AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0060250


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0060250 MtrunA17_Chr1g0159811 92.086 417 21 1 75 479 6 422 0.0 790
Msa0060250 MtrunA17_Chr1g0159811 40.777 103 59 2 1 103 1 101 1.62e-13 73.2
Msa0060250 MtrunA17_Chr3g0124811 76.091 481 103 1 75 543 8 488 0.0 781
Msa0060250 MtrunA17_Chr3g0124811 44.792 96 51 2 8 103 10 103 1.74e-17 85.5
Msa0060250 MtrunA17_Chr8g0384741 63.911 496 161 3 61 543 49 539 0.0 665
Msa0060250 MtrunA17_Chr8g0384741 50.000 68 34 0 8 75 61 128 2.38e-15 79.0
Msa0060250 MtrunA17_Chr8g0372381 48.780 451 219 1 89 527 13 463 1.15e-156 456
Msa0060250 MtrunA17_Chr2g0328781 45.511 479 246 2 80 543 15 493 1.18e-146 431
Msa0060250 MtrunA17_Chr4g0032441 50.000 454 212 2 89 527 9 462 7.15e-143 421
Msa0060250 MtrunA17_Chr3g0129271 48.677 189 94 1 240 425 31 219 2.96e-57 192
Msa0060250 MtrunA17_Chr1g0159821 92.405 79 6 0 1 79 1 79 5.66e-42 147
Msa0060250 MtrunA17_Chr1g0159821 49.275 69 35 0 77 145 8 76 1.77e-14 70.5
Msa0060250 MtrunA17_Chr2g0294411 25.111 450 293 11 103 523 106 540 1.91e-33 134
Msa0060250 MtrunA17_Chr4g0059521 28.255 361 232 9 164 502 130 485 1.13e-32 131
Msa0060250 MtrunA17_Chr3g0118121 28.809 361 230 8 164 502 130 485 2.35e-32 130
Msa0060250 MtrunA17_Chr3g0118081 28.198 344 220 8 181 502 177 515 7.46e-32 129
Msa0060250 MtrunA17_Chr2g0310091 25.837 418 279 11 107 503 123 530 2.38e-31 127
Msa0060250 MtrunA17_Chr4g0059221 28.571 343 223 8 180 503 196 535 6.49e-28 117
Msa0060250 MtrunA17_Chr8g0365221 28.448 348 225 10 176 503 189 532 2.52e-26 112
Msa0060250 MtrunA17_Chr3g0117861 28.863 343 222 9 180 503 194 533 3.70e-26 112
Msa0060250 MtrunA17_Chr8g0390631 27.456 397 242 16 142 503 100 485 4.75e-25 108
Msa0060250 MtrunA17_Chr8g0390651 28.530 347 210 13 184 503 159 494 9.53e-25 107
Msa0060250 MtrunA17_Chr6g0485301 27.714 350 219 12 179 503 153 493 1.11e-24 107
Msa0060250 MtrunA17_Chr4g0009161 46.789 109 54 2 240 344 116 224 1.48e-24 102
Msa0060250 MtrunA17_Chr6g0485311 27.041 392 240 16 146 502 110 490 9.22e-21 95.5
Msa0060250 MtrunA17_Chr4g0074171 24.775 444 285 13 76 486 41 468 2.33e-20 94.4
Msa0060250 MtrunA17_Chr2g0279751 25.455 440 265 18 106 502 68 487 9.11e-18 86.3
Msa0060250 MtrunA17_Chr1g0149961 23.918 439 295 12 76 486 41 468 1.15e-16 82.8
Msa0060250 MtrunA17_Chr4g0049641 24.928 349 226 11 182 502 174 514 1.17e-15 80.1
Msa0060250 MtrunA17_Chr2g0300801 22.807 342 236 7 182 499 152 489 5.03e-15 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0060250 AT1G44170.1 68.058 479 141 1 77 543 4 482 0.0 703
Msa0060250 AT1G44170.1 55.882 68 30 0 8 75 4 71 4.12e-14 75.5
Msa0060250 AT1G44170.2 68.058 479 141 1 77 543 4 482 0.0 703
Msa0060250 AT1G44170.2 55.882 68 30 0 8 75 4 71 4.12e-14 75.5
Msa0060250 AT1G44170.3 71.290 411 106 1 145 543 9 419 0.0 635
Msa0060250 AT4G34240.1 63.354 483 165 1 73 543 63 545 0.0 632
Msa0060250 AT4G34240.4 63.354 483 165 1 73 543 48 530 0.0 631
Msa0060250 AT4G34240.3 68.080 401 116 1 155 543 3 403 0.0 559
Msa0060250 AT4G36250.1 44.894 470 244 2 89 543 12 481 3.28e-152 445
Msa0060250 AT4G34240.2 62.121 330 113 1 71 388 61 390 3.43e-141 414
Msa0060250 AT4G34240.2 48.529 68 35 0 11 78 70 137 2.26e-13 72.4
Msa0060250 AT3G66658.1 27.064 436 280 10 103 508 106 533 3.55e-36 142
Msa0060250 AT3G66658.2 26.360 478 305 11 103 541 106 575 4.97e-36 142
Msa0060250 AT1G74920.2 28.689 366 233 10 164 506 125 485 2.20e-34 136
Msa0060250 AT1G74920.1 28.689 366 233 10 164 506 130 490 3.58e-34 135
Msa0060250 AT1G23800.1 27.640 445 292 12 81 503 89 525 1.61e-32 131
Msa0060250 AT1G79440.1 29.532 342 218 10 181 503 184 521 8.53e-32 129
Msa0060250 AT3G48170.1 27.326 344 223 8 181 502 147 485 1.32e-29 122
Msa0060250 AT3G48000.1 26.549 452 288 15 81 503 93 529 4.94e-25 109
Msa0060250 AT3G24503.1 25.948 343 228 10 182 503 155 492 1.12e-22 102
Msa0060250 AT1G54100.2 21.893 338 238 6 185 499 154 488 2.80e-18 88.6
Msa0060250 AT1G54100.1 21.893 338 238 6 185 499 154 488 2.80e-18 88.6
Msa0060250 AT2G24270.2 26.250 320 209 9 185 486 198 508 3.18e-17 85.1
Msa0060250 AT2G24270.4 24.586 423 282 13 89 486 58 468 5.76e-17 84.3
Msa0060250 AT2G24270.3 26.250 320 209 9 185 486 158 468 6.24e-17 84.3
Msa0060250 AT2G24270.1 26.250 320 209 9 185 486 158 468 6.24e-17 84.3
Msa0060250 AT2G14170.2 25.130 386 242 16 147 502 109 477 1.71e-15 79.7
Msa0060250 AT2G14170.1 25.130 386 242 16 147 502 218 586 1.88e-15 79.7
Msa0060250 AT2G14170.3 25.217 345 214 14 147 463 218 546 7.50e-14 74.7
Msa0060250 AT1G23800.2 27.843 255 159 8 81 316 89 337 1.55e-13 73.2

Find 94 sgRNAs with CRISPR-Local

Find 688 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTATAATTCGTGCCTTATT+TGG 0.140278 1_2:-17899584 Msa0060250:CDS
TTGGATGACGACAAAGTTTC+TGG 0.175918 1_2:-17900866 Msa0060250:CDS
TTCTCAGTTGAAGGCACTTC+TGG 0.189731 1_2:-17909951 Msa0060250:CDS
CGATCGCTTGATAAAGCTTT+TGG 0.222465 1_2:-17900885 Msa0060250:CDS
GCAATTCATACTTTGCCTTT+TGG 0.268675 1_2:-17899782 Msa0060250:CDS
ATTCTAGGACTTTCCAAATA+AGG 0.270067 1_2:+17899571 None:intergenic
TGATTCAAATATCAACTTAC+AGG 0.279419 1_2:-17901416 Msa0060250:intron
TTGAGAATAACGTTTGATTC+TGG 0.302281 1_2:-17910001 Msa0060250:CDS
TTTGTTGTTATGATATAATC+TGG 0.316109 1_2:+17901103 None:intergenic
GATTAGCCCTACTGTTCTAT+TGG 0.328993 1_2:-17900696 Msa0060250:CDS
AGCTTTGATGTGATAAATTC+AGG 0.353189 1_2:-17900259 Msa0060250:CDS
GACTGTTTCTGCTGGTGGTT+TGG 0.353589 1_2:-17900173 Msa0060250:CDS
CATCAATCTCATCTTTGTAT+TGG 0.356661 1_2:+17899634 None:intergenic
TCCAGCCACATCATCGTTGC+TGG 0.362338 1_2:-17901923 Msa0060250:CDS
GTTTCTGGTAAGATTGTTCA+TGG 0.366193 1_2:-17900851 Msa0060250:CDS
CCTCCAAGCTCCAGCACAAC+TGG 0.367836 1_2:+17901457 None:intergenic
CTGAGACAAACATTTGGTTC+TGG 0.403023 1_2:-17905363 Msa0060250:CDS
CTCATCTTTGTATTGGTGTA+TGG 0.403429 1_2:+17899641 None:intergenic
ACACCAGTTGTGCTGGAGCT+TGG 0.416382 1_2:-17901460 Msa0060250:CDS
ATATTTGAATCAACAACAAC+TGG 0.421798 1_2:+17901427 None:intergenic
CTTAATTCATACCGTGATGA+TGG 0.425207 1_2:+17900619 None:intergenic
AGATAATAACCGAACCTCAT+AGG 0.441099 1_2:+17905212 None:intergenic
ATAATGAGCGAAGAGATATT+TGG 0.444128 1_2:-17900653 Msa0060250:CDS
ATGGAAAGTTTCTCAGTTGA+AGG 0.449116 1_2:-17909960 Msa0060250:CDS
TCGTTGCTGGCAAAACTGTT+AGG 0.451153 1_2:-17901910 Msa0060250:CDS
TTTGTTAAGACTGTTTCTGC+TGG 0.453254 1_2:-17900181 Msa0060250:CDS
GATTGTTCATGGAGGTGAAA+AGG 0.454910 1_2:-17900840 Msa0060250:CDS
GATACTATTTCAGCTGAAGA+AGG 0.460660 1_2:+17902382 None:intergenic
GCATTGGATGGCTCCGGAAA+AGG 0.463175 1_2:-17902528 Msa0060250:intron
ATTGCAAGGTGGCAACTAGA+AGG 0.464455 1_2:-17901174 Msa0060250:intron
GGAGTAGGTGAGAGTGGAGT+GGG 0.469025 1_2:-17899758 Msa0060250:CDS
CTGTATTACTGCAACAAAAG+TGG 0.474056 1_2:-17901831 Msa0060250:CDS
ATATATGCAGCAAGAGGCTT+CGG 0.476234 1_2:+17900235 None:intergenic
AATGAACTGAGACAAACATT+TGG 0.478069 1_2:-17905369 Msa0060250:CDS
GCACCTTACACCAGTTGTGC+TGG 0.485174 1_2:-17901467 Msa0060250:CDS
ATTGAGTACCTCTTGGATGA+AGG 0.488247 1_2:+17909856 None:intergenic
GTTAAGACTGTTTCTGCTGG+TGG 0.490673 1_2:-17900178 Msa0060250:CDS
CTCATCTATAAGAGTTGTTG+AGG 0.493781 1_2:-17901872 Msa0060250:CDS
CCAGTTGTGCTGGAGCTTGG+AGG 0.497518 1_2:-17901457 Msa0060250:CDS
CACTCAAGGAATTGAAGCAT+TGG 0.498600 1_2:-17902544 Msa0060250:CDS
GAAGGATAATCGCTGGAAAG+TGG 0.505649 1_2:-17901156 Msa0060250:CDS
CTCATGTAAAACTGCACTCA+AGG 0.507865 1_2:-17902558 Msa0060250:CDS
GAGATTGATGAAGGCTCTCA+TGG 0.510072 1_2:-17899621 Msa0060250:CDS
GCTCCAGCACAACTGGTGTA+AGG 0.510660 1_2:+17901464 None:intergenic
GGAAAGTGGGGTTGCAACAA+TGG 0.510938 1_2:-17901142 Msa0060250:CDS
TACAAAGATGAGATTGATGA+AGG 0.513208 1_2:-17899630 Msa0060250:CDS
AAGAGTGGCACGCATTGTTA+TGG 0.524412 1_2:-17901503 Msa0060250:CDS
AAGGATAATCGCTGGAAAGT+GGG 0.525366 1_2:-17901155 Msa0060250:CDS
ATTGAAGCATTGGATGGCTC+CGG 0.525858 1_2:-17902534 Msa0060250:CDS
AAAAGACTATGCTCCTAAGT+TGG 0.527792 1_2:-17901083 Msa0060250:intron
CAATGAAGCGGGATCCATGC+TGG 0.534188 1_2:-17905394 Msa0060250:CDS
ATGAAGGCTCTCATGGGTGG+TGG 0.534832 1_2:-17899614 Msa0060250:CDS
GCCAGCAACGATGATGTGGC+TGG 0.536814 1_2:+17901922 None:intergenic
TTTGGAGGAGTAGGTGAGAG+TGG 0.537231 1_2:-17899764 Msa0060250:CDS
GGGACATCCAATAGAACAGT+AGG 0.538615 1_2:+17900689 None:intergenic
TCTCAGTTCATTCACCAGCA+TGG 0.539045 1_2:+17905380 None:intergenic
CTCTCACCTACTCCTCCAAA+AGG 0.540508 1_2:+17899767 None:intergenic
TCTTGAAACTGTCGCCTATG+AGG 0.543885 1_2:-17905226 Msa0060250:intron
AATATGTTCGACAATGAAGC+GGG 0.550123 1_2:-17905405 Msa0060250:CDS
ATCTTTGTATTGGTGTATGG+TGG 0.551950 1_2:+17899644 None:intergenic
TCATCTATAAGAGTTGTTGA+GGG 0.559074 1_2:-17901871 Msa0060250:CDS
AGGAGTAGGTGAGAGTGGAG+TGG 0.559793 1_2:-17899759 Msa0060250:CDS
ACCGTGATGATGGGAAGTAA+TGG 0.565095 1_2:+17900629 None:intergenic
TGTATTACTGCAACAAAAGT+GGG 0.565567 1_2:-17901830 Msa0060250:CDS
GCAACTAGAAGGATAATCGC+TGG 0.565895 1_2:-17901163 Msa0060250:CDS
GTAAATATATATGCAGCAAG+AGG 0.571237 1_2:+17900229 None:intergenic
TTAATTCATACCGTGATGAT+GGG 0.573561 1_2:+17900620 None:intergenic
GTAAGACTCGAAGCTACGAA+TGG 0.580175 1_2:-17909979 Msa0060250:CDS
CAAGGAATTGAAGCATTGGA+TGG 0.593249 1_2:-17902540 Msa0060250:CDS
CATAGGCGACAGTTTCAAGA+GGG 0.597623 1_2:+17905229 None:intergenic
TAGGCGACAGTTTCAAGAGG+GGG 0.599399 1_2:+17905231 None:intergenic
GATAACAGCAACATACTCTA+CGG 0.606094 1_2:+17910312 None:intergenic
AGGATAATCGCTGGAAAGTG+GGG 0.609873 1_2:-17901154 Msa0060250:CDS
GTGGCTGGAGAAATTTCTGA+TGG 0.612827 1_2:+17901937 None:intergenic
TCCATTACTTCCCATCATCA+CGG 0.618602 1_2:-17900630 Msa0060250:intron
GAATATGTTCGACAATGAAG+CGG 0.619480 1_2:-17905406 Msa0060250:CDS
TAGCATAGCTTAGCTAAACA+TGG 0.619525 1_2:-17910086 Msa0060250:exon
TATTGCAGCTGGTAATGCTG+TGG 0.620073 1_2:-17901968 Msa0060250:intron
AAAACTGTTAGGAGAATACA+TGG 0.624224 1_2:-17901899 Msa0060250:CDS
AGCTGAATCCTTCATCCAAG+AGG 0.631889 1_2:-17909864 Msa0060250:intron
TACAAACGACAAGAAGCTCA+AGG 0.637163 1_2:-17900209 Msa0060250:CDS
GAAATAGTATCTGAACCACT+TGG 0.643478 1_2:-17902370 Msa0060250:CDS
AGTGGAGTGGGTGCATACCA+TGG 0.646385 1_2:-17899746 Msa0060250:CDS
GGACATCCAATAGAACAGTA+GGG 0.647357 1_2:+17900690 None:intergenic
ATGATCAACACAACTCCAAG+TGG 0.650557 1_2:+17902355 None:intergenic
GCTTTATCAAGCGATCGAAG+TGG 0.653845 1_2:+17900891 None:intergenic
TTGTGTTGATCATCTCTGCA+TGG 0.653993 1_2:-17902345 Msa0060250:CDS
AGATTGATGAAGGCTCTCAT+GGG 0.665748 1_2:-17899620 Msa0060250:CDS
TCATAGGCGACAGTTTCAAG+AGG 0.669261 1_2:+17905228 None:intergenic
CTCATTATCAGAGAATCACG+CGG 0.673973 1_2:+17900668 None:intergenic
TTGATGAAGGCTCTCATGGG+TGG 0.678752 1_2:-17899617 Msa0060250:CDS
TCTGGTAAGATTGTTCATGG+AGG 0.703693 1_2:-17900848 Msa0060250:CDS
ATAGGCGACAGTTTCAAGAG+GGG 0.706757 1_2:+17905230 None:intergenic
TCATTATCAGAGAATCACGC+GGG 0.717383 1_2:+17900669 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATGTTATTTTGTTTTTT+AGG + chr1_2:17899498-17899517 None:intergenic 10.0%
!! AAACTAAAAACAATTAAATT+TGG - chr1_2:17900282-17900301 Msa0060250:intron 10.0%
!! AACTAAAAACAATTAAATTT+GGG - chr1_2:17900283-17900302 Msa0060250:intron 10.0%
!!! TTTTGTAATTTAAATTCATT+CGG - chr1_2:17901801-17901820 Msa0060250:intron 10.0%
!!! AAAAAAAATCAATTATTTCT+TGG + chr1_2:17902142-17902161 None:intergenic 10.0%
!!! TTTTTTTTTAGATATATTGA+AGG - chr1_2:17902154-17902173 Msa0060250:intron 10.0%
!!! TTTTTTTTAGATATATTGAA+GGG - chr1_2:17902155-17902174 Msa0060250:intron 10.0%
!! TACATAAATTATTCAATATA+GGG + chr1_2:17902460-17902479 None:intergenic 10.0%
!! ATACATAAATTATTCAATAT+AGG + chr1_2:17902461-17902480 None:intergenic 10.0%
!! CATAAAGTAATAAATTATTA+AGG - chr1_2:17902659-17902678 Msa0060250:intron 10.0%
!!! AAATTTATAAATCATTTTGA+GGG + chr1_2:17902756-17902775 None:intergenic 10.0%
!!! AAAATTTATAAATCATTTTG+AGG + chr1_2:17902757-17902776 None:intergenic 10.0%
!!! AATCAAAAGAATTATTTTTA+AGG + chr1_2:17903260-17903279 None:intergenic 10.0%
!!! AAAAAGTATTTTATCATTTA+TGG + chr1_2:17903352-17903371 None:intergenic 10.0%
!!! AATGATAAAATACTTTTTTT+AGG - chr1_2:17903354-17903373 Msa0060250:intron 10.0%
!!! ATGATAAAATACTTTTTTTA+GGG - chr1_2:17903355-17903374 Msa0060250:intron 10.0%
!!! GTTTTAAGAAAAATTAATTA+CGG + chr1_2:17903673-17903692 None:intergenic 10.0%
!!! AATTAAAATTTGCATTTTTT+TGG - chr1_2:17905389-17905408 Msa0060250:CDS 10.0%
!!! TTAAGTATATCTTTTTAAAA+TGG - chr1_2:17905536-17905555 Msa0060250:intron 10.0%
!!! TAATAATTTTTTTCATATCA+TGG + chr1_2:17906859-17906878 None:intergenic 10.0%
!!! AAATATTTTAACATACAAAA+TGG + chr1_2:17907414-17907433 None:intergenic 10.0%
!!! CATATAAACTTTTTTTTTGA+AGG + chr1_2:17901683-17901702 None:intergenic 15.0%
!! ATGCATATAGTATTTATTAT+AGG + chr1_2:17901843-17901862 None:intergenic 15.0%
!! AGATTATTGTGTAAAATTAA+TGG - chr1_2:17901933-17901952 Msa0060250:CDS 15.0%
!!! TCTATGTAGTTTTTATTTTT+GGG - chr1_2:17901979-17901998 Msa0060250:intron 15.0%
!! CAAAATTCTGAATATTTATA+GGG + chr1_2:17902198-17902217 None:intergenic 15.0%
!! ACAAAATTCTGAATATTTAT+AGG + chr1_2:17902199-17902218 None:intergenic 15.0%
!!! AGATTTTGTATGAAATTAAA+AGG - chr1_2:17902623-17902642 Msa0060250:intron 15.0%
!! TTATTTAATCGTAACAATTT+GGG + chr1_2:17902984-17903003 None:intergenic 15.0%
!! TTTATTTAATTGTGACAAAT+TGG + chr1_2:17903100-17903119 None:intergenic 15.0%
!!! TTTGAAATAATTCACTTATT+AGG - chr1_2:17903144-17903163 Msa0060250:intron 15.0%
!!! TACTAATACTTTGTTATTTT+TGG - chr1_2:17903191-17903210 Msa0060250:intron 15.0%
!!! CTTTTGATTCATTTATTTAA+AGG - chr1_2:17903271-17903290 Msa0060250:intron 15.0%
!!! TGATAAAATACTTTTTTTAG+GGG - chr1_2:17903356-17903375 Msa0060250:intron 15.0%
!!! ACTTAATTTTATGTGTATAA+TGG + chr1_2:17903512-17903531 None:intergenic 15.0%
!!! TTTTTATATATTGTTAGTAG+AGG - chr1_2:17903581-17903600 Msa0060250:intron 15.0%
!!! AATTGTTAAGCAATTAATTT+TGG + chr1_2:17904060-17904079 None:intergenic 15.0%
!!! TTATTAGTATTATTCTTTTG+TGG - chr1_2:17904563-17904582 Msa0060250:intron 15.0%
!!! TCATTTATTGTTGTTATTTA+TGG - chr1_2:17904714-17904733 Msa0060250:intron 15.0%
!!! CATTTATTGTTGTTATTTAT+GGG - chr1_2:17904715-17904734 Msa0060250:intron 15.0%
!! AACATAAAAGCTTATTATTT+GGG + chr1_2:17905100-17905119 None:intergenic 15.0%
!! TAACATAAAAGCTTATTATT+TGG + chr1_2:17905101-17905120 None:intergenic 15.0%
!! TTTATGTAATATTCATAAGT+TGG + chr1_2:17905189-17905208 None:intergenic 15.0%
!!! TAAAAATCCAAACTTAATTT+TGG + chr1_2:17905355-17905374 None:intergenic 15.0%
!!! CAAACATTATCTTTAATTTT+GGG + chr1_2:17906175-17906194 None:intergenic 15.0%
!! TGAAATAAATATCATTACTA+TGG + chr1_2:17906345-17906364 None:intergenic 15.0%
!!! ATTTGTGTTATTTTAGTTTT+TGG - chr1_2:17906512-17906531 Msa0060250:intron 15.0%
!!! ATGTTCATATTTTTGTTAAA+TGG - chr1_2:17909220-17909239 Msa0060250:intron 15.0%
!! TCATTTCATTAGAAAAATTA+TGG + chr1_2:17909874-17909893 None:intergenic 15.0%
!! AAAAAATCACATATGAATAA+GGG + chr1_2:17909909-17909928 None:intergenic 15.0%
!! AAAAAAATCACATATGAATA+AGG + chr1_2:17909910-17909929 None:intergenic 15.0%
!! TACATTAACATGTTTCAATT+CGG - chr1_2:17900074-17900093 Msa0060250:intron 20.0%
!!! TTTAGTTTTCTACTACTTTT+TGG + chr1_2:17900270-17900289 None:intergenic 20.0%
!!! TTTGAAGTTTCTTAAAAGTT+GGG + chr1_2:17900489-17900508 None:intergenic 20.0%
!!! TTTTGAAGTTTCTTAAAAGT+TGG + chr1_2:17900490-17900509 None:intergenic 20.0%
!! TAACGATCAAAATAAAATGA+GGG + chr1_2:17900548-17900567 None:intergenic 20.0%
!!! TCATGTTTTTGTTTTTGTTA+AGG - chr1_2:17900956-17900975 Msa0060250:CDS 20.0%
!!! CATGTTTTTGTTTTTGTTAA+GGG - chr1_2:17900957-17900976 Msa0060250:CDS 20.0%
!!! ATGTTTTTGTTTTTGTTAAG+GGG - chr1_2:17900958-17900977 Msa0060250:CDS 20.0%
!! TAATGATATGTCATGTTATT+TGG - chr1_2:17900986-17901005 Msa0060250:intron 20.0%
!! GATATAAAAACTTTCATTGA+TGG - chr1_2:17901024-17901043 Msa0060250:intron 20.0%
!! AAGAAAAATTTGATTCATTG+TGG - chr1_2:17901156-17901175 Msa0060250:CDS 20.0%
!! AGAAAAATTTGATTCATTGT+GGG - chr1_2:17901157-17901176 Msa0060250:CDS 20.0%
!! TGATTCCATTGAAAAAAATA+TGG - chr1_2:17901340-17901359 Msa0060250:intron 20.0%
!!! TTATTTTCGAATTCAATAAG+TGG - chr1_2:17901580-17901599 Msa0060250:intron 20.0%
!! GTTTATATGTATTGAGTTTA+AGG - chr1_2:17901694-17901713 Msa0060250:intron 20.0%
!!! ATTTGATGATTCTTTTTTGA+GGG + chr1_2:17901749-17901768 None:intergenic 20.0%
!!! TATTTGATGATTCTTTTTTG+AGG + chr1_2:17901750-17901769 None:intergenic 20.0%
!!! ATATAGATTTTGTGACATAT+TGG + chr1_2:17901913-17901932 None:intergenic 20.0%
!! TATTGTGTAAAATTAATGGT+AGG - chr1_2:17901937-17901956 Msa0060250:CDS 20.0%
!! ATTGTGTAAAATTAATGGTA+GGG - chr1_2:17901938-17901957 Msa0060250:CDS 20.0%
!!! GTCTATGTAGTTTTTATTTT+TGG - chr1_2:17901978-17901997 Msa0060250:intron 20.0%
!! ATGATTCAATAACTTATAAG+AGG + chr1_2:17902100-17902119 None:intergenic 20.0%
!!! TGTTGATGGAAAATTTTATA+GGG + chr1_2:17902258-17902277 None:intergenic 20.0%
!!! ATGTTGATGGAAAATTTTAT+AGG + chr1_2:17902259-17902278 None:intergenic 20.0%
!!! CATTTTTCTTAAGCATTTTA+GGG + chr1_2:17902352-17902371 None:intergenic 20.0%
!!! ACATTTTTCTTAAGCATTTT+AGG + chr1_2:17902353-17902372 None:intergenic 20.0%
!!! AAGTGTGATTTTATTTTGTA+AGG - chr1_2:17902386-17902405 Msa0060250:CDS 20.0%
!! ACAAAACTGTGAATATTTAT+AGG - chr1_2:17902416-17902435 Msa0060250:intron 20.0%
!! CAAAACTGTGAATATTTATA+GGG - chr1_2:17902417-17902436 Msa0060250:intron 20.0%
!! CGTTGAAAAATTTATGTATT+TGG + chr1_2:17902499-17902518 None:intergenic 20.0%
!! GTTGCAATTAATTAACTTAA+AGG + chr1_2:17902835-17902854 None:intergenic 20.0%
!! GTGTTACAAAAAATACTTAA+AGG + chr1_2:17902866-17902885 None:intergenic 20.0%
!!! AAGTATTTTTTGTAACACTT+AGG - chr1_2:17902868-17902887 Msa0060250:intron 20.0%
!! GTTTCAACTAAATAACTTAA+AGG + chr1_2:17902920-17902939 None:intergenic 20.0%
!! TATTTAATCGTAACAATTTG+GGG + chr1_2:17902983-17903002 None:intergenic 20.0%
!! GTTATTTAATCGTAACAATT+TGG + chr1_2:17902985-17903004 None:intergenic 20.0%
!! GTTACGATTAAATAACTTAA+AGG - chr1_2:17902989-17903008 Msa0060250:intron 20.0%
!! TAAATAGTTTCATAGTTATC+AGG - chr1_2:17903417-17903436 Msa0060250:intron 20.0%
!! AAATAGTTTCATAGTTATCA+GGG - chr1_2:17903418-17903437 Msa0060250:intron 20.0%
!! GAAAAATTAATTACGGATAA+TGG + chr1_2:17903666-17903685 None:intergenic 20.0%
!!! AGACAATTATGAAATTTTGT+TGG - chr1_2:17903757-17903776 Msa0060250:intron 20.0%
!! ATCTGAATTCAAATAAATGA+TGG - chr1_2:17905484-17905503 Msa0060250:intron 20.0%
!! ACTATTTAACAATACAAAGT+TGG + chr1_2:17905725-17905744 None:intergenic 20.0%
!!! CCAAACATTATCTTTAATTT+TGG + chr1_2:17906176-17906195 None:intergenic 20.0%
!! CCAAAATTAAAGATAATGTT+TGG - chr1_2:17906173-17906192 Msa0060250:intron 20.0%
!! TTAAAGATAATGTTTGGATT+TGG - chr1_2:17906179-17906198 Msa0060250:intron 20.0%
!!! TTTGATAGCAAACTAATATT+AGG - chr1_2:17906810-17906829 Msa0060250:intron 20.0%
!!! ACATTTTGAATACTTTTAAC+AGG - chr1_2:17906913-17906932 Msa0060250:intron 20.0%
!!! CATTTTGAATACTTTTAACA+GGG - chr1_2:17906914-17906933 Msa0060250:intron 20.0%
!! TATTTATATCTTCTCATACT+TGG - chr1_2:17907113-17907132 Msa0060250:intron 20.0%
!! TATGGTTTATAATTCTGAAT+TGG - chr1_2:17907970-17907989 Msa0060250:intron 20.0%
!! TTACTCAAATAAGTAATTGT+TGG - chr1_2:17908186-17908205 Msa0060250:intron 20.0%
!!! TAAGTAATTGTTGGTTTTTT+AGG - chr1_2:17908195-17908214 Msa0060250:intron 20.0%
!!! TTTGTTGTTATGATATAATC+TGG + chr1_2:17908627-17908646 None:intergenic 20.0%
!! TTTATTTAGTGTTTAGTGTT+TGG - chr1_2:17908711-17908730 Msa0060250:intron 20.0%
!!! ATTTTATGGAAAGAATCAAT+TGG - chr1_2:17908779-17908798 Msa0060250:intron 20.0%
!! TGTAGTTATCTTATAACAAA+AGG + chr1_2:17909298-17909317 None:intergenic 20.0%
!! CAAAAATTGAATTGTTATAG+AGG - chr1_2:17909788-17909807 Msa0060250:intron 20.0%
!!! ATCATGCATTTATTTTCATT+TGG - chr1_2:17910192-17910211 Msa0060250:five_prime_UTR 20.0%
!!! GTTTTATTGTCCAATTTTTT+TGG - chr1_2:17910240-17910259 Msa0060250:five_prime_UTR 20.0%
!! TAAGTTCAAACCAAAAAAAT+TGG + chr1_2:17910253-17910272 None:intergenic 20.0%
!!! TTTTTTGTTGAGTTTAGAAG+AGG + chr1_2:17899667-17899686 None:intergenic 25.0%
!!! CAACAAAAAAGTGTTTGATT+TGG - chr1_2:17899677-17899696 Msa0060250:CDS 25.0%
! AAACTCAAATTAATCTCAAG+AGG + chr1_2:17900003-17900022 None:intergenic 25.0%
!!! CTTGAGATTAATTTGAGTTT+TGG - chr1_2:17900003-17900022 Msa0060250:intron 25.0%
! TTCGTTTATCATATGAACTT+AGG + chr1_2:17900045-17900064 None:intergenic 25.0%
! AAAAAAAAGTTTAACTACGG+TGG + chr1_2:17900170-17900189 None:intergenic 25.0%
! GGGAAAAAAAAGTTTAACTA+CGG + chr1_2:17900173-17900192 None:intergenic 25.0%
! AGAAAAAATTATGCTAACAC+TGG + chr1_2:17900210-17900229 None:intergenic 25.0%
!!! GTGCAAAATTTTGAAAGATA+CGG - chr1_2:17900369-17900388 Msa0060250:intron 25.0%
! AGTGAATAGATAAAAACCTT+CGG - chr1_2:17900439-17900458 Msa0060250:intron 25.0%
! TTGAAGTTTCTTAAAAGTTG+GGG + chr1_2:17900488-17900507 None:intergenic 25.0%
! AACGATCAAAATAAAATGAG+GGG + chr1_2:17900547-17900566 None:intergenic 25.0%
! GTAACGATCAAAATAAAATG+AGG + chr1_2:17900549-17900568 None:intergenic 25.0%
! CTATTAAATGTCACGTTATA+GGG + chr1_2:17900573-17900592 None:intergenic 25.0%
! TCTATTAAATGTCACGTTAT+AGG + chr1_2:17900574-17900593 None:intergenic 25.0%
!!! ATTACTCAATCGATTTGTTT+TGG + chr1_2:17900729-17900748 None:intergenic 25.0%
!! TTTTCCCTGATTTCATAATA+CGG - chr1_2:17900860-17900879 Msa0060250:CDS 25.0%
!!! TGTTTTTGTTTTTGTTAAGG+GGG - chr1_2:17900959-17900978 Msa0060250:CDS 25.0%
!!! AGAGTTTTTTTAAGCTTCAA+TGG + chr1_2:17901127-17901146 None:intergenic 25.0%
! GAAAAATTTGATTCATTGTG+GGG - chr1_2:17901158-17901177 Msa0060250:CDS 25.0%
!! AATTTTCCTTCTCACATTAT+TGG + chr1_2:17901392-17901411 None:intergenic 25.0%
! GTATACAATCATGCATAATT+TGG - chr1_2:17901545-17901564 Msa0060250:intron 25.0%
!!! TTCTTTTTTGAGGGAATAAT+TGG + chr1_2:17901740-17901759 None:intergenic 25.0%
!!! ATGTAGTTTTTATTTTTGGG+TGG - chr1_2:17901982-17902001 Msa0060250:intron 25.0%
!! ATCAATTATTTCTTGGAAAG+AGG + chr1_2:17902135-17902154 None:intergenic 25.0%
! TGAAGGGTTAATTAAGTAAA+TGG - chr1_2:17902171-17902190 Msa0060250:intron 25.0%
!! TGCTGATGGAAAATTTTATA+GGG + chr1_2:17902289-17902308 None:intergenic 25.0%
!! ATGCTGATGGAAAATTTTAT+AGG + chr1_2:17902290-17902309 None:intergenic 25.0%
!! GCTGATGGAAAAATTTTATA+GGG + chr1_2:17902320-17902339 None:intergenic 25.0%
!! TGCTGATGGAAAAATTTTAT+AGG + chr1_2:17902321-17902340 None:intergenic 25.0%
!! ATCATCTGTTTCTTGTAAAT+AGG - chr1_2:17902529-17902548 Msa0060250:CDS 25.0%
! ATTTAATCGTAACAATTTGG+GGG + chr1_2:17902982-17903001 None:intergenic 25.0%
! CTTAAAGGACCTAATTAATA+CGG - chr1_2:17903004-17903023 Msa0060250:intron 25.0%
!! ATGTTTTCTCCGTATTAATT+AGG + chr1_2:17903016-17903035 None:intergenic 25.0%
! TTAATACGGAGAAAACATAA+AGG - chr1_2:17903018-17903037 Msa0060250:intron 25.0%
! TAACAATTTGAGAGTAAATG+TGG - chr1_2:17904072-17904091 Msa0060250:intron 25.0%
! AAATGGAGGATAAATGAATT+TGG + chr1_2:17904223-17904242 None:intergenic 25.0%
! GAGGATAAAGTAGATTATAT+TGG + chr1_2:17904258-17904277 None:intergenic 25.0%
! ATTTATCATGACGAATGAAT+TGG - chr1_2:17904291-17904310 Msa0060250:intron 25.0%
! AGTTTAAAAGCTTAAAAAGC+TGG + chr1_2:17904429-17904448 None:intergenic 25.0%
! TTAACGATGAAGATATTGTT+AGG + chr1_2:17904632-17904651 None:intergenic 25.0%
!!! ATCTACTATCACTTTTTGAA+GGG - chr1_2:17904960-17904979 Msa0060250:intron 25.0%
!!! AGTTTGTTTTTGAGAGTTAT+AGG - chr1_2:17905022-17905041 Msa0060250:intron 25.0%
! AATAAGTCAATTCATTCAGA+CGG - chr1_2:17905249-17905268 Msa0060250:CDS 25.0%
!!! ATTTTTTGCATTTATGCATG+TGG - chr1_2:17905299-17905318 Msa0060250:CDS 25.0%
! TGTTAAATAGTTCCATGATA+TGG - chr1_2:17905734-17905753 Msa0060250:intron 25.0%
! TTGTACTAAATACCATATCA+TGG + chr1_2:17905749-17905768 None:intergenic 25.0%
!!! TGAACAAATTGTTATTTTCG+TGG - chr1_2:17905826-17905845 Msa0060250:intron 25.0%
! TACTATGGTTTGAATACTTT+AGG + chr1_2:17906330-17906349 None:intergenic 25.0%
! TCTTTCATGATTTGACAAAT+AGG - chr1_2:17906599-17906618 Msa0060250:intron 25.0%
! AGTATAATAATTGAATGCAC+AGG + chr1_2:17906698-17906717 None:intergenic 25.0%
! AAGTTTGATAGAAAAACAGT+TGG - chr1_2:17906942-17906961 Msa0060250:intron 25.0%
!! TTTTCTGATAGAATAACCTA+AGG - chr1_2:17907993-17908012 Msa0060250:intron 25.0%
! TTTCTGATAGAATAACCTAA+GGG - chr1_2:17907994-17908013 Msa0060250:intron 25.0%
! AAGTTTATTAAAATGATCCG+TGG - chr1_2:17908153-17908172 Msa0060250:intron 25.0%
! ATATTTGAATCAACAACAAC+TGG + chr1_2:17908303-17908322 None:intergenic 25.0%
! TGATTCAAATATCAACTTAC+AGG - chr1_2:17908311-17908330 Msa0060250:intron 25.0%
! GTATTTAACGAGTATTATTC+TGG - chr1_2:17908373-17908392 Msa0060250:intron 25.0%
! AGTAAATTTAAGTCTTAGTG+AGG + chr1_2:17908523-17908542 None:intergenic 25.0%
! TACTTGAACTTAAAATTGCA+AGG - chr1_2:17908539-17908558 Msa0060250:intron 25.0%
! GAAAAACTTATTACCAACTT+AGG + chr1_2:17908660-17908679 None:intergenic 25.0%
!! ACTGAATTAGAGCAATTTTA+TGG - chr1_2:17908765-17908784 Msa0060250:intron 25.0%
!!! ACTTTGTTTTCTTAAATTCC+AGG - chr1_2:17909006-17909025 Msa0060250:intron 25.0%
!! TTCACATTTTATCTATTTCC+TGG + chr1_2:17909346-17909365 None:intergenic 25.0%
! CATATAAAAATGACATTCAC+AGG + chr1_2:17909655-17909674 None:intergenic 25.0%
! AAATTGGACAATAAAACACA+AGG + chr1_2:17910237-17910256 None:intergenic 25.0%
!!! TTTTGTCCAATTGATTTTAG+TGG - chr1_2:17910321-17910340 Msa0060250:five_prime_UTR 25.0%
TTGAGAATAACGTTTGATTC+TGG - chr1_2:17899726-17899745 Msa0060250:CDS 30.0%
AAACTGAAAACTGAAGAAGA+AGG + chr1_2:17899948-17899967 None:intergenic 30.0%
!!! GATTAATTTGAGTTTTGGAG+TGG - chr1_2:17900008-17900027 Msa0060250:intron 30.0%
! ACTCTTTTTCCATGTTATGT+TGG - chr1_2:17900134-17900153 Msa0060250:intron 30.0%
ATGAAAATTACAGATTCCGA+AGG + chr1_2:17900458-17900477 None:intergenic 30.0%
TGAAGTTTCTTAAAAGTTGG+GGG + chr1_2:17900487-17900506 None:intergenic 30.0%
ACGATCAAAATAAAATGAGG+GGG + chr1_2:17900546-17900565 None:intergenic 30.0%
TCGATTGAGTAATTGACTAA+CGG - chr1_2:17900736-17900755 Msa0060250:intron 30.0%
TTTCCCTGATTTCATAATAC+GGG - chr1_2:17900861-17900880 Msa0060250:CDS 30.0%
AAACATGACCTTTCTACATT+CGG + chr1_2:17900944-17900963 None:intergenic 30.0%
TTAAAATGAGCGCAAATTCT+TGG - chr1_2:17901082-17901101 Msa0060250:intron 30.0%
!!! CCTCTCCATATTTTTTTCAA+TGG + chr1_2:17901348-17901367 None:intergenic 30.0%
CCATTGAAAAAAATATGGAG+AGG - chr1_2:17901345-17901364 Msa0060250:intron 30.0%
TCACATTATTGGATCTTGTT+TGG + chr1_2:17901381-17901400 None:intergenic 30.0%
TGCTTATAATAGTGATCAGT+GGG + chr1_2:17901778-17901797 None:intergenic 30.0%
TTGCTTATAATAGTGATCAG+TGG + chr1_2:17901779-17901798 None:intergenic 30.0%
TAAAAACTACATAGACCGAT+AGG + chr1_2:17901974-17901993 None:intergenic 30.0%
TAAATGCAACAATTGGCAAA+TGG + chr1_2:17902062-17902081 None:intergenic 30.0%
TGTGTGATAAATGCAACAAT+TGG + chr1_2:17902069-17902088 None:intergenic 30.0%
! TTATTTCTTGGAAAGAGGAT+CGG + chr1_2:17902130-17902149 None:intergenic 30.0%
ATAGGGACTAAAAATGTTGA+TGG + chr1_2:17902272-17902291 None:intergenic 30.0%
ATGCTTAAGAAAAATGTCAC+AGG - chr1_2:17902356-17902375 Msa0060250:CDS 30.0%
TGCTTAAGAAAAATGTCACA+GGG - chr1_2:17902357-17902376 Msa0060250:CDS 30.0%
! TTTTTCCAGCTAAATTACAC+TGG - chr1_2:17902774-17902793 Msa0060250:intron 30.0%
ATTAACTTAAATGACCGAAG+TGG - chr1_2:17903059-17903078 Msa0060250:intron 30.0%
! AGACGATTATGAAATTTTGC+TGG - chr1_2:17903551-17903570 Msa0060250:intron 30.0%
ATGTTATATACTACGTTTCG+TGG + chr1_2:17904114-17904133 None:intergenic 30.0%
AATGAACTGAGACAAACATT+TGG - chr1_2:17904358-17904377 Msa0060250:intron 30.0%
! TTTATGGGTCCAGATTTTAT+TGG - chr1_2:17904730-17904749 Msa0060250:intron 30.0%
! TTATGGGTCCAGATTTTATT+GGG - chr1_2:17904731-17904750 Msa0060250:intron 30.0%
! TTTTTACCCCCAATAAAATC+TGG + chr1_2:17904742-17904761 None:intergenic 30.0%
!!! GATCTACTATCACTTTTTGA+AGG - chr1_2:17904959-17904978 Msa0060250:intron 30.0%
!! GTAATATTCATAAGTTGGTC+TGG + chr1_2:17905184-17905203 None:intergenic 30.0%
TAAATGCAAAAAATCCCAAC+AGG + chr1_2:17905293-17905312 None:intergenic 30.0%
AGACGATCCAAAATTAAGTT+TGG - chr1_2:17905345-17905364 Msa0060250:CDS 30.0%
ATATTCCAAATGTGTGAAAG+TGG - chr1_2:17905441-17905460 Msa0060250:intron 30.0%
TATTCCAAATGTGTGAAAGT+GGG - chr1_2:17905442-17905461 Msa0060250:intron 30.0%
CAGTCTATTTATCTGTTATG+AGG - chr1_2:17905564-17905583 Msa0060250:intron 30.0%
GCTATTTAACAACACAATGT+TGG + chr1_2:17905646-17905665 None:intergenic 30.0%
ATAGCAACACTTTAGATGTT+CGG - chr1_2:17905670-17905689 Msa0060250:intron 30.0%
!!! CAAATTGTTATTTTCGTGGT+CGG - chr1_2:17905830-17905849 Msa0060250:intron 30.0%
GTCTTGAATTATCTACACTA+TGG - chr1_2:17906238-17906257 Msa0060250:intron 30.0%
ATAAGAAGAGAGTTATTGCA+CGG + chr1_2:17906291-17906310 None:intergenic 30.0%
ATCTTCATCATTCTACTGTT+GGG + chr1_2:17906403-17906422 None:intergenic 30.0%
AATCTTCATCATTCTACTGT+TGG + chr1_2:17906404-17906423 None:intergenic 30.0%
AAGTGTAACAACACATATTG+TGG + chr1_2:17906442-17906461 None:intergenic 30.0%
ACACAAATTCAAAAAACCAG+AGG + chr1_2:17906500-17906519 None:intergenic 30.0%
!!! TCAAGAGTTATTTTTACCCT+TGG - chr1_2:17906762-17906781 Msa0060250:intron 30.0%
CAAAAGAAACTTGAGTGTTA+AGG + chr1_2:17906794-17906813 None:intergenic 30.0%
!!! ATGTTTTGACCTGCATTAAA+GGG + chr1_2:17907311-17907330 None:intergenic 30.0%
TACTGAATGTTGCAAAATAG+CGG + chr1_2:17907561-17907580 None:intergenic 30.0%
TATAGATTGAGGAAAGAACT+TGG + chr1_2:17907674-17907693 None:intergenic 30.0%
AATATCGTCAGTATAGATTG+AGG + chr1_2:17907685-17907704 None:intergenic 30.0%
TTATCACTTGATCCAGTAAT+TGG - chr1_2:17907733-17907752 Msa0060250:intron 30.0%
TATCACTTGATCCAGTAATT+GGG - chr1_2:17907734-17907753 Msa0060250:intron 30.0%
AAAACTGTTAGGAGAATACA+TGG - chr1_2:17907828-17907847 Msa0060250:intron 30.0%
TCATCTATAAGAGTTGTTGA+GGG - chr1_2:17907856-17907875 Msa0060250:intron 30.0%
TGTATTACTGCAACAAAAGT+GGG - chr1_2:17907897-17907916 Msa0060250:intron 30.0%
ATGAATGAATGATTACCCTT+AGG + chr1_2:17908012-17908031 None:intergenic 30.0%
TGAGTAAATGATATGATCCA+CGG + chr1_2:17908173-17908192 None:intergenic 30.0%
!!! ATTGTTGGTTTTTTAGGCAA+TGG - chr1_2:17908201-17908220 Msa0060250:intron 30.0%
AAAGACTGAAAGAGAGATTA+AGG + chr1_2:17908352-17908371 None:intergenic 30.0%
TTGAACTTAAAATTGCAAGG+TGG - chr1_2:17908542-17908561 Msa0060250:intron 30.0%
!!! CTTTTTTGGAGGTTTTTCAT+TGG - chr1_2:17908939-17908958 Msa0060250:intron 30.0%
! TTGTTTTCTTAAATTCCAGG+AGG - chr1_2:17909009-17909028 Msa0060250:intron 30.0%
ATAATGAGCGAAGAGATATT+TGG - chr1_2:17909074-17909093 Msa0060250:intron 30.0%
TTAATTCATACCGTGATGAT+GGG + chr1_2:17909110-17909129 None:intergenic 30.0%
! CATTTTATCTATTTCCTGGT+TGG + chr1_2:17909342-17909361 None:intergenic 30.0%
TTTATTTCCTTTCTCGAAAC+AGG - chr1_2:17909428-17909447 Msa0060250:intron 30.0%
! AGCTTTGATGTGATAAATTC+AGG - chr1_2:17909468-17909487 Msa0060250:intron 30.0%
GTAAATATATATGCAGCAAG+AGG + chr1_2:17909501-17909520 None:intergenic 30.0%
TAAACTAAGAGATTCAAGGA+TGG + chr1_2:17909626-17909645 None:intergenic 30.0%
CACATAAACTAAGAGATTCA+AGG + chr1_2:17909630-17909649 None:intergenic 30.0%
AAGTATAACTTACTACAGTG+AGG - chr1_2:17909846-17909865 Msa0060250:intron 30.0%
!!! CATATGTGATTTTTTTCCCT+TGG - chr1_2:17909914-17909933 Msa0060250:CDS 30.0%
! CATCAAATGAGAATTTTCCA+TGG + chr1_2:17910001-17910020 None:intergenic 30.0%
!!! GATAAAGAACTGCTTTTTTG+TGG + chr1_2:17910031-17910050 None:intergenic 30.0%
!!! GTTCTTTATCGCAGTTTTTT+TGG - chr1_2:17910041-17910060 Msa0060250:CDS 30.0%
!!! TTTTTGGTGATGCTTCTATT+AGG - chr1_2:17910057-17910076 Msa0060250:CDS 30.0%
CATCAATCTCATCTTTGTAT+TGG + chr1_2:17910096-17910115 None:intergenic 30.0%
TACAAAGATGAGATTGATGA+AGG - chr1_2:17910097-17910116 Msa0060250:five_prime_UTR 30.0%
!! ATTCTAGGACTTTCCAAATA+AGG + chr1_2:17910159-17910178 None:intergenic 30.0%
GAAAATAAATGCATGATTCC+AGG + chr1_2:17910189-17910208 None:intergenic 30.0%
CATTTGGCAAGTATTTATTC+AGG - chr1_2:17910208-17910227 Msa0060250:five_prime_UTR 30.0%
GATAACAGCAACATACTCTA+CGG + chr1_2:17899418-17899437 None:intergenic 35.0%
TAGCATAGCTTAGCTAAACA+TGG - chr1_2:17899641-17899660 Msa0060250:CDS 35.0%
ATGGAAAGTTTCTCAGTTGA+AGG - chr1_2:17899767-17899786 Msa0060250:CDS 35.0%
ATGAGAAATTGAGTACCTCT+TGG + chr1_2:17899881-17899900 None:intergenic 35.0%
!!! ACTTTTTTTTCCCCTTCTTC+TGG - chr1_2:17900180-17900199 Msa0060250:CDS 35.0%
! ATGGAGTATTATGTGTATGC+AGG - chr1_2:17900239-17900258 Msa0060250:CDS 35.0%
AGTATTATGTGTATGCAGGT+TGG - chr1_2:17900243-17900262 Msa0060250:CDS 35.0%
GTATTATGTGTATGCAGGTT+GGG - chr1_2:17900244-17900263 Msa0060250:CDS 35.0%
!! ACACAAAAGTGTCACATGTA+CGG - chr1_2:17900675-17900694 Msa0060250:CDS 35.0%
TGAGTAATTGACTAACGGTT+AGG - chr1_2:17900741-17900760 Msa0060250:intron 35.0%
GTACCCGTATTATGAAATCA+GGG + chr1_2:17900867-17900886 None:intergenic 35.0%
CTGATTTCATAATACGGGTA+CGG - chr1_2:17900866-17900885 Msa0060250:CDS 35.0%
TGATTTCATAATACGGGTAC+GGG - chr1_2:17900867-17900886 Msa0060250:CDS 35.0%
AACATGACCTTTCTACATTC+GGG + chr1_2:17900943-17900962 None:intergenic 35.0%
! TTGATGGTTAAAAGAGCAAC+CGG - chr1_2:17901040-17901059 Msa0060250:intron 35.0%
AAAAGAGCAACCGGATTATT+CGG - chr1_2:17901049-17901068 Msa0060250:intron 35.0%
CATTTCCTTACCGAATAATC+CGG + chr1_2:17901062-17901081 None:intergenic 35.0%
AATTTGATTCATTGTGGGGA+CGG - chr1_2:17901162-17901181 Msa0060250:CDS 35.0%
TGGAATCATTAACCGTTAGT+AGG + chr1_2:17901328-17901347 None:intergenic 35.0%
CAAGATCCAATAATGTGAGA+AGG - chr1_2:17901383-17901402 Msa0060250:intron 35.0%
TAATGTTGGACACGCAATAT+TGG + chr1_2:17901478-17901497 None:intergenic 35.0%
ATAGGGACTAAAAATGCTGA+TGG + chr1_2:17902303-17902322 None:intergenic 35.0%
TTAGGGACTAAAAATGCTGA+TGG + chr1_2:17902335-17902354 None:intergenic 35.0%
TCATAGTTATCAGGGAGAAT+TGG - chr1_2:17903426-17903445 Msa0060250:intron 35.0%
TGAGTTTAATGCGGAGATAA+AGG + chr1_2:17903895-17903914 None:intergenic 35.0%
TCCGCATTAAACTCAAGAAT+CGG - chr1_2:17903900-17903919 Msa0060250:intron 35.0%
! ACCGATTCTTGAGTTTAATG+CGG + chr1_2:17903904-17903923 None:intergenic 35.0%
TATATACTACGTTTCGTGGA+GGG + chr1_2:17904110-17904129 None:intergenic 35.0%
TTATATACTACGTTTCGTGG+AGG + chr1_2:17904111-17904130 None:intergenic 35.0%
AAAGAAGAGGACAAAGTGTA+GGG + chr1_2:17904182-17904201 None:intergenic 35.0%
TGTGTTTGAAGAGAAAGAAG+AGG + chr1_2:17904195-17904214 None:intergenic 35.0%
ATTGGTTGAGTTCGTAGAAA+TGG + chr1_2:17904240-17904259 None:intergenic 35.0%
ATAAATCAAGAAACAGCGAG+AGG + chr1_2:17904277-17904296 None:intergenic 35.0%
GAATATGTTCGACAATGAAG+CGG - chr1_2:17904321-17904340 Msa0060250:intron 35.0%
AATATGTTCGACAATGAAGC+GGG - chr1_2:17904322-17904341 Msa0060250:intron 35.0%
GAAAAACACGAAGTTATGAC+TGG - chr1_2:17904386-17904405 Msa0060250:intron 35.0%
AGATAATAACCGAACCTCAT+AGG + chr1_2:17904518-17904537 None:intergenic 35.0%
CGATGAAGATATTGTTAGGT+CGG + chr1_2:17904628-17904647 None:intergenic 35.0%
! TATGGGTCCAGATTTTATTG+GGG - chr1_2:17904732-17904751 Msa0060250:intron 35.0%
!! AATTGATGAGAGTGCTTGAT+TGG - chr1_2:17904770-17904789 Msa0060250:intron 35.0%
!! ATTGATGAGAGTGCTTGATT+GGG - chr1_2:17904771-17904790 Msa0060250:intron 35.0%
! ACATTCACTCAGATTTTCCT+AGG + chr1_2:17904839-17904858 None:intergenic 35.0%
!!! AGTGTGGGTTTTTTATGGTT+TGG - chr1_2:17904923-17904942 Msa0060250:intron 35.0%
GGAACCAATCTTCTACTTAT+AGG - chr1_2:17904981-17905000 Msa0060250:intron 35.0%
ACCAATCTTCTACTTATAGG+TGG - chr1_2:17904984-17905003 Msa0060250:intron 35.0%
ACCACCTATAAGTAGAAGAT+TGG + chr1_2:17904988-17905007 None:intergenic 35.0%
AATCTTCTACTTATAGGTGG+TGG - chr1_2:17904987-17905006 Msa0060250:intron 35.0%
GATTCATATTCCTTCCTGTT+GGG - chr1_2:17905276-17905295 Msa0060250:CDS 35.0%
! TCACACATTTGGAATATCAG+TGG + chr1_2:17905438-17905457 None:intergenic 35.0%
ATTCCAAATGTGTGAAAGTG+GGG - chr1_2:17905443-17905462 Msa0060250:intron 35.0%
ATTCAGATACCTAGTAGTTG+TGG + chr1_2:17905472-17905491 None:intergenic 35.0%
! TTTTATAGTAGTGCACGTGA+GGG - chr1_2:17905903-17905922 Msa0060250:intron 35.0%
AAAGACGTGCACTACTAAAA+GGG + chr1_2:17906098-17906117 None:intergenic 35.0%
ATGATTGGATGCTTATGAGT+GGG + chr1_2:17906378-17906397 None:intergenic 35.0%
TATGATTGGATGCTTATGAG+TGG + chr1_2:17906379-17906398 None:intergenic 35.0%
TTCTACTGTTGGGATATGAT+TGG + chr1_2:17906393-17906412 None:intergenic 35.0%
GGTATATGCTATTAAGTGTG+TGG - chr1_2:17906533-17906552 Msa0060250:intron 35.0%
ATATGCTATTAAGTGTGTGG+TGG - chr1_2:17906536-17906555 Msa0060250:intron 35.0%
TCATCTGGAAAGGAAAATGT+AGG + chr1_2:17906563-17906582 None:intergenic 35.0%
!!! AGTTATTTTTACCCTTGGAC+AGG - chr1_2:17906767-17906786 Msa0060250:intron 35.0%
! TGTTGTTATTGTTGTGTGAC+TGG - chr1_2:17906965-17906984 Msa0060250:intron 35.0%
TGATTTCCTGACTATTGCTT+AGG - chr1_2:17907045-17907064 Msa0060250:intron 35.0%
! ACTATTGCTTAGGTTGTTGA+AGG - chr1_2:17907055-17907074 Msa0060250:intron 35.0%
! CTATTGCTTAGGTTGTTGAA+GGG - chr1_2:17907056-17907075 Msa0060250:intron 35.0%
!!! TGTTTTGACCTGCATTAAAG+GGG + chr1_2:17907310-17907329 None:intergenic 35.0%
!!! GATGTTTTGACCTGCATTAA+AGG + chr1_2:17907312-17907331 None:intergenic 35.0%
GATACTATTTCAGCTGAAGA+AGG + chr1_2:17907348-17907367 None:intergenic 35.0%
GAAATAGTATCTGAACCACT+TGG - chr1_2:17907357-17907376 Msa0060250:intron 35.0%
ATCACTTGATCCAGTAATTG+GGG - chr1_2:17907735-17907754 Msa0060250:intron 35.0%
CTCATCTATAAGAGTTGTTG+AGG - chr1_2:17907855-17907874 Msa0060250:intron 35.0%
CTGTATTACTGCAACAAAAG+TGG - chr1_2:17907896-17907915 Msa0060250:intron 35.0%
! TGGGACAAAATTTTCTACAC+AGG - chr1_2:17907916-17907935 Msa0060250:intron 35.0%
!!! TCCTCTCTGGTTTTCTTTTA+TGG - chr1_2:17907952-17907971 Msa0060250:intron 35.0%
ACCATAAAAGAAAACCAGAG+AGG + chr1_2:17907956-17907975 None:intergenic 35.0%
AGGAGAACTAGTGCAATAAA+TGG + chr1_2:17908061-17908080 None:intergenic 35.0%
!!! TTTTTTAGGCAATGGAAGAG+TGG - chr1_2:17908209-17908228 Msa0060250:intron 35.0%
GTGTACATGTATGATGTATC+TGG + chr1_2:17908443-17908462 None:intergenic 35.0%
ATGATAGCAAGTACTCTATG+TGG + chr1_2:17908485-17908504 None:intergenic 35.0%
TGCTATCATTCTAGATACCT+TGG - chr1_2:17908496-17908515 Msa0060250:intron 35.0%
AAAAGACTATGCTCCTAAGT+TGG - chr1_2:17908644-17908663 Msa0060250:intron 35.0%
!! GTTTCTGGTAAGATTGTTCA+TGG - chr1_2:17908876-17908895 Msa0060250:intron 35.0%
AACCTCCAAAAAAGAAGACA+GGG + chr1_2:17908933-17908952 None:intergenic 35.0%
AAACCTCCAAAAAAGAAGAC+AGG + chr1_2:17908934-17908953 None:intergenic 35.0%
CTTAATTCATACCGTGATGA+TGG + chr1_2:17909111-17909130 None:intergenic 35.0%
CATCATCACGGTATGAATTA+AGG - chr1_2:17909109-17909128 Msa0060250:intron 35.0%
TCTCAAAGAAACAGTTACTG+TGG + chr1_2:17909143-17909162 None:intergenic 35.0%
TATCTATTTCCTGGTTGGAT+TGG + chr1_2:17909337-17909356 None:intergenic 35.0%
!! TTTGTTAAGACTGTTTCTGC+TGG - chr1_2:17909546-17909565 Msa0060250:intron 35.0%
AACCAACTTAAAAGCTGGTT+TGG + chr1_2:17909705-17909724 None:intergenic 35.0%
TTGAGAACCAACTTAAAAGC+TGG + chr1_2:17909710-17909729 None:intergenic 35.0%
!! CTAGAAGTAGCTTTAAAACC+AGG + chr1_2:17909738-17909757 None:intergenic 35.0%
! GCAATTCATACTTTGCCTTT+TGG - chr1_2:17909945-17909964 Msa0060250:CDS 35.0%
! ATTCATACTTTGCCTTTTGG+AGG - chr1_2:17909948-17909967 Msa0060250:CDS 35.0%
! ATCTTTGTATTGGTGTATGG+TGG + chr1_2:17910086-17910105 None:intergenic 35.0%
! CTCATCTTTGTATTGGTGTA+TGG + chr1_2:17910089-17910108 None:intergenic 35.0%
! GCTATAATTCGTGCCTTATT+TGG - chr1_2:17910143-17910162 Msa0060250:five_prime_UTR 35.0%
ATTCCAGGACAAAGAATTCT+AGG + chr1_2:17910174-17910193 None:intergenic 35.0%
TTATTCTCAAGCACAAGACA+TGG + chr1_2:17910280-17910299 None:intergenic 35.0%
CTTGTGCTTGAGAATAAAGT+AGG - chr1_2:17910283-17910302 Msa0060250:five_prime_UTR 35.0%
GCATGACCACTAAAATCAAT+TGG + chr1_2:17910330-17910349 None:intergenic 35.0%
ATTGAGTACCTCTTGGATGA+AGG + chr1_2:17899874-17899893 None:intergenic 40.0%
GATTGGACACCAACATAACA+TGG + chr1_2:17900146-17900165 None:intergenic 40.0%
AGTTTAACTACGGTGGAGAT+TGG + chr1_2:17900163-17900182 None:intergenic 40.0%
ATGACATTCAATCCACGTAG+AGG + chr1_2:17900607-17900626 None:intergenic 40.0%
! AATGTTATTAGTCTGTGCCG+TGG + chr1_2:17900631-17900650 None:intergenic 40.0%
ACGGTTAACTTTCACATCGT+AGG - chr1_2:17900694-17900713 Msa0060250:CDS 40.0%
AATTGACTAACGGTTAGGCT+TGG - chr1_2:17900746-17900765 Msa0060250:intron 40.0%
ATTTGACTGGGTTTGGGTAT+GGG - chr1_2:17900831-17900850 Msa0060250:CDS 40.0%
CGTACCCGTATTATGAAATC+AGG + chr1_2:17900868-17900887 None:intergenic 40.0%
ACATGACCTTTCTACATTCG+GGG + chr1_2:17900942-17900961 None:intergenic 40.0%
ATTTGATTCATTGTGGGGAC+GGG - chr1_2:17901163-17901182 Msa0060250:CDS 40.0%
ATTCAATTTCTGATCCCCGT+TGG - chr1_2:17901228-17901247 Msa0060250:intron 40.0%
TTCAATTTCTGATCCCCGTT+GGG - chr1_2:17901229-17901248 Msa0060250:intron 40.0%
TCATTAACCGTTAGTAGGCA+TGG + chr1_2:17901323-17901342 None:intergenic 40.0%
CTGTGATAGGAGGATAATGT+TGG + chr1_2:17901492-17901511 None:intergenic 40.0%
TAGGGCAGTATAACACCTAT+CGG - chr1_2:17901956-17901975 Msa0060250:CDS 40.0%
TTGGGTGGAAAATTCGTGTA+TGG - chr1_2:17901997-17902016 Msa0060250:intron 40.0%
TGGGTGGAAAATTCGTGTAT+GGG - chr1_2:17901998-17902017 Msa0060250:intron 40.0%
GACATCCAGTGTAATTTAGC+TGG + chr1_2:17902782-17902801 None:intergenic 40.0%
CTTAAATGACCGAAGTGGTA+CGG - chr1_2:17903064-17903083 Msa0060250:intron 40.0%
!!! CCTTTTTTTCCGTACCACTT+CGG + chr1_2:17903076-17903095 None:intergenic 40.0%
GAAAGAAGAGGACAAAGTGT+AGG + chr1_2:17904183-17904202 None:intergenic 40.0%
TATCACATGAACTCAGACGA+AGG - chr1_2:17904593-17904612 Msa0060250:intron 40.0%
! ATGGGTCCAGATTTTATTGG+GGG - chr1_2:17904733-17904752 Msa0060250:intron 40.0%
GTTCTGTTCTGTTGAATCCT+AGG - chr1_2:17904819-17904838 Msa0060250:intron 40.0%
! TTTCTGGTGTGTGTACTGTT+CGG - chr1_2:17904885-17904904 Msa0060250:intron 40.0%
!!! GTTGCAGTGTGGGTTTTTTA+TGG - chr1_2:17904918-17904937 Msa0060250:intron 40.0%
AGTCAATTCATTCAGACGGT+TGG - chr1_2:17905253-17905272 Msa0060250:CDS 40.0%
GTCAATTCATTCAGACGGTT+GGG - chr1_2:17905254-17905273 Msa0060250:CDS 40.0%
GGATTCATATTCCTTCCTGT+TGG - chr1_2:17905275-17905294 Msa0060250:CDS 40.0%
TGCAAAAAATCCCAACAGGA+AGG + chr1_2:17905289-17905308 None:intergenic 40.0%
GCATTTATGCATGTGGAATG+TGG - chr1_2:17905306-17905325 Msa0060250:CDS 40.0%
ATTCCCCACTTTCACACATT+TGG + chr1_2:17905449-17905468 None:intergenic 40.0%
AGCATCTTAAGTGTCTCAAG+TGG + chr1_2:17905590-17905609 None:intergenic 40.0%
CTTGAGACACTTAAGATGCT+AGG - chr1_2:17905590-17905609 Msa0060250:intron 40.0%
CACTTAAGATGCTAGGTCTT+AGG - chr1_2:17905597-17905616 Msa0060250:intron 40.0%
ACACAATGTTGGATCGTCAA+TGG + chr1_2:17905635-17905654 None:intergenic 40.0%
CACTTTAGATGTTCGGTCAT+AGG - chr1_2:17905677-17905696 Msa0060250:intron 40.0%
! GTTTTATAGTAGTGCACGTG+AGG - chr1_2:17905902-17905921 Msa0060250:intron 40.0%
TTTATAGTAGTGCACGTGAG+GGG - chr1_2:17905904-17905923 Msa0060250:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG - chr1_2:17905949-17905968 Msa0060250:intron 40.0%
AACAGCCTCTTGTGTAAAAC+AGG - chr1_2:17905992-17906011 Msa0060250:intron 40.0%
ACAGCCTCTTGTGTAAAACA+GGG - chr1_2:17905993-17906012 Msa0060250:intron 40.0%
! CTTACCCTGTTTTACACAAG+AGG + chr1_2:17906000-17906019 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG - chr1_2:17905998-17906017 Msa0060250:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr1_2:17906024-17906043 Msa0060250:intron 40.0%
GAAAGACGTGCACTACTAAA+AGG + chr1_2:17906099-17906118 None:intergenic 40.0%
TGCACGGAATAGACTCTATT+TGG + chr1_2:17906275-17906294 None:intergenic 40.0%
GTGCTTCTAATCATCTGGAA+AGG + chr1_2:17906573-17906592 None:intergenic 40.0%
TGCTTGTGCTTCTAATCATC+TGG + chr1_2:17906578-17906597 None:intergenic 40.0%
ATCAAAGATCTCCTAACCAG+TGG + chr1_2:17906658-17906677 None:intergenic 40.0%
ATACTCCAGCAAGTGTGAAT+TGG - chr1_2:17906713-17906732 Msa0060250:intron 40.0%
AACAACCAATTCACACTTGC+TGG + chr1_2:17906721-17906740 None:intergenic 40.0%
TGTTATTGTTGTGTGACTGG+AGG - chr1_2:17906968-17906987 Msa0060250:intron 40.0%
AGTCTGAGTTGTGTAGTTAG+TGG - chr1_2:17906996-17907015 Msa0060250:intron 40.0%
CAACAACCTAAGCAATAGTC+AGG + chr1_2:17907054-17907073 None:intergenic 40.0%
GGTGTAATTGCATTGCAGAT+TGG - chr1_2:17907134-17907153 Msa0060250:intron 40.0%
CTCATGTAAAACTGCACTCA+AGG - chr1_2:17907169-17907188 Msa0060250:intron 40.0%
CACTCAAGGAATTGAAGCAT+TGG - chr1_2:17907183-17907202 Msa0060250:intron 40.0%
!! CAAGGAATTGAAGCATTGGA+TGG - chr1_2:17907187-17907206 Msa0060250:intron 40.0%
! CACTGAAAACGTACCTTTTC+CGG + chr1_2:17907215-17907234 None:intergenic 40.0%
GACATAGTATCTGAACCACT+TGG - chr1_2:17907262-17907281 Msa0060250:intron 40.0%
CATGAATTCCCCTTTAATGC+AGG - chr1_2:17907299-17907318 Msa0060250:intron 40.0%
ATGATCAACACAACTCCAAG+TGG + chr1_2:17907375-17907394 None:intergenic 40.0%
! TTGTGTTGATCATCTCTGCA+TGG - chr1_2:17907382-17907401 Msa0060250:intron 40.0%
AGCTTGGAGGGAAGAAAAAA+GGG + chr1_2:17907456-17907475 None:intergenic 40.0%
TAGCTTGGAGGGAAGAAAAA+AGG + chr1_2:17907457-17907476 None:intergenic 40.0%
! ATTGACATCACTAGCTTGGA+GGG + chr1_2:17907468-17907487 None:intergenic 40.0%
ACTGGATCAAGTGATAACAC+TGG + chr1_2:17907730-17907749 None:intergenic 40.0%
! TTCTCTTTGTTTCTCCTCTC+TGG - chr1_2:17907939-17907958 Msa0060250:intron 40.0%
! CAAAGCTCTAATACCAGTTG+AGG + chr1_2:17908081-17908100 None:intergenic 40.0%
! CTTTGATCACAGAGTGTTCA+GGG - chr1_2:17908096-17908115 Msa0060250:intron 40.0%
! AAGACGACTTCAAGTTTGCT+TGG - chr1_2:17908130-17908149 Msa0060250:intron 40.0%
! GTACGTGTATCTTGTCACTT+TGG - chr1_2:17908416-17908435 Msa0060250:intron 40.0%
TTAAGTCTTAGTGAGGTCCA+AGG + chr1_2:17908516-17908535 None:intergenic 40.0%
AAGGATAATCGCTGGAAAGT+GGG - chr1_2:17908572-17908591 Msa0060250:intron 40.0%
TAGAGAATCCACCTAGGAAT+AGG + chr1_2:17908742-17908761 None:intergenic 40.0%
! AGTCTTTAGAGAATCCACCT+AGG + chr1_2:17908748-17908767 None:intergenic 40.0%
! CGATCGCTTGATAAAGCTTT+TGG - chr1_2:17908842-17908861 Msa0060250:intron 40.0%
TTGGATGACGACAAAGTTTC+TGG - chr1_2:17908861-17908880 Msa0060250:intron 40.0%
TCTGGTAAGATTGTTCATGG+AGG - chr1_2:17908879-17908898 Msa0060250:intron 40.0%
GATTGTTCATGGAGGTGAAA+AGG - chr1_2:17908887-17908906 Msa0060250:intron 40.0%
!!! AAGCTCCCTGTCTTCTTTTT+TGG - chr1_2:17908925-17908944 Msa0060250:intron 40.0%
! GATTAGCCCTACTGTTCTAT+TGG - chr1_2:17909031-17909050 Msa0060250:intron 40.0%
GGACATCCAATAGAACAGTA+GGG + chr1_2:17909040-17909059 None:intergenic 40.0%
TCATTATCAGAGAATCACGC+GGG + chr1_2:17909061-17909080 None:intergenic 40.0%
CTCATTATCAGAGAATCACG+CGG + chr1_2:17909062-17909081 None:intergenic 40.0%
TCCATTACTTCCCATCATCA+CGG - chr1_2:17909097-17909116 Msa0060250:intron 40.0%
TTAATCCAACCAATCCAACC+AGG - chr1_2:17909325-17909344 Msa0060250:intron 40.0%
!! TATTTCCTGGTTGGATTGGT+TGG + chr1_2:17909333-17909352 None:intergenic 40.0%
TTATCGACCTGTTTCGAGAA+AGG + chr1_2:17909438-17909457 None:intergenic 40.0%
ATATATGCAGCAAGAGGCTT+CGG + chr1_2:17909495-17909514 None:intergenic 40.0%
TACAAACGACAAGAAGCTCA+AGG - chr1_2:17909518-17909537 Msa0060250:intron 40.0%
TGCAAATAGAAGAGCAGTGA+AGG - chr1_2:17909673-17909692 Msa0060250:intron 40.0%
!! CACCAAACCAGCTTTTAAGT+TGG - chr1_2:17909700-17909719 Msa0060250:intron 40.0%
! AGTTGGTTCTCAACAATTCC+TGG - chr1_2:17909717-17909736 Msa0060250:intron 40.0%
AGATTGATGAAGGCTCTCAT+GGG - chr1_2:17910107-17910126 Msa0060250:five_prime_UTR 40.0%
AGTCCTAGAATTCTTTGTCC+TGG - chr1_2:17910168-17910187 Msa0060250:five_prime_UTR 40.0%
GTAAGACTCGAAGCTACGAA+TGG - chr1_2:17899748-17899767 Msa0060250:CDS 45.0%
!! TTCTCAGTTGAAGGCACTTC+TGG - chr1_2:17899776-17899795 Msa0060250:CDS 45.0%
AGCTGAATCCTTCATCCAAG+AGG - chr1_2:17899863-17899882 Msa0060250:intron 45.0%
! ACACTGGAGTACCAGAAGAA+GGG + chr1_2:17900194-17900213 None:intergenic 45.0%
! AACACTGGAGTACCAGAAGA+AGG + chr1_2:17900195-17900214 None:intergenic 45.0%
! GTGGATTGAATGTCATGCCA+CGG - chr1_2:17900611-17900630 Msa0060250:intron 45.0%
GATTTGACTGGGTTTGGGTA+TGG - chr1_2:17900830-17900849 Msa0060250:CDS 45.0%
TTCATAATACGGGTACGGGA+CGG - chr1_2:17900871-17900890 Msa0060250:CDS 45.0%
AGCAACCGGATTATTCGGTA+AGG - chr1_2:17901054-17901073 Msa0060250:intron 45.0%
TTTGATTCATTGTGGGGACG+GGG - chr1_2:17901164-17901183 Msa0060250:CDS 45.0%
GACACGCAATATTGGAGGAA+TGG + chr1_2:17901470-17901489 None:intergenic 45.0%
TGTTGGACACGCAATATTGG+AGG + chr1_2:17901475-17901494 None:intergenic 45.0%
!! GTTTGGTGTGTGACTGTGAT+AGG + chr1_2:17901505-17901524 None:intergenic 45.0%
TTCTTGGAAAGAGGATCGGA+GGG + chr1_2:17902126-17902145 None:intergenic 45.0%
TTTCTTGGAAAGAGGATCGG+AGG + chr1_2:17902127-17902146 None:intergenic 45.0%
CCGAAGTGGTACGGAAAAAA+AGG - chr1_2:17903073-17903092 Msa0060250:intron 45.0%
AAGAGGACAAAGTGTAGGGT+GGG + chr1_2:17904178-17904197 None:intergenic 45.0%
GGTTGAGTTCGTAGAAATGG+AGG + chr1_2:17904237-17904256 None:intergenic 45.0%
TCTCAGTTCATTCACCAGCA+TGG + chr1_2:17904350-17904369 None:intergenic 45.0%
ATAGGCGACAGTTTCAAGAG+GGG + chr1_2:17904500-17904519 None:intergenic 45.0%
CATAGGCGACAGTTTCAAGA+GGG + chr1_2:17904501-17904520 None:intergenic 45.0%
TCATAGGCGACAGTTTCAAG+AGG + chr1_2:17904502-17904521 None:intergenic 45.0%
TCTTGAAACTGTCGCCTATG+AGG - chr1_2:17904501-17904520 Msa0060250:intron 45.0%
AAACTGTCGCCTATGAGGTT+CGG - chr1_2:17904506-17904525 Msa0060250:intron 45.0%
ATGAACTCAGACGAAGGTGA+AGG - chr1_2:17904599-17904618 Msa0060250:intron 45.0%
ACCGTTCAATCTTGACCAAG+TGG - chr1_2:17905412-17905431 Msa0060250:CDS 45.0%
GCCACTTGGTCAAGATTGAA+CGG + chr1_2:17905416-17905435 None:intergenic 45.0%
TTGGAATATCAGTGGCCACT+TGG + chr1_2:17905430-17905449 None:intergenic 45.0%
TGCTAGGTCTTAGGTGTTAG+AGG - chr1_2:17905606-17905625 Msa0060250:intron 45.0%
CAACTTTACCAATTGCGCCA+AGG + chr1_2:17905933-17905952 None:intergenic 45.0%
GTCATGTGACTGAAAGGTCA+CGG - chr1_2:17905955-17905974 Msa0060250:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG - chr1_2:17905956-17905975 Msa0060250:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr1_2:17905989-17906008 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr1_2:17906020-17906039 Msa0060250:intron 45.0%
GCGTACAATACACCAAATGG+TGG - chr1_2:17906023-17906042 Msa0060250:intron 45.0%
ATTGGATGCTTATGAGTGGG+TGG + chr1_2:17906375-17906394 None:intergenic 45.0%
AGATGAGAATGAGATGCCAC+TGG - chr1_2:17906639-17906658 Msa0060250:intron 45.0%
! AGAATGAGATGCCACTGGTT+AGG - chr1_2:17906644-17906663 Msa0060250:intron 45.0%
!! CTTTGATGATGTGCAACCAG+TGG - chr1_2:17906671-17906690 Msa0060250:intron 45.0%
AATTGAATGCACAGGACCAC+TGG + chr1_2:17906690-17906709 None:intergenic 45.0%
AGTGTTAAGGTCCTGTCCAA+GGG + chr1_2:17906781-17906800 None:intergenic 45.0%
! GCTTAGGTTGTTGAAGGGTT+TGG - chr1_2:17907061-17907080 Msa0060250:intron 45.0%
!! ATTGAAGCATTGGATGGCTC+CGG - chr1_2:17907193-17907212 Msa0060250:intron 45.0%
GTGATCAACACAACTCCAAG+TGG + chr1_2:17907280-17907299 None:intergenic 45.0%
! GATTGACATCACTAGCTTGG+AGG + chr1_2:17907469-17907488 None:intergenic 45.0%
TGCGATTGACATCACTAGCT+TGG + chr1_2:17907472-17907491 None:intergenic 45.0%
CAGTTATAGCAGCTCTATCG+CGG + chr1_2:17907633-17907652 None:intergenic 45.0%
! TATTGCAGCTGGTAATGCTG+TGG - chr1_2:17907759-17907778 Msa0060250:intron 45.0%
GTGGCTGGAGAAATTTCTGA+TGG + chr1_2:17907793-17907812 None:intergenic 45.0%
! TTTTGCCAGCAACGATGATG+TGG + chr1_2:17907812-17907831 None:intergenic 45.0%
TCGTTGCTGGCAAAACTGTT+AGG - chr1_2:17907817-17907836 Msa0060250:intron 45.0%
! TTGCACTAGTTCTCCTCAAC+TGG - chr1_2:17908065-17908084 Msa0060250:intron 45.0%
! GCTTTGATCACAGAGTGTTC+AGG - chr1_2:17908095-17908114 Msa0060250:intron 45.0%
AAGAGTGGCACGCATTGTTA+TGG - chr1_2:17908224-17908243 Msa0060250:intron 45.0%
ATTGCAAGGTGGCAACTAGA+AGG - chr1_2:17908553-17908572 Msa0060250:intron 45.0%
GCAACTAGAAGGATAATCGC+TGG - chr1_2:17908564-17908583 Msa0060250:intron 45.0%
GAAGGATAATCGCTGGAAAG+TGG - chr1_2:17908571-17908590 Msa0060250:intron 45.0%
AGGATAATCGCTGGAAAGTG+GGG - chr1_2:17908573-17908592 Msa0060250:intron 45.0%
! GTTTGGTTCCTCCTATTCCT+AGG - chr1_2:17908728-17908747 Msa0060250:intron 45.0%
AGAATCCACCTAGGAATAGG+AGG + chr1_2:17908739-17908758 None:intergenic 45.0%
GCTTTATCAAGCGATCGAAG+TGG + chr1_2:17908839-17908858 None:intergenic 45.0%
!!! CTCCCTGTCTTCTTTTTTGG+AGG - chr1_2:17908928-17908947 Msa0060250:intron 45.0%
GGGACATCCAATAGAACAGT+AGG + chr1_2:17909041-17909060 None:intergenic 45.0%
!! ACCGTGATGATGGGAAGTAA+TGG + chr1_2:17909101-17909120 None:intergenic 45.0%
!! GTTAAGACTGTTTCTGCTGG+TGG - chr1_2:17909549-17909568 Msa0060250:intron 45.0%
TGAATTGCAAGCTGCACCAA+GGG + chr1_2:17909933-17909952 None:intergenic 45.0%
ATGAATTGCAAGCTGCACCA+AGG + chr1_2:17909934-17909953 None:intergenic 45.0%
!! ACTTTGCCTTTTGGAGGAGT+AGG - chr1_2:17909954-17909973 Msa0060250:CDS 45.0%
GAGATTGATGAAGGCTCTCA+TGG - chr1_2:17910106-17910125 Msa0060250:five_prime_UTR 45.0%
!!! AATTTTTTCTTTATTTTAAA+TGG - chr1_2:17900220-17900239 Msa0060250:CDS 5.0%
!!! TTTTAATTTTTTTTTAAAGA+AGG - chr1_2:17902893-17902912 Msa0060250:intron 5.0%
!!! ATTTTTTAAAAAATTAGTTA+CGG + chr1_2:17903464-17903483 None:intergenic 5.0%
!! TAAAAAATATATTGTTTAAA+TGG - chr1_2:17903978-17903997 Msa0060250:intron 5.0%
!!! TTTTTAATAATTTCTATTTT+TGG + chr1_2:17904019-17904038 None:intergenic 5.0%
!!! TTTTTTTTTTTTAATTTTTC+TGG - chr1_2:17904869-17904888 Msa0060250:intron 5.0%
! CACTGGAGTACCAGAAGAAG+GGG + chr1_2:17900193-17900212 None:intergenic 50.0%
GAACATGTGTCACCTCTACG+TGG - chr1_2:17900592-17900611 Msa0060250:intron 50.0%
!! CGTCAAATCGGGGTTGGTTT+GGG + chr1_2:17900800-17900819 None:intergenic 50.0%
! CCAAACCAACCCCGATTTGA+CGG - chr1_2:17900798-17900817 Msa0060250:intron 50.0%
! CAAACCAACCCCGATTTGAC+GGG - chr1_2:17900799-17900818 Msa0060250:intron 50.0%
AAAACCCGTCAAATCGGGGT+TGG + chr1_2:17900806-17900825 None:intergenic 50.0%
TCGCGGAAAACCCGTCAAAT+CGG + chr1_2:17900812-17900831 None:intergenic 50.0%
! GGGTTTTCCGCGATTTGACT+GGG - chr1_2:17900819-17900838 Msa0060250:intron 50.0%
TTCCGCGATTTGACTGGGTT+TGG - chr1_2:17900824-17900843 Msa0060250:intron 50.0%
TCCGCGATTTGACTGGGTTT+GGG - chr1_2:17900825-17900844 Msa0060250:intron 50.0%
ACCCAAACCCAGTCAAATCG+CGG + chr1_2:17900829-17900848 None:intergenic 50.0%
TCTACATTCGGGGAGGGTTT+GGG + chr1_2:17900932-17900951 None:intergenic 50.0%
TTCTACATTCGGGGAGGGTT+TGG + chr1_2:17900933-17900952 None:intergenic 50.0%
AACCCTCCCCGAATGTAGAA+AGG - chr1_2:17900933-17900952 Msa0060250:CDS 50.0%
GACCTTTCTACATTCGGGGA+GGG + chr1_2:17900938-17900957 None:intergenic 50.0%
TGACCTTTCTACATTCGGGG+AGG + chr1_2:17900939-17900958 None:intergenic 50.0%
TTTCTGATCCCCGTTGGGTA+TGG - chr1_2:17901234-17901253 Msa0060250:intron 50.0%
TTCTGATCCCCGTTGGGTAT+GGG - chr1_2:17901235-17901254 Msa0060250:intron 50.0%
ATACCCTACCCATACCCAAC+GGG + chr1_2:17901246-17901265 None:intergenic 50.0%
GATACCCTACCCATACCCAA+CGG + chr1_2:17901247-17901266 None:intergenic 50.0%
GTTGGGTATGGGTAGGGTAT+CGG - chr1_2:17901246-17901265 Msa0060250:intron 50.0%
! TTGGGTATGGGTAGGGTATC+GGG - chr1_2:17901247-17901266 Msa0060250:intron 50.0%
!! TATGGGTAGGGTATCGGGTA+GGG - chr1_2:17901252-17901271 Msa0060250:intron 50.0%
CGTTAGTAGGCATGGCAATG+GGG + chr1_2:17901315-17901334 None:intergenic 50.0%
CCGTTAGTAGGCATGGCAAT+GGG + chr1_2:17901316-17901335 None:intergenic 50.0%
CCCATTGCCATGCCTACTAA+CGG - chr1_2:17901313-17901332 Msa0060250:intron 50.0%
ACCGTTAGTAGGCATGGCAA+TGG + chr1_2:17901317-17901336 None:intergenic 50.0%
GCAATATTGGAGGAATGGCG+TGG + chr1_2:17901465-17901484 None:intergenic 50.0%
TGGTGTGTGACTGTGATAGG+AGG + chr1_2:17901502-17901521 None:intergenic 50.0%
AGTCACACACCAAACCCAAC+CGG - chr1_2:17901510-17901529 Msa0060250:CDS 50.0%
TGTATACATCCCTGATCCCC+CGG + chr1_2:17901532-17901551 None:intergenic 50.0%
GAAGAGGACAAAGTGTAGGG+TGG + chr1_2:17904179-17904198 None:intergenic 50.0%
TAGGCGACAGTTTCAAGAGG+GGG + chr1_2:17904499-17904518 None:intergenic 50.0%
TGGTGTGTGTACTGTTCGGT+GGG - chr1_2:17904889-17904908 Msa0060250:intron 50.0%
GTGGGGAATCCACAACTACT+AGG - chr1_2:17905460-17905479 Msa0060250:intron 50.0%
TGTTCGGTCATAGGTCTGAG+AGG - chr1_2:17905686-17905705 Msa0060250:intron 50.0%
GCACTACTAAAAGGGCAACC+CGG + chr1_2:17906090-17906109 None:intergenic 50.0%
GCAGTGACCCTCGTACTTAA+TGG - chr1_2:17906474-17906493 Msa0060250:intron 50.0%
CCAGAGGCCATTAAGTACGA+GGG + chr1_2:17906484-17906503 None:intergenic 50.0%
ACCAGAGGCCATTAAGTACG+AGG + chr1_2:17906485-17906504 None:intergenic 50.0%
GAGTGTTAAGGTCCTGTCCA+AGG + chr1_2:17906782-17906801 None:intergenic 50.0%
GCTGCAATAGCCCCAATTAC+TGG + chr1_2:17907748-17907767 None:intergenic 50.0%
GTAATTGGGGCTATTGCAGC+TGG - chr1_2:17907748-17907767 Msa0060250:intron 50.0%
GGAAAGTGGGGTTGCAACAA+TGG - chr1_2:17908585-17908604 Msa0060250:intron 50.0%
TGGTTCCTCCTATTCCTAGG+TGG - chr1_2:17908731-17908750 Msa0060250:intron 50.0%
AACAGTAGGGCTAATCCTCC+TGG + chr1_2:17909027-17909046 None:intergenic 50.0%
!! GACTGTTTCTGCTGGTGGTT+TGG - chr1_2:17909554-17909573 Msa0060250:intron 50.0%
CTCTCACCTACTCCTCCAAA+AGG + chr1_2:17909963-17909982 None:intergenic 50.0%
TTTGGAGGAGTAGGTGAGAG+TGG - chr1_2:17909963-17909982 Msa0060250:CDS 50.0%
TTGATGAAGGCTCTCATGGG+TGG - chr1_2:17910110-17910129 Msa0060250:five_prime_UTR 50.0%
GCAACAAAACCCGTGCCCAT+GGG - chr1_2:17900768-17900787 Msa0060250:intron 55.0%
! TGGTTTGGGCAGGTACCCAT+GGG + chr1_2:17900786-17900805 None:intergenic 55.0%
!! TTGGTTTGGGCAGGTACCCA+TGG + chr1_2:17900787-17900806 None:intergenic 55.0%
!! AAATCGGGGTTGGTTTGGGC+AGG + chr1_2:17900796-17900815 None:intergenic 55.0%
!! CCGTCAAATCGGGGTTGGTT+TGG + chr1_2:17900801-17900820 None:intergenic 55.0%
GCGGAAAACCCGTCAAATCG+GGG + chr1_2:17900810-17900829 None:intergenic 55.0%
CGCGGAAAACCCGTCAAATC+GGG + chr1_2:17900811-17900830 None:intergenic 55.0%
! CGGGTTTTCCGCGATTTGAC+TGG - chr1_2:17900818-17900837 Msa0060250:intron 55.0%
TACGGGTACGGGACGGATAA+CGG - chr1_2:17900878-17900897 Msa0060250:CDS 55.0%
TTTGGGTATGGGTTCGGGGT+GGG + chr1_2:17900915-17900934 None:intergenic 55.0%
AGGGTTTGGGTATGGGTTCG+GGG + chr1_2:17900919-17900938 None:intergenic 55.0%
GAGGGTTTGGGTATGGGTTC+GGG + chr1_2:17900920-17900939 None:intergenic 55.0%
GGAGGGTTTGGGTATGGGTT+CGG + chr1_2:17900921-17900940 None:intergenic 55.0%
TTCGGGGAGGGTTTGGGTAT+GGG + chr1_2:17900926-17900945 None:intergenic 55.0%
ATTCGGGGAGGGTTTGGGTA+TGG + chr1_2:17900927-17900946 None:intergenic 55.0%
ATTCATTGTGGGGACGGGGA+TGG - chr1_2:17901168-17901187 Msa0060250:CDS 55.0%
TTCATTGTGGGGACGGGGAT+GGG - chr1_2:17901169-17901188 Msa0060250:CDS 55.0%
CGGGAATACCCGAACCCATT+GGG - chr1_2:17901193-17901212 Msa0060250:intron 55.0%
GGGAATACCCGAACCCATTG+GGG - chr1_2:17901194-17901213 Msa0060250:intron 55.0%
ATACCCGAACCCATTGGGGA+CGG - chr1_2:17901198-17901217 Msa0060250:intron 55.0%
ATCTCATCCCCGTCCCCAAT+GGG + chr1_2:17901210-17901229 None:intergenic 55.0%
AATCTCATCCCCGTCCCCAA+TGG + chr1_2:17901211-17901230 None:intergenic 55.0%
ATCCCCGTTGGGTATGGGTA+GGG - chr1_2:17901240-17901259 Msa0060250:intron 55.0%
TACCCTACCCATACCCAACG+GGG + chr1_2:17901245-17901264 None:intergenic 55.0%
!! GTATGGGTAGGGTATCGGGT+AGG - chr1_2:17901251-17901270 Msa0060250:intron 55.0%
!! ATGGGTAGGGTATCGGGTAG+GGG - chr1_2:17901253-17901272 Msa0060250:intron 55.0%
!! TAGGGTATCGGGTAGGGGAT+AGG - chr1_2:17901258-17901277 Msa0060250:intron 55.0%
!! AGGGTATCGGGTAGGGGATA+GGG - chr1_2:17901259-17901278 Msa0060250:intron 55.0%
TATCGGGTAGGGGATAGGGA+TGG - chr1_2:17901263-17901282 Msa0060250:intron 55.0%
ATCGGGTAGGGGATAGGGAT+GGG - chr1_2:17901264-17901283 Msa0060250:intron 55.0%
TAGTAGGCATGGCAATGGGG+CGG + chr1_2:17901312-17901331 None:intergenic 55.0%
GTCACACACCAAACCCAACC+GGG - chr1_2:17901511-17901530 Msa0060250:CDS 55.0%
TCACACACCAAACCCAACCG+GGG - chr1_2:17901512-17901531 Msa0060250:CDS 55.0%
! TGTGATGAGGGTGGTACTGG+TGG + chr1_2:17904155-17904174 None:intergenic 55.0%
GTGTAGGGTGGGTGTGATGA+GGG + chr1_2:17904167-17904186 None:intergenic 55.0%
AGTGTAGGGTGGGTGTGATG+AGG + chr1_2:17904168-17904187 None:intergenic 55.0%
CAATGAAGCGGGATCCATGC+TGG - chr1_2:17904333-17904352 Msa0060250:intron 55.0%
CTGGTGTGTGTACTGTTCGG+TGG - chr1_2:17904888-17904907 Msa0060250:intron 55.0%
! GGTGTGTGTACTGTTCGGTG+GGG - chr1_2:17904890-17904909 Msa0060250:intron 55.0%
! GTGTGTGTACTGTTCGGTGG+GGG - chr1_2:17904891-17904910 Msa0060250:intron 55.0%
TGGGGGAAACGTTGCAGTGT+GGG - chr1_2:17904908-17904927 Msa0060250:intron 55.0%
AGGGGTAACCTTGGCGCAAT+TGG - chr1_2:17905922-17905941 Msa0060250:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr1_2:17905968-17905987 Msa0060250:intron 55.0%
CTAGAGCTCCCGCATATGCA+GGG + chr1_2:17906063-17906082 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG + chr1_2:17906064-17906083 None:intergenic 55.0%
CCCTCGTACTTAATGGCCTC+TGG - chr1_2:17906481-17906500 Msa0060250:intron 55.0%
GCATTGGATGGCTCCGGAAA+AGG - chr1_2:17907199-17907218 Msa0060250:intron 55.0%
TCCAGCCACATCATCGTTGC+TGG - chr1_2:17907804-17907823 Msa0060250:intron 55.0%
GCACCTTACACCAGTTGTGC+TGG - chr1_2:17908260-17908279 Msa0060250:intron 55.0%
GCTCCAGCACAACTGGTGTA+AGG + chr1_2:17908266-17908285 None:intergenic 55.0%
ACACCAGTTGTGCTGGAGCT+TGG - chr1_2:17908267-17908286 Msa0060250:intron 55.0%
AGGAGTAGGTGAGAGTGGAG+TGG - chr1_2:17909968-17909987 Msa0060250:CDS 55.0%
GGAGTAGGTGAGAGTGGAGT+GGG - chr1_2:17909969-17909988 Msa0060250:CDS 55.0%
AGTGGAGTGGGTGCATACCA+TGG - chr1_2:17909981-17910000 Msa0060250:CDS 55.0%
ATGAAGGCTCTCATGGGTGG+TGG - chr1_2:17910113-17910132 Msa0060250:five_prime_UTR 55.0%
GGCAACAAAACCCGTGCCCA+TGG - chr1_2:17900767-17900786 Msa0060250:intron 60.0%
ACGGGTACGGGACGGATAAC+GGG - chr1_2:17900879-17900898 Msa0060250:CDS 60.0%
GTTTGGGTATGGGTTCGGGG+TGG + chr1_2:17900916-17900935 None:intergenic 60.0%
TCATTGTGGGGACGGGGATG+GGG - chr1_2:17901170-17901189 Msa0060250:intron 60.0%
GCGGGAATACCCGAACCCAT+TGG - chr1_2:17901192-17901211 Msa0060250:intron 60.0%
TACCCGAACCCATTGGGGAC+GGG - chr1_2:17901199-17901218 Msa0060250:intron 60.0%
! ATCCCCGTCCCCAATGGGTT+CGG + chr1_2:17901205-17901224 None:intergenic 60.0%
GATCCCCGTTGGGTATGGGT+AGG - chr1_2:17901239-17901258 Msa0060250:intron 60.0%
TCGGGTAGGGGATAGGGATG+GGG - chr1_2:17901265-17901284 Msa0060250:intron 60.0%
GTAGGGGATAGGGATGGGGA+AGG - chr1_2:17901269-17901288 Msa0060250:intron 60.0%
AGTAGGCATGGCAATGGGGC+GGG + chr1_2:17901311-17901330 None:intergenic 60.0%
CACACACCAAACCCAACCGG+GGG - chr1_2:17901513-17901532 Msa0060250:CDS 60.0%
CAAACCCAACCGGGGGATCA+GGG - chr1_2:17901520-17901539 Msa0060250:intron 60.0%
ACATCCCTGATCCCCCGGTT+GGG + chr1_2:17901527-17901546 None:intergenic 60.0%
TACATCCCTGATCCCCCGGT+TGG + chr1_2:17901528-17901547 None:intergenic 60.0%
GGGTGTGATGAGGGTGGTAC+TGG + chr1_2:17904158-17904177 None:intergenic 60.0%
TAGGGTGGGTGTGATGAGGG+TGG + chr1_2:17904164-17904183 None:intergenic 60.0%
GTGGGGGAAACGTTGCAGTG+TGG - chr1_2:17904907-17904926 Msa0060250:intron 60.0%
GTGCACGTGAGGGGTAACCT+TGG - chr1_2:17905913-17905932 Msa0060250:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr1_2:17906036-17906055 Msa0060250:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr1_2:17906051-17906070 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr1_2:17906052-17906071 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr1_2:17906051-17906070 Msa0060250:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr1_2:17906052-17906071 Msa0060250:intron 60.0%
AGCGGCTATAGCAGCGCTCT+AGG + chr1_2:17907543-17907562 None:intergenic 60.0%
GCCAGCAACGATGATGTGGC+TGG + chr1_2:17907808-17907827 None:intergenic 60.0%
CCTCCAAGCTCCAGCACAAC+TGG + chr1_2:17908273-17908292 None:intergenic 60.0%
CCAGTTGTGCTGGAGCTTGG+AGG - chr1_2:17908270-17908289 Msa0060250:intron 60.0%
TGGGCAGGTACCCATGGGCA+CGG + chr1_2:17900781-17900800 None:intergenic 65.0%
CGGGTACGGGACGGATAACG+GGG - chr1_2:17900880-17900899 Msa0060250:CDS 65.0%
ACCCGAACCCATTGGGGACG+GGG - chr1_2:17901200-17901219 Msa0060250:intron 65.0%
! TCCCCGTCCCCAATGGGTTC+GGG + chr1_2:17901204-17901223 None:intergenic 65.0%
CATGGCAATGGGGCGGGATG+GGG + chr1_2:17901305-17901324 None:intergenic 65.0%
GCATGGCAATGGGGCGGGAT+GGG + chr1_2:17901306-17901325 None:intergenic 65.0%
CCTGATCCCCCGGTTGGGTT+TGG + chr1_2:17901522-17901541 None:intergenic 65.0%
CCAAACCCAACCGGGGGATC+AGG - chr1_2:17901519-17901538 Msa0060250:intron 65.0%
!! GAGGGTGGTACTGGTGGTGC+AGG + chr1_2:17904149-17904168 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr1_2:17906038-17906057 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr1_2:17906053-17906072 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr1_2:17906057-17906076 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr1_2:17906058-17906077 None:intergenic 65.0%
! ATGCGGGAGCTCTAGTGCGC+CGG - chr1_2:17906068-17906087 Msa0060250:intron 65.0%
GGGCAGGTACCCATGGGCAC+GGG + chr1_2:17900780-17900799 None:intergenic 70.0%
TTGTGGGGACGGGGATGGGG+CGG - chr1_2:17901173-17901192 Msa0060250:intron 70.0%
GGCATGGCAATGGGGCGGGA+TGG + chr1_2:17901307-17901326 None:intergenic 70.0%
! TGCGGGAGCTCTAGTGCGCC+GGG - chr1_2:17906069-17906088 Msa0060250:intron 70.0%
TGTGGGGACGGGGATGGGGC+GGG - chr1_2:17901174-17901193 Msa0060250:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 17899384 17910365 17899384 ID=Msa0060250;Name=Msa0060250
chr1_2 mRNA 17899384 17910365 17899384 ID=Msa0060250-mRNA-1;Parent=Msa0060250;Name=Msa0060250-mRNA-1;_AED=0.16;_eAED=0.16;_QI=276|0.72|0.66|1|0.81|0.75|12|0|551
chr1_2 exon 17899384 17899408 17899384 ID=Msa0060250-mRNA-1:exon:6976;Parent=Msa0060250-mRNA-1
chr1_2 exon 17899581 17899807 17899581 ID=Msa0060250-mRNA-1:exon:6975;Parent=Msa0060250-mRNA-1
chr1_2 exon 17900150 17900299 17900150 ID=Msa0060250-mRNA-1:exon:6974;Parent=Msa0060250-mRNA-1
chr1_2 exon 17900631 17900721 17900631 ID=Msa0060250-mRNA-1:exon:6973;Parent=Msa0060250-mRNA-1
chr1_2 exon 17900827 17900999 17900827 ID=Msa0060250-mRNA-1:exon:6972;Parent=Msa0060250-mRNA-1
chr1_2 exon 17901084 17901188 17901084 ID=Msa0060250-mRNA-1:exon:6971;Parent=Msa0060250-mRNA-1
chr1_2 exon 17901417 17901532 17901417 ID=Msa0060250-mRNA-1:exon:6970;Parent=Msa0060250-mRNA-1
chr1_2 exon 17901812 17901982 17901812 ID=Msa0060250-mRNA-1:exon:6969;Parent=Msa0060250-mRNA-1
chr1_2 exon 17902332 17902428 17902332 ID=Msa0060250-mRNA-1:exon:6968;Parent=Msa0060250-mRNA-1
chr1_2 exon 17902529 17902597 17902529 ID=Msa0060250-mRNA-1:exon:6967;Parent=Msa0060250-mRNA-1
chr1_2 exon 17905227 17905433 17905227 ID=Msa0060250-mRNA-1:exon:6966;Parent=Msa0060250-mRNA-1
chr1_2 exon 17909865 17910365 17909865 ID=Msa0060250-mRNA-1:exon:6965;Parent=Msa0060250-mRNA-1
chr1_2 five_prime_UTR 17910090 17910365 17910090 ID=Msa0060250-mRNA-1:five_prime_utr;Parent=Msa0060250-mRNA-1
chr1_2 CDS 17909865 17910089 17909865 ID=Msa0060250-mRNA-1:cds;Parent=Msa0060250-mRNA-1
chr1_2 CDS 17905227 17905433 17905227 ID=Msa0060250-mRNA-1:cds;Parent=Msa0060250-mRNA-1
chr1_2 CDS 17902529 17902597 17902529 ID=Msa0060250-mRNA-1:cds;Parent=Msa0060250-mRNA-1
chr1_2 CDS 17902332 17902428 17902332 ID=Msa0060250-mRNA-1:cds;Parent=Msa0060250-mRNA-1
chr1_2 CDS 17901812 17901982 17901812 ID=Msa0060250-mRNA-1:cds;Parent=Msa0060250-mRNA-1
chr1_2 CDS 17901417 17901532 17901417 ID=Msa0060250-mRNA-1:cds;Parent=Msa0060250-mRNA-1
chr1_2 CDS 17901084 17901188 17901084 ID=Msa0060250-mRNA-1:cds;Parent=Msa0060250-mRNA-1
chr1_2 CDS 17900827 17900999 17900827 ID=Msa0060250-mRNA-1:cds;Parent=Msa0060250-mRNA-1
chr1_2 CDS 17900631 17900721 17900631 ID=Msa0060250-mRNA-1:cds;Parent=Msa0060250-mRNA-1
chr1_2 CDS 17900150 17900299 17900150 ID=Msa0060250-mRNA-1:cds;Parent=Msa0060250-mRNA-1
chr1_2 CDS 17899581 17899807 17899581 ID=Msa0060250-mRNA-1:cds;Parent=Msa0060250-mRNA-1
chr1_2 CDS 17899384 17899408 17899384 ID=Msa0060250-mRNA-1:cds;Parent=Msa0060250-mRNA-1
Gene Sequence

>Msa0060250

ATGGCCTCTTCTAAACTCAACAAAAAAGTGTTTGATTTGGAAGAAGCTTCAACAACAGTTAAAGATTTGAGAATAACGTTTGATTCTGGTAAGACTCGAAGCTACGAATGGAAAGTTTCTCAGTTGAAGGCACTTCTGGAATTAACTGATAAGCATGAGCAAGAGATTGTTGAAGCTCTTTACTCTGACTTATCAAAATCTGAAGCTGAATCCTTCATCCAAGAGAGAAAGAATATGTTCGACAATGAAGCGGGATCCATGCTGGTGAATGAACTGAGACAAACATTTGGTTCTGGAAAAACACGAAGTTATGACTGGAGAGTGTCGCAGTTGAACCAGCTTTTTAAGCTTTTAAACTTTCATGAAAAAGAAATCATTGATGCTCTTCGTAATGATATCGATAAACCCCCTCTTGAAACTGTCGCCTATGAGATTGGTATGTTGAAAAACTCATGTAAAACTGCACTCAAGGAATTGAAGCATTGGATGGCTCCGGAAAAGGTCAAAACATCAATCACAACTTTTCCTTCTTCAGCTGAAATAGTATCTGAACCACTTGGAGTTGTGTTGATCATCTCTGCATGGAACTATCCATTTTCTGGTAATGCTGTGGTCTTAAAACCATCAGAAATTTCTCCAGCCACATCATCGTTGCTGGCAAAACTGTTAGGAGAATACATGGATAACTCATCTATAAGAGTTGTTGAGGGTGCAGTTGATGAAACATCTGTATTACTGCAACAAAAGTGGGACAAAATTTTCTACACAGGCAATGGAAGAGTGGCACGCATTGTTATGGCTGCTGCTGCTAAGCACCTTACACCAGTTGTGCTGGAGCTTGGAGGAAAATCACCAGTTGTTGTTGATTCAAATATCAACTTACAGGTGGCAACTAGAAGGATAATCGCTGGAAAGTGGGGTTGCAACAATGGACAAGCTTGCATTTCTCCAGATTATATCATAACAACAAAAGACTATGCTCCTAAGTTGGTGGATTCTCTAAAGACTGAATTAGAGCAATTTTATGGAAAGAATCAATTGGAATCAAAAGATTTGTCACGTATTGTAAACTCAAACCACTTCGATCGCTTGATAAAGCTTTTGGATGACGACAAAGTTTCTGGTAAGATTGTTCATGGAGGTGAAAAGGATAAAAGCAAATTGAGGATTAGCCCTACTGTTCTATTGGATGTCCCGCGTGATTCTCTGATAATGAGCGAAGAGATATTTGGTCCATTACTTCCCATCATCACGGTCGATAAACTAGATGAAAGCTTTGATGTGATAAATTCAGGACCGAAGCCTCTTGCTGCATATATATTTACAAACGACAAGAAGCTCAAGGAGCATTTTGTTAAGACTGTTTCTGCTGGTGGTTTGGTCATCAATGACACTACTTTACACCTTGCAATTCATACTTTGCCTTTTGGAGGAGTAGGTGAGAGTGGAGTGGGTGCATACCATGGAAAATTCTCATTTGATGCATTTAGCCACAAAAAAGCAGTTCTTTATCGCAGTTTTTTTGGTGATGCTTCTATTAGGTATCCACCATACACCAATACAAAGATGAGATTGATGAAGGCTCTCATGGGTGGTGGCTTACTTGCTATAATTCGTGCCTTATTTGGAAATGGTCATGCTGTTGAGCTGATATAG

Protein sequence

>Msa0060250

MASSKLNKKVFDLEEASTTVKDLRITFDSGKTRSYEWKVSQLKALLELTDKHEQEIVEALYSDLSKSEAESFIQERKNMFDNEAGSMLVNELRQTFGSGKTRSYDWRVSQLNQLFKLLNFHEKEIIDALRNDIDKPPLETVAYEIGMLKNSCKTALKELKHWMAPEKVKTSITTFPSSAEIVSEPLGVVLIISAWNYPFSGNAVVLKPSEISPATSSLLAKLLGEYMDNSSIRVVEGAVDETSVLLQQKWDKIFYTGNGRVARIVMAAAAKHLTPVVLELGGKSPVVVDSNINLQVATRRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDSLKTELEQFYGKNQLESKDLSRIVNSNHFDRLIKLLDDDKVSGKIVHGGEKDKSKLRISPTVLLDVPRDSLIMSEEIFGPLLPIITVDKLDESFDVINSGPKPLAAYIFTNDKKLKEHFVKTVSAGGLVINDTTLHLAIHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRSFFGDASIRYPPYTNTKMRLMKALMGGGLLAIIRALFGNGHAVELI*