Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062900 | sp|Q9LIH7|ZDHC7_ARATH | 46.789 | 327 | 122 | 4 | 18 | 292 | 15 | 341 | 6.95e-103 | 307 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062900 | A0A396JNJ9 | 82.301 | 339 | 13 | 2 | 1 | 292 | 1 | 339 | 0.0 | 558 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013860 | Msa0062900 | 0.838955 | 2.113890e-57 | -8.615850e-47 |
| Msa0062900 | Msa0153770 | 0.808835 | 2.547237e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062900 | MtrunA17_Chr1g0163561 | 82.301 | 339 | 13 | 2 | 1 | 292 | 1 | 339 | 0.0 | 558 |
| Msa0062900 | MtrunA17_Chr4g0037991 | 57.716 | 324 | 91 | 3 | 10 | 287 | 29 | 352 | 3.11e-137 | 392 |
| Msa0062900 | MtrunA17_Chr4g0009911 | 50.704 | 71 | 32 | 1 | 103 | 173 | 103 | 170 | 2.41e-15 | 74.7 |
| Msa0062900 | MtrunA17_Chr1g0199411 | 37.963 | 108 | 59 | 3 | 72 | 173 | 54 | 159 | 5.87e-14 | 70.5 |
| Msa0062900 | MtrunA17_Chr4g0011001 | 34.454 | 119 | 73 | 1 | 110 | 228 | 126 | 239 | 3.28e-11 | 62.8 |
| Msa0062900 | MtrunA17_Chr5g0406311 | 41.270 | 63 | 37 | 0 | 111 | 173 | 170 | 232 | 3.43e-11 | 63.2 |
| Msa0062900 | MtrunA17_Chr7g0255161 | 30.864 | 162 | 77 | 6 | 110 | 262 | 91 | 226 | 4.01e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062900 | AT3G18620.1 | 46.789 | 327 | 122 | 4 | 18 | 292 | 15 | 341 | 7.06e-104 | 307 |
| Msa0062900 | AT3G09320.1 | 35.333 | 150 | 70 | 5 | 103 | 252 | 94 | 216 | 3.36e-14 | 71.6 |
| Msa0062900 | AT4G22750.1 | 35.385 | 130 | 77 | 2 | 99 | 226 | 106 | 230 | 1.16e-13 | 70.5 |
| Msa0062900 | AT5G05070.1 | 29.870 | 154 | 82 | 5 | 110 | 263 | 172 | 299 | 1.16e-13 | 71.2 |
| Msa0062900 | AT3G56920.1 | 31.373 | 153 | 79 | 4 | 110 | 262 | 143 | 269 | 1.60e-12 | 67.4 |
| Msa0062900 | AT5G04270.1 | 44.444 | 63 | 35 | 0 | 111 | 173 | 94 | 156 | 4.31e-12 | 65.5 |
| Msa0062900 | AT2G40990.1 | 27.473 | 182 | 102 | 6 | 110 | 288 | 161 | 315 | 2.56e-11 | 64.3 |
| Msa0062900 | AT4G00840.2 | 50.000 | 50 | 25 | 0 | 102 | 151 | 104 | 153 | 4.30e-11 | 62.0 |
| Msa0062900 | AT3G56930.1 | 35.165 | 91 | 52 | 2 | 82 | 168 | 118 | 205 | 5.54e-11 | 63.2 |
| Msa0062900 | AT3G60800.1 | 33.333 | 117 | 73 | 1 | 110 | 226 | 128 | 239 | 9.83e-11 | 62.0 |
| Msa0062900 | AT4G00840.1 | 47.170 | 53 | 28 | 0 | 99 | 151 | 101 | 153 | 9.85e-11 | 61.6 |
Find 63 sgRNAs with CRISPR-Local
Find 459 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACTCCCTCGGACGCTTAA+AGG | 0.183327 | 1_2:+22828072 | Msa0062900:CDS |
| TAGCTTCCCCATAATATATT+TGG | 0.224116 | 1_2:-22826423 | None:intergenic |
| GAACACCACCAAATATATTA+TGG | 0.225012 | 1_2:+22826415 | Msa0062900:CDS |
| TATATGCTAGCATGCATATT+TGG | 0.260054 | 1_2:+22828038 | Msa0062900:CDS |
| CTCTCCACCCGAAGCACTTT+TGG | 0.274106 | 1_2:-22824615 | None:intergenic |
| CTTCGTTTGCTTCCTCATTT+CGG | 0.338629 | 1_2:+22827979 | Msa0062900:CDS |
| ACACCAACCACATTTGAATA+TGG | 0.339245 | 1_2:-22824557 | None:intergenic |
| AACGCGTGTGTGTGTTTACC+TGG | 0.394037 | 1_2:-22822139 | None:intergenic |
| AACACCACCAAATATATTAT+GGG | 0.394441 | 1_2:+22826416 | Msa0062900:CDS |
| GAAATTGAGAGTGTCGATTT+CGG | 0.409805 | 1_2:-22822183 | None:intergenic |
| AACGCGACCAAAAGTGCTTC+GGG | 0.415108 | 1_2:+22824608 | Msa0062900:CDS |
| AATCACATATAGGAGCAATA+TGG | 0.432779 | 1_2:+22824460 | Msa0062900:intron |
| GCGAGTGTTTCATTGCAGAT+AGG | 0.447344 | 1_2:+22828208 | Msa0062900:CDS |
| GAGACAACCTGCTGGGGTTG+TGG | 0.454554 | 1_2:+22824505 | Msa0062900:CDS |
| TACTCCCTCGGACGCTTAAA+GGG | 0.462436 | 1_2:+22828073 | Msa0062900:CDS |
| AAACGCGACCAAAAGTGCTT+CGG | 0.465814 | 1_2:+22824607 | Msa0062900:CDS |
| CGGAAAATGTATACTGGACA+TGG | 0.471242 | 1_2:+22826539 | Msa0062900:CDS |
| CTTGCAGCATTTAGGTGTGC+TGG | 0.481835 | 1_2:+22826393 | Msa0062900:intron |
| TTCATGCGGAAAATGTATAC+TGG | 0.483089 | 1_2:+22826533 | Msa0062900:CDS |
| TGATGTGCTCTAGGTGACTT+TGG | 0.487243 | 1_2:-22826504 | None:intergenic |
| GCTTAAAGGGTATGACTGGC+CGG | 0.495021 | 1_2:+22828086 | Msa0062900:CDS |
| CTTCCCCATAATATATTTGG+TGG | 0.506867 | 1_2:-22826420 | None:intergenic |
| GAGGTCACCTTGCCCTACCG+TGG | 0.513800 | 1_2:-22826448 | None:intergenic |
| AGGAGAAGAAGAAGAAGCCA+TGG | 0.531669 | 1_2:-22822205 | None:intergenic |
| GGACGCTTAAAGGGTATGAC+TGG | 0.532460 | 1_2:+22828082 | Msa0062900:CDS |
| AGCTACCCCACGGTAGGGCA+AGG | 0.533042 | 1_2:+22826441 | Msa0062900:CDS |
| AGGTCACCTTGCCCTACCGT+GGG | 0.535258 | 1_2:-22826447 | None:intergenic |
| ATCGACACTCTCAATTTCCA+TGG | 0.535306 | 1_2:+22822188 | Msa0062900:exon |
| TGCTCAGCACTGCCGAAATG+AGG | 0.539557 | 1_2:-22827991 | None:intergenic |
| TGGCAGATTGGCAACTGTGT+GGG | 0.550063 | 1_2:+22827938 | Msa0062900:intron |
| TAATTATGAGACAACCTGCT+GGG | 0.551035 | 1_2:+22824498 | Msa0062900:CDS |
| TTCTTCTTCTTCTCCTCACG+AGG | 0.553010 | 1_2:+22822212 | Msa0062900:CDS |
| ACATTTGAATATGGATGCAC+CGG | 0.555614 | 1_2:-22824548 | None:intergenic |
| GCGAAGTCCACAACCCCAGC+AGG | 0.560586 | 1_2:-22824512 | None:intergenic |
| CTTAAAGGGTATGACTGGCC+GGG | 0.561212 | 1_2:+22828087 | Msa0062900:CDS |
| ATAATTATGAGACAACCTGC+TGG | 0.564546 | 1_2:+22824497 | Msa0062900:CDS |
| CTTCGCGTTATGCTTCCATC+CGG | 0.565639 | 1_2:+22824529 | Msa0062900:CDS |
| TTGAATATGGATGCACCGGA+TGG | 0.567232 | 1_2:-22824544 | None:intergenic |
| CCACCATTGTCATACTCCCT+CGG | 0.568831 | 1_2:+22828061 | Msa0062900:CDS |
| TAAGTCTCCATGCTAGATCC+CGG | 0.577695 | 1_2:-22828105 | None:intergenic |
| GAACGACAATGATGTGCTCT+AGG | 0.583530 | 1_2:-22826513 | None:intergenic |
| TGACTGGCCGGGATCTAGCA+TGG | 0.593847 | 1_2:+22828098 | Msa0062900:CDS |
| TCATACCCTTTAAGCGTCCG+AGG | 0.598416 | 1_2:-22828078 | None:intergenic |
| TGGGGAAGCTACCCCACGGT+AGG | 0.603154 | 1_2:+22826435 | Msa0062900:CDS |
| TTGGCAGATTGGCAACTGTG+TGG | 0.604212 | 1_2:+22827937 | Msa0062900:intron |
| TAGGAGCAATATGGAACTGA+GGG | 0.616913 | 1_2:+22824469 | Msa0062900:intron |
| CATCCATATTCAAATGTGGT+TGG | 0.621569 | 1_2:+22824554 | Msa0062900:CDS |
| GGGGAAGCTACCCCACGGTA+GGG | 0.622081 | 1_2:+22826436 | Msa0062900:CDS |
| GCACATCATTGTCGTTCATG+CGG | 0.626648 | 1_2:+22826519 | Msa0062900:CDS |
| ACACCACCAAATATATTATG+GGG | 0.627205 | 1_2:+22826417 | Msa0062900:CDS |
| ACGCGTGTGTGTGTTTACCT+GGG | 0.632697 | 1_2:-22822138 | None:intergenic |
| AAACAGCGTAGATCTCAAGA+AGG | 0.634753 | 1_2:-22828146 | None:intergenic |
| ATATTCAAATGTGGTTGGTG+TGG | 0.638886 | 1_2:+22824559 | Msa0062900:CDS |
| ATAGGAGCAATATGGAACTG+AGG | 0.650745 | 1_2:+22824468 | Msa0062900:intron |
| CCGAGGGAGTATGACAATGG+TGG | 0.659728 | 1_2:-22828061 | None:intergenic |
| CATACCCTTTAAGCGTCCGA+GGG | 0.660431 | 1_2:-22828077 | None:intergenic |
| CGTCCGAGGGAGTATGACAA+TGG | 0.661120 | 1_2:-22828064 | None:intergenic |
| GGTGCATCCATATTCAAATG+TGG | 0.668516 | 1_2:+22824550 | Msa0062900:CDS |
| GCGACCAAAAGTGCTTCGGG+TGG | 0.675339 | 1_2:+22824611 | Msa0062900:CDS |
| AATTATGAGACAACCTGCTG+GGG | 0.682923 | 1_2:+22824499 | Msa0062900:CDS |
| TAGATGGAACAAACCTCGTG+AGG | 0.699163 | 1_2:-22822225 | None:intergenic |
| GGTCACCTTGCCCTACCGTG+GGG | 0.699639 | 1_2:-22826446 | None:intergenic |
| ATTATGGGGAAGCTACCCCA+CGG | 0.740734 | 1_2:+22826431 | Msa0062900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTCGTTTTTTTTTTT+TGG | + | chr1_2:22822315-22822334 | Msa0062900:intron | 10.0% |
| !!! | TATTTTTTTTATTGTGATTA+AGG | + | chr1_2:22822534-22822553 | Msa0062900:intron | 10.0% |
| !!! | TACATAATATTTTAAATCAA+AGG | - | chr1_2:22824170-22824189 | None:intergenic | 10.0% |
| !! | AATTTATACAAAATTCAAAT+TGG | + | chr1_2:22824820-22824839 | Msa0062900:intron | 10.0% |
| !! | ATTTATACAAAATTCAAATT+GGG | + | chr1_2:22824821-22824840 | Msa0062900:intron | 10.0% |
| !!! | AGTTTTATTATTGAAAAATA+AGG | - | chr1_2:22826671-22826690 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTTTGAG+GGG | - | chr1_2:22826705-22826724 | None:intergenic | 10.0% |
| !! | TACATATGAATTTATCAATT+TGG | - | chr1_2:22822867-22822886 | None:intergenic | 15.0% |
| !! | TTTATAAAATAAGTCTAAAG+CGG | + | chr1_2:22822927-22822946 | Msa0062900:intron | 15.0% |
| !!! | TGCTATATTTGTTATATTAT+CGG | - | chr1_2:22823686-22823705 | None:intergenic | 15.0% |
| !! | AATCTATAACAATATGTAAA+GGG | - | chr1_2:22823815-22823834 | None:intergenic | 15.0% |
| !! | TAATCTATAACAATATGTAA+AGG | - | chr1_2:22823816-22823835 | None:intergenic | 15.0% |
| !! | ATTAAATGAAATGATTGTTA+AGG | + | chr1_2:22823874-22823893 | Msa0062900:intron | 15.0% |
| !! | TTAAATGAAATGATTGTTAA+GGG | + | chr1_2:22823875-22823894 | Msa0062900:intron | 15.0% |
| !! | AAATCCCTTAAAATAAAAAT+TGG | + | chr1_2:22825048-22825067 | Msa0062900:intron | 15.0% |
| !!! | ATAGAAAGTATAATGTTATA+AGG | - | chr1_2:22825841-22825860 | None:intergenic | 15.0% |
| !!! | ATTTTTATTTTTTTTGCAGT+TGG | + | chr1_2:22826261-22826280 | Msa0062900:intron | 15.0% |
| !! | AAAATGATGAGAAAAGAAAA+GGG | - | chr1_2:22822256-22822275 | None:intergenic | 20.0% |
| !! | AAAAATGATGAGAAAAGAAA+AGG | - | chr1_2:22822257-22822276 | None:intergenic | 20.0% |
| !! | ATTTAAGCATTAAGAAACAA+AGG | - | chr1_2:22822289-22822308 | None:intergenic | 20.0% |
| !!! | TTATCTATTCCTTCAATTTT+GGG | + | chr1_2:22822369-22822388 | Msa0062900:intron | 20.0% |
| !! | TGTCATTCAATAACAATTAT+TGG | + | chr1_2:22822645-22822664 | Msa0062900:intron | 20.0% |
| !! | GTCATTCAATAACAATTATT+GGG | + | chr1_2:22822646-22822665 | Msa0062900:intron | 20.0% |
| !! | TATGAATTTATCAATTTGGT+AGG | - | chr1_2:22822863-22822882 | None:intergenic | 20.0% |
| !! | AACAAACTAAGCAAAAATTT+GGG | - | chr1_2:22823317-22823336 | None:intergenic | 20.0% |
| !! | TAACAAACTAAGCAAAAATT+TGG | - | chr1_2:22823318-22823337 | None:intergenic | 20.0% |
| !!! | GCTAAATATATTTTTAGGAT+TGG | + | chr1_2:22823437-22823456 | Msa0062900:intron | 20.0% |
| !!! | GCACAATATATCATTTTTAT+AGG | + | chr1_2:22823731-22823750 | Msa0062900:intron | 20.0% |
| !!! | TTTATAGGCAAATTTGTTTA+AGG | + | chr1_2:22823746-22823765 | Msa0062900:intron | 20.0% |
| !!! | TTATAGGCAAATTTGTTTAA+GGG | + | chr1_2:22823747-22823766 | Msa0062900:intron | 20.0% |
| !! | ATCTATAACAATATGTAAAG+GGG | - | chr1_2:22823814-22823833 | None:intergenic | 20.0% |
| !! | TAAATGAAATGATTGTTAAG+GGG | + | chr1_2:22823876-22823895 | Msa0062900:intron | 20.0% |
| !!! | AAGTAAATATCTGAAACTAT+AGG | + | chr1_2:22824245-22824264 | Msa0062900:intron | 20.0% |
| !! | CTATAGTTGTTTATTAAACT+CGG | + | chr1_2:22824284-22824303 | Msa0062900:intron | 20.0% |
| !! | TATAGTTGTTTATTAAACTC+GGG | + | chr1_2:22824285-22824304 | Msa0062900:intron | 20.0% |
| !!! | CTTTTTGTTTTGATTTGTAA+TGG | - | chr1_2:22824587-22824606 | None:intergenic | 20.0% |
| !! | ATCCTAACATATATTTGTAA+GGG | - | chr1_2:22824914-22824933 | None:intergenic | 20.0% |
| !! | TTACAAATATATGTTAGGAT+CGG | + | chr1_2:22824914-22824933 | Msa0062900:intron | 20.0% |
| !!! | ATTTTAAGGGATTTATTTAG+TGG | - | chr1_2:22825042-22825061 | None:intergenic | 20.0% |
| !!! | TGGTCCAATTTTTATTTTAA+GGG | - | chr1_2:22825055-22825074 | None:intergenic | 20.0% |
| !!! | TTGGTCCAATTTTTATTTTA+AGG | - | chr1_2:22825056-22825075 | None:intergenic | 20.0% |
| !! | TATAAGTCAAAGCAATTAAA+GGG | - | chr1_2:22825368-22825387 | None:intergenic | 20.0% |
| !! | ATATAAGTCAAAGCAATTAA+AGG | - | chr1_2:22825369-22825388 | None:intergenic | 20.0% |
| !! | TAAAATTATGGGGAAATATA+GGG | - | chr1_2:22825556-22825575 | None:intergenic | 20.0% |
| !! | ATAAAATTATGGGGAAATAT+AGG | - | chr1_2:22825557-22825576 | None:intergenic | 20.0% |
| !! | ACTCCATCATATAAAATTAT+GGG | - | chr1_2:22825567-22825586 | None:intergenic | 20.0% |
| !! | TACTTTCTATCAGTTAAATT+TGG | + | chr1_2:22825851-22825870 | Msa0062900:intron | 20.0% |
| !! | AGATTAATATTATCGTAGTA+AGG | - | chr1_2:22826596-22826615 | None:intergenic | 20.0% |
| !! | ATGATATTACAAAGAAACAA+CGG | - | chr1_2:22826626-22826645 | None:intergenic | 20.0% |
| !! | AAAAAAAAACTCTACCTTAA+AGG | + | chr1_2:22826725-22826744 | Msa0062900:intron | 20.0% |
| !! | AGCTATAACAAGTAATATAT+GGG | - | chr1_2:22826992-22827011 | None:intergenic | 20.0% |
| !! | AAGCTATAACAAGTAATATA+TGG | - | chr1_2:22826993-22827012 | None:intergenic | 20.0% |
| !!! | TAGAAAATCATGTCTTTTTT+AGG | - | chr1_2:22827043-22827062 | None:intergenic | 20.0% |
| !! | TACAAAACAGTTTCTATAAT+GGG | - | chr1_2:22827283-22827302 | None:intergenic | 20.0% |
| !! | CATTTACTGTTTGAATAAAA+TGG | + | chr1_2:22827379-22827398 | Msa0062900:intron | 20.0% |
| !!! | TTTTTTGTCAAGAACTAAAT+TGG | - | chr1_2:22827597-22827616 | None:intergenic | 20.0% |
| !! | ACATCTATATAAAAATGTCA+AGG | - | chr1_2:22827635-22827654 | None:intergenic | 20.0% |
| !! | ACTAATGTAAAAGTTAACAT+TGG | + | chr1_2:22827687-22827706 | Msa0062900:intron | 20.0% |
| !!! | CAAAAAATCTAACAAGATTT+TGG | - | chr1_2:22828339-22828358 | None:intergenic | 20.0% |
| !!! | CAAAATCTTGTTAGATTTTT+TGG | + | chr1_2:22828337-22828356 | Msa0062900:CDS | 20.0% |
| !! | NNNNNNNNTTCTGAGTAACA+CGG | - | chr1_2:22828399-22828418 | None:intergenic | 20.0% |
| !!! | TGATTTTATCACAATACTTA+TGG | + | chr1_2:22828741-22828760 | Msa0062900:intron | 20.0% |
| !! | ATAGAAATAAACAGTAGATT+TGG | - | chr1_2:22828996-22829015 | None:intergenic | 20.0% |
| !!! | AATCTACTGTTTATTTCTAT+TGG | + | chr1_2:22828996-22829015 | Msa0062900:intron | 20.0% |
| !! | CTTATCTATTCCTTCAATTT+TGG | + | chr1_2:22822368-22822387 | Msa0062900:intron | 25.0% |
| ! | GTAAAAGAAAAGATGAGTAA+TGG | + | chr1_2:22822444-22822463 | Msa0062900:intron | 25.0% |
| ! | CATCATGTTAATTCAATAGT+TGG | + | chr1_2:22822506-22822525 | Msa0062900:intron | 25.0% |
| !! | ATTGTGATTAAGGAGATTTT+AGG | + | chr1_2:22822544-22822563 | Msa0062900:intron | 25.0% |
| !!! | ATTAAGGAGATTTTAGGTTA+GGG | + | chr1_2:22822550-22822569 | Msa0062900:intron | 25.0% |
| !!! | TGATATTTGCTATTGTTTTG+AGG | - | chr1_2:22822984-22823003 | None:intergenic | 25.0% |
| !!! | GGGGTTTTTTAAATATTTTC+AGG | - | chr1_2:22823007-22823026 | None:intergenic | 25.0% |
| ! | ATTTATAACCACTGTTCTAT+TGG | - | chr1_2:22823204-22823223 | None:intergenic | 25.0% |
| ! | TTATAAATTAACGTGAGAGA+GGG | + | chr1_2:22823216-22823235 | Msa0062900:intron | 25.0% |
| !! | AAGGGTTTTCAATAAATCAT+TGG | + | chr1_2:22823343-22823362 | Msa0062900:intron | 25.0% |
| !!! | ATTTTTAGGATTGGAATTTC+TGG | + | chr1_2:22823446-22823465 | Msa0062900:intron | 25.0% |
| !!! | TATTTGTTATATTATCGGTG+TGG | - | chr1_2:22823681-22823700 | None:intergenic | 25.0% |
| !! | AATTTGTTTAAGGGCATAAT+CGG | + | chr1_2:22823756-22823775 | Msa0062900:intron | 25.0% |
| ! | AGAAGTTTCCTAAAACTATA+TGG | + | chr1_2:22824115-22824134 | Msa0062900:intron | 25.0% |
| ! | ATAGTTGTTTATTAAACTCG+GGG | + | chr1_2:22824286-22824305 | Msa0062900:intron | 25.0% |
| ! | GCTAGTAGAAGAATTATATA+AGG | - | chr1_2:22824340-22824359 | None:intergenic | 25.0% |
| ! | AAACTGTGGAAAGAAAAAAA+GGG | - | chr1_2:22824408-22824427 | None:intergenic | 25.0% |
| ! | AGGAAAATCAAATCAAATTC+TGG | - | chr1_2:22824751-22824770 | None:intergenic | 25.0% |
| !!! | AATTTGATTTGATTTTCCTC+TGG | + | chr1_2:22824752-22824771 | Msa0062900:intron | 25.0% |
| !!! | ATTTGATTTGATTTTCCTCT+GGG | + | chr1_2:22824753-22824772 | Msa0062900:intron | 25.0% |
| ! | TGTATAAATTCAACCTCAAA+TGG | - | chr1_2:22824810-22824829 | None:intergenic | 25.0% |
| ! | GTTGTTAATATGTAATGCTT+TGG | + | chr1_2:22824867-22824886 | Msa0062900:intron | 25.0% |
| ! | TTCCCTTACAAATATATGTT+AGG | + | chr1_2:22824909-22824928 | Msa0062900:intron | 25.0% |
| ! | GATCCTAACATATATTTGTA+AGG | - | chr1_2:22824915-22824934 | None:intergenic | 25.0% |
| ! | TATGCTATTGCATTGTATAT+GGG | - | chr1_2:22825109-22825128 | None:intergenic | 25.0% |
| ! | TTATGCTATTGCATTGTATA+TGG | - | chr1_2:22825110-22825129 | None:intergenic | 25.0% |
| !! | CACAACAATGGTAATTTTAT+TGG | - | chr1_2:22825194-22825213 | None:intergenic | 25.0% |
| ! | CATGATAATTATCACAACAA+TGG | - | chr1_2:22825206-22825225 | None:intergenic | 25.0% |
| ! | GAATTTATCACATGACATTA+TGG | - | chr1_2:22825308-22825327 | None:intergenic | 25.0% |
| !! | TTCCCCATAATTTTATATGA+TGG | + | chr1_2:22825561-22825580 | Msa0062900:intron | 25.0% |
| ! | CTCCATCATATAAAATTATG+GGG | - | chr1_2:22825566-22825585 | None:intergenic | 25.0% |
| ! | CACTCCATCATATAAAATTA+TGG | - | chr1_2:22825568-22825587 | None:intergenic | 25.0% |
| ! | TTGTCTAAGTAAAAGTAAGA+CGG | - | chr1_2:22825692-22825711 | None:intergenic | 25.0% |
| !! | GATTTTACACAAATAAAGTG+TGG | + | chr1_2:22826019-22826038 | Msa0062900:intron | 25.0% |
| !! | ATGATGCAGTTTTTCATTTT+TGG | - | chr1_2:22826211-22826230 | None:intergenic | 25.0% |
| !!! | TTTATTTTTTTTGCAGTTGG+AGG | + | chr1_2:22826264-22826283 | Msa0062900:intron | 25.0% |
| !!! | TTATTTTTTTTGCAGTTGGA+GGG | + | chr1_2:22826265-22826284 | Msa0062900:intron | 25.0% |
| ! | AACACCACCAAATATATTAT+GGG | + | chr1_2:22826416-22826435 | Msa0062900:CDS | 25.0% |
| ! | ATATTATCGTAGTAAGGTAA+TGG | - | chr1_2:22826590-22826609 | None:intergenic | 25.0% |
| ! | GAACTTTGAATGTAATGATT+GGG | + | chr1_2:22826909-22826928 | Msa0062900:intron | 25.0% |
| !!! | AATCATGTCTTTTTTAGGAA+GGG | - | chr1_2:22827038-22827057 | None:intergenic | 25.0% |
| !!! | AAATCATGTCTTTTTTAGGA+AGG | - | chr1_2:22827039-22827058 | None:intergenic | 25.0% |
| !! | ATTAAAGATTGTGCTGATAA+GGG | + | chr1_2:22827115-22827134 | Msa0062900:intron | 25.0% |
| !!! | AATTAGCTAGAAGTATGTTT+TGG | + | chr1_2:22827164-22827183 | Msa0062900:intron | 25.0% |
| ! | CTACAAAACAGTTTCTATAA+TGG | - | chr1_2:22827284-22827303 | None:intergenic | 25.0% |
| !! | TTTGAAATGTAATATGCTCA+TGG | + | chr1_2:22827328-22827347 | Msa0062900:intron | 25.0% |
| ! | ACACAAAAACTTCTTCAAAA+AGG | - | chr1_2:22827488-22827507 | None:intergenic | 25.0% |
| !!! | CAATAGTTTTATCGAATGAA+AGG | - | chr1_2:22827736-22827755 | None:intergenic | 25.0% |
| !!! | AAAATGGATACTTTTGTTTG+TGG | + | chr1_2:22827845-22827864 | Msa0062900:intron | 25.0% |
| !! | TCATAGCTTTTGTAATTCTT+TGG | + | chr1_2:22827918-22827937 | Msa0062900:intron | 25.0% |
| !! | AGCTCTCTTTTATATATCAA+GGG | + | chr1_2:22828254-22828273 | Msa0062900:CDS | 25.0% |
| ! | TTTGAGAAAAATCTTGATAC+AGG | - | chr1_2:22828373-22828392 | None:intergenic | 25.0% |
| !! | GCTTATAGCTTTTAGATTTA+TGG | + | chr1_2:22828594-22828613 | Msa0062900:intron | 25.0% |
| !! | TTTTATCACAATACTTATGG+AGG | + | chr1_2:22828744-22828763 | Msa0062900:intron | 25.0% |
| ! | AAATAAACAGTAGATTTGGA+TGG | - | chr1_2:22828992-22829011 | None:intergenic | 25.0% |
| ! | ATGTTTCACTTGTATATAGA+GGG | + | chr1_2:22829042-22829061 | Msa0062900:intron | 25.0% |
| AAAGAAAAGGGATTGATAGA+TGG | - | chr1_2:22822244-22822263 | None:intergenic | 30.0% | |
| ! | TTAGGTTTTCCCAAAATTGA+AGG | - | chr1_2:22822381-22822400 | None:intergenic | 30.0% |
| !! | ATTTTGGGAAAACCTAAGTT+AGG | + | chr1_2:22822384-22822403 | Msa0062900:intron | 30.0% |
| ! | TCACTACATTTTCCTAACTT+AGG | - | chr1_2:22822399-22822418 | None:intergenic | 30.0% |
| TGTAGTGAATTGATGAGTAA+TGG | + | chr1_2:22822411-22822430 | Msa0062900:intron | 30.0% | |
| !!! | GATTAAGGAGATTTTAGGTT+AGG | + | chr1_2:22822549-22822568 | Msa0062900:intron | 30.0% |
| TAGAGTGATAAGTAGGTTTA+GGG | + | chr1_2:22822575-22822594 | Msa0062900:intron | 30.0% | |
| TATGTTAGTTACGTTGAGAA+CGG | - | chr1_2:22822611-22822630 | None:intergenic | 30.0% | |
| ! | ATAAAATAAGTCTAAAGCGG+TGG | + | chr1_2:22822930-22822949 | Msa0062900:intron | 30.0% |
| !!! | TGTGTCTTTATTTTCTGTTC+TGG | - | chr1_2:22823040-22823059 | None:intergenic | 30.0% |
| GAAGAGTTCATAGTAGAATT+GGG | + | chr1_2:22823121-22823140 | Msa0062900:intron | 30.0% | |
| AGAAAAAACCAATAGAACAG+TGG | + | chr1_2:22823193-22823212 | Msa0062900:intron | 30.0% | |
| GTTATAAATTAACGTGAGAG+AGG | + | chr1_2:22823215-22823234 | Msa0062900:intron | 30.0% | |
| CTAAATTTACCCATAAACTG+TGG | - | chr1_2:22823290-22823309 | None:intergenic | 30.0% | |
| !! | TGCTTAGTTTGTTATTGTGA+AGG | + | chr1_2:22823324-22823343 | Msa0062900:intron | 30.0% |
| !! | GCTTAGTTTGTTATTGTGAA+GGG | + | chr1_2:22823325-22823344 | Msa0062900:intron | 30.0% |
| ! | ATGAACTGTTTCAGAGTTTT+AGG | + | chr1_2:22823382-22823401 | Msa0062900:intron | 30.0% |
| !! | TGTTAGCCTACGTATTTTTA+GGG | + | chr1_2:22823405-22823424 | Msa0062900:intron | 30.0% |
| !!! | CTACGTATTTTTAGGGTTTT+GGG | + | chr1_2:22823412-22823431 | Msa0062900:intron | 30.0% |
| ! | GGGAGGCTAAATATATTTTT+AGG | + | chr1_2:22823432-22823451 | Msa0062900:intron | 30.0% |
| !!! | ATCGTTTCTGTGTTTTTTCA+TGG | + | chr1_2:22823492-22823511 | Msa0062900:intron | 30.0% |
| ! | ATTGGGTTAGAATTGAATTC+TGG | - | chr1_2:22823536-22823555 | None:intergenic | 30.0% |
| TTGCAAAATCATTTGATCCT+AGG | + | chr1_2:22823581-22823600 | Msa0062900:intron | 30.0% | |
| TGTGGTTGAAAAAGATAACA+TGG | - | chr1_2:22823663-22823682 | None:intergenic | 30.0% | |
| ! | ATTATAGATGATGATGCTGA+TGG | + | chr1_2:22823832-22823851 | Msa0062900:intron | 30.0% |
| ! | GTGAAAGACAAGTTTTTCTT+TGG | + | chr1_2:22823950-22823969 | Msa0062900:intron | 30.0% |
| TTTCATAGCCTAAAAGACAA+TGG | + | chr1_2:22824022-22824041 | Msa0062900:intron | 30.0% | |
| AGTTGTATGGAGAAAGTAAT+TGG | - | chr1_2:22824080-22824099 | None:intergenic | 30.0% | |
| GAAGCAATATGAAAGTTGTA+TGG | - | chr1_2:22824093-22824112 | None:intergenic | 30.0% | |
| TACAGTGTACTCTTCATTTA+GGG | - | chr1_2:22824209-22824228 | None:intergenic | 30.0% | |
| ATACAGTGTACTCTTCATTT+AGG | - | chr1_2:22824210-22824229 | None:intergenic | 30.0% | |
| CAAACTGTGGAAAGAAAAAA+AGG | - | chr1_2:22824409-22824428 | None:intergenic | 30.0% | |
| ! | GCTACATAATTTTCAAACTG+TGG | - | chr1_2:22824422-22824441 | None:intergenic | 30.0% |
| TGAAAATTATGTAGCTTCCT+TGG | + | chr1_2:22824427-22824446 | Msa0062900:intron | 30.0% | |
| TTGCTCTTGTAATCACATAT+AGG | + | chr1_2:22824450-22824469 | Msa0062900:intron | 30.0% | |
| AATCACATATAGGAGCAATA+TGG | + | chr1_2:22824460-22824479 | Msa0062900:intron | 30.0% | |
| AATCAAATTCTGGTCAACAA+GGG | - | chr1_2:22824741-22824760 | None:intergenic | 30.0% | |
| AAATCAAATTCTGGTCAACA+AGG | - | chr1_2:22824742-22824761 | None:intergenic | 30.0% | |
| AATTCAACCTCAAATGGAAA+CGG | - | chr1_2:22824804-22824823 | None:intergenic | 30.0% | |
| AAATTCAAATTGGGAGTTGA+TGG | + | chr1_2:22824830-22824849 | Msa0062900:intron | 30.0% | |
| AAATATATGTTAGGATCGGA+AGG | + | chr1_2:22824918-22824937 | Msa0062900:intron | 30.0% | |
| ! | AACATAATCATTTTCCCACT+AGG | + | chr1_2:22825253-22825272 | Msa0062900:intron | 30.0% |
| TACCTCACAATCTCATTATT+TGG | + | chr1_2:22825412-22825431 | Msa0062900:intron | 30.0% | |
| TTATGAAACCTAAGTCAAGT+TGG | - | chr1_2:22825666-22825685 | None:intergenic | 30.0% | |
| ! | TGTTTCTAAAGGGTTCTTAT+GGG | - | chr1_2:22825789-22825808 | None:intergenic | 30.0% |
| ! | ATGTTTCTAAAGGGTTCTTA+TGG | - | chr1_2:22825790-22825809 | None:intergenic | 30.0% |
| TACACAAATAAAGTGTGGAT+TGG | + | chr1_2:22826024-22826043 | Msa0062900:intron | 30.0% | |
| !! | GCAGTTTTTCATTTTTGGAA+TGG | - | chr1_2:22826206-22826225 | None:intergenic | 30.0% |
| !!! | TATTTTTTTTGCAGTTGGAG+GGG | + | chr1_2:22826266-22826285 | Msa0062900:intron | 30.0% |
| ! | AAAAAAGGAAAGTGTAGCTA+TGG | - | chr1_2:22826370-22826389 | None:intergenic | 30.0% |
| GAACACCACCAAATATATTA+TGG | + | chr1_2:22826415-22826434 | Msa0062900:CDS | 30.0% | |
| ACACCACCAAATATATTATG+GGG | + | chr1_2:22826417-22826436 | Msa0062900:CDS | 30.0% | |
| TAGCTTCCCCATAATATATT+TGG | - | chr1_2:22826426-22826445 | None:intergenic | 30.0% | |
| ! | GACAGAATGTATAATTTTCG+AGG | - | chr1_2:22826470-22826489 | None:intergenic | 30.0% |
| !! | AGGTAATGGAAACTTACAAA+TGG | - | chr1_2:22826576-22826595 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTGAGGGGATTTC+AGG | - | chr1_2:22826697-22826716 | None:intergenic | 30.0% |
| TTACTTAGGAAGTTCCTTTA+AGG | - | chr1_2:22826742-22826761 | None:intergenic | 30.0% | |
| !! | AGGGTATTGTGTTATAGTTA+TGG | + | chr1_2:22826840-22826859 | Msa0062900:intron | 30.0% |
| ! | GGGTATTGTGTTATAGTTAT+GGG | + | chr1_2:22826841-22826860 | Msa0062900:intron | 30.0% |
| GGTATTGTGTTATAGTTATG+GGG | + | chr1_2:22826842-22826861 | Msa0062900:intron | 30.0% | |
| CGAACTTTGAATGTAATGAT+TGG | + | chr1_2:22826908-22826927 | Msa0062900:intron | 30.0% | |
| TAATATATGGGAAAACCATG+AGG | - | chr1_2:22826980-22826999 | None:intergenic | 30.0% | |
| ! | GATTAAAGATTGTGCTGATA+AGG | + | chr1_2:22827114-22827133 | Msa0062900:intron | 30.0% |
| ! | TTAAAGATTGTGCTGATAAG+GGG | + | chr1_2:22827116-22827135 | Msa0062900:intron | 30.0% |
| GCTAATTAAATTATCCTTCC+AGG | - | chr1_2:22827151-22827170 | None:intergenic | 30.0% | |
| !!! | ATGCTGTTTCAGTTTTGAAA+TGG | + | chr1_2:22827508-22827527 | Msa0062900:intron | 30.0% |
| !! | GGTTTTTAAGGGTACATAAA+AGG | - | chr1_2:22827544-22827563 | None:intergenic | 30.0% |
| !!! | AAATTTTGAGGCACCAAAAT+GGG | - | chr1_2:22827565-22827584 | None:intergenic | 30.0% |
| !!! | AAAATTTTGAGGCACCAAAA+TGG | - | chr1_2:22827566-22827585 | None:intergenic | 30.0% |
| ACCTATGAACTGTGTTAAAA+TGG | + | chr1_2:22827829-22827848 | Msa0062900:intron | 30.0% | |
| !! | TCCATTTTAACACAGTTCAT+AGG | - | chr1_2:22827833-22827852 | None:intergenic | 30.0% |
| TTTGTAATTCTTTGGCAGAT+TGG | + | chr1_2:22827926-22827945 | Msa0062900:intron | 30.0% | |
| TATATGCTAGCATGCATATT+TGG | + | chr1_2:22828038-22828057 | Msa0062900:CDS | 30.0% | |
| ! | TAGGATTGAGTGTTCTTTTA+TGG | + | chr1_2:22828227-22828246 | Msa0062900:CDS | 30.0% |
| ! | CAGCTCTCTTTTATATATCA+AGG | + | chr1_2:22828253-22828272 | Msa0062900:CDS | 30.0% |
| AAAAAAGAACAAAACCACAG+TGG | - | chr1_2:22828539-22828558 | None:intergenic | 30.0% | |
| !! | ACTTATGGAGGTTTTAACAT+AGG | + | chr1_2:22828756-22828775 | Msa0062900:intron | 30.0% |
| GTTAATGTTCCATTAGTGTT+TGG | - | chr1_2:22828847-22828866 | None:intergenic | 30.0% | |
| ! | CTAAGTTGAACTTAAACAGA+GGG | - | chr1_2:22828874-22828893 | None:intergenic | 30.0% |
| !!! | GGACATGCAATTTGTTTTAA+GGG | - | chr1_2:22828939-22828958 | None:intergenic | 30.0% |
| !!! | TGGACATGCAATTTGTTTTA+AGG | - | chr1_2:22828940-22828959 | None:intergenic | 30.0% |
| GATGTTTCACTTGTATATAG+AGG | + | chr1_2:22829041-22829060 | Msa0062900:intron | 30.0% | |
| !! | GAAATTGAGAGTGTCGATTT+CGG | - | chr1_2:22822186-22822205 | None:intergenic | 35.0% |
| GTAGAGTGATAAGTAGGTTT+AGG | + | chr1_2:22822574-22822593 | Msa0062900:intron | 35.0% | |
| !!! | GAGGCTTTTAAGATGTTCTT+AGG | - | chr1_2:22822965-22822984 | None:intergenic | 35.0% |
| !!! | GTCTTTATTTTCTGTTCTGG+CGG | - | chr1_2:22823037-22823056 | None:intergenic | 35.0% |
| GGAAGAGTTCATAGTAGAAT+TGG | + | chr1_2:22823120-22823139 | Msa0062900:intron | 35.0% | |
| !! | GTGTTAGCCTACGTATTTTT+AGG | + | chr1_2:22823404-22823423 | Msa0062900:intron | 35.0% |
| CCAAAACCCTAAAAATACGT+AGG | - | chr1_2:22823414-22823433 | None:intergenic | 35.0% | |
| !!! | CCTACGTATTTTTAGGGTTT+TGG | + | chr1_2:22823411-22823430 | Msa0062900:intron | 35.0% |
| GGTTAGAATTGAATTCTGGT+TGG | - | chr1_2:22823532-22823551 | None:intergenic | 35.0% | |
| CTACTTTGTGTGCTTGAATT+GGG | - | chr1_2:22823553-22823572 | None:intergenic | 35.0% | |
| ACTACTTTGTGTGCTTGAAT+TGG | - | chr1_2:22823554-22823573 | None:intergenic | 35.0% | |
| !! | GGTTTGTTACCATTTGAAAG+TGG | - | chr1_2:22823642-22823661 | None:intergenic | 35.0% |
| TAACAATATGTAAAGGGGAC+AGG | - | chr1_2:22823809-22823828 | None:intergenic | 35.0% | |
| TATACCTTGTGTGTATCAGT+TGG | + | chr1_2:22823917-22823936 | Msa0062900:intron | 35.0% | |
| TAATCCAACTGATACACACA+AGG | - | chr1_2:22823924-22823943 | None:intergenic | 35.0% | |
| ! | CTAACATGCCATTGTCTTTT+AGG | - | chr1_2:22824033-22824052 | None:intergenic | 35.0% |
| ! | GGAGAAAGTAATTGGTGTTT+GGG | - | chr1_2:22824072-22824091 | None:intergenic | 35.0% |
| ! | TGGAGAAAGTAATTGGTGTT+TGG | - | chr1_2:22824073-22824092 | None:intergenic | 35.0% |
| TTCCTAAAACTATATGGACG+AGG | + | chr1_2:22824121-22824140 | Msa0062900:intron | 35.0% | |
| ACAGTGTACTCTTCATTTAG+GGG | - | chr1_2:22824208-22824227 | None:intergenic | 35.0% | |
| ATAATTATGAGACAACCTGC+TGG | + | chr1_2:22824497-22824516 | Msa0062900:CDS | 35.0% | |
| TAATTATGAGACAACCTGCT+GGG | + | chr1_2:22824498-22824517 | Msa0062900:CDS | 35.0% | |
| ACATTTGAATATGGATGCAC+CGG | - | chr1_2:22824551-22824570 | None:intergenic | 35.0% | |
| CATCCATATTCAAATGTGGT+TGG | + | chr1_2:22824554-22824573 | Msa0062900:CDS | 35.0% | |
| ACACCAACCACATTTGAATA+TGG | - | chr1_2:22824560-22824579 | None:intergenic | 35.0% | |
| ! | ATATTCAAATGTGGTTGGTG+TGG | + | chr1_2:22824559-22824578 | Msa0062900:CDS | 35.0% |
| GGGTGACAACAAATAAAAGT+AGG | - | chr1_2:22824721-22824740 | None:intergenic | 35.0% | |
| ATTCAACCTCAAATGGAAAC+GGG | - | chr1_2:22824803-22824822 | None:intergenic | 35.0% | |
| TTCATGGCTTCTTTAAGTGT+TGG | - | chr1_2:22825075-22825094 | None:intergenic | 35.0% | |
| ATGGGATAAAGTGATCTTCA+TGG | - | chr1_2:22825091-22825110 | None:intergenic | 35.0% | |
| ATAATGAGATTGTGAGGTAG+AGG | - | chr1_2:22825411-22825430 | None:intergenic | 35.0% | |
| AGCCAAATAATGAGATTGTG+AGG | - | chr1_2:22825417-22825436 | None:intergenic | 35.0% | |
| AATAAGAAACCCTAGTGAGA+AGG | - | chr1_2:22825442-22825461 | None:intergenic | 35.0% | |
| TGTGATAAAGTTTGCCTTTG+AGG | + | chr1_2:22825477-22825496 | Msa0062900:intron | 35.0% | |
| GTGATAAAGTTTGCCTTTGA+GGG | + | chr1_2:22825478-22825497 | Msa0062900:intron | 35.0% | |
| ! | GCATACTAATTCTAGCTAAG+AGG | - | chr1_2:22825641-22825660 | None:intergenic | 35.0% |
| ! | GTTTCTAAAGGGTTCTTATG+GGG | - | chr1_2:22825788-22825807 | None:intergenic | 35.0% |
| ! | ACCATGCTCATGTTTCTAAA+GGG | - | chr1_2:22825799-22825818 | None:intergenic | 35.0% |
| GACATCATAATCCATCACTT+AGG | + | chr1_2:22825873-22825892 | Msa0062900:intron | 35.0% | |
| TCATAATCCATCACTTAGGT+TGG | + | chr1_2:22825877-22825896 | Msa0062900:intron | 35.0% | |
| AATACTACCAACCTAAGTGA+TGG | - | chr1_2:22825887-22825906 | None:intergenic | 35.0% | |
| ! | TTGTCAAGTCTCTTTTCTTG+CGG | + | chr1_2:22825920-22825939 | Msa0062900:intron | 35.0% |
| ! | ATTCAGTGTTCTTGCTATCA+TGG | + | chr1_2:22826152-22826171 | Msa0062900:intron | 35.0% |
| ! | TCTTCTCTGTCAGTCTTTTA+TGG | + | chr1_2:22826310-22826329 | Msa0062900:intron | 35.0% |
| ! | CTTCTCTGTCAGTCTTTTAT+GGG | + | chr1_2:22826311-22826330 | Msa0062900:intron | 35.0% |
| ! | TTCTCTGTCAGTCTTTTATG+GGG | + | chr1_2:22826312-22826331 | Msa0062900:intron | 35.0% |
| AAATGCTGCAAGGCTAAAAA+AGG | - | chr1_2:22826385-22826404 | None:intergenic | 35.0% | |
| !!! | TTTTTAGCCTTGCAGCATTT+AGG | + | chr1_2:22826385-22826404 | Msa0062900:intron | 35.0% |
| CTTCCCCATAATATATTTGG+TGG | - | chr1_2:22826423-22826442 | None:intergenic | 35.0% | |
| TTCATGCGGAAAATGTATAC+TGG | + | chr1_2:22826533-22826552 | Msa0062900:CDS | 35.0% | |
| CAGCTAAGACAATCTTACTT+AGG | - | chr1_2:22826756-22826775 | None:intergenic | 35.0% | |
| GTGTTATAGTTATGGGGTTA+TGG | + | chr1_2:22826848-22826867 | Msa0062900:intron | 35.0% | |
| TTATGGGGTTATGGTTCTTA+AGG | + | chr1_2:22826857-22826876 | Msa0062900:intron | 35.0% | |
| TATGGGGTTATGGTTCTTAA+GGG | + | chr1_2:22826858-22826877 | Msa0062900:intron | 35.0% | |
| AGCTTCTGTTATTCTTGTCT+AGG | + | chr1_2:22826954-22826973 | Msa0062900:intron | 35.0% | |
| ! | AGACATGATTTTCTATACCG+AGG | + | chr1_2:22827048-22827067 | Msa0062900:intron | 35.0% |
| AACTTCTTCAAAAAGGTTCC+AGG | - | chr1_2:22827481-22827500 | None:intergenic | 35.0% | |
| ! | GTACCCTTAAAAACCCATTT+TGG | + | chr1_2:22827549-22827568 | Msa0062900:intron | 35.0% |
| !! | GCACCAAAATGGGTTTTTAA+GGG | - | chr1_2:22827555-22827574 | None:intergenic | 35.0% |
| TCCCTGACTCATTATAAAAG+AGG | + | chr1_2:22827663-22827682 | Msa0062900:intron | 35.0% | |
| ! | CCCTCTTTTATAATGAGTCA+GGG | - | chr1_2:22827667-22827686 | None:intergenic | 35.0% |
| CCCTGACTCATTATAAAAGA+GGG | + | chr1_2:22827664-22827683 | Msa0062900:intron | 35.0% | |
| ! | TCCCTCTTTTATAATGAGTC+AGG | - | chr1_2:22827668-22827687 | None:intergenic | 35.0% |
| TGATTGCAACTATGAAGTCA+AGG | - | chr1_2:22827807-22827826 | None:intergenic | 35.0% | |
| !! | GATACTTTTGTTTGTGGCTA+TGG | + | chr1_2:22827851-22827870 | Msa0062900:intron | 35.0% |
| TGAACAAACTAACCAAGACA+GGG | - | chr1_2:22827901-22827920 | None:intergenic | 35.0% | |
| ATGAACAAACTAACCAAGAC+AGG | - | chr1_2:22827902-22827921 | None:intergenic | 35.0% | |
| AACACTCGCGATAAAAAGAT+AGG | - | chr1_2:22828197-22828216 | None:intergenic | 35.0% | |
| TGAGCTAAGTAGCTCAAAAT+TGG | + | chr1_2:22828681-22828700 | Msa0062900:intron | 35.0% | |
| ! | TAAACCCATTATGCACCTTT+TGG | + | chr1_2:22828784-22828803 | Msa0062900:intron | 35.0% |
| ! | ACATCCAAAAGGTGCATAAT+GGG | - | chr1_2:22828791-22828810 | None:intergenic | 35.0% |
| ! | TACATCCAAAAGGTGCATAA+TGG | - | chr1_2:22828792-22828811 | None:intergenic | 35.0% |
| CTAGTTGAACATGAACAAGA+GGG | - | chr1_2:22828816-22828835 | None:intergenic | 35.0% | |
| ACTAGTTGAACATGAACAAG+AGG | - | chr1_2:22828817-22828836 | None:intergenic | 35.0% | |
| ! | CCTAAGTTGAACTTAAACAG+AGG | - | chr1_2:22828875-22828894 | None:intergenic | 35.0% |
| ! | CCTCTGTTTAAGTTCAACTT+AGG | + | chr1_2:22828872-22828891 | Msa0062900:intron | 35.0% |
| AATTGCATGTCCAAACAATG+AGG | + | chr1_2:22828947-22828966 | Msa0062900:intron | 35.0% | |
| ATTGCATGTCCAAACAATGA+GGG | + | chr1_2:22828948-22828967 | Msa0062900:intron | 35.0% | |
| TAAACAGTAGATTTGGATGG+AGG | - | chr1_2:22828989-22829008 | None:intergenic | 35.0% | |
| ATCGACACTCTCAATTTCCA+TGG | + | chr1_2:22822188-22822207 | Msa0062900:exon | 40.0% | |
| TAGGGAGTAGAGTGATAAGT+AGG | + | chr1_2:22822568-22822587 | Msa0062900:intron | 40.0% | |
| ACGAGATCCTAGGTAAAATC+AGG | + | chr1_2:22822781-22822800 | Msa0062900:intron | 40.0% | |
| CGAGATCCTAGGTAAAATCA+GGG | + | chr1_2:22822782-22822801 | Msa0062900:intron | 40.0% | |
| ATCCTAGGTAAAATCAGGGA+GGG | + | chr1_2:22822786-22822805 | Msa0062900:intron | 40.0% | |
| CACTGAAGTCATTGATGTGA+TGG | + | chr1_2:22823058-22823077 | Msa0062900:intron | 40.0% | |
| TGCAGATTGCACAGAACAAA+GGG | + | chr1_2:22823099-22823118 | Msa0062900:intron | 40.0% | |
| GAGTTCATAGTAGAATTGGG+TGG | + | chr1_2:22823124-22823143 | Msa0062900:intron | 40.0% | |
| TTGAGTAGTGCTACGAATCT+GGG | + | chr1_2:22823241-22823260 | Msa0062900:intron | 40.0% | |
| ! | ATCTGGGTGAATTGTTGCTT+TGG | + | chr1_2:22823257-22823276 | Msa0062900:intron | 40.0% |
| !! | GGTGAATTGTTGCTTTGGTA+AGG | + | chr1_2:22823262-22823281 | Msa0062900:intron | 40.0% |
| !!! | CGTATTTTTAGGGTTTTGGG+AGG | + | chr1_2:22823415-22823434 | Msa0062900:intron | 40.0% |
| AATCATTTGATCCTAGGAGC+AGG | + | chr1_2:22823587-22823606 | Msa0062900:intron | 40.0% | |
| !!! | GATTGCGATTTTGACTACCT+TGG | + | chr1_2:22823609-22823628 | Msa0062900:intron | 40.0% |
| TTGAAAGTGGCAAACATCCA+AGG | - | chr1_2:22823629-22823648 | None:intergenic | 40.0% | |
| !! | GGATGTTTGCCACTTTCAAA+TGG | + | chr1_2:22823630-22823649 | Msa0062900:intron | 40.0% |
| TTTCTTTGGCATCATTGTGC+CGG | + | chr1_2:22823964-22823983 | Msa0062900:intron | 40.0% | |
| AGGCTATGAAACACTAACAC+AGG | - | chr1_2:22824013-22824032 | None:intergenic | 40.0% | |
| ! | GAAAGTAATTGGTGTTTGGG+TGG | - | chr1_2:22824069-22824088 | None:intergenic | 40.0% |
| ! | CTCCTCGTCCATATAGTTTT+AGG | - | chr1_2:22824126-22824145 | None:intergenic | 40.0% |
| ACAGCCATGAAGTAATGACT+GGG | - | chr1_2:22824376-22824395 | None:intergenic | 40.0% | |
| AACAGCCATGAAGTAATGAC+TGG | - | chr1_2:22824377-22824396 | None:intergenic | 40.0% | |
| TGTGATTACAAGAGCAACCA+AGG | - | chr1_2:22824447-22824466 | None:intergenic | 40.0% | |
| ATAGGAGCAATATGGAACTG+AGG | + | chr1_2:22824468-22824487 | Msa0062900:intron | 40.0% | |
| TAGGAGCAATATGGAACTGA+GGG | + | chr1_2:22824469-22824488 | Msa0062900:intron | 40.0% | |
| AATTATGAGACAACCTGCTG+GGG | + | chr1_2:22824499-22824518 | Msa0062900:CDS | 40.0% | |
| GGTGCATCCATATTCAAATG+TGG | + | chr1_2:22824550-22824569 | Msa0062900:CDS | 40.0% | |
| !!! | TTTGATTTTCCTCTGGGACT+AGG | + | chr1_2:22824759-22824778 | Msa0062900:intron | 40.0% |
| TTCAACCTCAAATGGAAACG+GGG | - | chr1_2:22824802-22824821 | None:intergenic | 40.0% | |
| TGCTTTGGTCATAGCAGTTT+AGG | + | chr1_2:22824882-22824901 | Msa0062900:intron | 40.0% | |
| ! | AATCATTTTCCCACTAGGTG+AGG | + | chr1_2:22825258-22825277 | Msa0062900:intron | 40.0% |
| ! | ATTGTGAGGTAGAGGTATAG+GGG | - | chr1_2:22825403-22825422 | None:intergenic | 40.0% |
| ! | GATTGTGAGGTAGAGGTATA+GGG | - | chr1_2:22825404-22825423 | None:intergenic | 40.0% |
| ! | AGATTGTGAGGTAGAGGTAT+AGG | - | chr1_2:22825405-22825424 | None:intergenic | 40.0% |
| ATTTGGCTATCCTTCTCACT+AGG | + | chr1_2:22825429-22825448 | Msa0062900:intron | 40.0% | |
| TTTGGCTATCCTTCTCACTA+GGG | + | chr1_2:22825430-22825449 | Msa0062900:intron | 40.0% | |
| AGAGGCAAACATAGGATTCA+CGG | - | chr1_2:22825533-22825552 | None:intergenic | 40.0% | |
| ATATAGGGAGAGGCAAACAT+AGG | - | chr1_2:22825541-22825560 | None:intergenic | 40.0% | |
| TTATGGGGAAATATAGGGAG+AGG | - | chr1_2:22825551-22825570 | None:intergenic | 40.0% | |
| TACTTAAACAACGAGACTCG+TGG | + | chr1_2:22825592-22825611 | Msa0062900:intron | 40.0% | |
| TCTAGCTAAGAGGTGAAAAC+TGG | - | chr1_2:22825631-22825650 | None:intergenic | 40.0% | |
| GTATGCTTCCAACTTGACTT+AGG | + | chr1_2:22825655-22825674 | Msa0062900:intron | 40.0% | |
| GAGATAAGCTTCGAAAACAC+AGG | - | chr1_2:22825718-22825737 | None:intergenic | 40.0% | |
| TGCTGAATGTCATCCTCTTT+AGG | + | chr1_2:22825752-22825771 | Msa0062900:intron | 40.0% | |
| ! | ACCCTTTAGAAACATGAGCA+TGG | + | chr1_2:22825795-22825814 | Msa0062900:intron | 40.0% |
| ! | GACCATGCTCATGTTTCTAA+AGG | - | chr1_2:22825800-22825819 | None:intergenic | 40.0% |
| TGTGATTCAAAACACGAGCA+TGG | + | chr1_2:22825983-22826002 | Msa0062900:intron | 40.0% | |
| !! | GTGGATTGGCTATGAAAAGA+TGG | + | chr1_2:22826038-22826057 | Msa0062900:intron | 40.0% |
| TGATGAGCATCAATTACAGC+AGG | - | chr1_2:22826086-22826105 | None:intergenic | 40.0% | |
| TGCTGTAATTGATGCTCATC+AGG | + | chr1_2:22826085-22826104 | Msa0062900:intron | 40.0% | |
| GACTGACAGAGAAGACTATA+GGG | - | chr1_2:22826305-22826324 | None:intergenic | 40.0% | |
| AGACTGACAGAGAAGACTAT+AGG | - | chr1_2:22826306-22826325 | None:intergenic | 40.0% | |
| CGGAAAATGTATACTGGACA+TGG | + | chr1_2:22826539-22826558 | Msa0062900:CDS | 40.0% | |
| TGCTAATGCAGAAGAAGTTC+AGG | + | chr1_2:22826820-22826839 | Msa0062900:intron | 40.0% | |
| GCTAATGCAGAAGAAGTTCA+GGG | + | chr1_2:22826821-22826840 | Msa0062900:intron | 40.0% | |
| ATGGGGTTATGGTTCTTAAG+GGG | + | chr1_2:22826859-22826878 | Msa0062900:intron | 40.0% | |
| TTATTCTTGTCTAGGCCTCA+TGG | + | chr1_2:22826962-22826981 | Msa0062900:intron | 40.0% | |
| GACAGATGATACAAGAGAAC+AGG | - | chr1_2:22827016-22827035 | None:intergenic | 40.0% | |
| !! | ACCGAGGTTTTATGTTGAAC+TGG | + | chr1_2:22827064-22827083 | Msa0062900:intron | 40.0% |
| GCCAGTTCAACATAAAACCT+CGG | - | chr1_2:22827068-22827087 | None:intergenic | 40.0% | |
| TTAGTTAGATGCACTCCCAT+TGG | + | chr1_2:22827196-22827215 | Msa0062900:intron | 40.0% | |
| AAACCACAGGAAATGGTTTG+AGG | - | chr1_2:22827457-22827476 | None:intergenic | 40.0% | |
| !! | GGCACCAAAATGGGTTTTTA+AGG | - | chr1_2:22827556-22827575 | None:intergenic | 40.0% |
| GTTTCTAACTTTCCCTGTCT+TGG | + | chr1_2:22827886-22827905 | Msa0062900:intron | 40.0% | |
| CTTCGTTTGCTTCCTCATTT+CGG | + | chr1_2:22827979-22827998 | Msa0062900:CDS | 40.0% | |
| AAACAGCGTAGATCTCAAGA+AGG | - | chr1_2:22828149-22828168 | None:intergenic | 40.0% | |
| ACAAGAGGGATACATCCAAA+AGG | - | chr1_2:22828802-22828821 | None:intergenic | 40.0% | |
| ATGTTCCATTAGTGTTTGGC+TGG | - | chr1_2:22828843-22828862 | None:intergenic | 40.0% | |
| AGGAGAAGAAGAAGAAGCCA+TGG | - | chr1_2:22822208-22822227 | None:intergenic | 45.0% | |
| TTCTTCTTCTTCTCCTCACG+AGG | + | chr1_2:22822212-22822231 | Msa0062900:CDS | 45.0% | |
| TAGATGGAACAAACCTCGTG+AGG | - | chr1_2:22822228-22822247 | None:intergenic | 45.0% | |
| GATCCTAGGTAAAATCAGGG+AGG | + | chr1_2:22822785-22822804 | Msa0062900:intron | 45.0% | |
| TCCTAGGTAAAATCAGGGAG+GGG | + | chr1_2:22822787-22822806 | Msa0062900:intron | 45.0% | |
| TCTAGATCCTGGTCCTGAAT+CGG | + | chr1_2:22822812-22822831 | Msa0062900:intron | 45.0% | |
| GTGCAGATTGCACAGAACAA+AGG | + | chr1_2:22823098-22823117 | Msa0062900:intron | 45.0% | |
| GTTGAGTAGTGCTACGAATC+TGG | + | chr1_2:22823240-22823259 | Msa0062900:intron | 45.0% | |
| TGGTAAGGCTCCACAGTTTA+TGG | + | chr1_2:22823277-22823296 | Msa0062900:intron | 45.0% | |
| GGTAAGGCTCCACAGTTTAT+GGG | + | chr1_2:22823278-22823297 | Msa0062900:intron | 45.0% | |
| AAAATCGCAATCCTGCTCCT+AGG | - | chr1_2:22823601-22823620 | None:intergenic | 45.0% | |
| ! | GTAAAGGGGACAGGAGATTT+TGG | - | chr1_2:22823800-22823819 | None:intergenic | 45.0% |
| CAGCCATGAAGTAATGACTG+GGG | - | chr1_2:22824375-22824394 | None:intergenic | 45.0% | |
| TTGAATATGGATGCACCGGA+TGG | - | chr1_2:22824547-22824566 | None:intergenic | 45.0% | |
| !! | AAACGCGACCAAAAGTGCTT+CGG | + | chr1_2:22824607-22824626 | Msa0062900:CDS | 45.0% |
| AATATGAGACCTAGTCCCAG+AGG | - | chr1_2:22824771-22824790 | None:intergenic | 45.0% | |
| !! | CAAATTGGGAGTTGATGGAG+TGG | + | chr1_2:22824835-22824854 | Msa0062900:intron | 45.0% |
| GTAGCTTAACCTCACCTAGT+GGG | - | chr1_2:22825270-22825289 | None:intergenic | 45.0% | |
| TGTAGCTTAACCTCACCTAG+TGG | - | chr1_2:22825271-22825290 | None:intergenic | 45.0% | |
| AATACTTCGAGCACCCTCAA+AGG | - | chr1_2:22825494-22825513 | None:intergenic | 45.0% | |
| GAGGCAAACATAGGATTCAC+GGG | - | chr1_2:22825532-22825551 | None:intergenic | 45.0% | |
| AAACAACGAGACTCGTGGTA+CGG | + | chr1_2:22825597-22825616 | Msa0062900:intron | 45.0% | |
| TCTTGCGGCTCATAGAATTG+AGG | + | chr1_2:22825935-22825954 | Msa0062900:intron | 45.0% | |
| CGAGCATGGTCATTACTTTG+TGG | + | chr1_2:22825997-22826016 | Msa0062900:intron | 45.0% | |
| ! | TGATGTGCTCTAGGTGACTT+TGG | - | chr1_2:22826507-22826526 | None:intergenic | 45.0% |
| GAACGACAATGATGTGCTCT+AGG | - | chr1_2:22826516-22826535 | None:intergenic | 45.0% | |
| GCACATCATTGTCGTTCATG+CGG | + | chr1_2:22826519-22826538 | Msa0062900:CDS | 45.0% | |
| ATGGTTCTTAAGGGGCTCAA+AGG | + | chr1_2:22826867-22826886 | Msa0062900:intron | 45.0% | |
| ! | AGATTGTGCTGATAAGGGGA+TGG | + | chr1_2:22827120-22827139 | Msa0062900:intron | 45.0% |
| GAGTGCATCTAACTAAGCAC+TGG | - | chr1_2:22827192-22827211 | None:intergenic | 45.0% | |
| AAGCCTCAAACCATTTCCTG+TGG | + | chr1_2:22827451-22827470 | Msa0062900:intron | 45.0% | |
| ! | ACCATTTCCTGTGGTTTTCC+TGG | + | chr1_2:22827460-22827479 | Msa0062900:intron | 45.0% |
| TCCAGGAAAACCACAGGAAA+TGG | - | chr1_2:22827464-22827483 | None:intergenic | 45.0% | |
| AAAGGTTCCAGGAAAACCAC+AGG | - | chr1_2:22827470-22827489 | None:intergenic | 45.0% | |
| ! | GGTGCCTCAAAATTTTCTCG+CGG | + | chr1_2:22827570-22827589 | Msa0062900:intron | 45.0% |
| ! | TGGACCGCGAGAAAATTTTG+AGG | - | chr1_2:22827577-22827596 | None:intergenic | 45.0% |
| TAAGTCTCCATGCTAGATCC+CGG | - | chr1_2:22828108-22828127 | None:intergenic | 45.0% | |
| !! | ACGCTGTTTCTATCGTCTAG+AGG | + | chr1_2:22828160-22828179 | Msa0062900:intron | 45.0% |
| GCGAGTGTTTCATTGCAGAT+AGG | + | chr1_2:22828208-22828227 | Msa0062900:CDS | 45.0% | |
| GTCAACCAGCCAAACACTAA+TGG | + | chr1_2:22828835-22828854 | Msa0062900:intron | 45.0% | |
| CATGTCCAAACAATGAGGGT+GGG | + | chr1_2:22828952-22828971 | Msa0062900:intron | 45.0% | |
| ATTCTCCCACCCTCATTGTT+TGG | - | chr1_2:22828960-22828979 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTTTGA+GGG | - | chr1_2:22826706-22826725 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+AGG | - | chr1_2:22826707-22826726 | None:intergenic | 5.0% |
| ACGCGTGTGTGTGTTTACCT+GGG | - | chr1_2:22822141-22822160 | None:intergenic | 50.0% | |
| AACGCGTGTGTGTGTTTACC+TGG | - | chr1_2:22822142-22822161 | None:intergenic | 50.0% | |
| ! | ACCCCTCCCTGATTTTACCT+AGG | - | chr1_2:22822791-22822810 | None:intergenic | 50.0% |
| CTAGATCCTGGTCCTGAATC+GGG | + | chr1_2:22822813-22822832 | Msa0062900:intron | 50.0% | |
| TAGATCCTGGTCCTGAATCG+GGG | + | chr1_2:22822814-22822833 | Msa0062900:intron | 50.0% | |
| TGAAGTAATGACTGGGGCTG+AGG | - | chr1_2:22824369-22824388 | None:intergenic | 50.0% | |
| CAGCCCCAGTCATTACTTCA+TGG | + | chr1_2:22824369-22824388 | Msa0062900:intron | 50.0% | |
| CTTCGCGTTATGCTTCCATC+CGG | + | chr1_2:22824529-22824548 | Msa0062900:CDS | 50.0% | |
| !! | AACGCGACCAAAAGTGCTTC+GGG | + | chr1_2:22824608-22824627 | Msa0062900:CDS | 50.0% |
| GTTTGCCCCGTTTCCATTTG+AGG | + | chr1_2:22824794-22824813 | Msa0062900:intron | 50.0% | |
| ! | GTAGAGGTATAGGGGTAGCA+GGG | - | chr1_2:22825395-22825414 | None:intergenic | 50.0% |
| ! | ATTCAGCAGCACTGGAGCTA+TGG | - | chr1_2:22825740-22825759 | None:intergenic | 50.0% |
| AGGATGACATTCAGCAGCAC+TGG | - | chr1_2:22825748-22825767 | None:intergenic | 50.0% | |
| GGGTTGCAGAACACCTAAAG+AGG | - | chr1_2:22825768-22825787 | None:intergenic | 50.0% | |
| ! | TTTTTGCAGTTGGAGGGGTG+TGG | + | chr1_2:22826271-22826290 | Msa0062900:intron | 50.0% |
| !! | TTTTGCAGTTGGAGGGGTGT+GGG | + | chr1_2:22826272-22826291 | Msa0062900:intron | 50.0% |
| CAGCACACCTAAATGCTGCA+AGG | - | chr1_2:22826395-22826414 | None:intergenic | 50.0% | |
| CTTGCAGCATTTAGGTGTGC+TGG | + | chr1_2:22826393-22826412 | Msa0062900:intron | 50.0% | |
| ATTATGGGGAAGCTACCCCA+CGG | + | chr1_2:22826431-22826450 | Msa0062900:CDS | 50.0% | |
| GATAAGGGGATGGAGATACC+TGG | + | chr1_2:22827130-22827149 | Msa0062900:intron | 50.0% | |
| TTAGATGCACTCCCATTGGC+AGG | + | chr1_2:22827200-22827219 | Msa0062900:intron | 50.0% | |
| TAGATGCACTCCCATTGGCA+GGG | + | chr1_2:22827201-22827220 | Msa0062900:intron | 50.0% | |
| TTGGCAGATTGGCAACTGTG+TGG | + | chr1_2:22827937-22827956 | Msa0062900:intron | 50.0% | |
| TGGCAGATTGGCAACTGTGT+GGG | + | chr1_2:22827938-22827957 | Msa0062900:intron | 50.0% | |
| CCACCATTGTCATACTCCCT+CGG | + | chr1_2:22828061-22828080 | Msa0062900:CDS | 50.0% | |
| ATACTCCCTCGGACGCTTAA+AGG | + | chr1_2:22828072-22828091 | Msa0062900:CDS | 50.0% | |
| TACTCCCTCGGACGCTTAAA+GGG | + | chr1_2:22828073-22828092 | Msa0062900:CDS | 50.0% | |
| CATACCCTTTAAGCGTCCGA+GGG | - | chr1_2:22828080-22828099 | None:intergenic | 50.0% | |
| TCATACCCTTTAAGCGTCCG+AGG | - | chr1_2:22828081-22828100 | None:intergenic | 50.0% | |
| ! | GGACGCTTAAAGGGTATGAC+TGG | + | chr1_2:22828082-22828101 | Msa0062900:CDS | 50.0% |
| ! | GCTTAAAGGGTATGACTGGC+CGG | + | chr1_2:22828086-22828105 | Msa0062900:CDS | 50.0% |
| ! | CTTAAAGGGTATGACTGGCC+GGG | + | chr1_2:22828087-22828106 | Msa0062900:CDS | 50.0% |
| CAGTGGAATGAGCATACCTG+AGG | - | chr1_2:22828522-22828541 | None:intergenic | 50.0% | |
| CAGGTATGCTCATTCCACTG+TGG | + | chr1_2:22828522-22828541 | Msa0062900:intron | 50.0% | |
| GCATGTCCAAACAATGAGGG+TGG | + | chr1_2:22828951-22828970 | Msa0062900:intron | 50.0% | |
| GTCAGACTCGACGAGATCCT+AGG | + | chr1_2:22822771-22822790 | Msa0062900:intron | 55.0% | |
| AGATCCTGGTCCTGAATCGG+GGG | + | chr1_2:22822815-22822834 | Msa0062900:intron | 55.0% | |
| TGAATCGGGGGACTGTTGCA+CGG | + | chr1_2:22822827-22822846 | Msa0062900:intron | 55.0% | |
| TCTGTTCTGGCGGCTGCATT+GGG | - | chr1_2:22823027-22823046 | None:intergenic | 55.0% | |
| TTCTGTTCTGGCGGCTGCAT+TGG | - | chr1_2:22823028-22823047 | None:intergenic | 55.0% | |
| ACCGCACACGACACTAACAC+CGG | - | chr1_2:22823986-22824005 | None:intergenic | 55.0% | |
| !! | CTCTCCACCCGAAGCACTTT+TGG | - | chr1_2:22824618-22824637 | None:intergenic | 55.0% |
| ! | GGTAGAGGTATAGGGGTAGC+AGG | - | chr1_2:22825396-22825415 | None:intergenic | 55.0% |
| AGGGGATGGAGATACCTGGA+AGG | + | chr1_2:22827134-22827153 | Msa0062900:intron | 55.0% | |
| TTCACCAGAGCCCTGCCAAT+GGG | - | chr1_2:22827214-22827233 | None:intergenic | 55.0% | |
| ATTCACCAGAGCCCTGCCAA+TGG | - | chr1_2:22827215-22827234 | None:intergenic | 55.0% | |
| TGCTCAGCACTGCCGAAATG+AGG | - | chr1_2:22827994-22828013 | None:intergenic | 55.0% | |
| ! | CCGAGGGAGTATGACAATGG+TGG | - | chr1_2:22828064-22828083 | None:intergenic | 55.0% |
| ! | CGTCCGAGGGAGTATGACAA+TGG | - | chr1_2:22828067-22828086 | None:intergenic | 55.0% |
| AGGGAGGGGTCTCTAGATCC+TGG | + | chr1_2:22822801-22822820 | Msa0062900:intron | 60.0% | |
| GTGCAACAGTCCCCCGATTC+AGG | - | chr1_2:22822828-22822847 | None:intergenic | 60.0% | |
| CTGTTCTGGCGGCTGCATTG+GGG | - | chr1_2:22823026-22823045 | None:intergenic | 60.0% | |
| ! | GCCGGTGTTAGTGTCGTGTG+CGG | + | chr1_2:22823982-22824001 | Msa0062900:intron | 60.0% |
| GAGACAACCTGCTGGGGTTG+TGG | + | chr1_2:22824505-22824524 | Msa0062900:CDS | 60.0% | |
| !! | GCGACCAAAAGTGCTTCGGG+TGG | + | chr1_2:22824611-22824630 | Msa0062900:CDS | 60.0% |
| AGGTCACCTTGCCCTACCGT+GGG | - | chr1_2:22826450-22826469 | None:intergenic | 60.0% | |
| ! | TGACTGGCCGGGATCTAGCA+TGG | + | chr1_2:22828098-22828117 | Msa0062900:CDS | 60.0% |
| CAGTCCCCCGATTCAGGACC+AGG | - | chr1_2:22822822-22822841 | None:intergenic | 65.0% | |
| CGGGGGACTGTTGCACGGAT+TGG | + | chr1_2:22822832-22822851 | Msa0062900:intron | 65.0% | |
| GCGAAGTCCACAACCCCAGC+AGG | - | chr1_2:22824515-22824534 | None:intergenic | 65.0% | |
| TGGGGAAGCTACCCCACGGT+AGG | + | chr1_2:22826435-22826454 | Msa0062900:CDS | 65.0% | |
| GGGGAAGCTACCCCACGGTA+GGG | + | chr1_2:22826436-22826455 | Msa0062900:CDS | 65.0% | |
| AGCTACCCCACGGTAGGGCA+AGG | + | chr1_2:22826441-22826460 | Msa0062900:CDS | 65.0% | |
| GGTCACCTTGCCCTACCGTG+GGG | - | chr1_2:22826449-22826468 | None:intergenic | 65.0% | |
| GAGGTCACCTTGCCCTACCG+TGG | - | chr1_2:22826451-22826470 | None:intergenic | 65.0% | |
| CACTCCCATTGGCAGGGCTC+TGG | + | chr1_2:22827207-22827226 | Msa0062900:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 22822138 | 22829078 | 22822138 | ID=Msa0062900;Name=Msa0062900 |
| chr1_2 | mRNA | 22822138 | 22829078 | 22822138 | ID=Msa0062900-mRNA-1;Parent=Msa0062900;Name=Msa0062900-mRNA-1;_AED=0.10;_eAED=0.10;_QI=69|0.33|0.14|0.85|0.33|0.14|7|0|293 |
| chr1_2 | exon | 22822138 | 22822233 | 22822138 | ID=Msa0062900-mRNA-1:exon:8386;Parent=Msa0062900-mRNA-1 |
| chr1_2 | exon | 22824472 | 22824687 | 22824472 | ID=Msa0062900-mRNA-1:exon:8387;Parent=Msa0062900-mRNA-1 |
| chr1_2 | exon | 22826280 | 22826287 | 22826280 | ID=Msa0062900-mRNA-1:exon:8388;Parent=Msa0062900-mRNA-1 |
| chr1_2 | exon | 22826407 | 22826578 | 22826407 | ID=Msa0062900-mRNA-1:exon:8389;Parent=Msa0062900-mRNA-1 |
| chr1_2 | exon | 22827944 | 22828164 | 22827944 | ID=Msa0062900-mRNA-1:exon:8390;Parent=Msa0062900-mRNA-1 |
| chr1_2 | exon | 22828180 | 22828399 | 22828180 | ID=Msa0062900-mRNA-1:exon:8391;Parent=Msa0062900-mRNA-1 |
| chr1_2 | exon | 22829061 | 22829078 | 22829061 | ID=Msa0062900-mRNA-1:exon:8392;Parent=Msa0062900-mRNA-1 |
| chr1_2 | five_prime_UTR | 22822138 | 22822206 | 22822138 | ID=Msa0062900-mRNA-1:five_prime_utr;Parent=Msa0062900-mRNA-1 |
| chr1_2 | CDS | 22822207 | 22822233 | 22822207 | ID=Msa0062900-mRNA-1:cds;Parent=Msa0062900-mRNA-1 |
| chr1_2 | CDS | 22824472 | 22824687 | 22824472 | ID=Msa0062900-mRNA-1:cds;Parent=Msa0062900-mRNA-1 |
| chr1_2 | CDS | 22826280 | 22826287 | 22826280 | ID=Msa0062900-mRNA-1:cds;Parent=Msa0062900-mRNA-1 |
| chr1_2 | CDS | 22826407 | 22826578 | 22826407 | ID=Msa0062900-mRNA-1:cds;Parent=Msa0062900-mRNA-1 |
| chr1_2 | CDS | 22827944 | 22828164 | 22827944 | ID=Msa0062900-mRNA-1:cds;Parent=Msa0062900-mRNA-1 |
| chr1_2 | CDS | 22828180 | 22828399 | 22828180 | ID=Msa0062900-mRNA-1:cds;Parent=Msa0062900-mRNA-1 |
| chr1_2 | CDS | 22829061 | 22829078 | 22829061 | ID=Msa0062900-mRNA-1:cds;Parent=Msa0062900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
