 16747661 16741435 ID=Msa0059570;Name=Msa0059570
chr1_2 mRNA 16741435 16747661 16741435 ID=Msa0059570-mRNA-1;Parent=Msa0059570;Name=Msa0059570-mRNA-1;_AED=0.07;_eAED=0.07;_QI=281|1|1|1|1|1|7|206|716
chr1_2 exon 16741435 16742342 16741435 ID=Msa0059570-mRNA-1:exon:6609;Parent=Msa0059570-mRNA-1
chr1_2 exon 16742543 16742779 16742543 ID=Msa0059570-mRNA-1:exon:6608;Parent=Msa0059570-mRNA-1
chr1_2 exon 16743808 16743919 16743808 ID=Msa0059570-mRNA-1:exon:6607;Parent=Msa0059570-mRNA-1
chr1_2 exon 16744063 16744352 16744063 ID=Msa0059570-mRNA-1:exon:6606;Parent=Msa0059570-mRNA-1
chr1_2 exon 16745987 16746199 16745987 ID=Msa0059570-mRNA-1:exon:6605;Parent=Msa0059570-mRNA-1
chr1_2 exon 16746308 16746872 16746308 ID=Msa0059570-mRNA-1:exon:6604;Parent=Msa0059570-mRNA-1
chr1_2 exon 16747349 16747661 16747349 ID=Msa0059570-mRNA-1:exon:6603;Parent=Msa0059570-mRNA-1
chr1_2 five_prime_UTR 16747381 16747661 16747381 ID=Msa0059570-mRNA-1:five_prime_utr;Parent=Msa0059570-mRNA-1
chr1_2 CDS 16747349 16747380 16747349 ID=Msa0059570-mRNA-1:cds;Parent=Msa0059570-mRNA-1
chr1_2 CDS 16746308 16746872 16746308 ID=Msa0059570-mRNA-1:cds;Parent=Msa0059570-mRNA-1
chr1_2 CDS 16745987 16746199 16745987 ID=Msa0059570-mRNA-1:cds;Parent=Msa0059570-mRNA-1
chr1_2 CDS 16744063 16744352 16744063 ID=Msa0059570-mRNA-1:cds;Parent=Msa0059570-mRNA-1
chr1_2 CDS 16743808 16743919 16743808 ID=Msa0059570-mRNA-1:cds;Parent=Msa0059570-mRNA-1
chr1_2 CDS 16742543 16742779 16742543 ID=Msa0059570-mRNA-1:cds;Parent=Msa0059570-mRNA-1
chr1_2 CDS 16741641 16742342 16741641 ID=Msa0059570-mRNA-1:cds;Parent=Msa0059570-mRNA-1
chr1_2 three_prime_UTR 16741435 16741640 16741435 ID=Msa0059570-mRNA-1:three_prime_utr;Parent=Msa0059570-mRNA-1
Gene Sequence

>Msa0059570

ATGAGTACCTTTCAGCAAGAGAAGTTTGTTAGGTTTCAGGATTCTAATTCTGAGGTTTCTAAGAGAAATTATCCTGCATTTAAGATAACACAGTCGGGGAGATTTAGAAGTACAATAAGTTCCTTTTCTGAGAAGTTTCAAAGGGGACTTGAATCTGGTTCTGAGAGGATAAAGAGGTTCAAAACATCATTCGACCATCATCACTATGACAATGCTCTTTCTCGAAATTTTGGTTCGAAAAGGAAAATCCTCGATCCGCAGGGTACCTTCCTTCAAAAGTGGAACAAGATATTTGTCTTGTTATGCGTTATTGCGGTATCATTGGATCCTTTGTTCTTTTATGTTCCTGTGATTGATGGTGAAAATAAATGCCTTTCACTGGACAGAGGGATGGAGATTACAGCCACTTTTCTGAGAACTTTCTCTGATGTTTTTTATATAATCCACATGATTTTCCAGTTTCGTACTGGATTCATTGCTCCTTCTTCTCGAGTATTTGGAAGAGGTGTTTTGATCGATGATTCTTGGGTAATTGCTAAGAGGTATCTGTCATCATATTTCTTAGTTGACATTCTTGCGATTCTTCCACTCCCACAGGTGGTGATTCTAGTTATCATCCCAAAGATGAGCGGCTTTAAATCACTCAATACAAAGAACTTGCTGAAAGTTATTGTTGTCTTCCAATATGTGCCTCGTTTATTACGGATAATTCCATTATATAAAGAAGTTACAAGAACATCTGGCATTCTCACTGAAACAGCTTGGGCGGGAGCTGCATTCAATCTGTTACTTTACATGCTTGCAAGTCATGTCCTTGGTGCCTTTTGGTACTTGTTTTCCATAGAACGAGAAACCACATGCTGGCAAGAAGCGTGTCGAAGTAATAACATGTGTAACACGGCAGATATGTATTGCAATCCTCGGGGAGGTTTTAAGTCTATTGCGAAATTCTTGAATGATTCTTGCCCAATACAGGAGGAAGATAAAAAACTATTTGATTTTGGAATTTTCCTTGATGCCCTTCAATCCGGTGTTGTGGAGTCGAGAGATTTTCCCTCAAAACTCTTCTCCTGTTTTTGGTGGGGCCTAAAAAATTTAAGCTCTCTTGGTCAGAACCTCGCAACAAGTACTGATTTTTGGGAAATCTGTTTTGCAATTTTCATTGCCATAGCTGGTTTGGTGTTATTTTCATTCCTCATTGGAAATATGCAGACATATTTGCAGTCAACACAAACAAGATTGGAGGAGATGAGAGTAAAAAGGAGGGATGCAGAACAGTGGATGTCTCATCGATTGCTTCCTGACGACCTTAGAGAGCGAATCAGGCGGTATGATCAGTACAAATGGCAAGAAACCAGAGGTGTAAATGAAGACAATTTAGTTCGTGATCTTCCAAAAGATTTACGAAGGGACATTAAGCGTCATCTTTGCTTGGATTTGTTGATGAGGGTGCCAATGTTTGAGAAAATGGACGAACAACTTTTGGATGCAATGTGTGACCGTCTTAAACCAGTGCTTTACACAGAACAAAGTTATGTTGTCCGAGAAGGAGATCCCGTTGATGAGATGCTCTTCATAATGCGAGGCAAGCTATTGACCATAACAACTAACGGTGGGCGAACCGGCTTCTTCAATTCTGAGTACTTAAAAGCCGGCGACTTCTGTGGAGAGGAGCTTCTCACATGGGCCTTAGATCCTCGTACCTCATACAACCTTCCCATATCCACTAGGACAGTCAGAACAATCGTAGAAGTTGAAGCCTTTGCGCTAAAAGCCGACGATCTGAAGTTTGTGGCGTCTCAATTCCGGCGCCTTCATAGCAAGCAGCTTCGCCACACTTTCAGATTCTACTCGCAACACTGGCGCACATGGGCTGCATGTTTTATACAAGCTGCATGGAGGCGCTACAGCAAGAAGAAACTTGAAGAGTCTCTTGTTGAAGAGGAGAACAGGCTGAAAGATGCATTGGCAAAGACTGGTGGTAACACAACAAGTTTAGGTGCCACCATATATGCTTCTAGGTTTGCTGCCAATGCACTCAGATTGTTGCGACGAAGTGGCACCGCAAGGAAGACAAGGGCGCTAGAGAGAATGCCTGCTATATTGCTTCAGAAGCCTGAAGAACCTAACTTTACTGATGATGAACAATAG
Protein sequence

>Msa0059570

MSTFQQEKFVRFQDSNSEVSKRNYPAFKITQSGRFRSTISSFSEKFQRGLESGSERIKRFKTSFDHHHYDNALSRNFGSKRKILDPQGTFLQKWNKIFVLLCVIAVSLDPLFFYVPVIDGENKCLSLDRGMEITATFLRTFSDVFYIIHMIFQFRTGFIAPSSRVFGRGVLIDDSWVIAKRYLSSYFLVDILAILPLPQVVILVIIPKMSGFKSLNTKNLLKVIVVFQYVPRLLRIIPLYKEVTRTSGILTETAWAGAAFNLLLYMLASHVLGAFWYLFSIERETTCWQEACRSNNMCNTADMYCNPRGGFKSIAKFLNDSCPIQEEDKKLFDFGIFLDALQSGVVESRDFPSKLFSCFWWGLKNLSSLGQNLATSTDFWEICFAIFIAIAGLVLFSFLIGNMQTYLQSTQTRLEEMRVKRRDAEQWMSHRLLPDDLRERIRRYDQYKWQETRGVNEDNLVRDLPKDLRRDIKRHLCLDLLMRVPMFEKMDEQLLDAMCDRLKPVLYTEQSYVVREGDPVDEMLFIMRGKLLTITTNGGRTGFFNSEYLKAGDFCGEELLTWALDPRTSYNLPISTRTVRTIVEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQHWRTWAACFIQAAWRRYSKKKLEESLVEEENRLKDALAKTGGNTTSLGATIYASRFAANALRLLRRSGTARKTRALERMPAILLQKPEEPNFTDDEQ*