AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1093570


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1093570 MtrunA17_Chr7g0226261 87.751 498 9 3 1 446 1 498 0.0 864
Msa1093570 MtrunA17_Chr1g0193851 28.310 491 270 14 15 441 75 547 1.96e-45 166
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1093570 AT5G14220.1 62.295 488 128 5 11 445 17 501 0.0 611
Msa1093570 AT5G14220.4 62.295 488 128 5 11 445 65 549 0.0 610
Msa1093570 AT5G14220.2 59.016 488 114 5 11 445 17 471 0.0 559
Msa1093570 AT5G14220.3 60.225 445 121 5 54 445 2 443 0.0 540
Msa1093570 AT5G14220.5 60.225 445 121 5 54 445 2 443 0.0 540
Msa1093570 AT4G01690.1 27.551 490 277 14 13 440 59 532 4.50e-39 148
Msa1093570 AT4G01690.2 27.214 463 282 12 13 440 59 501 2.25e-36 140

Find 109 sgRNAs with CRISPR-Local

Find 605 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATTCTGAAATGCAAAAT+TGG 0.148362 7_3:-13577589 Msa1093570:three_prime_UTR
TTTCCCAGAGCTATGGAATT+TGG 0.164490 7_3:-13582693 Msa1093570:CDS
GCTTTACAATCCAGCGTATT+TGG 0.185895 7_3:-13581935 Msa1093570:CDS
CTTAATAACCACCTTTAAAA+AGG 0.225514 7_3:-13579756 Msa1093570:CDS
AGATTCTTCGAACGCCATTT+TGG 0.225642 7_3:-13583728 Msa1093570:CDS
CATCTCTATACCACCTTCAT+AGG 0.233270 7_3:-13579511 Msa1093570:CDS
ACAATTGCAGCCATTTCTTC+TGG 0.259910 7_3:-13579040 Msa1093570:intron
GAAAATGAAATAGAGGTTAA+AGG 0.282471 7_3:-13585196 Msa1093570:CDS
AGTAAAGGCTTTCCTTTATA+TGG 0.287943 7_3:-13579017 Msa1093570:intron
TTGTAAAGCCCCTGCTATAA+TGG 0.295256 7_3:+13581949 None:intergenic
AAGAGACCACTGGAGGGTTT+TGG 0.296122 7_3:-13579725 Msa1093570:CDS
TTTCTCGAGATGGGCTAGTC+TGG 0.296131 7_3:-13585971 Msa1093570:CDS
AAACTCACAGAAAGAGATTC+AGG 0.299826 7_3:+13582849 None:intergenic
CCTTCAAAAGAGCAACAAAA+TGG 0.315816 7_3:-13579692 Msa1093570:CDS
TTCAAATTCAAAATGGAGTT+GGG 0.319026 7_3:+13577655 None:intergenic
CATATACCTCTTTCCCAAAA+TGG 0.334289 7_3:+13583714 None:intergenic
TTCTCCAAATTCCATAGCTC+TGG 0.342861 7_3:+13582689 None:intergenic
GACTCAGCTTCCGTCCAGTA+TGG 0.366796 7_3:+13587387 None:intergenic
AGTAGTGCAGCAGGATTTGC+AGG 0.374983 7_3:+13584680 None:intergenic
GAAGTTCCCCATCGCAAAAC+TGG 0.378508 7_3:-13581602 Msa1093570:CDS
CTGTTGTTGGTGCTGGTGTA+AGG 0.394896 7_3:-13587150 Msa1093570:intron
AAAGCTGTTGGGAGCGGAGG+GGG 0.398693 7_3:-13579134 Msa1093570:CDS
TAAGACTGAGAGTGGTAAAT+AGG 0.402238 7_3:+13579775 None:intergenic
TTATTCTGAAATGCAAAATT+GGG 0.406966 7_3:-13577588 Msa1093570:three_prime_UTR
AGGTTTGGTTCCATTATAGC+AGG 0.412676 7_3:-13581959 Msa1093570:CDS
TTTCAAATTCAAAATGGAGT+TGG 0.426147 7_3:+13577654 None:intergenic
GTTAAAAGAGTTGCTGTTGT+TGG 0.430484 7_3:-13587163 Msa1093570:CDS
TGTTGTCTGAAGCATTGTTT+AGG 0.430646 7_3:+13577738 None:intergenic
AGCCTTTACTCCAGAAGAAA+TGG 0.436498 7_3:+13579030 None:intergenic
CCATAGTTATGACCATATAA+AGG 0.439671 7_3:+13579005 None:intergenic
AGCTATGGAATTTGGAGAAA+AGG 0.440643 7_3:-13582685 Msa1093570:intron
ATATCACTGGGTGCTCGATC+TGG 0.441880 7_3:+13579535 None:intergenic
AAAGGTTTGATTGATGCTCT+TGG 0.449228 7_3:-13585178 Msa1093570:CDS
CTAGCAAGACATACCAGAAC+TGG 0.452360 7_3:+13584834 None:intergenic
GTTGGAGGTACAAGTGCTGC+AGG 0.456983 7_3:-13582873 Msa1093570:CDS
GACGGAAGCTGAGTCAGAAA+TGG 0.459947 7_3:-13587379 Msa1093570:exon
ATCTCTATACCACCTTCATA+GGG 0.462355 7_3:-13579510 Msa1093570:CDS
AGCCATTTCTTCTGGAGTAA+AGG 0.466548 7_3:-13579032 Msa1093570:CDS
TTGCTCTTCAGTAGTGCAGC+AGG 0.472490 7_3:+13584671 None:intergenic
AGAGTTGCTGTTGTTGGTGC+TGG 0.474709 7_3:-13587157 Msa1093570:CDS
TTCTCGAGATGGGCTAGTCT+GGG 0.477873 7_3:-13585970 Msa1093570:CDS
AGAAAGCTGTTGGGAGCGGA+GGG 0.479152 7_3:-13579136 Msa1093570:CDS
ACTTCTTTCTGCACAATCAA+AGG 0.479775 7_3:-13584648 Msa1093570:intron
TCCATAGCTCTGGGAAAGAA+TGG 0.480104 7_3:+13582699 None:intergenic
GAAACCTTCGTACATCTAGA+TGG 0.481274 7_3:+13577697 None:intergenic
CCGCTCCCAACAGCTTTCTC+AGG 0.488618 7_3:+13579140 None:intergenic
TTCTGACCTGAGAAAGCTGT+TGG 0.492675 7_3:-13579146 Msa1093570:CDS
TCTCCAAATTCCATAGCTCT+GGG 0.495582 7_3:+13582690 None:intergenic
GTTGGTAGAGCAATTGCCTC+GGG 0.495658 7_3:-13577791 Msa1093570:CDS
GAGAAAGCTGTTGGGAGCGG+AGG 0.496482 7_3:-13579137 Msa1093570:CDS
GCAGACTGAAAATGAAATAG+AGG 0.497637 7_3:-13585203 Msa1093570:intron
CTAAGAACTGTTTCTCGAGA+TGG 0.497762 7_3:-13585981 Msa1093570:CDS
GCCATTCTTTCCCAGAGCTA+TGG 0.506378 7_3:-13582700 Msa1093570:CDS
GCGCGTAAGCTAAACCATAC+TGG 0.507595 7_3:-13587401 Msa1093570:five_prime_UTR
GGTATAGAGATGCATATCAC+TGG 0.515192 7_3:+13579522 None:intergenic
GACTATGAATCTCTGAGCAT+TGG 0.521447 7_3:-13587442 None:intergenic
TAAGAACTGTTTCTCGAGAT+GGG 0.524079 7_3:-13585980 Msa1093570:CDS
GCACTTGTACCTCCAACAAA+AGG 0.524762 7_3:+13582879 None:intergenic
ATGGCCTCCTCTGCAAAAGA+TGG 0.528542 7_3:-13587360 Msa1093570:intron
CCTGAGAAAGCTGTTGGGAG+CGG 0.532148 7_3:-13579140 Msa1093570:CDS
GGTTTGGTTCCATTATAGCA+GGG 0.532807 7_3:-13581958 Msa1093570:CDS
GATACATTGTGCAAAGAGCT+TGG 0.533819 7_3:-13581681 Msa1093570:CDS
TCTGACCTGAGAAAGCTGTT+GGG 0.538599 7_3:-13579145 Msa1093570:CDS
TTTGAAGCTGAAGGAAGAGC+TGG 0.544021 7_3:-13586011 Msa1093570:CDS
TGACATTAAATTAAATGCGA+AGG 0.544078 7_3:-13581652 Msa1093570:CDS
CAAATTCAAAATGGAGTTGG+GGG 0.549044 7_3:+13577657 None:intergenic
AACTCACAGAAAGAGATTCA+GGG 0.549159 7_3:+13582850 None:intergenic
TCAAATTCAAAATGGAGTTG+GGG 0.553956 7_3:+13577656 None:intergenic
AGTTGGTAGAGCAATTGCCT+CGG 0.554244 7_3:-13577792 Msa1093570:CDS
GTCTGAAGCATTGTTTAGGT+AGG 0.565659 7_3:+13577742 None:intergenic
CTGATGAAAATTCTGAAGAA+AGG 0.568613 7_3:-13583871 Msa1093570:intron
GGAGAATGTAAAGAGACCAC+TGG 0.579052 7_3:-13579735 Msa1093570:CDS
GTAACTGTATTTGAAGCTGA+AGG 0.584060 7_3:-13586020 Msa1093570:CDS
GTTTGGTTCCATTATAGCAG+GGG 0.587823 7_3:-13581957 Msa1093570:CDS
GTATGGTTTAGCTTACGCGC+GGG 0.591199 7_3:+13587404 None:intergenic
GTGGTTATTAAGACTGAGAG+TGG 0.592796 7_3:+13579767 None:intergenic
TAGCGCTTATGCTGTGACAA+TGG 0.594696 7_3:+13584876 None:intergenic
GAAGCTGAAGGAAGAGCTGG+AGG 0.597549 7_3:-13586008 Msa1093570:CDS
TATGGTTTAGCTTACGCGCG+GGG 0.601988 7_3:+13587405 None:intergenic
CACAGAGGTGGACTCTCAGT+TGG 0.604737 7_3:-13577809 Msa1093570:CDS
TGATTTCAGTTTGTAAGCCG+CGG 0.606440 7_3:+13586055 None:intergenic
GGTGTCAAGTGGGCTTGCCG+CGG 0.607822 7_3:-13586072 Msa1093570:intron
CTCTATACCACCTTCATAGG+GGG 0.610093 7_3:-13579508 Msa1093570:CDS
TGTTGATGCAGTAATTATGA+CGG 0.611035 7_3:-13581544 Msa1093570:intron
ATCAGCTGCTTTGCAACCCG+AGG 0.614148 7_3:+13577775 None:intergenic
GGACGAGGGAGCTAATACAA+TGG 0.615288 7_3:-13585949 Msa1093570:intron
GATGGGCTAGTCTGGGACGA+GGG 0.617395 7_3:-13585963 Msa1093570:CDS
TTTGTAGGTAACCACAGAGG+TGG 0.618153 7_3:-13577821 Msa1093570:intron
ATGACATACTTGACGAATGT+GGG 0.618696 7_3:+13579109 None:intergenic
GAAAGCTGTTGGGAGCGGAG+GGG 0.628779 7_3:-13579135 Msa1093570:CDS
AGATGGGCTAGTCTGGGACG+AGG 0.636611 7_3:-13585964 Msa1093570:CDS
CTGAAGGAAGAGCTGGAGGG+AGG 0.639182 7_3:-13586004 Msa1093570:CDS
GTATAGAGATGCATATCACT+GGG 0.643232 7_3:+13579523 None:intergenic
TCTCTATACCACCTTCATAG+GGG 0.648326 7_3:-13579509 Msa1093570:CDS
ACACTAGCTTACAGTCATGA+CGG 0.653321 7_3:-13581624 Msa1093570:CDS
GAAAAGAAAATGAACCACGC+TGG 0.663833 7_3:+13581861 None:intergenic
GAATGTAAAGAGACCACTGG+AGG 0.665011 7_3:-13579732 Msa1093570:CDS
AGAACTCCAAAACCCTCCAG+TGG 0.680120 7_3:+13579719 None:intergenic
GCTTACAAACTGAAATCACA+TGG 0.682183 7_3:-13586050 Msa1093570:CDS
AGTATGGTTTAGCTTACGCG+CGG 0.685447 7_3:+13587403 None:intergenic
GTAAGCTAAACCATACTGGA+CGG 0.686337 7_3:-13587397 Msa1093570:five_prime_UTR
CTCCAACAAAAGGATCAATG+AGG 0.687378 7_3:+13582889 None:intergenic
ATAACCATCTAGATGTACGA+AGG 0.691928 7_3:-13577701 Msa1093570:three_prime_UTR
AAGCTGAAGGAAGAGCTGGA+GGG 0.694070 7_3:-13586007 Msa1093570:CDS
GATGACATACTTGACGAATG+TGG 0.697352 7_3:+13579108 None:intergenic
CAACTGAGAGTCCACCTCTG+TGG 0.706034 7_3:+13577810 None:intergenic
ATGGTTTAGCTTACGCGCGG+GGG 0.706908 7_3:+13587406 None:intergenic
AATGTAAAGAGACCACTGGA+GGG 0.707965 7_3:-13579731 Msa1093570:CDS
AACAATGCTTCAGACAACAG+TGG 0.735325 7_3:-13577734 Msa1093570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATAAAAAAAAAAAA+TGG + chr7_3:13580906-13580925 None:intergenic 0.0%
!! GTGTAATAAATAAAAAAAAT+TGG - chr7_3:13577947-13577966 Msa1093570:intron 10.0%
!! TTAATATAAATCAAATTTGT+AGG - chr7_3:13579408-13579427 Msa1093570:intron 10.0%
!! TTAATATAAATCAAATTTGT+AGG - chr7_3:13579408-13579427 Msa1093570:intron 10.0%
!!! TTTTAATTTGAATTAGAATA+TGG - chr7_3:13580004-13580023 Msa1093570:intron 10.0%
!!! TTTTTCAATTTTGAAATAAT+TGG - chr7_3:13580225-13580244 Msa1093570:intron 10.0%
!! TAATATATACGATAATATTA+AGG + chr7_3:13583750-13583769 None:intergenic 10.0%
!! AATATAGATGATTTAATATT+AGG + chr7_3:13583990-13584009 None:intergenic 10.0%
!! AATATTATCAAATACATCAA+TGG + chr7_3:13578882-13578901 None:intergenic 15.0%
!! ATTATTGATGAAAAAATCAT+TGG + chr7_3:13579239-13579258 None:intergenic 15.0%
!! TATGCATTAAATTCAAAAAT+GGG + chr7_3:13579365-13579384 None:intergenic 15.0%
!! TTATGCATTAAATTCAAAAA+TGG + chr7_3:13579366-13579385 None:intergenic 15.0%
!! ATAAAAACTGAAAATGAATT+TGG - chr7_3:13579691-13579710 Msa1093570:CDS 15.0%
!! TAAAAACTGAAAATGAATTT+GGG - chr7_3:13579692-13579711 Msa1093570:CDS 15.0%
!! AGAAATTGCTTTATATTATT+GGG + chr7_3:13579924-13579943 None:intergenic 15.0%
!! AAGAAATTGCTTTATATTAT+TGG + chr7_3:13579925-13579944 None:intergenic 15.0%
!!! ATGGATTTTATTATTGAAAT+TGG - chr7_3:13580023-13580042 Msa1093570:intron 15.0%
!!! CTTATCTATATTTTAAAAAG+AGG + chr7_3:13580671-13580690 None:intergenic 15.0%
!!! ATTCTTTTTAATTCTGTTTA+TGG - chr7_3:13580963-13580982 Msa1093570:intron 15.0%
!! TCTATCATTCAATAAATAAA+AGG + chr7_3:13581396-13581415 None:intergenic 15.0%
!! TATATATCGTATTGTTTATT+TGG + chr7_3:13581868-13581887 None:intergenic 15.0%
!!! GATTTTTGTATTTATTGTAT+AGG + chr7_3:13582014-13582033 None:intergenic 15.0%
!!! ATTTTCTAACAATTATTTGA+AGG - chr7_3:13582084-13582103 Msa1093570:intron 15.0%
!! ATATAAATTAATTTAGCTAC+TGG - chr7_3:13582369-13582388 Msa1093570:intron 15.0%
!! ATATAAATAAATTGTAGTCA+CGG - chr7_3:13582446-13582465 Msa1093570:intron 15.0%
!! AAATGAAAACAATATTCAAA+TGG + chr7_3:13583246-13583265 None:intergenic 15.0%
!!! ATTTTTTTTATTTTGTTGTG+TGG - chr7_3:13583706-13583725 Msa1093570:intron 15.0%
!!! TTTTTTTTATTTTGTTGTGT+GGG - chr7_3:13583707-13583726 Msa1093570:intron 15.0%
!!! AAATATTTATGCTTTTATCA+TGG + chr7_3:13584069-13584088 None:intergenic 15.0%
!!! TAGATTAGTAACTTTTAAAT+AGG - chr7_3:13584166-13584185 Msa1093570:intron 15.0%
!! ACAAAAAAATTTACACTTTA+AGG - chr7_3:13584425-13584444 Msa1093570:intron 15.0%
!!! ATTTGATTACATTTTCAAAA+TGG - chr7_3:13585014-13585033 Msa1093570:intron 15.0%
!!! TTTTTCTTATATAAAAAGAG+AGG + chr7_3:13586535-13586554 None:intergenic 15.0%
!! AATATACACTTAAAAAGTTA+TGG - chr7_3:13586929-13586948 Msa1093570:intron 15.0%
!! ATATACACTTAAAAAGTTAT+GGG - chr7_3:13586930-13586949 Msa1093570:intron 15.0%
!!! AATGAATAATGAAATTTTGT+AGG - chr7_3:13587170-13587189 Msa1093570:CDS 15.0%
!! AATGTGTGATAATTCTTTAA+CGG - chr7_3:13577807-13577826 Msa1093570:CDS 20.0%
!! TAACAAGTAAACAAAGTTTA+TGG - chr7_3:13578093-13578112 Msa1093570:intron 20.0%
!!! TTTGTTTCATAATTGCTATT+TGG - chr7_3:13578354-13578373 Msa1093570:intron 20.0%
!! TAAATTCAACTAGTGATAAA+TGG - chr7_3:13578423-13578442 Msa1093570:intron 20.0%
!!! CAATAAAAGTATAAAACAGA+AGG + chr7_3:13578728-13578747 None:intergenic 20.0%
!!! CTTCTGTTTTATACTTTTAT+TGG - chr7_3:13578726-13578745 Msa1093570:intron 20.0%
!!! TTTGATAATATTCATGACAT+TGG - chr7_3:13578890-13578909 Msa1093570:intron 20.0%
!!! TAACAAGTTGAATTTAGTTT+TGG - chr7_3:13579320-13579339 Msa1093570:intron 20.0%
!! TTTATATTAACCCAAAATTC+AGG + chr7_3:13579398-13579417 None:intergenic 20.0%
!! TTTATATTAACCCAAAATTC+AGG + chr7_3:13579398-13579417 None:intergenic 20.0%
!! AAAAACTGAAAATGAATTTG+GGG - chr7_3:13579693-13579712 Msa1093570:CDS 20.0%
!! AGAATCAAGTATCAAATAAA+GGG + chr7_3:13579734-13579753 None:intergenic 20.0%
!! TAGAATCAAGTATCAAATAA+AGG + chr7_3:13579735-13579754 None:intergenic 20.0%
!! TTTATATTATTGGGAAAACA+TGG + chr7_3:13579915-13579934 None:intergenic 20.0%
!!! ATTATTGAAATTGGAAGTTT+TGG - chr7_3:13580032-13580051 Msa1093570:intron 20.0%
!!! ATTTTGAAATAATTGGACTT+CGG - chr7_3:13580232-13580251 Msa1093570:intron 20.0%
!! ATGTGATAACTTATTTAATC+AGG - chr7_3:13580301-13580320 Msa1093570:intron 20.0%
!! ATTGAGGAAAAAAAAGATAT+TGG + chr7_3:13580585-13580604 None:intergenic 20.0%
!! CACTAAAACAAATTAGTTAT+AGG - chr7_3:13581487-13581506 Msa1093570:intron 20.0%
!!! ATAATATATTTTCCTCAAGT+TGG - chr7_3:13581574-13581593 Msa1093570:CDS 20.0%
!! TTGTTACATAGATAATTGAA+TGG - chr7_3:13581621-13581640 Msa1093570:CDS 20.0%
!! ACAATACGATATATACAAAT+TGG - chr7_3:13581873-13581892 Msa1093570:CDS 20.0%
!!! ATCTGTTTGAAATTTATGAA+AGG + chr7_3:13582284-13582303 None:intergenic 20.0%
!! ACATAAATATCAATCAAAAC+AGG + chr7_3:13582790-13582809 None:intergenic 20.0%
!!! GTTTTGATTGATATTTATGT+CGG - chr7_3:13582790-13582809 Msa1093570:intron 20.0%
!! AACAATATTCAAATGGTTAA+TGG + chr7_3:13583239-13583258 None:intergenic 20.0%
!! TAAAAAAAATTCACTTGTCT+TGG + chr7_3:13583696-13583715 None:intergenic 20.0%
!! TAATTACAAAAGATATTTGC+AGG - chr7_3:13583861-13583880 Msa1093570:intron 20.0%
!!! TTGAAGTATTGTTGTTTTAA+TGG + chr7_3:13584036-13584055 None:intergenic 20.0%
!!! AAGTGTAAGTTTATGTTTTA+AGG - chr7_3:13584361-13584380 Msa1093570:intron 20.0%
!!! TTTGAAAACTGAATTTTACT+GGG + chr7_3:13584477-13584496 None:intergenic 20.0%
!!! ATTTGAAAACTGAATTTTAC+TGG + chr7_3:13584478-13584497 None:intergenic 20.0%
!! AATTGAAATATTGTATACCT+CGG + chr7_3:13584960-13584979 None:intergenic 20.0%
!! AAGTAAATCAATTGAAATCT+AGG + chr7_3:13584986-13585005 None:intergenic 20.0%
!! TTACTTAGATAGAAATTAGT+TGG + chr7_3:13585660-13585679 None:intergenic 20.0%
!! ATAGGATATACATAAATTAG+TGG - chr7_3:13586236-13586255 Msa1093570:intron 20.0%
!! TAGGATATACATAAATTAGT+GGG - chr7_3:13586237-13586256 Msa1093570:intron 20.0%
!! TGTGATTAATGAATATAACA+AGG + chr7_3:13587014-13587033 None:intergenic 20.0%
!!! TTTATTCTGAAATGCAAAAT+TGG - chr7_3:13587417-13587436 Msa1093570:five_prime_UTR 20.0%
!!! TTATTCTGAAATGCAAAATT+GGG - chr7_3:13587418-13587437 Msa1093570:five_prime_UTR 20.0%
! AATGAAGAAAAATTGTGTCT+AGG - chr7_3:13577762-13577781 Msa1093570:CDS 25.0%
! AAAAAAAATTGGCCGAATTA+TGG - chr7_3:13577958-13577977 Msa1093570:intron 25.0%
! TTGAATGTAATAACATGTGT+TGG - chr7_3:13578012-13578031 Msa1093570:intron 25.0%
! AAGTTTATGGAAAGCTTATA+TGG - chr7_3:13578106-13578125 Msa1093570:intron 25.0%
! AAAAGATGATTGTTTGCAAT+TGG - chr7_3:13578383-13578402 Msa1093570:intron 25.0%
!!! TTCAATTATGTCATTTTCTC+AGG + chr7_3:13577997-13578016 None:intergenic 25.0%
! ATAAAACAGAAGGAAGAAAA+GGG + chr7_3:13578718-13578737 None:intergenic 25.0%
! TATAAAACAGAAGGAAGAAA+AGG + chr7_3:13578719-13578738 None:intergenic 25.0%
! CTAATCTATATTATACTCCA+TGG - chr7_3:13578844-13578863 Msa1093570:intron 25.0%
! ATAATATGATCCAAAATCGA+TGG + chr7_3:13579180-13579199 None:intergenic 25.0%
!! TGATGAAAAAATCATTGGTT+TGG + chr7_3:13579234-13579253 None:intergenic 25.0%
! CATTAAATTCAAAAATGGGT+GGG + chr7_3:13579361-13579380 None:intergenic 25.0%
! GAAAATGAAATAGAGGTTAA+AGG - chr7_3:13579810-13579829 Msa1093570:intron 25.0%
!! ACAATATGTAAGCATGTTTT+TGG - chr7_3:13579866-13579885 Msa1093570:intron 25.0%
!! CAATATGTAAGCATGTTTTT+GGG - chr7_3:13579867-13579886 Msa1093570:intron 25.0%
!!! AATTGGAAGTTTTGGAATAT+TGG - chr7_3:13580040-13580059 Msa1093570:intron 25.0%
!!! AAAAACGCATTTTAGAAAGT+CGG + chr7_3:13580204-13580223 None:intergenic 25.0%
! GACACAAATTTCTGTAAAAT+CGG + chr7_3:13580269-13580288 None:intergenic 25.0%
! AAACAGGAAATGTTATACAA+TGG + chr7_3:13580510-13580529 None:intergenic 25.0%
! AAAAAGTTATAACAGGAAAC+AGG + chr7_3:13580526-13580545 None:intergenic 25.0%
!!! TTTTTTTTCCTCAATTTCTG+TGG - chr7_3:13580590-13580609 Msa1093570:intron 25.0%
! ATAAGTTAACAGAACTTTGA+GGG - chr7_3:13580686-13580705 Msa1093570:intron 25.0%
! TTGTTCATATATCTGATTGT+AGG + chr7_3:13580742-13580761 None:intergenic 25.0%
! TAAGTAGCTATATTTAGAAG+AGG + chr7_3:13580998-13581017 None:intergenic 25.0%
!!! TCATTTTTGAACCATTTATG+TGG - chr7_3:13581087-13581106 Msa1093570:intron 25.0%
! ATCTATGTTGTTGAAATACA+TGG + chr7_3:13581443-13581462 None:intergenic 25.0%
! TTGTAAAATATCGTGCAAAT+AGG + chr7_3:13581523-13581542 None:intergenic 25.0%
! AATTATCTATGTAACAAGCT+TGG + chr7_3:13581618-13581637 None:intergenic 25.0%
! TTACATAGATAATTGAATGG+AGG - chr7_3:13581624-13581643 Msa1093570:CDS 25.0%
!! GTTTGAAATTTATGAAAGGT+AGG + chr7_3:13582280-13582299 None:intergenic 25.0%
!! ATACATCGACTAATAGTAAA+AGG + chr7_3:13582483-13582502 None:intergenic 25.0%
! TGATATATCGTACATTTCTA+GGG + chr7_3:13582980-13582999 None:intergenic 25.0%
! ATGATATATCGTACATTTCT+AGG + chr7_3:13582981-13583000 None:intergenic 25.0%
! CATTTCTTTCTTTACTTTGT+TGG - chr7_3:13582998-13583017 Msa1093570:intron 25.0%
! TGACATTAAATTAAATGCGA+AGG - chr7_3:13583354-13583373 Msa1093570:intron 25.0%
! GAAAGAACAAAATGGAAAAA+GGG + chr7_3:13583500-13583519 None:intergenic 25.0%
! AGAAAGAACAAAATGGAAAA+AGG + chr7_3:13583501-13583520 None:intergenic 25.0%
!!! ATGTTTTTTTTCCCATATGA+TGG - chr7_3:13583664-13583683 Msa1093570:intron 25.0%
!!! TGTTTTTTTTCCCATATGAT+GGG - chr7_3:13583665-13583684 Msa1093570:intron 25.0%
!!! AGTTTTGAAGACAAAAATCA+TGG - chr7_3:13584113-13584132 Msa1093570:intron 25.0%
! TTTATAAGACCAAACAGAAA+CGG - chr7_3:13584194-13584213 Msa1093570:intron 25.0%
!!! ATTTTTTTGTCAACGTTGTA+TGG + chr7_3:13584415-13584434 None:intergenic 25.0%
! TAAGCAATTCTACATTAGTT+TGG + chr7_3:13584451-13584470 None:intergenic 25.0%
! ACTGTTTATAACTTTAGACT+TGG - chr7_3:13584848-13584867 Msa1093570:CDS 25.0%
! CTGTTTATAACTTTAGACTT+GGG - chr7_3:13584849-13584868 Msa1093570:CDS 25.0%
! ATTGAAATATTGTATACCTC+GGG + chr7_3:13584959-13584978 None:intergenic 25.0%
!! CTTAATAACCACCTTTAAAA+AGG - chr7_3:13585250-13585269 Msa1093570:intron 25.0%
!! CTTTACATTCTCCTTTTTAA+AGG + chr7_3:13585264-13585283 None:intergenic 25.0%
! TCAGAGTATAATAACAGTAT+AGG + chr7_3:13585565-13585584 None:intergenic 25.0%
!! TACACAGAAGTTGATTAAAT+AGG - chr7_3:13585703-13585722 Msa1093570:intron 25.0%
!! AGAAGTTGATTAAATAGGAA+TGG - chr7_3:13585708-13585727 Msa1093570:intron 25.0%
! CTTTATATGGTCATAACTAT+GGG - chr7_3:13586002-13586021 Msa1093570:CDS 25.0%
!! GCTTCAAATACAAATAGTTT+TGG - chr7_3:13586101-13586120 Msa1093570:intron 25.0%
!!! CAAATACAAATAGTTTTGGT+CGG - chr7_3:13586105-13586124 Msa1093570:intron 25.0%
! TTATTAGCTCAAATTCACAT+GGG - chr7_3:13586177-13586196 Msa1093570:intron 25.0%
! ATGTATATCCTATTCATAAG+TGG + chr7_3:13586229-13586248 None:intergenic 25.0%
!! TGTTACTAGTTAGCTTATTA+TGG + chr7_3:13586356-13586375 None:intergenic 25.0%
!!! AGTTTTGACATAACTTTGAA+TGG - chr7_3:13586582-13586601 Msa1093570:intron 25.0%
! TATTTGAGCACTTGAAAATT+GGG + chr7_3:13586717-13586736 None:intergenic 25.0%
! ATATTTGAGCACTTGAAAAT+TGG + chr7_3:13586718-13586737 None:intergenic 25.0%
!! TTTTACCATACAAAACCATT+GGG + chr7_3:13586803-13586822 None:intergenic 25.0%
!! TTCAAATGTACATGATCTTT+TGG - chr7_3:13586864-13586883 Msa1093570:intron 25.0%
! GAAATCTTATTCTAACATGA+AGG + chr7_3:13587093-13587112 None:intergenic 25.0%
! TTCAAATTCAAAATGGAGTT+GGG + chr7_3:13587354-13587373 None:intergenic 25.0%
! TTTCAAATTCAAAATGGAGT+TGG + chr7_3:13587355-13587374 None:intergenic 25.0%
!! ACTCCATTTTGAATTTGAAA+AGG - chr7_3:13587355-13587374 Msa1093570:intron 25.0%
!! CTTCCTTTTCAAATTCAAAA+TGG + chr7_3:13587361-13587380 None:intergenic 25.0%
AATGATATTCAAAACCCTCA+CGG + chr7_3:13578233-13578252 None:intergenic 30.0%
GGATGAAAAATGAACTAACA+AGG - chr7_3:13578310-13578329 Msa1093570:intron 30.0%
TAACAATGAAATGCCAACAT+CGG - chr7_3:13578487-13578506 Msa1093570:intron 30.0%
! ACATCTTCAATTAGAAGTGT+TGG - chr7_3:13578572-13578591 Msa1093570:intron 30.0%
GGTTGAAGATACTAAGAATA+GGG + chr7_3:13578637-13578656 None:intergenic 30.0%
TGTATTTCATGAATGCTGTT+TGG - chr7_3:13578794-13578813 Msa1093570:intron 30.0%
! AGCATCTTTTATGTTAGAGT+AGG - chr7_3:13579289-13579308 Msa1093570:intron 30.0%
! ATCTTTTATGTTAGAGTAGG+AGG - chr7_3:13579292-13579311 Msa1093570:intron 30.0%
GCATTAAATTCAAAAATGGG+TGG + chr7_3:13579362-13579381 None:intergenic 30.0%
TATTAACCCAAAATTCAGGA+GGG + chr7_3:13579394-13579413 None:intergenic 30.0%
ATATTAACCCAAAATTCAGG+AGG + chr7_3:13579395-13579414 None:intergenic 30.0%
TATTAACCCAAAATTCAGGA+CGG + chr7_3:13579394-13579413 None:intergenic 30.0%
!! ACTCAACATTCTACTTTTGA+CGG - chr7_3:13579564-13579583 Msa1093570:CDS 30.0%
TTTAATCCAACCAAAACTTG+AGG - chr7_3:13579640-13579659 Msa1093570:intron 30.0%
TTAATCCAACCAAAACTTGA+GGG - chr7_3:13579641-13579660 Msa1093570:intron 30.0%
! AATACATAACCCTCAAGTTT+TGG + chr7_3:13579653-13579672 None:intergenic 30.0%
!!! ACATTTTAAAGCAGTCATCA+GGG + chr7_3:13579960-13579979 None:intergenic 30.0%
!!! AACATTTTAAAGCAGTCATC+AGG + chr7_3:13579961-13579980 None:intergenic 30.0%
! AATATTGGTGATTGATCTAC+CGG - chr7_3:13580055-13580074 Msa1093570:intron 30.0%
AAGCGCTATATTGTGAAAAA+TGG - chr7_3:13580145-13580164 Msa1093570:intron 30.0%
AGCGCTATATTGTGAAAAAT+GGG - chr7_3:13580146-13580165 Msa1093570:intron 30.0%
AATAATTGGACTTCGGAAAT+TGG - chr7_3:13580239-13580258 Msa1093570:intron 30.0%
CCAACAAAAGATAAAACACT+TGG + chr7_3:13580410-13580429 None:intergenic 30.0%
! CCAAGTGTTTTATCTTTTGT+TGG - chr7_3:13580407-13580426 Msa1093570:intron 30.0%
!! TGTTATACAATGGATTGCAA+AGG + chr7_3:13580500-13580519 None:intergenic 30.0%
! CCTTTGGAAAAAGTTATAAC+AGG + chr7_3:13580533-13580552 None:intergenic 30.0%
!! CCTGTTATAACTTTTTCCAA+AGG - chr7_3:13580530-13580549 Msa1093570:intron 30.0%
!! ACTTTTTCCAAAGGTAGATT+TGG - chr7_3:13580539-13580558 Msa1093570:intron 30.0%
! CTTTTTCCAAAGGTAGATTT+GGG - chr7_3:13580540-13580559 Msa1093570:intron 30.0%
GATAAGTTAACAGAACTTTG+AGG - chr7_3:13580685-13580704 Msa1093570:intron 30.0%
CTGAATCTGCAAATTTAGAA+AGG + chr7_3:13581066-13581085 None:intergenic 30.0%
CTTTCTAAATTTGCAGATTC+AGG - chr7_3:13581064-13581083 Msa1093570:intron 30.0%
! TCACTTCTTTTCCACATAAA+TGG + chr7_3:13581101-13581120 None:intergenic 30.0%
! TTCAGAATTTTCATCAGACA+CGG + chr7_3:13581132-13581151 None:intergenic 30.0%
! CTGATGAAAATTCTGAAGAA+AGG - chr7_3:13581135-13581154 Msa1093570:intron 30.0%
AAAACTAGGATCCATTATTG+AGG + chr7_3:13581170-13581189 None:intergenic 30.0%
!! GAGCAAGGTTTTATAAAACT+AGG + chr7_3:13581184-13581203 None:intergenic 30.0%
ATATAAATATGCAGAGAGCA+AGG + chr7_3:13581199-13581218 None:intergenic 30.0%
ATATATACAAATTGGCCGAA+TGG - chr7_3:13581881-13581900 Msa1093570:CDS 30.0%
TAACAATTATTTGAAGGTCG+TGG - chr7_3:13582090-13582109 Msa1093570:intron 30.0%
! GATTGGTTGTGATTTATTGA+TGG + chr7_3:13582554-13582573 None:intergenic 30.0%
! TTTAAAGTCACACATACGAT+TGG + chr7_3:13582571-13582590 None:intergenic 30.0%
TTCAATAGAGAAGAAAGAGA+GGG + chr7_3:13582851-13582870 None:intergenic 30.0%
ATTCAATAGAGAAGAAAGAG+AGG + chr7_3:13582852-13582871 None:intergenic 30.0%
ATAGTGAGGAAGGATTTATT+TGG + chr7_3:13582899-13582918 None:intergenic 30.0%
AATAAATCCTTCCTCACTAT+TGG - chr7_3:13582899-13582918 Msa1093570:CDS 30.0%
ATAAATCCTTCCTCACTATT+GGG - chr7_3:13582900-13582919 Msa1093570:CDS 30.0%
! TTACTTTGTTGGTTACTATG+TGG - chr7_3:13583009-13583028 Msa1093570:intron 30.0%
! CATCAACATCTTGTGTTTTT+CGG + chr7_3:13583450-13583469 None:intergenic 30.0%
TGTTGATGCAGTAATTATGA+CGG - chr7_3:13583462-13583481 Msa1093570:intron 30.0%
AGTAATTATGACGGTTAGTA+TGG - chr7_3:13583471-13583490 Msa1093570:intron 30.0%
GTATTCGAGAAAGAACAAAA+TGG + chr7_3:13583508-13583527 None:intergenic 30.0%
GTTAGATAGACACAAAAAGA+CGG - chr7_3:13583621-13583640 Msa1093570:intron 30.0%
TTCACATATATAGCACTTTC+AGG + chr7_3:13583773-13583792 None:intergenic 30.0%
AAACTCTTACAAGCTTACAA+AGG + chr7_3:13583966-13583985 None:intergenic 30.0%
! TTTATGCTTTTATCATGGAG+TGG + chr7_3:13584064-13584083 None:intergenic 30.0%
! CAAAAAAGTGTATCACGATT+AGG + chr7_3:13584292-13584311 None:intergenic 30.0%
TTACCAAAAGAGAGTTTACA+TGG - chr7_3:13584529-13584548 Msa1093570:intron 30.0%
TACCAAAAGAGAGTTTACAT+GGG - chr7_3:13584530-13584549 Msa1093570:intron 30.0%
!!! ACTTTTGAGTTTACAATCCT+AGG + chr7_3:13584575-13584594 None:intergenic 30.0%
AATGTCTATTGATGGAGATA+TGG - chr7_3:13584626-13584645 Msa1093570:intron 30.0%
ATGTCTATTGATGGAGATAT+GGG - chr7_3:13584627-13584646 Msa1093570:intron 30.0%
! CTGCATTTTGTAATATGCAT+AGG - chr7_3:13584664-13584683 Msa1093570:CDS 30.0%
AGAACAACATCTATCAGTAA+GGG - chr7_3:13585137-13585156 Msa1093570:intron 30.0%
! ACAAGCTATAACCTATTTCT+TGG - chr7_3:13585175-13585194 Msa1093570:CDS 30.0%
CTGTTGTTAAACCAAGAAAT+AGG + chr7_3:13585189-13585208 None:intergenic 30.0%
!! TACATTCTCCTTTTTAAAGG+TGG + chr7_3:13585261-13585280 None:intergenic 30.0%
!!! CAAAATGGTTTTAAAACCCT+TGG - chr7_3:13585329-13585348 Msa1093570:intron 30.0%
!!! TTTTAGTTTTCTTGAGCCAT+AGG + chr7_3:13585370-13585389 None:intergenic 30.0%
TGGCTCAAGAAAACTAAAAT+AGG - chr7_3:13585371-13585390 Msa1093570:intron 30.0%
TTGAAATAACTTCTGAGTTC+TGG - chr7_3:13585405-13585424 Msa1093570:intron 30.0%
GATTGCAATAGATACGTATA+AGG + chr7_3:13585611-13585630 None:intergenic 30.0%
TGATTAAATAGGAATGGCAA+TGG - chr7_3:13585714-13585733 Msa1093570:intron 30.0%
AGTAAAGGCTTTCCTTTATA+TGG - chr7_3:13585989-13586008 Msa1093570:CDS 30.0%
CCATAGTTATGACCATATAA+AGG + chr7_3:13586004-13586023 None:intergenic 30.0%
CCTTTATATGGTCATAACTA+TGG - chr7_3:13586001-13586020 Msa1093570:CDS 30.0%
TCTTGAAGCAATTGACAAAA+TGG - chr7_3:13586030-13586049 Msa1093570:CDS 30.0%
GTTATTAGCTCAAATTCACA+TGG - chr7_3:13586176-13586195 Msa1093570:intron 30.0%
ATATCCTATTCATAAGTGGT+AGG + chr7_3:13586225-13586244 None:intergenic 30.0%
! CAAAGTTTGACTTAAAGAGT+AGG + chr7_3:13586388-13586407 None:intergenic 30.0%
GTAGTAGATGATTGATAAGT+TGG + chr7_3:13586672-13586691 None:intergenic 30.0%
ATTTGAGCACTTGAAAATTG+GGG + chr7_3:13586716-13586735 None:intergenic 30.0%
! CTTTTACCATACAAAACCAT+TGG + chr7_3:13586804-13586823 None:intergenic 30.0%
ATGTACATTTGAACCCAATT+TGG + chr7_3:13586857-13586876 None:intergenic 30.0%
GTGTATATTTGAACAAACTG+TGG + chr7_3:13586918-13586937 None:intergenic 30.0%
TCAAATTCAAAATGGAGTTG+GGG + chr7_3:13587353-13587372 None:intergenic 30.0%
! GTTAAAAGAGTTGCTGTTGT+TGG - chr7_3:13577843-13577862 Msa1093570:intron 35.0%
!! GTCATTTTCTCAAATTACCG+TGG + chr7_3:13577988-13578007 None:intergenic 35.0%
GCATCAACACTTCTAATTGA+AGG + chr7_3:13578056-13578075 None:intergenic 35.0%
AACGAATTAAAGTATGTGCG+AGG - chr7_3:13578259-13578278 Msa1093570:intron 35.0%
ACGAATTAAAGTATGTGCGA+GGG - chr7_3:13578260-13578279 Msa1093570:intron 35.0%
TGTTAATGTTGTGTTCGTGT+TGG + chr7_3:13578472-13578491 None:intergenic 35.0%
TTGAATGTAATCGCATGTGT+TGG - chr7_3:13578534-13578553 Msa1093570:intron 35.0%
CTTCTAATTGAAGATGTGTC+TGG + chr7_3:13578569-13578588 None:intergenic 35.0%
GAAGATACTAAGAATAGGGA+AGG + chr7_3:13578633-13578652 None:intergenic 35.0%
GGGTTGAAGATACTAAGAAT+AGG + chr7_3:13578638-13578657 None:intergenic 35.0%
GAATAGGAATTCTGCTATAG+AGG + chr7_3:13578684-13578703 None:intergenic 35.0%
AATGGTAATAATGTGCACCA+TGG + chr7_3:13578864-13578883 None:intergenic 35.0%
!!! CACTGTCTAACTTTGTTTTC+TGG - chr7_3:13578913-13578932 Msa1093570:intron 35.0%
!! TTTGTTTTCTGGTGTCAAGT+GGG - chr7_3:13578924-13578943 Msa1093570:intron 35.0%
GCTTACAAACTGAAATCACA+TGG - chr7_3:13578956-13578975 Msa1093570:intron 35.0%
! GTAACTGTATTTGAAGCTGA+AGG - chr7_3:13578986-13579005 Msa1093570:intron 35.0%
! TAAGAACTGTTTCTCGAGAT+GGG - chr7_3:13579026-13579045 Msa1093570:CDS 35.0%
ATGATCCAAAATCGATGGAT+TGG + chr7_3:13579175-13579194 None:intergenic 35.0%
! GTGTTAGTTTCACATCTCAT+AGG + chr7_3:13579608-13579627 None:intergenic 35.0%
GCAGACTGAAAATGAAATAG+AGG - chr7_3:13579803-13579822 Msa1093570:intron 35.0%
AAAGGTTTGATTGATGCTCT+TGG - chr7_3:13579828-13579847 Msa1093570:intron 35.0%
!!! CATTTTAAAGCAGTCATCAG+GGG + chr7_3:13579959-13579978 None:intergenic 35.0%
! ATATTGGTGATTGATCTACC+GGG - chr7_3:13580056-13580075 Msa1093570:intron 35.0%
CAGAACAAATATGTAATCCC+CGG + chr7_3:13580077-13580096 None:intergenic 35.0%
ACTTCTTTCTGCACAATCAA+AGG - chr7_3:13580358-13580377 Msa1093570:intron 35.0%
GTTTCTTTCTCAGATCTCTA+AGG - chr7_3:13580380-13580399 Msa1093570:intron 35.0%
GTTCATTCCAATGATCTACT+GGG + chr7_3:13580636-13580655 None:intergenic 35.0%
AGTTCATTCCAATGATCTAC+TGG + chr7_3:13580637-13580656 None:intergenic 35.0%
!!! TTGAGGTTTTGACTTGACTT+AGG - chr7_3:13580807-13580826 Msa1093570:intron 35.0%
CATATACCTCTTTCCCAAAA+TGG + chr7_3:13581295-13581314 None:intergenic 35.0%
GTATATGTCACATTACCTTG+AGG - chr7_3:13581308-13581327 Msa1093570:intron 35.0%
CCATAAGCAGAAAGGAAAAT+GGG + chr7_3:13581337-13581356 None:intergenic 35.0%
TATAGTAGCCATAAGCAGAA+AGG + chr7_3:13581345-13581364 None:intergenic 35.0%
TGATTATATGCTCCAACTTG+AGG + chr7_3:13581589-13581608 None:intergenic 35.0%
AATGAAGCAGCATTGCATAT+TGG + chr7_3:13581786-13581805 None:intergenic 35.0%
TGTTACTCAGAGCTTCATTA+TGG + chr7_3:13581838-13581857 None:intergenic 35.0%
!! CTCTGTTTTTCATCTCCATT+CGG + chr7_3:13581899-13581918 None:intergenic 35.0%
GAATGGAGATGAAAAACAGA+GGG - chr7_3:13581898-13581917 Msa1093570:CDS 35.0%
TCATTCTTGCTTATCATCAG+TGG + chr7_3:13581954-13581973 None:intergenic 35.0%
! TACCTCATTGATCCTTTTGT+TGG - chr7_3:13582115-13582134 Msa1093570:intron 35.0%
AACTCACAGAAAGAGATTCA+GGG + chr7_3:13582159-13582178 None:intergenic 35.0%
AAACTCACAGAAAGAGATTC+AGG + chr7_3:13582160-13582179 None:intergenic 35.0%
AGCTATGGAATTTGGAGAAA+AGG - chr7_3:13582321-13582340 Msa1093570:intron 35.0%
! GACTAATAGTAAAAGGCACA+AGG + chr7_3:13582476-13582495 None:intergenic 35.0%
TCAATAGAGAAGAAAGAGAG+GGG + chr7_3:13582850-13582869 None:intergenic 35.0%
GAGGAAGGATTTATTTGGTT+GGG + chr7_3:13582894-13582913 None:intergenic 35.0%
TGAGGAAGGATTTATTTGGT+TGG + chr7_3:13582895-13582914 None:intergenic 35.0%
ACATGAATTATGAGCCAATC+AGG - chr7_3:13582950-13582969 Msa1093570:intron 35.0%
CATGAATTATGAGCCAATCA+GGG - chr7_3:13582951-13582970 Msa1093570:intron 35.0%
!!! TGGATTTTCTGTTTCAGGTT+TGG - chr7_3:13583032-13583051 Msa1093570:intron 35.0%
ATCCAGCGTATTTGGAAAAA+AGG - chr7_3:13583079-13583098 Msa1093570:intron 35.0%
TTTGGAAAAAAGGACAAAGC+TGG - chr7_3:13583089-13583108 Msa1093570:intron 35.0%
! CGTGGTTCATTTTCTTTTCA+GGG - chr7_3:13583149-13583168 Msa1093570:intron 35.0%
!! GTTCATTTTCTTTTCAGGGT+GGG - chr7_3:13583153-13583172 Msa1093570:intron 35.0%
!! TAATGGCTCTAATCAAACAC+AGG + chr7_3:13583222-13583241 None:intergenic 35.0%
! TAATAGACCAGTTTTGCGAT+GGG + chr7_3:13583414-13583433 None:intergenic 35.0%
GTAATGGCATACTCTCTTAA+TGG - chr7_3:13583595-13583614 Msa1093570:intron 35.0%
GTGCAAAGTAACATTAGCAT+TGG + chr7_3:13583830-13583849 None:intergenic 35.0%
CGATTAGGTCAAATTATGCT+GGG + chr7_3:13584277-13584296 None:intergenic 35.0%
ACGATTAGGTCAAATTATGC+TGG + chr7_3:13584278-13584297 None:intergenic 35.0%
!! CTAACTGATTTTTGTGACCT+AGG - chr7_3:13584555-13584574 Msa1093570:intron 35.0%
TGACCATGAATGTCTATTGA+TGG - chr7_3:13584618-13584637 Msa1093570:intron 35.0%
TCTCCATCAATAGACATTCA+TGG + chr7_3:13584624-13584643 None:intergenic 35.0%
TTATGAGGCTCTATTTGACT+TGG - chr7_3:13584787-13584806 Msa1093570:intron 35.0%
AGTAAGAATGTGTCTGTGTT+TGG + chr7_3:13584831-13584850 None:intergenic 35.0%
AAGAAAATTAAGTGGGAAGG+GGG + chr7_3:13584936-13584955 None:intergenic 35.0%
GAAGAAAATTAAGTGGGAAG+GGG + chr7_3:13584937-13584956 None:intergenic 35.0%
GGAAGAAAATTAAGTGGGAA+GGG + chr7_3:13584938-13584957 None:intergenic 35.0%
CAGAACAACATCTATCAGTA+AGG - chr7_3:13585136-13585155 Msa1093570:intron 35.0%
TAAGACTGAGAGTGGTAAAT+AGG + chr7_3:13585234-13585253 None:intergenic 35.0%
! CCATTTTGTTGCTCTTTTGA+AGG + chr7_3:13585317-13585336 None:intergenic 35.0%
CCTTCAAAAGAGCAACAAAA+TGG - chr7_3:13585314-13585333 Msa1093570:intron 35.0%
!!! TCTGGCTTATTTTGCACAAT+AGG - chr7_3:13585423-13585442 Msa1093570:intron 35.0%
GTATAGAGATGCATATCACT+GGG + chr7_3:13585486-13585505 None:intergenic 35.0%
ATCTCTATACCACCTTCATA+GGG - chr7_3:13585496-13585515 Msa1093570:intron 35.0%
! AATTTTCTTAAGCTCGTCAC+TGG + chr7_3:13585835-13585854 None:intergenic 35.0%
ATGACATACTTGACGAATGT+GGG + chr7_3:13585900-13585919 None:intergenic 35.0%
AAAATGGAAAAAGATCTCCC+TGG - chr7_3:13586046-13586065 Msa1093570:CDS 35.0%
TACCAGCATAGAAAAATCCA+GGG + chr7_3:13586066-13586085 None:intergenic 35.0%
TTACCAGCATAGAAAAATCC+AGG + chr7_3:13586067-13586086 None:intergenic 35.0%
TCTATGCTGGTAAGTTCTTA+TGG - chr7_3:13586074-13586093 Msa1093570:intron 35.0%
AGGACCCATATTCAAAATAG+CGG + chr7_3:13586205-13586224 None:intergenic 35.0%
ACTCTCTAGCACTCTATTAT+CGG + chr7_3:13586280-13586299 None:intergenic 35.0%
TCCGTCTAAGTTAACATAAG+TGG - chr7_3:13586434-13586453 Msa1093570:intron 35.0%
CCCACTTATGTTAACTTAGA+CGG + chr7_3:13586438-13586457 None:intergenic 35.0%
CCGTCTAAGTTAACATAAGT+GGG - chr7_3:13586435-13586454 Msa1093570:intron 35.0%
TCTAAGTTAACATAAGTGGG+TGG - chr7_3:13586438-13586457 Msa1093570:intron 35.0%
CATTCACAACATTACACAAG+GGG + chr7_3:13586494-13586513 None:intergenic 35.0%
GCATTCACAACATTACACAA+GGG + chr7_3:13586495-13586514 None:intergenic 35.0%
AGCATTCACAACATTACACA+AGG + chr7_3:13586496-13586515 None:intergenic 35.0%
CGTAATTCATAATCCTAACC+AGG + chr7_3:13586775-13586794 None:intergenic 35.0%
TATCCACTTACCATCCAAAT+TGG - chr7_3:13586840-13586859 Msa1093570:intron 35.0%
ATCCACTTACCATCCAAATT+GGG - chr7_3:13586841-13586860 Msa1093570:intron 35.0%
ACATTTGAACCCAATTTGGA+TGG + chr7_3:13586853-13586872 None:intergenic 35.0%
! AATTTTGTAGGTAACCACAG+AGG - chr7_3:13587182-13587201 Msa1093570:intron 35.0%
!! TGTTGTCTGAAGCATTGTTT+AGG + chr7_3:13587271-13587290 None:intergenic 35.0%
ATAACCATCTAGATGTACGA+AGG - chr7_3:13587305-13587324 Msa1093570:intron 35.0%
CAAATTCAAAATGGAGTTGG+GGG + chr7_3:13587352-13587371 None:intergenic 35.0%
GTAAGCTAAACCATACTGGA+CGG - chr7_3:13577609-13577628 Msa1093570:three_prime_UTR 40.0%
! ATTACCATCTTTTGCAGAGG+AGG + chr7_3:13577653-13577672 None:intergenic 40.0%
! TGGATTACCATCTTTTGCAG+AGG + chr7_3:13577656-13577675 None:intergenic 40.0%
GAGAGAGGAAAGAAGTTACT+TGG + chr7_3:13577676-13577695 None:intergenic 40.0%
TAATTCTTTAACGGCTCTGC+AGG - chr7_3:13577816-13577835 Msa1093570:CDS 40.0%
TACCGTGGCTAACCATAATT+CGG + chr7_3:13577973-13577992 None:intergenic 40.0%
! CTTCTAATTGAAGGTGTGTC+CGG + chr7_3:13578047-13578066 None:intergenic 40.0%
AGGACAAAACCTCGTGTTAA+GGG + chr7_3:13578203-13578222 None:intergenic 40.0%
TAGGACAAAACCTCGTGTTA+AGG + chr7_3:13578204-13578223 None:intergenic 40.0%
GATTGTTTGCAATTGGAACG+TGG - chr7_3:13578390-13578409 Msa1093570:intron 40.0%
TTTGCAATTGGAACGTGGTA+TGG - chr7_3:13578395-13578414 Msa1093570:intron 40.0%
! TTGGTGATTCATAGGTTACG+AGG + chr7_3:13578453-13578472 None:intergenic 40.0%
!! TGTTCGTGTTGGTGATTCAT+AGG + chr7_3:13578461-13578480 None:intergenic 40.0%
AATTCTGCTATAGAGGAAGG+GGG + chr7_3:13578677-13578696 None:intergenic 40.0%
GAATTCTGCTATAGAGGAAG+GGG + chr7_3:13578678-13578697 None:intergenic 40.0%
GGAATTCTGCTATAGAGGAA+GGG + chr7_3:13578679-13578698 None:intergenic 40.0%
AGGAATTCTGCTATAGAGGA+AGG + chr7_3:13578680-13578699 None:intergenic 40.0%
! AAGGGATTGGTACTGAGAAT+AGG + chr7_3:13578700-13578719 None:intergenic 40.0%
ACAGAAGGAAGAAAAGGGAT+TGG + chr7_3:13578713-13578732 None:intergenic 40.0%
AGCATACAAACTGATGAGCT+GGG + chr7_3:13578770-13578789 None:intergenic 40.0%
TAGCATACAAACTGATGAGC+TGG + chr7_3:13578771-13578790 None:intergenic 40.0%
!!! CTTTGTTTTCTGGTGTCAAG+TGG - chr7_3:13578923-13578942 Msa1093570:intron 40.0%
TGATTTCAGTTTGTAAGCCG+CGG + chr7_3:13578954-13578973 None:intergenic 40.0%
! CTAAGAACTGTTTCTCGAGA+TGG - chr7_3:13579025-13579044 Msa1093570:CDS 40.0%
!!! TGTCACCAATCCATCGATTT+TGG - chr7_3:13579167-13579186 Msa1093570:CDS 40.0%
! AACACAACCCTCCTGAATTT+TGG - chr7_3:13579384-13579403 Msa1093570:intron 40.0%
! ACACAACCCTCCTGAATTTT+GGG - chr7_3:13579385-13579404 Msa1093570:intron 40.0%
!! TGTAGGTTTTGACATCCCAT+AGG - chr7_3:13579425-13579444 Msa1093570:intron 40.0%
!! GTTTTGACATCCCATAGGTA+GGG - chr7_3:13579430-13579449 Msa1093570:intron 40.0%
GCACTAAATTCCCTACCTAT+GGG + chr7_3:13579443-13579462 None:intergenic 40.0%
TGCACTAAATTCCCTACCTA+TGG + chr7_3:13579444-13579463 None:intergenic 40.0%
! ACACAAACCGTCCTGAATTT+TGG - chr7_3:13579466-13579485 Msa1093570:intron 40.0%
! CACAAACCGTCCTGAATTTT+GGG - chr7_3:13579467-13579486 Msa1093570:intron 40.0%
! TGTAGGTTTTTACATCCCAC+TGG - chr7_3:13579507-13579526 Msa1093570:CDS 40.0%
! TAGAATGTTGAGTAGCTTGC+AGG + chr7_3:13579557-13579576 None:intergenic 40.0%
!! CATAACCCTCAAGTTTTGGT+TGG + chr7_3:13579649-13579668 None:intergenic 40.0%
! CATTTTCAGTCTGCACAAAG+AGG + chr7_3:13579797-13579816 None:intergenic 40.0%
!!! ATGTAAGCATGTTTTTGGGC+AGG - chr7_3:13579871-13579890 Msa1093570:intron 40.0%
AACATGGTCTCTCTCATACA+AGG + chr7_3:13579899-13579918 None:intergenic 40.0%
! TATTGGTGATTGATCTACCG+GGG - chr7_3:13580057-13580076 Msa1093570:intron 40.0%
GTATGTCCCAAATCTACCTT+TGG + chr7_3:13580549-13580568 None:intergenic 40.0%
AGATATTGGCAGATGCTATG+AGG + chr7_3:13580571-13580590 None:intergenic 40.0%
GACAGTTACCACAGAAATTG+AGG + chr7_3:13580601-13580620 None:intergenic 40.0%
AATGATCTACTGGGTCCTAT+CGG + chr7_3:13580627-13580646 None:intergenic 40.0%
! GAACTTTGAGGGTTTCACTT+AGG - chr7_3:13580697-13580716 Msa1093570:intron 40.0%
AATGTAGAACTTGTGCAGCT+CGG - chr7_3:13580760-13580779 Msa1093570:intron 40.0%
ACTCCTGTGTCTTAGAACTT+GGG + chr7_3:13580838-13580857 None:intergenic 40.0%
TCTGTAATGCGATTCACTCA+AGG - chr7_3:13580857-13580876 Msa1093570:intron 40.0%
GGTGTGCTAAACCTCAATAA+TGG - chr7_3:13581156-13581175 Msa1093570:intron 40.0%
! AGATTCTTCGAACGCCATTT+TGG - chr7_3:13581278-13581297 Msa1093570:intron 40.0%
!! GATTCTTCGAACGCCATTTT+GGG - chr7_3:13581279-13581298 Msa1093570:intron 40.0%
! CCCATTTTCCTTTCTGCTTA+TGG - chr7_3:13581334-13581353 Msa1093570:intron 40.0%
GCCATAAGCAGAAAGGAAAA+TGG + chr7_3:13581338-13581357 None:intergenic 40.0%
GAATGTACATAGTGCACTGT+AGG + chr7_3:13581368-13581387 None:intergenic 40.0%
! AGTCCGTTTTATACAGCTCA+AGG - chr7_3:13581464-13581483 Msa1093570:intron 40.0%
GTGCCTTGAGCTGTATAAAA+CGG + chr7_3:13581470-13581489 None:intergenic 40.0%
ACCTCTTAGTGATATGGTGA+AGG - chr7_3:13581647-13581666 Msa1093570:CDS 40.0%
CAATATGTTTGATCGTGTCG+TGG - chr7_3:13581745-13581764 Msa1093570:intron 40.0%
GCTTCATTATGGTGAGACTA+TGG + chr7_3:13581827-13581846 None:intergenic 40.0%
CGAATGGAGATGAAAAACAG+AGG - chr7_3:13581897-13581916 Msa1093570:CDS 40.0%
TCTTGCTTATCATCAGTGGT+AGG + chr7_3:13581950-13581969 None:intergenic 40.0%
CTCCAACAAAAGGATCAATG+AGG + chr7_3:13582120-13582139 None:intergenic 40.0%
! CTCATTGATCCTTTTGTTGG+AGG - chr7_3:13582118-13582137 Msa1093570:intron 40.0%
TTTCCCAGAGCTATGGAATT+TGG - chr7_3:13582313-13582332 Msa1093570:intron 40.0%
TCTCCAAATTCCATAGCTCT+GGG + chr7_3:13582319-13582338 None:intergenic 40.0%
TTCTCCAAATTCCATAGCTC+TGG + chr7_3:13582320-13582339 None:intergenic 40.0%
TATGTCGGAGTTGTGCATTT+AGG - chr7_3:13582805-13582824 Msa1093570:intron 40.0%
GGGGATAACAGAAAGTAATG+TGG + chr7_3:13582831-13582850 None:intergenic 40.0%
ATTTATTTGGTTGGGAGGAG+AGG + chr7_3:13582886-13582905 None:intergenic 40.0%
GAAGGATTTATTTGGTTGGG+AGG + chr7_3:13582891-13582910 None:intergenic 40.0%
TATAAGCCCAATAGTGAGGA+AGG + chr7_3:13582909-13582928 None:intergenic 40.0%
GTTCTATAAGCCCAATAGTG+AGG + chr7_3:13582913-13582932 None:intergenic 40.0%
! CTTTGTTGGTTACTATGTGG+TGG - chr7_3:13583012-13583031 Msa1093570:intron 40.0%
!!! TGTGGTGGATTTTCTGTTTC+AGG - chr7_3:13583027-13583046 Msa1093570:intron 40.0%
! AGGTTTGGTTCCATTATAGC+AGG - chr7_3:13583047-13583066 Msa1093570:intron 40.0%
! GGTTTGGTTCCATTATAGCA+GGG - chr7_3:13583048-13583067 Msa1093570:intron 40.0%
! GTTTGGTTCCATTATAGCAG+GGG - chr7_3:13583049-13583068 Msa1093570:intron 40.0%
TTGTAAAGCCCCTGCTATAA+TGG + chr7_3:13583060-13583079 None:intergenic 40.0%
GCTTTACAATCCAGCGTATT+TGG - chr7_3:13583071-13583090 Msa1093570:intron 40.0%
!!! GTCCTTTTTTCCAAATACGC+TGG + chr7_3:13583084-13583103 None:intergenic 40.0%
GAAAAGAAAATGAACCACGC+TGG + chr7_3:13583148-13583167 None:intergenic 40.0%
! GCGTGGTTCATTTTCTTTTC+AGG - chr7_3:13583148-13583167 Msa1093570:intron 40.0%
!! GGTTCATTTTCTTTTCAGGG+TGG - chr7_3:13583152-13583171 Msa1093570:intron 40.0%
CTCTAATCAAACACAGGACA+AGG + chr7_3:13583216-13583235 None:intergenic 40.0%
GATACATTGTGCAAAGAGCT+TGG - chr7_3:13583325-13583344 Msa1093570:intron 40.0%
! ACACTAGCTTACAGTCATGA+CGG - chr7_3:13583382-13583401 Msa1093570:intron 40.0%
! AATAGACCAGTTTTGCGATG+GGG + chr7_3:13583413-13583432 None:intergenic 40.0%
! GTAATAGACCAGTTTTGCGA+TGG + chr7_3:13583415-13583434 None:intergenic 40.0%
AAGCAAGTGAACAGAAGTCA+GGG - chr7_3:13583559-13583578 Msa1093570:intron 40.0%
! GGGAAATACCTGACTTGTAA+TGG - chr7_3:13583579-13583598 Msa1093570:intron 40.0%
AGAGTATGCCATTACAAGTC+AGG + chr7_3:13583590-13583609 None:intergenic 40.0%
!!! TGTGTGGGAAGTTTTGAACT+AGG - chr7_3:13583722-13583741 Msa1093570:CDS 40.0%
!! ACTGTTGCTTGCTAGTCTTA+CGG - chr7_3:13583803-13583822 Msa1093570:intron 40.0%
!!! ACTTTTTCGCCGTTTCTGTT+TGG + chr7_3:13584206-13584225 None:intergenic 40.0%
TATTATGCCTTGAGATGGCT+TGG + chr7_3:13584250-13584269 None:intergenic 40.0%
GCAACTATTATGCCTTGAGA+TGG + chr7_3:13584255-13584274 None:intergenic 40.0%
! CTCCCATGTAAACTCTCTTT+TGG + chr7_3:13584535-13584554 None:intergenic 40.0%
! TTTTCACGAAGCACGTTATG+AGG - chr7_3:13584772-13584791 Msa1093570:intron 40.0%
AGACATCCAGATCACGAAAA+AGG - chr7_3:13584908-13584927 Msa1093570:intron 40.0%
GGGAAGAAAATTAAGTGGGA+AGG + chr7_3:13584939-13584958 None:intergenic 40.0%
CCTCGGGAAGAAAATTAAGT+GGG + chr7_3:13584943-13584962 None:intergenic 40.0%
ACCTCGGGAAGAAAATTAAG+TGG + chr7_3:13584944-13584963 None:intergenic 40.0%
ACAGCATTAACACCTATTGC+AGG - chr7_3:13585205-13585224 Msa1093570:intron 40.0%
GTAAATAGGTCACCTGCAAT+AGG + chr7_3:13585220-13585239 None:intergenic 40.0%
GTGGTTATTAAGACTGAGAG+TGG + chr7_3:13585242-13585261 None:intergenic 40.0%
AATGTAAAGAGACCACTGGA+GGG - chr7_3:13585275-13585294 Msa1093570:intron 40.0%
!! GCTTATGGAAGCATTACCAA+GGG + chr7_3:13585348-13585367 None:intergenic 40.0%
GTAATGCTTCCATAAGCCTA+TGG - chr7_3:13585351-13585370 Msa1093570:intron 40.0%
TTTCTTGAGCCATAGGCTTA+TGG + chr7_3:13585363-13585382 None:intergenic 40.0%
GGTATAGAGATGCATATCAC+TGG + chr7_3:13585487-13585506 None:intergenic 40.0%
CATCTCTATACCACCTTCAT+AGG - chr7_3:13585495-13585514 Msa1093570:intron 40.0%
TCTCTATACCACCTTCATAG+GGG - chr7_3:13585497-13585516 Msa1093570:intron 40.0%
GAGTGAAAATTGACAGGCAT+GGG + chr7_3:13585633-13585652 None:intergenic 40.0%
AGAGTGAAAATTGACAGGCA+TGG + chr7_3:13585634-13585653 None:intergenic 40.0%
GGATGAGAGTGAAAATTGAC+AGG + chr7_3:13585639-13585658 None:intergenic 40.0%
GTGACAATAGACTCTCTTGT+TGG - chr7_3:13585747-13585766 Msa1093570:intron 40.0%
GATGACATACTTGACGAATG+TGG + chr7_3:13585901-13585920 None:intergenic 40.0%
ACAATTGCAGCCATTTCTTC+TGG - chr7_3:13585966-13585985 Msa1093570:CDS 40.0%
!! AGCCATTTCTTCTGGAGTAA+AGG - chr7_3:13585974-13585993 Msa1093570:CDS 40.0%
AGCCTTTACTCCAGAAGAAA+TGG + chr7_3:13585979-13585998 None:intergenic 40.0%
CACTCACATTTCAGTGTTCT+CGG - chr7_3:13586154-13586173 Msa1093570:intron 40.0%
!! GGTCCCGCTATTTTGAATAT+GGG - chr7_3:13586198-13586217 Msa1093570:intron 40.0%
GGACCCATATTCAAAATAGC+GGG + chr7_3:13586204-13586223 None:intergenic 40.0%
! GATGTGTTGCTAGCATTTCT+AGG - chr7_3:13586307-13586326 Msa1093570:intron 40.0%
TTCATAATCCTAACCAGGTG+TGG + chr7_3:13586770-13586789 None:intergenic 40.0%
ATGAATTACGAAACGCCCAA+TGG - chr7_3:13586785-13586804 Msa1093570:intron 40.0%
!!! AAACGCCCAATGGTTTTGTA+TGG - chr7_3:13586795-13586814 Msa1093570:intron 40.0%
AACCCAATTTGGATGGTAAG+TGG + chr7_3:13586846-13586865 None:intergenic 40.0%
GGCAATGACGTTCAAAATTG+TGG - chr7_3:13586951-13586970 Msa1093570:intron 40.0%
!! GTCTGAAGCATTGTTTAGGT+AGG + chr7_3:13587267-13587286 None:intergenic 40.0%
AACAATGCTTCAGACAACAG+TGG - chr7_3:13587272-13587291 Msa1093570:intron 40.0%
GAAACCTTCGTACATCTAGA+TGG + chr7_3:13587312-13587331 None:intergenic 40.0%
GGGGGCTTTACATTATTCAA+GGG + chr7_3:13587334-13587353 None:intergenic 40.0%
TGGGGGCTTTACATTATTCA+AGG + chr7_3:13587335-13587354 None:intergenic 40.0%
! AGTATGGTTTAGCTTACGCG+CGG + chr7_3:13577606-13577625 None:intergenic 45.0%
GTGAATGAACTGTGAGAGAG+AGG + chr7_3:13577691-13577710 None:intergenic 45.0%
TTTGTCCTACAAGTTCCGTG+AGG - chr7_3:13578215-13578234 Msa1093570:intron 45.0%
TTGTCCTACAAGTTCCGTGA+GGG - chr7_3:13578216-13578235 Msa1093570:intron 45.0%
AAAACCCTCACGGAACTTGT+AGG + chr7_3:13578223-13578242 None:intergenic 45.0%
AGGGAACTGATTGTATCGTG+TGG - chr7_3:13578279-13578298 Msa1093570:intron 45.0%
TTGTATCGTGTGGCAGATTG+TGG - chr7_3:13578289-13578308 Msa1093570:intron 45.0%
! GTAATCGCATGTGTTGGTGT+CGG - chr7_3:13578540-13578559 Msa1093570:intron 45.0%
GCATACAAACTGATGAGCTG+GGG + chr7_3:13578769-13578788 None:intergenic 45.0%
! TTTGAAGCTGAAGGAAGAGC+TGG - chr7_3:13578995-13579014 Msa1093570:intron 45.0%
!! GGTTTTGACATCCCATAGGT+AGG - chr7_3:13579429-13579448 Msa1093570:intron 45.0%
! GGTTTTTACATCCCACTGGT+AGG - chr7_3:13579511-13579530 Msa1093570:CDS 45.0%
TAGCGCTTATGCTGTGACAA+TGG + chr7_3:13580133-13580152 None:intergenic 45.0%
GAAAAATGGGACACCAGTTC+TGG - chr7_3:13580159-13580178 Msa1093570:intron 45.0%
CTAGCAAGACATACCAGAAC+TGG + chr7_3:13580175-13580194 None:intergenic 45.0%
GATAGGACCCAGTAGATCAT+TGG - chr7_3:13580626-13580645 Msa1093570:intron 45.0%
!! TACCCCAAGTTCTAAGACAC+AGG - chr7_3:13580832-13580851 Msa1093570:intron 45.0%
CTCCTGTGTCTTAGAACTTG+GGG + chr7_3:13580837-13580856 None:intergenic 45.0%
GACTCCTGTGTCTTAGAACT+TGG + chr7_3:13580839-13580858 None:intergenic 45.0%
TGCGATTCACTCAAGGAAGA+TGG - chr7_3:13580864-13580883 Msa1093570:intron 45.0%
AAGGAAAATGGGTGACCTCA+AGG + chr7_3:13581326-13581345 None:intergenic 45.0%
TGGAGGACCTCTTAGTGATA+TGG - chr7_3:13581641-13581660 Msa1093570:CDS 45.0%
GCCTTCACCATATCACTAAG+AGG + chr7_3:13581651-13581670 None:intergenic 45.0%
TGGTGAAGGCAATTGCTAGT+TGG - chr7_3:13581661-13581680 Msa1093570:CDS 45.0%
GAGATGAAAAACAGAGGGAC+TGG - chr7_3:13581903-13581922 Msa1093570:CDS 45.0%
GCACTTGTACCTCCAACAAA+AGG + chr7_3:13582130-13582149 None:intergenic 45.0%
!! TCCATAGCTCTGGGAAAGAA+TGG + chr7_3:13582310-13582329 None:intergenic 45.0%
! ATTTCTAGGGAGACCCTGAT+TGG + chr7_3:13582967-13582986 None:intergenic 45.0%
!!! CGCTGGTGCTTGTTTTTTCT+TGG + chr7_3:13583131-13583150 None:intergenic 45.0%
AGAAAAAACAAGCACCAGCG+TGG - chr7_3:13583131-13583150 Msa1093570:intron 45.0%
GTGCAAAGATTTCCCCTTTG+AGG - chr7_3:13583187-13583206 Msa1093570:intron 45.0%
AGGACAAGGTTTCCTCAAAG+GGG + chr7_3:13583202-13583221 None:intergenic 45.0%
CAGGACAAGGTTTCCTCAAA+GGG + chr7_3:13583203-13583222 None:intergenic 45.0%
ACAGGACAAGGTTTCCTCAA+AGG + chr7_3:13583204-13583223 None:intergenic 45.0%
CAAGCAAGTGAACAGAAGTC+AGG - chr7_3:13583558-13583577 Msa1093570:intron 45.0%
CTTGGAGCAACCCATCATAT+GGG + chr7_3:13583678-13583697 None:intergenic 45.0%
TCTTGGAGCAACCCATCATA+TGG + chr7_3:13583679-13583698 None:intergenic 45.0%
CTCTCGAGTTTGACAACATC+AGG + chr7_3:13583923-13583942 None:intergenic 45.0%
GAAACAACCAAGCCATCTCA+AGG - chr7_3:13584240-13584259 Msa1093570:intron 45.0%
TGTCAACGTTGTATGGCATC+TGG + chr7_3:13584408-13584427 None:intergenic 45.0%
! CTTGGGACCTTTTATGACAC+AGG - chr7_3:13584866-13584885 Msa1093570:CDS 45.0%
AGAGGAGCCTGTGTCATAAA+AGG + chr7_3:13584876-13584895 None:intergenic 45.0%
TTTATGACACAGGCTCCTCT+TGG - chr7_3:13584876-13584895 Msa1093570:CDS 45.0%
ATGTCTCTGACGTTACCAAG+AGG + chr7_3:13584894-13584913 None:intergenic 45.0%
! CCCACTTAATTTTCTTCCCG+AGG - chr7_3:13584940-13584959 Msa1093570:intron 45.0%
GGAGAATGTAAAGAGACCAC+TGG - chr7_3:13585271-13585290 Msa1093570:intron 45.0%
GAATGTAAAGAGACCACTGG+AGG - chr7_3:13585274-13585293 Msa1093570:intron 45.0%
!! GGCTTATGGAAGCATTACCA+AGG + chr7_3:13585349-13585368 None:intergenic 45.0%
CTCTATACCACCTTCATAGG+GGG - chr7_3:13585498-13585517 Msa1093570:intron 45.0%
AGGAATGGCAATGGACACAA+TGG - chr7_3:13585723-13585742 Msa1093570:intron 45.0%
TTCTGACCTGAGAAAGCTGT+TGG - chr7_3:13585860-13585879 Msa1093570:intron 45.0%
TCTGACCTGAGAAAGCTGTT+GGG - chr7_3:13585861-13585880 Msa1093570:intron 45.0%
! CTCCCTGGATTTTTCTATGC+TGG - chr7_3:13586061-13586080 Msa1093570:CDS 45.0%
!! GGGTCCCGCTATTTTGAATA+TGG - chr7_3:13586197-13586216 Msa1093570:intron 45.0%
GGGTCCTACCACTTATGAAT+AGG - chr7_3:13586218-13586237 Msa1093570:intron 45.0%
TGCATTCACAAGTGTACCAG+CGG - chr7_3:13586410-13586429 Msa1093570:intron 45.0%
AGCCACTTGAAGTCAGATGA+GGG - chr7_3:13586461-13586480 Msa1093570:intron 45.0%
TAATCCTAACCAGGTGTGGA+GGG + chr7_3:13586766-13586785 None:intergenic 45.0%
ATAATCCTAACCAGGTGTGG+AGG + chr7_3:13586767-13586786 None:intergenic 45.0%
TTTGTAGGTAACCACAGAGG+TGG - chr7_3:13587185-13587204 Msa1093570:intron 45.0%
!! AGTTGGTAGAGCAATTGCCT+CGG - chr7_3:13587214-13587233 Msa1093570:intron 45.0%
!! TAAAAAATAAAATAAAAAAG+AGG + chr7_3:13577918-13577937 None:intergenic 5.0%
! TATGGTTTAGCTTACGCGCG+GGG + chr7_3:13577604-13577623 None:intergenic 50.0%
! GTATGGTTTAGCTTACGCGC+GGG + chr7_3:13577605-13577624 None:intergenic 50.0%
GCGCGTAAGCTAAACCATAC+TGG - chr7_3:13577605-13577624 Msa1093570:three_prime_UTR 50.0%
GACGGAAGCTGAGTCAGAAA+TGG - chr7_3:13577627-13577646 Msa1093570:three_prime_UTR 50.0%
ATGGCCTCCTCTGCAAAAGA+TGG - chr7_3:13577646-13577665 Msa1093570:three_prime_UTR 50.0%
! AGAGTTGCTGTTGTTGGTGC+TGG - chr7_3:13577849-13577868 Msa1093570:intron 50.0%
!! CTGTTGTTGGTGCTGGTGTA+AGG - chr7_3:13577856-13577875 Msa1093570:intron 50.0%
!! GTTGGTGCTGGTGTAAGGTA+CGG - chr7_3:13577861-13577880 Msa1093570:intron 50.0%
! GGCCGAATTATGGTTAGCCA+CGG - chr7_3:13577968-13577987 Msa1093570:intron 50.0%
! CATGTGTTGGTGTCTGACAC+CGG - chr7_3:13578025-13578044 Msa1093570:intron 50.0%
TCTCAGGTTACTGCCGATGT+TGG + chr7_3:13578503-13578522 None:intergenic 50.0%
TACAAACTGATGAGCTGGGG+AGG + chr7_3:13578766-13578785 None:intergenic 50.0%
AAGCTGAAGGAAGAGCTGGA+GGG - chr7_3:13578999-13579018 Msa1093570:intron 50.0%
!! TTTCTCGAGATGGGCTAGTC+TGG - chr7_3:13579035-13579054 Msa1093570:intron 50.0%
!! TTCTCGAGATGGGCTAGTCT+GGG - chr7_3:13579036-13579055 Msa1093570:intron 50.0%
GGACGAGGGAGCTAATACAA+TGG - chr7_3:13579057-13579076 Msa1093570:intron 50.0%
CTCACTCTTAGCCTACCAGT+GGG + chr7_3:13579525-13579544 None:intergenic 50.0%
ACTCACTCTTAGCCTACCAG+TGG + chr7_3:13579526-13579545 None:intergenic 50.0%
AGTAGTGCAGCAGGATTTGC+AGG + chr7_3:13580329-13580348 None:intergenic 50.0%
TTGCTCTTCAGTAGTGCAGC+AGG + chr7_3:13580338-13580357 None:intergenic 50.0%
GTGGTAACTGTCAGACCGAT+AGG - chr7_3:13580609-13580628 Msa1093570:intron 50.0%
AACCTCAAGAGCTAGCTCGA+GGG + chr7_3:13580795-13580814 None:intergenic 50.0%
AAACCTCAAGAGCTAGCTCG+AGG + chr7_3:13580796-13580815 None:intergenic 50.0%
!! CGAACGCCATTTTGGGAAAG+AGG - chr7_3:13581286-13581305 Msa1093570:intron 50.0%
GCCATTCTTTCCCAGAGCTA+TGG - chr7_3:13582306-13582325 Msa1093570:intron 50.0%
GTGTACTTAGCCGCATGATC+TGG - chr7_3:13582742-13582761 Msa1093570:intron 50.0%
TTCGTGCTCACCAGATCATG+CGG + chr7_3:13582755-13582774 None:intergenic 50.0%
TTTGGTTGGGAGGAGAGGTA+GGG + chr7_3:13582881-13582900 None:intergenic 50.0%
ATTTGGTTGGGAGGAGAGGT+AGG + chr7_3:13582882-13582901 None:intergenic 50.0%
!! TTCTTTTCAGGGTGGGATGC+AGG - chr7_3:13583160-13583179 Msa1093570:intron 50.0%
GTATCAGTCAGTGTCTGTGC+TGG + chr7_3:13583310-13583329 None:intergenic 50.0%
GAAGTTCCCCATCGCAAAAC+TGG - chr7_3:13583404-13583423 Msa1093570:intron 50.0%
GTTGTCAAACTCGAGAGTCC+AGG - chr7_3:13583926-13583945 Msa1093570:CDS 50.0%
AAGGCTCTTGAGAGTTGACC+TGG + chr7_3:13583947-13583966 None:intergenic 50.0%
!! GGGGTTCCTTTTTCGTGATC+TGG + chr7_3:13584917-13584936 None:intergenic 50.0%
TTGCACCATCACTGTTCGCT+TGG - chr7_3:13585052-13585071 Msa1093570:intron 50.0%
CCTTACCAAGCGAACAGTGA+TGG + chr7_3:13585060-13585079 None:intergenic 50.0%
CCATCACTGTTCGCTTGGTA+AGG - chr7_3:13585057-13585076 Msa1093570:intron 50.0%
! AAGAGACCACTGGAGGGTTT+TGG - chr7_3:13585281-13585300 Msa1093570:intron 50.0%
AGAACTCCAAAACCCTCCAG+TGG + chr7_3:13585290-13585309 None:intergenic 50.0%
ATATCACTGGGTGCTCGATC+TGG + chr7_3:13585474-13585493 None:intergenic 50.0%
GTTTCGTGTTCCCCCTATGA+AGG + chr7_3:13585511-13585530 None:intergenic 50.0%
TCATAGGGGGAACACGAAAC+AGG - chr7_3:13585511-13585530 Msa1093570:intron 50.0%
CATAGGGGGAACACGAAACA+GGG - chr7_3:13585512-13585531 Msa1093570:intron 50.0%
GAGCCACTTGAAGTCAGATG+AGG - chr7_3:13586460-13586479 Msa1093570:intron 50.0%
TGCCCTCATCTGACTTCAAG+TGG + chr7_3:13586466-13586485 None:intergenic 50.0%
! TGAAGTCAGATGAGGGCATG+AGG - chr7_3:13586468-13586487 Msa1093570:intron 50.0%
! GTTGGTAGAGCAATTGCCTC+GGG - chr7_3:13587215-13587234 Msa1093570:intron 50.0%
! ATGGTTTAGCTTACGCGCGG+GGG + chr7_3:13577603-13577622 None:intergenic 55.0%
GACTCAGCTTCCGTCCAGTA+TGG + chr7_3:13577622-13577641 None:intergenic 55.0%
! CCTCGTGTTAAGGGCGTGTT+TGG + chr7_3:13578194-13578213 None:intergenic 55.0%
CCAAACACGCCCTTAACACG+AGG - chr7_3:13578191-13578210 Msa1093570:intron 55.0%
AGGAAGGGGGCTGTCAATAG+GGG + chr7_3:13578664-13578683 None:intergenic 55.0%
GAGGAAGGGGGCTGTCAATA+GGG + chr7_3:13578665-13578684 None:intergenic 55.0%
AGAGGAAGGGGGCTGTCAAT+AGG + chr7_3:13578666-13578685 None:intergenic 55.0%
GAAGCTGAAGGAAGAGCTGG+AGG - chr7_3:13578998-13579017 Msa1093570:intron 55.0%
ACCTCAAGAGCTAGCTCGAG+GGG + chr7_3:13580794-13580813 None:intergenic 55.0%
! GTTGGAGGTACAAGTGCTGC+AGG - chr7_3:13582133-13582152 Msa1093570:intron 55.0%
TCGTGTTCCCCCTATGAAGG+TGG + chr7_3:13585508-13585527 None:intergenic 55.0%
CCTGAGAAAGCTGTTGGGAG+CGG - chr7_3:13585866-13585885 Msa1093570:intron 55.0%
AGAAAGCTGTTGGGAGCGGA+GGG - chr7_3:13585870-13585889 Msa1093570:intron 55.0%
GTTAACTTAGACGGAGCCGC+TGG + chr7_3:13586429-13586448 None:intergenic 55.0%
CAACTGAGAGTCCACCTCTG+TGG + chr7_3:13587199-13587218 None:intergenic 55.0%
! CACAGAGGTGGACTCTCAGT+TGG - chr7_3:13587197-13587216 Msa1093570:intron 55.0%
! ATCAGCTGCTTTGCAACCCG+AGG + chr7_3:13587234-13587253 None:intergenic 55.0%
GGGGCTGTCAATAGGGGATG+GGG + chr7_3:13578658-13578677 None:intergenic 60.0%
GGGGGCTGTCAATAGGGGAT+GGG + chr7_3:13578659-13578678 None:intergenic 60.0%
AGGGGGCTGTCAATAGGGGA+TGG + chr7_3:13578660-13578679 None:intergenic 60.0%
CTGAAGGAAGAGCTGGAGGG+AGG - chr7_3:13579002-13579021 Msa1093570:intron 60.0%
!! AGATGGGCTAGTCTGGGACG+AGG - chr7_3:13579042-13579061 Msa1093570:intron 60.0%
!! GATGGGCTAGTCTGGGACGA+GGG - chr7_3:13579043-13579062 Msa1093570:intron 60.0%
CAAGAGCTAGCTCGAGGGGA+GGG + chr7_3:13580790-13580809 None:intergenic 60.0%
TCAAGAGCTAGCTCGAGGGG+AGG + chr7_3:13580791-13580810 None:intergenic 60.0%
! TCCCCTCGAGCTAGCTCTTG+AGG - chr7_3:13580790-13580809 Msa1093570:intron 60.0%
CCGCTCCCAACAGCTTTCTC+AGG + chr7_3:13585869-13585888 None:intergenic 60.0%
GAGAAAGCTGTTGGGAGCGG+AGG - chr7_3:13585869-13585888 Msa1093570:intron 60.0%
GAAAGCTGTTGGGAGCGGAG+GGG - chr7_3:13585871-13585890 Msa1093570:intron 60.0%
AAAGCTGTTGGGAGCGGAGG+GGG - chr7_3:13585872-13585891 Msa1093570:intron 60.0%
! CTTTTCCTGCCCTCCACACC+TGG - chr7_3:13586754-13586773 Msa1093570:intron 60.0%
! GGTGTCAAGTGGGCTTGCCG+CGG - chr7_3:13578934-13578953 Msa1093570:intron 65.0%
CCTAACCAGGTGTGGAGGGC+AGG + chr7_3:13586762-13586781 None:intergenic 65.0%
CCTGCCCTCCACACCTGGTT+AGG - chr7_3:13586759-13586778 Msa1093570:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 13577577 13587451 13577577 ID=Msa1093570;Name=Msa1093570
chr7_3 mRNA 13577577 13587451 13577577 ID=Msa1093570-mRNA-1;Parent=Msa1093570;Name=Msa1093570-mRNA-1;_AED=0.15;_eAED=0.15;_QI=69|0.87|0.94|1|1|1|17|150|448
chr7_3 exon 13577577 13577836 13577577 ID=Msa1093570-mRNA-1:exon:3248;Parent=Msa1093570-mRNA-1
chr7_3 exon 13579018 13579052 13579018 ID=Msa1093570-mRNA-1:exon:3247;Parent=Msa1093570-mRNA-1
chr7_3 exon 13579118 13579192 13579118 ID=Msa1093570-mRNA-1:exon:3246;Parent=Msa1093570-mRNA-1
chr7_3 exon 13579475 13579583 13579475 ID=Msa1093570-mRNA-1:exon:3245;Parent=Msa1093570-mRNA-1
chr7_3 exon 13579678 13579801 13579678 ID=Msa1093570-mRNA-1:exon:3244;Parent=Msa1093570-mRNA-1
chr7_3 exon 13581545 13581712 13581545 ID=Msa1093570-mRNA-1:exon:3243;Parent=Msa1093570-mRNA-1
chr7_3 exon 13581847 13581979 13581847 ID=Msa1093570-mRNA-1:exon:3242;Parent=Msa1093570-mRNA-1
chr7_3 exon 13582686 13582726 13582686 ID=Msa1093570-mRNA-1:exon:3241;Parent=Msa1093570-mRNA-1
chr7_3 exon 13582857 13582922 13582857 ID=Msa1093570-mRNA-1:exon:3240;Parent=Msa1093570-mRNA-1
chr7_3 exon 13583721 13583757 13583721 ID=Msa1093570-mRNA-1:exon:3239;Parent=Msa1093570-mRNA-1
chr7_3 exon 13583872 13583948 13583872 ID=Msa1093570-mRNA-1:exon:3238;Parent=Msa1093570-mRNA-1
chr7_3 exon 13584649 13584705 13584649 ID=Msa1093570-mRNA-1:exon:3237;Parent=Msa1093570-mRNA-1
chr7_3 exon 13584848 13584898 13584848 ID=Msa1093570-mRNA-1:exon:3236;Parent=Msa1093570-mRNA-1
chr7_3 exon 13585156 13585221 13585156 ID=Msa1093570-mRNA-1:exon:3235;Parent=Msa1093570-mRNA-1
chr7_3 exon 13585950 13586085 13585950 ID=Msa1093570-mRNA-1:exon:3234;Parent=Msa1093570-mRNA-1
chr7_3 exon 13587151 13587190 13587151 ID=Msa1093570-mRNA-1:exon:3233;Parent=Msa1093570-mRNA-1
chr7_3 exon 13587361 13587451 13587361 ID=Msa1093570-mRNA-1:exon:3232;Parent=Msa1093570-mRNA-1
chr7_3 five_prime_UTR 13587383 13587451 13587383 ID=Msa1093570-mRNA-1:five_prime_utr;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13587361 13587382 13587361 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13587151 13587190 13587151 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13585950 13586085 13585950 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13585156 13585221 13585156 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13584848 13584898 13584848 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13584649 13584705 13584649 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13583872 13583948 13583872 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13583721 13583757 13583721 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13582857 13582922 13582857 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13582686 13582726 13582686 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13581847 13581979 13581847 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13581545 13581712 13581545 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13579678 13579801 13579678 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13579475 13579583 13579475 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13579118 13579192 13579118 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13579018 13579052 13579018 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 CDS 13577727 13577836 13577727 ID=Msa1093570-mRNA-1:cds;Parent=Msa1093570-mRNA-1
chr7_3 three_prime_UTR 13577577 13577726 13577577 ID=Msa1093570-mRNA-1:three_prime_utr;Parent=Msa1093570-mRNA-1
Gene Sequence

>Msa1093570

ATGGCCTCCTCTGCAAAAGATGGATCTGTTAAAAGAGTTGCTGTTGTTGGTGCTGGTGTAAGTGGGCTTGCCGCGGCTTACAAACTGAAATCACATGGTCTAGATGTAACTGTATTTGAAGCTGAAGGAAGAGCTGGAGGGAGGCTAAGAACTGTTTCTCGAGATGGGCTAGTCTGGGACGAGGGAGCTAATACAATGACTGAAAATGAAATAGAGGTTAAAGGTTTGATTGATGCTCTTGGACTTCGTGAAAAACAACAATATCCATTGTCACAGCATAAGCGCTATATTGTGAAAAATGGGACACCAGTTCTGGTACCTGCAAATCCTGCTGCACTACTGAAGAGCAAACTTCTTTCTGCACAATCAAAGATTCAGGTCATTTTTGAACCATTTATGTGGAAAAGAAGTGACTCATCTGCCGTGTCTGATGAAAATTCTGAAGAAAGTGTTAGTAGATTCTTCGAACGCCATTTTGGGAAAGAGGTCGTGGACTACCTCATTGATCCTTTTGTTGGAGGTACAAGTGCTGCAGGCCCTGAATCTCTTTCTATGTGCCATTCTTTCCCAGAGCTATGGAATTTGGAGAAAAGGTTTGGTTCCATTATAGCAGGGGCTTTACAATCCAGCGTATTTGGAAAAAAGGACAAAGCTGGAGAAACTAAAGATGTACCAAGAAAAAACAAGCACCAGCGTGGTTCATTTTCTTTTCAGGGTGGGATGCAGACACTGACTGATACATTGTGCAAAGAGCTTGGCAAAGATGACATTAAATTAAATGCGAAGGTTCTGACACTAGCTTACAGTCATGACGGAAGTTCCCCATCGCAAAACTGGTCTATTACTTGTGCTTCTAACCGAAAAACACAAGATGTTGATGCAGTAATTATGACGGTGACCTATTTACCACTCTCAGTCTTAATAACCACCTTTAAAAAGGAGAATGTAAAGAGACCACTGGAGGGTTTTGGAGTTCTTGTTCCTTCAAAAGAGCAACAAAATGGTTTTAAAACCCTTGGTACACTTTTTTCTTCTATGATGTTTCCAGATCGAGCACCCAGTGATATGCATCTCTATACCACCTTCATAGGGGGAACACGAAACAGGGAACTTGCTCAAGCTTCAACTGACGAGCTTAAGAAAATTGTAACTTCTGACCTGAGAAAGCTGTTGGGAGCGGAGGGGGAGCCCACATTCGTCAACCATTTCTTCTGGAGTAAAGGCTTTCCTTTATATGGTAACCACAGAGGTGGACTCTCAGTTGGTAGAGCAATTGCCTCGGGTTGCAAAGCAGCTGATCTTGTAATTTCCTACCTAAACAATGCTTCAGACAACAGTGGTGTCTGA

Protein sequence

>Msa1093570

MASSAKDGSVKRVAVVGAGVSGLAAAYKLKSHGLDVTVFEAEGRAGGRLRTVSRDGLVWDEGANTMTENEIEVKGLIDALGLREKQQYPLSQHKRYIVKNGTPVLVPANPAALLKSKLLSAQSKIQVIFEPFMWKRSDSSAVSDENSEESVSRFFERHFGKEVVDYLIDPFVGGTSAAGPESLSMCHSFPELWNLEKRFGSIIAGALQSSVFGKKDKAGETKDVPRKNKHQRGSFSFQGGMQTLTDTLCKELGKDDIKLNAKVLTLAYSHDGSSPSQNWSITCASNRKTQDVDAVIMTVTYLPLSVLITTFKKENVKRPLEGFGVLVPSKEQQNGFKTLGTLFSSMMFPDRAPSDMHLYTTFIGGTRNRELAQASTDELKKIVTSDLRKLLGAEGEPTFVNHFFWSKGFPLYGNHRGGLSVGRAIASGCKAADLVISYLNNASDNSGV*