Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0153770 | XP_013466810.2 | 97.668 | 343 | 8 | 0 | 1 | 343 | 1 | 343 | 0.0 | 694 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0153770 | sp|Q9LIH7|ZDHC7_ARATH | 56.325 | 332 | 140 | 2 | 17 | 343 | 14 | 345 | 1.46e-139 | 402 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0153770 | A0A396JNJ9 | 97.668 | 343 | 8 | 0 | 1 | 343 | 1 | 343 | 0.0 | 694 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013860 | Msa0153770 | 0.906316 | 1.690061e-80 | -8.615850e-47 |
| Msa0062900 | Msa0153770 | 0.808835 | 2.547237e-50 | -8.615850e-47 |
| Msa0153770 | Msa0703810 | 0.801494 | 8.767249e-49 | -8.615850e-47 |
| Msa0153770 | Msa1307160 | 0.802810 | 4.700707e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0153770 | MtrunA17_Chr1g0163561 | 97.668 | 343 | 8 | 0 | 1 | 343 | 1 | 343 | 0.0 | 694 |
| Msa0153770 | MtrunA17_Chr4g0037991 | 65.868 | 334 | 113 | 1 | 10 | 343 | 29 | 361 | 8.20e-173 | 484 |
| Msa0153770 | MtrunA17_Chr4g0009911 | 35.938 | 128 | 60 | 3 | 102 | 215 | 51 | 170 | 1.25e-16 | 79.3 |
| Msa0153770 | MtrunA17_Chr1g0199411 | 34.694 | 147 | 86 | 4 | 75 | 215 | 17 | 159 | 1.09e-15 | 76.3 |
| Msa0153770 | MtrunA17_Chr4g0011001 | 32.121 | 165 | 85 | 5 | 56 | 193 | 3 | 167 | 3.59e-13 | 69.3 |
| Msa0153770 | MtrunA17_Chr5g0406311 | 41.270 | 63 | 37 | 0 | 153 | 215 | 170 | 232 | 3.52e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0153770 | AT3G18620.1 | 56.325 | 332 | 140 | 2 | 17 | 343 | 14 | 345 | 1.49e-140 | 402 |
| Msa0153770 | AT3G09320.1 | 29.583 | 240 | 122 | 7 | 72 | 299 | 12 | 216 | 3.28e-15 | 75.5 |
| Msa0153770 | AT4G22750.1 | 36.207 | 116 | 71 | 1 | 97 | 212 | 65 | 177 | 3.04e-13 | 69.7 |
| Msa0153770 | AT5G05070.1 | 28.931 | 159 | 82 | 5 | 152 | 310 | 172 | 299 | 1.99e-12 | 68.2 |
| Msa0153770 | AT5G04270.1 | 44.444 | 63 | 35 | 0 | 153 | 215 | 94 | 156 | 7.69e-12 | 65.5 |
| Msa0153770 | AT3G56920.1 | 44.444 | 63 | 35 | 0 | 152 | 214 | 143 | 205 | 9.81e-12 | 65.9 |
| Msa0153770 | AT4G00840.2 | 47.170 | 53 | 28 | 0 | 141 | 193 | 101 | 153 | 3.42e-11 | 62.8 |
| Msa0153770 | AT2G40990.1 | 39.683 | 63 | 38 | 0 | 152 | 214 | 161 | 223 | 6.27e-11 | 63.5 |
| Msa0153770 | AT4G00840.1 | 47.170 | 53 | 28 | 0 | 141 | 193 | 101 | 153 | 8.87e-11 | 62.4 |
Find 70 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACTCCCTCGGACGCTTAA+AGG | 0.183327 | 1_4:-17642883 | Msa0153770:CDS |
| TAGCTTCCCCATAATATATT+TGG | 0.224116 | 1_4:+17644532 | None:intergenic |
| GAACACCACCAAATATATTA+TGG | 0.225012 | 1_4:-17644540 | Msa0153770:CDS |
| TATATGCTAGCATGCATATT+TGG | 0.260054 | 1_4:-17642917 | Msa0153770:CDS |
| CTCTCCACCCGAAGCACTTT+TGG | 0.269374 | 1_4:+17646340 | None:intergenic |
| CTTCGTTTGCTTCCTCATTT+CGG | 0.338629 | 1_4:-17642976 | Msa0153770:CDS |
| ACACCAACCACATTTGAATA+TGG | 0.339245 | 1_4:+17646398 | None:intergenic |
| AACGCGTGTGTGTGTTTACC+TGG | 0.394037 | 1_4:+17648746 | None:intergenic |
| AACACCACCAAATATATTAT+GGG | 0.394441 | 1_4:-17644539 | Msa0153770:CDS |
| GAAATTGAGAGTGTCGATTT+CGG | 0.409805 | 1_4:+17648702 | None:intergenic |
| AACGCGGCCAAAAGTGCTTC+GGG | 0.421765 | 1_4:-17646347 | Msa0153770:CDS |
| AGACTGACAGAGAAGACTAT+AGG | 0.425751 | 1_4:+17644652 | None:intergenic |
| GACTGACAGAGAAGACTATA+GGG | 0.431769 | 1_4:+17644653 | None:intergenic |
| AATCACATATAGGAGCAATA+TGG | 0.432779 | 1_4:-17646495 | Msa0153770:intron |
| GCGAGTGTTTCATTGCAGAT+AGG | 0.447344 | 1_4:-17642747 | Msa0153770:CDS |
| AAACGCGGCCAAAAGTGCTT+CGG | 0.452212 | 1_4:-17646348 | Msa0153770:CDS |
| GAGACAACCTGCTGGGGTTG+TGG | 0.454554 | 1_4:-17646450 | Msa0153770:CDS |
| TACTCCCTCGGACGCTTAAA+GGG | 0.462436 | 1_4:-17642882 | Msa0153770:CDS |
| CGGAAAATGTATACTGGACA+TGG | 0.471242 | 1_4:-17644416 | Msa0153770:CDS |
| CTTGCAGCATTTAGGTGTGC+TGG | 0.481835 | 1_4:-17644562 | Msa0153770:CDS |
| TTCATGCGGAAAATGTATAC+TGG | 0.483089 | 1_4:-17644422 | Msa0153770:CDS |
| TGATGTGCTCTAGGTGACTT+TGG | 0.487243 | 1_4:+17644451 | None:intergenic |
| GCTTAAAGGGTATGACTGGC+CGG | 0.495021 | 1_4:-17642869 | Msa0153770:CDS |
| CTTCCCCATAATATATTTGG+TGG | 0.506867 | 1_4:+17644535 | None:intergenic |
| GAGGTCACCTTGCCCTACCG+TGG | 0.513800 | 1_4:+17644507 | None:intergenic |
| AGGAGAAGAAGAAGAAGCCA+TGG | 0.531669 | 1_4:+17648680 | None:intergenic |
| GGACGCTTAAAGGGTATGAC+TGG | 0.532460 | 1_4:-17642873 | Msa0153770:CDS |
| AGCTACCCCACGGTAGGGCA+AGG | 0.533042 | 1_4:-17644514 | Msa0153770:CDS |
| ATACATAAGATGAATCTGTC+AGG | 0.534757 | 1_4:-17642536 | Msa0153770:exon |
| AGGTCACCTTGCCCTACCGT+GGG | 0.535258 | 1_4:+17644508 | None:intergenic |
| ATCGACACTCTCAATTTCCA+TGG | 0.535306 | 1_4:-17648697 | Msa0153770:exon |
| TGCTCAGCACTGCCGAAATG+AGG | 0.539557 | 1_4:+17642964 | None:intergenic |
| TGGCAGATTGGCAACTGTGT+GGG | 0.550063 | 1_4:-17643017 | Msa0153770:intron |
| TAATTATGAGACAACCTGCT+GGG | 0.551035 | 1_4:-17646457 | Msa0153770:CDS |
| TTCTTCTTCTTCTCCTCACG+AGG | 0.553010 | 1_4:-17648673 | Msa0153770:intron |
| ACATTTGAATATGGATGCAC+CGG | 0.555614 | 1_4:+17646407 | None:intergenic |
| GCGAAGTCCACAACCCCAGC+AGG | 0.560586 | 1_4:+17646443 | None:intergenic |
| CTTAAAGGGTATGACTGGCC+GGG | 0.561212 | 1_4:-17642868 | Msa0153770:CDS |
| ATAATTATGAGACAACCTGC+TGG | 0.564546 | 1_4:-17646458 | Msa0153770:CDS |
| CTTCGCGTTATGCTTCCATC+CGG | 0.565639 | 1_4:-17646426 | Msa0153770:CDS |
| TTGAATATGGATGCACCGGA+TGG | 0.567232 | 1_4:+17646411 | None:intergenic |
| CCACCATTGTCATACTCCCT+CGG | 0.568831 | 1_4:-17642894 | Msa0153770:CDS |
| TAAGTCTCCATGCTAGATCC+CGG | 0.577695 | 1_4:+17642850 | None:intergenic |
| GAACGACAATGATGTGCTCT+AGG | 0.583530 | 1_4:+17644442 | None:intergenic |
| TGACTGGCCGGGATCTAGCA+TGG | 0.593847 | 1_4:-17642857 | Msa0153770:CDS |
| TCATACCCTTTAAGCGTCCG+AGG | 0.598416 | 1_4:+17642877 | None:intergenic |
| TGGGGAAGCTACCCCACGGT+AGG | 0.603154 | 1_4:-17644520 | Msa0153770:CDS |
| TTGGCAGATTGGCAACTGTG+TGG | 0.604212 | 1_4:-17643018 | Msa0153770:intron |
| TAGGAGCAATATGGAACTGA+GGG | 0.616913 | 1_4:-17646486 | Msa0153770:CDS |
| CATCCATATTCAAATGTGGT+TGG | 0.621569 | 1_4:-17646401 | Msa0153770:CDS |
| ACGCTGTTTCTATCGTCTAG+AGG | 0.621959 | 1_4:-17642795 | Msa0153770:CDS |
| GGGGAAGCTACCCCACGGTA+GGG | 0.622081 | 1_4:-17644519 | Msa0153770:CDS |
| GCACATCATTGTCGTTCATG+CGG | 0.626648 | 1_4:-17644436 | Msa0153770:CDS |
| ACACCACCAAATATATTATG+GGG | 0.627205 | 1_4:-17644538 | Msa0153770:CDS |
| ACGCGTGTGTGTGTTTACCT+GGG | 0.632697 | 1_4:+17648747 | None:intergenic |
| AAACAGCGTAGATCTCAAGA+AGG | 0.634753 | 1_4:+17642809 | None:intergenic |
| ATATTCAAATGTGGTTGGTG+TGG | 0.638886 | 1_4:-17646396 | Msa0153770:CDS |
| CGTGCCTCTTCTGAGTAACA+CGG | 0.643444 | 1_4:+17642559 | None:intergenic |
| CAGCACACCTAAATGCTGCA+AGG | 0.644057 | 1_4:+17644563 | None:intergenic |
| ATAGGAGCAATATGGAACTG+AGG | 0.650745 | 1_4:-17646487 | Msa0153770:intron |
| ACTTCCGTGTTACTCAGAAG+AGG | 0.655103 | 1_4:-17642563 | Msa0153770:CDS |
| CCGAGGGAGTATGACAATGG+TGG | 0.659728 | 1_4:+17642894 | None:intergenic |
| CATACCCTTTAAGCGTCCGA+GGG | 0.660431 | 1_4:+17642878 | None:intergenic |
| CGTCCGAGGGAGTATGACAA+TGG | 0.661120 | 1_4:+17642891 | None:intergenic |
| GGTGCATCCATATTCAAATG+TGG | 0.668516 | 1_4:-17646405 | Msa0153770:CDS |
| GCGGCCAAAAGTGCTTCGGG+TGG | 0.668820 | 1_4:-17646344 | Msa0153770:CDS |
| AATTATGAGACAACCTGCTG+GGG | 0.682923 | 1_4:-17646456 | Msa0153770:CDS |
| TAGATGGAACAAACCTCGTG+AGG | 0.699163 | 1_4:+17648660 | None:intergenic |
| GGTCACCTTGCCCTACCGTG+GGG | 0.699639 | 1_4:+17644509 | None:intergenic |
| ATTATGGGGAAGCTACCCCA+CGG | 0.740734 | 1_4:-17644524 | Msa0153770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAATTTTCGTTTTTTTTT+TGG | - | chr1_4:17642564-17642583 | Msa0153770:CDS | 10.0% |
| !!! | ATATTTTTTTATTGTGATTA+AGG | - | chr1_4:17642750-17642769 | Msa0153770:CDS | 10.0% |
| !!! | TACATAATATTTTAAATCAA+AGG | + | chr1_4:17644353-17644372 | None:intergenic | 10.0% |
| !! | AATTTATACAAAATTCAAAT+TGG | - | chr1_4:17645011-17645030 | Msa0153770:intron | 10.0% |
| !! | ATTTATACAAAATTCAAATT+GGG | - | chr1_4:17645012-17645031 | Msa0153770:intron | 10.0% |
| !!! | ATTTTTATTTTTTTTTCAGT+TGG | - | chr1_4:17646452-17646471 | Msa0153770:CDS | 10.0% |
| !!! | AGTTTTATTATTGAAAAATA+AGG | + | chr1_4:17646862-17646881 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTTTGAG+GGG | + | chr1_4:17646896-17646915 | None:intergenic | 10.0% |
| !!! | TTATCTATTCCTTTAATTTT+GGG | - | chr1_4:17642618-17642637 | Msa0153770:CDS | 15.0% |
| !! | TACATATGAATTTATCAATT+TGG | + | chr1_4:17643080-17643099 | None:intergenic | 15.0% |
| !! | TTTATAAAATAAGTCTAAAG+CGG | - | chr1_4:17643140-17643159 | Msa0153770:intron | 15.0% |
| !!! | GGGTTTTTTTAAATATTTTT+CGG | + | chr1_4:17643177-17643196 | None:intergenic | 15.0% |
| !!! | TGCTATATTTGTTATATTAT+CGG | + | chr1_4:17643869-17643888 | None:intergenic | 15.0% |
| !! | AATCTATAACAATATGTAAA+GGG | + | chr1_4:17643998-17644017 | None:intergenic | 15.0% |
| !! | TAATCTATAACAATATGTAA+AGG | + | chr1_4:17643999-17644018 | None:intergenic | 15.0% |
| !! | ATTAAATGAAATGATTGTTA+AGG | - | chr1_4:17644057-17644076 | Msa0153770:intron | 15.0% |
| !! | TTAAATGAAATGATTGTTAA+GGG | - | chr1_4:17644058-17644077 | Msa0153770:intron | 15.0% |
| !! | TTCACATTTATATCTAAATA+CGG | + | chr1_4:17644410-17644429 | None:intergenic | 15.0% |
| !! | AAATCCCTTAAAATAAAAAT+TGG | - | chr1_4:17645239-17645258 | Msa0153770:intron | 15.0% |
| !!! | ATAGAAAGTATAATGTTATA+AGG | + | chr1_4:17646032-17646051 | None:intergenic | 15.0% |
| !!! | AAACAAGTATATATATTTTG+TGG | + | chr1_4:17648726-17648745 | None:intergenic | 15.0% |
| !! | AAAATGATGAGAAAAGAAAA+AGG | + | chr1_4:17642517-17642536 | None:intergenic | 20.0% |
| !!! | CTTATCTATTCCTTTAATTT+TGG | - | chr1_4:17642617-17642636 | Msa0153770:CDS | 20.0% |
| !! | TGTCATTCAATAACAATTAT+TGG | - | chr1_4:17642861-17642880 | Msa0153770:CDS | 20.0% |
| !! | GTCATTCAATAACAATTATT+GGG | - | chr1_4:17642862-17642881 | Msa0153770:CDS | 20.0% |
| !! | TATGAATTTATCAATTTGGT+AGG | + | chr1_4:17643076-17643095 | None:intergenic | 20.0% |
| !! | CACTTAAAAAAACATCAAAA+TGG | - | chr1_4:17643227-17643246 | Msa0153770:intron | 20.0% |
| !! | AACAAACTAAGCAAAAATTT+GGG | + | chr1_4:17643500-17643519 | None:intergenic | 20.0% |
| !! | TAACAAACTAAGCAAAAATT+TGG | + | chr1_4:17643501-17643520 | None:intergenic | 20.0% |
| !!! | GCACAATATATCATTTTTAT+AGG | - | chr1_4:17643914-17643933 | Msa0153770:intron | 20.0% |
| !!! | TTTATAGGCAAATTTGTTTA+AGG | - | chr1_4:17643929-17643948 | Msa0153770:intron | 20.0% |
| !!! | TTATAGGCAAATTTGTTTAA+GGG | - | chr1_4:17643930-17643949 | Msa0153770:intron | 20.0% |
| !! | ATCTATAACAATATGTAAAG+GGG | + | chr1_4:17643997-17644016 | None:intergenic | 20.0% |
| !! | TAAATGAAATGATTGTTAAG+GGG | - | chr1_4:17644059-17644078 | Msa0153770:intron | 20.0% |
| !!! | AAGTAAATATCTGAAACTAT+AGG | - | chr1_4:17644428-17644447 | Msa0153770:CDS | 20.0% |
| !! | CTATAGTTGTTTATTAAACT+CGG | - | chr1_4:17644467-17644486 | Msa0153770:CDS | 20.0% |
| !! | TATAGTTGTTTATTAAACTC+GGG | - | chr1_4:17644468-17644487 | Msa0153770:CDS | 20.0% |
| !!! | CTTTTTGTTTTGATTTGTAA+TGG | + | chr1_4:17644778-17644797 | None:intergenic | 20.0% |
| !! | ATCCTAACATATATTTGTAA+GGG | + | chr1_4:17645105-17645124 | None:intergenic | 20.0% |
| !!! | ATTTTAAGGGATTTATTTAG+TGG | + | chr1_4:17645233-17645252 | None:intergenic | 20.0% |
| !!! | TGGTCCAATTTTTATTTTAA+GGG | + | chr1_4:17645246-17645265 | None:intergenic | 20.0% |
| !!! | TTGGTCCAATTTTTATTTTA+AGG | + | chr1_4:17645247-17645266 | None:intergenic | 20.0% |
| !! | TATGATAATTATCACAACAA+TGG | + | chr1_4:17645397-17645416 | None:intergenic | 20.0% |
| !! | GAATTTATCATATGACATTA+TGG | + | chr1_4:17645499-17645518 | None:intergenic | 20.0% |
| !! | TATAAGTCAAAGCAATTAAA+GGG | + | chr1_4:17645559-17645578 | None:intergenic | 20.0% |
| !! | ATATAAGTCAAAGCAATTAA+AGG | + | chr1_4:17645560-17645579 | None:intergenic | 20.0% |
| !! | TAAAATTATGGGGAAATATA+GGG | + | chr1_4:17645747-17645766 | None:intergenic | 20.0% |
| !! | ATAAAATTATGGGGAAATAT+AGG | + | chr1_4:17645748-17645767 | None:intergenic | 20.0% |
| !! | ACTCCATCATATAAAATTAT+GGG | + | chr1_4:17645758-17645777 | None:intergenic | 20.0% |
| !! | TACTTTCTATCAGTTAAATT+TGG | - | chr1_4:17646042-17646061 | Msa0153770:intron | 20.0% |
| !!! | TTTATTTTTTTTTCAGTTGG+AGG | - | chr1_4:17646455-17646474 | Msa0153770:CDS | 20.0% |
| !!! | TTATTTTTTTTTCAGTTGGA+GGG | - | chr1_4:17646456-17646475 | Msa0153770:CDS | 20.0% |
| !! | AGATTAATATTATCGTAGTA+AGG | + | chr1_4:17646787-17646806 | None:intergenic | 20.0% |
| !! | ATGATATTACAAAGAAACAA+CGG | + | chr1_4:17646817-17646836 | None:intergenic | 20.0% |
| !! | AAAAAAAAACTCTACCTTAA+AGG | - | chr1_4:17646916-17646935 | Msa0153770:intron | 20.0% |
| !! | AGCTATAACAAGTAATATAT+GGG | + | chr1_4:17647183-17647202 | None:intergenic | 20.0% |
| !! | AAGCTATAACAAGTAATATA+TGG | + | chr1_4:17647184-17647203 | None:intergenic | 20.0% |
| !!! | TAGAAAATCATGTCTTTTTT+AGG | + | chr1_4:17647234-17647253 | None:intergenic | 20.0% |
| !! | TACAAAACAGTTTCTATAAT+GGG | + | chr1_4:17647474-17647493 | None:intergenic | 20.0% |
| !! | CATTTACTGTTTGAATAAAA+TGG | - | chr1_4:17647570-17647589 | Msa0153770:intron | 20.0% |
| !!! | TTTTTGTCAAGAACTAAATT+GGG | + | chr1_4:17647787-17647806 | None:intergenic | 20.0% |
| !!! | TTTTTTGTCAAGAACTAAAT+TGG | + | chr1_4:17647788-17647807 | None:intergenic | 20.0% |
| !! | ACATCTATATAAAAATGTCA+AGG | + | chr1_4:17647826-17647845 | None:intergenic | 20.0% |
| !! | ACTAATGTAAAAGTTAACAT+TGG | - | chr1_4:17647878-17647897 | Msa0153770:intron | 20.0% |
| !!! | CAAAAAATCTAACAAGATTT+TGG | + | chr1_4:17648530-17648549 | None:intergenic | 20.0% |
| !!! | CAAAATCTTGTTAGATTTTT+TGG | - | chr1_4:17648528-17648547 | Msa0153770:intron | 20.0% |
| ! | AAAGAAAAAGGATTGATAGA+TGG | + | chr1_4:17642505-17642524 | None:intergenic | 25.0% |
| !! | TTAGGTTTTCCCAAAATTAA+AGG | + | chr1_4:17642630-17642649 | None:intergenic | 25.0% |
| !!! | GTAGAGAATTTTTTGAGTAA+TGG | - | chr1_4:17642661-17642680 | Msa0153770:CDS | 25.0% |
| ! | CATCATGTTAATTCAATAGT+TGG | - | chr1_4:17642723-17642742 | Msa0153770:CDS | 25.0% |
| !! | ATTGTGATTAAGGAGATTTT+AGG | - | chr1_4:17642760-17642779 | Msa0153770:CDS | 25.0% |
| !!! | ATTAAGGAGATTTTAGGTTA+GGG | - | chr1_4:17642766-17642785 | Msa0153770:CDS | 25.0% |
| ! | ATTTATAACCACTGTTCTAT+TGG | + | chr1_4:17643387-17643406 | None:intergenic | 25.0% |
| ! | TTATAAATTAACGTGAGAGA+GGG | - | chr1_4:17643399-17643418 | Msa0153770:intron | 25.0% |
| !! | AAGGGTTTTCAATAAATCAT+TGG | - | chr1_4:17643526-17643545 | Msa0153770:intron | 25.0% |
| !!! | ATTTTTAGGATTGCAATTTC+TGG | - | chr1_4:17643629-17643648 | Msa0153770:intron | 25.0% |
| !!! | TATTTGTTATATTATCGGTG+TGG | + | chr1_4:17643864-17643883 | None:intergenic | 25.0% |
| !! | AATTTGTTTAAGGGCATAAT+CGG | - | chr1_4:17643939-17643958 | Msa0153770:intron | 25.0% |
| ! | AGAAGTTTCCTAAAACTATA+TGG | - | chr1_4:17644298-17644317 | Msa0153770:intron | 25.0% |
| ! | ATAGTTGTTTATTAAACTCG+GGG | - | chr1_4:17644469-17644488 | Msa0153770:CDS | 25.0% |
| ! | AACTGTGGAAAGAAAAAAAA+GGG | + | chr1_4:17644598-17644617 | None:intergenic | 25.0% |
| ! | AAACTGTGGAAAGAAAAAAA+AGG | + | chr1_4:17644599-17644618 | None:intergenic | 25.0% |
| ! | AATCAAAACAAAAAGAAACG+CGG | - | chr1_4:17644783-17644802 | Msa0153770:intron | 25.0% |
| ! | AGGAAAATCAAATCAAATTC+TGG | + | chr1_4:17644942-17644961 | None:intergenic | 25.0% |
| !!! | AATTTGATTTGATTTTCCTC+TGG | - | chr1_4:17644943-17644962 | Msa0153770:intron | 25.0% |
| !!! | ATTTGATTTGATTTTCCTCT+GGG | - | chr1_4:17644944-17644963 | Msa0153770:intron | 25.0% |
| ! | TGTATAAATTCAACCTCAAA+TGG | + | chr1_4:17645001-17645020 | None:intergenic | 25.0% |
| ! | GTTGTTAATATGTAATGCTT+TGG | - | chr1_4:17645058-17645077 | Msa0153770:intron | 25.0% |
| ! | TTCCCTTACAAATATATGTT+AGG | - | chr1_4:17645100-17645119 | Msa0153770:intron | 25.0% |
| ! | GATCCTAACATATATTTGTA+AGG | + | chr1_4:17645106-17645125 | None:intergenic | 25.0% |
| ! | AAATATATGTTAGGATCAGA+AGG | - | chr1_4:17645109-17645128 | Msa0153770:intron | 25.0% |
| ! | TATGCTATTGCATTGTATAT+GGG | + | chr1_4:17645300-17645319 | None:intergenic | 25.0% |
| ! | TTATGCTATTGCATTGTATA+TGG | + | chr1_4:17645301-17645320 | None:intergenic | 25.0% |
| !! | TTCCCCATAATTTTATATGA+TGG | - | chr1_4:17645752-17645771 | Msa0153770:intron | 25.0% |
| ! | CTCCATCATATAAAATTATG+GGG | + | chr1_4:17645757-17645776 | None:intergenic | 25.0% |
| ! | CACTCCATCATATAAAATTA+TGG | + | chr1_4:17645759-17645778 | None:intergenic | 25.0% |
| ! | TTGTCTAAGTAAAAGTAAGA+CGG | + | chr1_4:17645883-17645902 | None:intergenic | 25.0% |
| !! | GATTTTACACAAATAAAGTG+TGG | - | chr1_4:17646210-17646229 | Msa0153770:intron | 25.0% |
| !! | ATGATGCAGTTTTTCATTTT+TGG | + | chr1_4:17646402-17646421 | None:intergenic | 25.0% |
| !!! | TATTTTTTTTTCAGTTGGAG+GGG | - | chr1_4:17646457-17646476 | Msa0153770:CDS | 25.0% |
| ! | AACACCACCAAATATATTAT+GGG | - | chr1_4:17646607-17646626 | Msa0153770:intron | 25.0% |
| ! | ATATTATCGTAGTAAGGTAA+TGG | + | chr1_4:17646781-17646800 | None:intergenic | 25.0% |
| ! | GAACTTTGAATGTAATGATT+GGG | - | chr1_4:17647100-17647119 | Msa0153770:intron | 25.0% |
| !!! | AATCATGTCTTTTTTAGGAA+GGG | + | chr1_4:17647229-17647248 | None:intergenic | 25.0% |
| !!! | AAATCATGTCTTTTTTAGGA+AGG | + | chr1_4:17647230-17647249 | None:intergenic | 25.0% |
| !! | ATTAAAGATTGTGCTGATAA+GGG | - | chr1_4:17647306-17647325 | Msa0153770:intron | 25.0% |
| !!! | AATTAGCTAGAAGTATGTTT+TGG | - | chr1_4:17647355-17647374 | Msa0153770:intron | 25.0% |
| ! | CTACAAAACAGTTTCTATAA+TGG | + | chr1_4:17647475-17647494 | None:intergenic | 25.0% |
| !! | TTTGAAATGTAATATGCTCA+TGG | - | chr1_4:17647519-17647538 | Msa0153770:intron | 25.0% |
| ! | ACACAAAAACTTCTTCAAAA+AGG | + | chr1_4:17647679-17647698 | None:intergenic | 25.0% |
| !!! | CAATAGTTTTATCGAATGAA+AGG | + | chr1_4:17647927-17647946 | None:intergenic | 25.0% |
| !!! | AAAATGGATACTTTTGTTTG+TGG | - | chr1_4:17648036-17648055 | Msa0153770:intron | 25.0% |
| !! | TCATAGCTTTTGTAATTCTT+TGG | - | chr1_4:17648109-17648128 | Msa0153770:intron | 25.0% |
| !! | AGCTCTCTTTTATATATCAA+GGG | - | chr1_4:17648445-17648464 | Msa0153770:intron | 25.0% |
| ! | TTTGAGAAAAATCTTGATAC+AGG | + | chr1_4:17648564-17648583 | None:intergenic | 25.0% |
| !! | AGTGTTTGTGTCTTTTATAT+AGG | - | chr1_4:17648673-17648692 | Msa0153770:intron | 25.0% |
| !! | CAAGTATATATATTTTGTGG+TGG | + | chr1_4:17648723-17648742 | None:intergenic | 25.0% |
| !! | ATTTTGGGAAAACCTAAGTT+AGG | - | chr1_4:17642633-17642652 | Msa0153770:CDS | 30.0% |
| ! | TCTCTACATTTTCCTAACTT+AGG | + | chr1_4:17642648-17642667 | None:intergenic | 30.0% |
| !!! | GATTAAGGAGATTTTAGGTT+AGG | - | chr1_4:17642765-17642784 | Msa0153770:CDS | 30.0% |
| TATGTTAGTTACGTTGAGAA+CGG | + | chr1_4:17642827-17642846 | None:intergenic | 30.0% | |
| !!! | AGTGTCTTTATTTTCTGTTC+TGG | + | chr1_4:17643211-17643230 | None:intergenic | 30.0% |
| GAAGAGTTCATAGTAGAATT+GGG | - | chr1_4:17643313-17643332 | Msa0153770:intron | 30.0% | |
| AGAAAAAACCAATAGAACAG+TGG | - | chr1_4:17643376-17643395 | Msa0153770:intron | 30.0% | |
| GTTATAAATTAACGTGAGAG+AGG | - | chr1_4:17643398-17643417 | Msa0153770:intron | 30.0% | |
| CTAAATTTACCCATAAACTG+TGG | + | chr1_4:17643473-17643492 | None:intergenic | 30.0% | |
| !! | TGCTTAGTTTGTTATTGTGA+AGG | - | chr1_4:17643507-17643526 | Msa0153770:intron | 30.0% |
| !! | GCTTAGTTTGTTATTGTGAA+GGG | - | chr1_4:17643508-17643527 | Msa0153770:intron | 30.0% |
| ! | ATGAACTGTTTCAGAGTTTT+AGG | - | chr1_4:17643565-17643584 | Msa0153770:intron | 30.0% |
| !! | TGTTAGCCTACGTATTTTTA+GGG | - | chr1_4:17643588-17643607 | Msa0153770:intron | 30.0% |
| !!! | CTACGTATTTTTAGGGTTTT+GGG | - | chr1_4:17643595-17643614 | Msa0153770:intron | 30.0% |
| ! | GGGAGGCTAAATATATTTTT+AGG | - | chr1_4:17643615-17643634 | Msa0153770:intron | 30.0% |
| ! | ATTGGGTTAGAATTGAATTC+TGG | + | chr1_4:17643719-17643738 | None:intergenic | 30.0% |
| TTGCAAAATCATTTGATCCT+AGG | - | chr1_4:17643764-17643783 | Msa0153770:intron | 30.0% | |
| TGTGGTTGAAAAAGATAACA+TGG | + | chr1_4:17643846-17643865 | None:intergenic | 30.0% | |
| ! | ATTATAGATGATGATGCTGA+TGG | - | chr1_4:17644015-17644034 | Msa0153770:intron | 30.0% |
| ! | GTGAAAGACAAGTTTTTCTT+TGG | - | chr1_4:17644133-17644152 | Msa0153770:intron | 30.0% |
| TTTCATAGCCTAAAAGACAA+TGG | - | chr1_4:17644205-17644224 | Msa0153770:intron | 30.0% | |
| AGTTGTATGGAGAAAGTAAT+TGG | + | chr1_4:17644263-17644282 | None:intergenic | 30.0% | |
| GAAGCAATATGAAAGTTGTA+TGG | + | chr1_4:17644276-17644295 | None:intergenic | 30.0% | |
| GCTAGTAGAAGAATTATAGA+AGG | + | chr1_4:17644523-17644542 | None:intergenic | 30.0% | |
| ! | GCTACATAATTTTCAAACTG+TGG | + | chr1_4:17644613-17644632 | None:intergenic | 30.0% |
| TGAAAATTATGTAGCTTCCT+TGG | - | chr1_4:17644618-17644637 | Msa0153770:CDS | 30.0% | |
| TTGCTCTTGTAATCACATAT+AGG | - | chr1_4:17644641-17644660 | Msa0153770:CDS | 30.0% | |
| AATCACATATAGGAGCAATA+TGG | - | chr1_4:17644651-17644670 | Msa0153770:CDS | 30.0% | |
| AATCAAATTCTGGTCAACAA+GGG | + | chr1_4:17644932-17644951 | None:intergenic | 30.0% | |
| AAATCAAATTCTGGTCAACA+AGG | + | chr1_4:17644933-17644952 | None:intergenic | 30.0% | |
| AATTCAACCTCAAATGGAAA+CGG | + | chr1_4:17644995-17645014 | None:intergenic | 30.0% | |
| AAATTCAAATTGGGAGTTGA+TGG | - | chr1_4:17645021-17645040 | Msa0153770:intron | 30.0% | |
| TACCTCACAATCTCATTATT+TGG | - | chr1_4:17645603-17645622 | Msa0153770:intron | 30.0% | |
| TTATGAAACCTAAGTCAAGT+TGG | + | chr1_4:17645857-17645876 | None:intergenic | 30.0% | |
| ! | TGTTTCTAAAGGGTTCTTAT+GGG | + | chr1_4:17645980-17645999 | None:intergenic | 30.0% |
| ! | ATGTTTCTAAAGGGTTCTTA+TGG | + | chr1_4:17645981-17646000 | None:intergenic | 30.0% |
| TACACAAATAAAGTGTGGAT+TGG | - | chr1_4:17646215-17646234 | Msa0153770:intron | 30.0% | |
| ! | AAAAAAGGAAAGTGTAGCTA+TGG | + | chr1_4:17646561-17646580 | None:intergenic | 30.0% |
| GAACACCACCAAATATATTA+TGG | - | chr1_4:17646606-17646625 | Msa0153770:intron | 30.0% | |
| ACACCACCAAATATATTATG+GGG | - | chr1_4:17646608-17646627 | Msa0153770:intron | 30.0% | |
| TAGCTTCCCCATAATATATT+TGG | + | chr1_4:17646617-17646636 | None:intergenic | 30.0% | |
| ! | GACAGAATGTATAATTTTCG+AGG | + | chr1_4:17646661-17646680 | None:intergenic | 30.0% |
| !! | AGGTAATGGAAACTTACAAA+TGG | + | chr1_4:17646767-17646786 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTGAGGGGATTTC+AGG | + | chr1_4:17646888-17646907 | None:intergenic | 30.0% |
| TTACTTAGGAAGTTCCTTTA+AGG | + | chr1_4:17646933-17646952 | None:intergenic | 30.0% | |
| !! | AGGGTATTGTGTTATAGTTA+TGG | - | chr1_4:17647031-17647050 | Msa0153770:intron | 30.0% |
| ! | GGGTATTGTGTTATAGTTAT+GGG | - | chr1_4:17647032-17647051 | Msa0153770:intron | 30.0% |
| GGTATTGTGTTATAGTTATG+GGG | - | chr1_4:17647033-17647052 | Msa0153770:intron | 30.0% | |
| CGAACTTTGAATGTAATGAT+TGG | - | chr1_4:17647099-17647118 | Msa0153770:intron | 30.0% | |
| TAATATATGGGAAAACCATG+AGG | + | chr1_4:17647171-17647190 | None:intergenic | 30.0% | |
| ! | GATTAAAGATTGTGCTGATA+AGG | - | chr1_4:17647305-17647324 | Msa0153770:intron | 30.0% |
| ! | TTAAAGATTGTGCTGATAAG+GGG | - | chr1_4:17647307-17647326 | Msa0153770:intron | 30.0% |
| GCTAATTAAATTATCCTTCC+AGG | + | chr1_4:17647342-17647361 | None:intergenic | 30.0% | |
| !!! | ATGCTGTTTCAGTTTTGAAA+TGG | - | chr1_4:17647699-17647718 | Msa0153770:intron | 30.0% |
| !! | GGTTTTTAAGGGTACATAAA+AGG | + | chr1_4:17647735-17647754 | None:intergenic | 30.0% |
| !!! | AAATTTTGAGGCACCAAAAT+GGG | + | chr1_4:17647756-17647775 | None:intergenic | 30.0% |
| !!! | AAAATTTTGAGGCACCAAAA+TGG | + | chr1_4:17647757-17647776 | None:intergenic | 30.0% |
| ACCTATGAACTGTGTTAAAA+TGG | - | chr1_4:17648020-17648039 | Msa0153770:intron | 30.0% | |
| !! | TCCATTTTAACACAGTTCAT+AGG | + | chr1_4:17648024-17648043 | None:intergenic | 30.0% |
| TTTGTAATTCTTTGGCAGAT+TGG | - | chr1_4:17648117-17648136 | Msa0153770:intron | 30.0% | |
| TATATGCTAGCATGCATATT+TGG | - | chr1_4:17648229-17648248 | Msa0153770:intron | 30.0% | |
| ! | TAGGATTGAGTGTTCTTTTA+TGG | - | chr1_4:17648418-17648437 | Msa0153770:intron | 30.0% |
| ! | CAGCTCTCTTTTATATATCA+AGG | - | chr1_4:17648444-17648463 | Msa0153770:intron | 30.0% |
| ATACATAAGATGAATCTGTC+AGG | - | chr1_4:17648610-17648629 | Msa0153770:intron | 30.0% | |
| !!! | GGTCTTCTCTGAAATTTTTT+TGG | + | chr1_4:17648702-17648721 | None:intergenic | 30.0% |
| !! | GAAATTGAGAGTGTCGATTT+CGG | + | chr1_4:17642447-17642466 | None:intergenic | 35.0% |
| ! | TAGAGTGATAAGTAGGTTGA+GGG | - | chr1_4:17642791-17642810 | Msa0153770:CDS | 35.0% |
| !!! | GTCTTTATTTTCTGTTCTGG+CGG | + | chr1_4:17643208-17643227 | None:intergenic | 35.0% |
| AACTGAAGTCATTGATGTGA+TGG | - | chr1_4:17643250-17643269 | Msa0153770:intron | 35.0% | |
| GGAAGAGTTCATAGTAGAAT+TGG | - | chr1_4:17643312-17643331 | Msa0153770:intron | 35.0% | |
| !! | GTGTTAGCCTACGTATTTTT+AGG | - | chr1_4:17643587-17643606 | Msa0153770:intron | 35.0% |
| CCAAAACCCTAAAAATACGT+AGG | + | chr1_4:17643597-17643616 | None:intergenic | 35.0% | |
| !!! | CCTACGTATTTTTAGGGTTT+TGG | - | chr1_4:17643594-17643613 | Msa0153770:intron | 35.0% |
| !!! | ACCGTTTCTGTGTTTTTTCA+TGG | - | chr1_4:17643675-17643694 | Msa0153770:intron | 35.0% |
| GCCATGAAAAAACACAGAAA+CGG | + | chr1_4:17643679-17643698 | None:intergenic | 35.0% | |
| GGTTAGAATTGAATTCTGGT+TGG | + | chr1_4:17643715-17643734 | None:intergenic | 35.0% | |
| CTACTTTGTGTGCTTGAATT+GGG | + | chr1_4:17643736-17643755 | None:intergenic | 35.0% | |
| ACTACTTTGTGTGCTTGAAT+TGG | + | chr1_4:17643737-17643756 | None:intergenic | 35.0% | |
| !! | GGTTTGTTACCATTTGAAAG+TGG | + | chr1_4:17643825-17643844 | None:intergenic | 35.0% |
| TAACAATATGTAAAGGGGAC+AGG | + | chr1_4:17643992-17644011 | None:intergenic | 35.0% | |
| TATACCTTGTGTGTATCAGT+TGG | - | chr1_4:17644100-17644119 | Msa0153770:intron | 35.0% | |
| TAATCCAACTGATACACACA+AGG | + | chr1_4:17644107-17644126 | None:intergenic | 35.0% | |
| ! | CTAACATGCCATTGTCTTTT+AGG | + | chr1_4:17644216-17644235 | None:intergenic | 35.0% |
| ! | GGAGAAAGTAATTGGTGTTT+GGG | + | chr1_4:17644255-17644274 | None:intergenic | 35.0% |
| ! | TGGAGAAAGTAATTGGTGTT+TGG | + | chr1_4:17644256-17644275 | None:intergenic | 35.0% |
| TTCCTAAAACTATATGGACG+AGG | - | chr1_4:17644304-17644323 | Msa0153770:intron | 35.0% | |
| TACGGTGTACTCTTCATTTA+GGG | + | chr1_4:17644392-17644411 | None:intergenic | 35.0% | |
| ATACGGTGTACTCTTCATTT+AGG | + | chr1_4:17644393-17644412 | None:intergenic | 35.0% | |
| ATAATTATGAGACAACCTGC+TGG | - | chr1_4:17644688-17644707 | Msa0153770:intron | 35.0% | |
| TAATTATGAGACAACCTGCT+GGG | - | chr1_4:17644689-17644708 | Msa0153770:intron | 35.0% | |
| ACATTTGAATATGGATGCAC+CGG | + | chr1_4:17644742-17644761 | None:intergenic | 35.0% | |
| CATCCATATTCAAATGTGGT+TGG | - | chr1_4:17644745-17644764 | Msa0153770:intron | 35.0% | |
| ACACCAACCACATTTGAATA+TGG | + | chr1_4:17644751-17644770 | None:intergenic | 35.0% | |
| ! | ATATTCAAATGTGGTTGGTG+TGG | - | chr1_4:17644750-17644769 | Msa0153770:intron | 35.0% |
| GGGTGACAACAAATAAAAGT+AGG | + | chr1_4:17644912-17644931 | None:intergenic | 35.0% | |
| ATTCAACCTCAAATGGAAAC+GGG | + | chr1_4:17644994-17645013 | None:intergenic | 35.0% | |
| TTCATGGCTTCTTTAAGTGT+TGG | + | chr1_4:17645266-17645285 | None:intergenic | 35.0% | |
| ATGGGATAAAGTGATCTTCA+TGG | + | chr1_4:17645282-17645301 | None:intergenic | 35.0% | |
| ATAATGAGATTGTGAGGTAG+AGG | + | chr1_4:17645602-17645621 | None:intergenic | 35.0% | |
| AGCCAAATAATGAGATTGTG+AGG | + | chr1_4:17645608-17645627 | None:intergenic | 35.0% | |
| AATAAGAAACCCTAGTGAGA+AGG | + | chr1_4:17645633-17645652 | None:intergenic | 35.0% | |
| TGTGATAAAGTTTGCCTTTG+AGG | - | chr1_4:17645668-17645687 | Msa0153770:intron | 35.0% | |
| GTGATAAAGTTTGCCTTTGA+GGG | - | chr1_4:17645669-17645688 | Msa0153770:intron | 35.0% | |
| ! | GCATACTAATTCTAGCTAAG+AGG | + | chr1_4:17645832-17645851 | None:intergenic | 35.0% |
| ! | GTTTCTAAAGGGTTCTTATG+GGG | + | chr1_4:17645979-17645998 | None:intergenic | 35.0% |
| ! | ACCATGCTCATGTTTCTAAA+GGG | + | chr1_4:17645990-17646009 | None:intergenic | 35.0% |
| GACATCATAATCCATCACTT+AGG | - | chr1_4:17646064-17646083 | Msa0153770:intron | 35.0% | |
| TCATAATCCATCACTTAGGT+TGG | - | chr1_4:17646068-17646087 | Msa0153770:intron | 35.0% | |
| AATACTACCAACCTAAGTGA+TGG | + | chr1_4:17646078-17646097 | None:intergenic | 35.0% | |
| ! | TTGTCAAGTCTCTTTTCTTG+CGG | - | chr1_4:17646111-17646130 | Msa0153770:intron | 35.0% |
| ! | ATTCAGTGTTCTTGCTATCA+TGG | - | chr1_4:17646343-17646362 | Msa0153770:CDS | 35.0% |
| ! | TCTTCTCTGTCAGTCTTTTA+TGG | - | chr1_4:17646501-17646520 | Msa0153770:intron | 35.0% |
| ! | CTTCTCTGTCAGTCTTTTAT+GGG | - | chr1_4:17646502-17646521 | Msa0153770:intron | 35.0% |
| ! | TTCTCTGTCAGTCTTTTATG+GGG | - | chr1_4:17646503-17646522 | Msa0153770:intron | 35.0% |
| AAATGCTGCAAGGCTAAAAA+AGG | + | chr1_4:17646576-17646595 | None:intergenic | 35.0% | |
| !!! | TTTTTAGCCTTGCAGCATTT+AGG | - | chr1_4:17646576-17646595 | Msa0153770:intron | 35.0% |
| CTTCCCCATAATATATTTGG+TGG | + | chr1_4:17646614-17646633 | None:intergenic | 35.0% | |
| TTCATGCGGAAAATGTATAC+TGG | - | chr1_4:17646724-17646743 | Msa0153770:intron | 35.0% | |
| CAGCTAAGACAATCTTACTT+AGG | + | chr1_4:17646947-17646966 | None:intergenic | 35.0% | |
| GTGTTATAGTTATGGGGTTA+TGG | - | chr1_4:17647039-17647058 | Msa0153770:intron | 35.0% | |
| TTATGGGGTTATGGTTCTTA+AGG | - | chr1_4:17647048-17647067 | Msa0153770:intron | 35.0% | |
| TATGGGGTTATGGTTCTTAA+GGG | - | chr1_4:17647049-17647068 | Msa0153770:intron | 35.0% | |
| AGCTTCTGTTATTCTTGTCT+AGG | - | chr1_4:17647145-17647164 | Msa0153770:intron | 35.0% | |
| ! | AGACATGATTTTCTATACCG+AGG | - | chr1_4:17647239-17647258 | Msa0153770:intron | 35.0% |
| AACTTCTTCAAAAAGGTTCC+AGG | + | chr1_4:17647672-17647691 | None:intergenic | 35.0% | |
| ! | GTACCCTTAAAAACCCATTT+TGG | - | chr1_4:17647740-17647759 | Msa0153770:intron | 35.0% |
| !! | GCACCAAAATGGGTTTTTAA+GGG | + | chr1_4:17647746-17647765 | None:intergenic | 35.0% |
| TCCCTGACTCATTATAAAAG+AGG | - | chr1_4:17647854-17647873 | Msa0153770:intron | 35.0% | |
| ! | CCCTCTTTTATAATGAGTCA+GGG | + | chr1_4:17647858-17647877 | None:intergenic | 35.0% |
| CCCTGACTCATTATAAAAGA+GGG | - | chr1_4:17647855-17647874 | Msa0153770:intron | 35.0% | |
| ! | TCCCTCTTTTATAATGAGTC+AGG | + | chr1_4:17647859-17647878 | None:intergenic | 35.0% |
| TGATTGCAACTATGAAGTCA+AGG | + | chr1_4:17647998-17648017 | None:intergenic | 35.0% | |
| !! | GATACTTTTGTTTGTGGCTA+TGG | - | chr1_4:17648042-17648061 | Msa0153770:intron | 35.0% |
| TGAACAAACTAACCAAGACA+GGG | + | chr1_4:17648092-17648111 | None:intergenic | 35.0% | |
| ATGAACAAACTAACCAAGAC+AGG | + | chr1_4:17648093-17648112 | None:intergenic | 35.0% | |
| AACACTCGCGATAAAAAGAT+AGG | + | chr1_4:17648388-17648407 | None:intergenic | 35.0% | |
| ATCGACACTCTCAATTTCCA+TGG | - | chr1_4:17642449-17642468 | Msa0153770:three_prime_UTR | 40.0% | |
| TAGGGAGTAGAGTGATAAGT+AGG | - | chr1_4:17642784-17642803 | Msa0153770:CDS | 40.0% | |
| GTAGAGTGATAAGTAGGTTG+AGG | - | chr1_4:17642790-17642809 | Msa0153770:CDS | 40.0% | |
| TCGAGATCCTAGGTAAAATC+AGG | - | chr1_4:17642994-17643013 | Msa0153770:CDS | 40.0% | |
| CGAGATCCTAGGTAAAATCA+GGG | - | chr1_4:17642995-17643014 | Msa0153770:CDS | 40.0% | |
| ATCCTAGGTAAAATCAGGGA+GGG | - | chr1_4:17642999-17643018 | Msa0153770:CDS | 40.0% | |
| TGCAGATTGCACAGAACAAA+GGG | - | chr1_4:17643291-17643310 | Msa0153770:intron | 40.0% | |
| GAGTTCATAGTAGAATTGGG+TGG | - | chr1_4:17643316-17643335 | Msa0153770:intron | 40.0% | |
| TTGAGTAGTGCTACGAATCT+GGG | - | chr1_4:17643424-17643443 | Msa0153770:intron | 40.0% | |
| ! | ATCTGGGTGAATTGTTGCTT+TGG | - | chr1_4:17643440-17643459 | Msa0153770:intron | 40.0% |
| !! | GGTGAATTGTTGCTTTGGTA+AGG | - | chr1_4:17643445-17643464 | Msa0153770:intron | 40.0% |
| !!! | CGTATTTTTAGGGTTTTGGG+AGG | - | chr1_4:17643598-17643617 | Msa0153770:intron | 40.0% |
| AATCATTTGATCCTAGGAGC+AGG | - | chr1_4:17643770-17643789 | Msa0153770:intron | 40.0% | |
| !!! | GATTGCGATTTTGACTACCT+TGG | - | chr1_4:17643792-17643811 | Msa0153770:intron | 40.0% |
| TTGAAAGTGGCAAACATCCA+AGG | + | chr1_4:17643812-17643831 | None:intergenic | 40.0% | |
| !! | GGATGTTTGCCACTTTCAAA+TGG | - | chr1_4:17643813-17643832 | Msa0153770:intron | 40.0% |
| TTTCTTTGGCATCATTGTGC+CGG | - | chr1_4:17644147-17644166 | Msa0153770:intron | 40.0% | |
| AGGCTATGAAACACTAACAC+AGG | + | chr1_4:17644196-17644215 | None:intergenic | 40.0% | |
| ! | GAAAGTAATTGGTGTTTGGG+TGG | + | chr1_4:17644252-17644271 | None:intergenic | 40.0% |
| ! | CTCCTCGTCCATATAGTTTT+AGG | + | chr1_4:17644309-17644328 | None:intergenic | 40.0% |
| ACGGTGTACTCTTCATTTAG+GGG | + | chr1_4:17644391-17644410 | None:intergenic | 40.0% | |
| ACAGCCATGAAGTAATGACT+GGG | + | chr1_4:17644566-17644585 | None:intergenic | 40.0% | |
| AACAGCCATGAAGTAATGAC+TGG | + | chr1_4:17644567-17644586 | None:intergenic | 40.0% | |
| TGTGATTACAAGAGCAACCA+AGG | + | chr1_4:17644638-17644657 | None:intergenic | 40.0% | |
| ATAGGAGCAATATGGAACTG+AGG | - | chr1_4:17644659-17644678 | Msa0153770:CDS | 40.0% | |
| TAGGAGCAATATGGAACTGA+GGG | - | chr1_4:17644660-17644679 | Msa0153770:CDS | 40.0% | |
| AATTATGAGACAACCTGCTG+GGG | - | chr1_4:17644690-17644709 | Msa0153770:intron | 40.0% | |
| GGTGCATCCATATTCAAATG+TGG | - | chr1_4:17644741-17644760 | Msa0153770:intron | 40.0% | |
| !!! | TTTGATTTTCCTCTGGGACT+AGG | - | chr1_4:17644950-17644969 | Msa0153770:intron | 40.0% |
| TTCAACCTCAAATGGAAACG+GGG | + | chr1_4:17644993-17645012 | None:intergenic | 40.0% | |
| TGCTTTGGTCATAGCAGTTT+AGG | - | chr1_4:17645073-17645092 | Msa0153770:intron | 40.0% | |
| AACATAATCCCTTTCCCACT+AGG | - | chr1_4:17645444-17645463 | Msa0153770:intron | 40.0% | |
| ! | ATTGTGAGGTAGAGGTATAG+GGG | + | chr1_4:17645594-17645613 | None:intergenic | 40.0% |
| ! | GATTGTGAGGTAGAGGTATA+GGG | + | chr1_4:17645595-17645614 | None:intergenic | 40.0% |
| ! | AGATTGTGAGGTAGAGGTAT+AGG | + | chr1_4:17645596-17645615 | None:intergenic | 40.0% |
| ATTTGGCTATCCTTCTCACT+AGG | - | chr1_4:17645620-17645639 | Msa0153770:intron | 40.0% | |
| TTTGGCTATCCTTCTCACTA+GGG | - | chr1_4:17645621-17645640 | Msa0153770:intron | 40.0% | |
| AGAGGCAAACATAGGATTCA+CGG | + | chr1_4:17645724-17645743 | None:intergenic | 40.0% | |
| ATATAGGGAGAGGCAAACAT+AGG | + | chr1_4:17645732-17645751 | None:intergenic | 40.0% | |
| TTATGGGGAAATATAGGGAG+AGG | + | chr1_4:17645742-17645761 | None:intergenic | 40.0% | |
| TACTTAAACAACGAGACTCG+TGG | - | chr1_4:17645783-17645802 | Msa0153770:intron | 40.0% | |
| TCTAGCTAAGAGGTGAAAAC+TGG | + | chr1_4:17645822-17645841 | None:intergenic | 40.0% | |
| GTATGCTTCCAACTTGACTT+AGG | - | chr1_4:17645846-17645865 | Msa0153770:intron | 40.0% | |
| GAGATAAGCTTCGAAAACAC+AGG | + | chr1_4:17645909-17645928 | None:intergenic | 40.0% | |
| TGCTGAATGTCATCCTCTTT+AGG | - | chr1_4:17645943-17645962 | Msa0153770:intron | 40.0% | |
| ! | ACCCTTTAGAAACATGAGCA+TGG | - | chr1_4:17645986-17646005 | Msa0153770:intron | 40.0% |
| ! | GACCATGCTCATGTTTCTAA+AGG | + | chr1_4:17645991-17646010 | None:intergenic | 40.0% |
| TGTGATTCAAAACACGAGCA+TGG | - | chr1_4:17646174-17646193 | Msa0153770:intron | 40.0% | |
| !! | GTGGATTGGCTATGAAAAGA+TGG | - | chr1_4:17646229-17646248 | Msa0153770:intron | 40.0% |
| TGATGAGCATCAATTACAGC+AGG | + | chr1_4:17646277-17646296 | None:intergenic | 40.0% | |
| TGCTGTAATTGATGCTCATC+AGG | - | chr1_4:17646276-17646295 | Msa0153770:intron | 40.0% | |
| GACTGACAGAGAAGACTATA+GGG | + | chr1_4:17646496-17646515 | None:intergenic | 40.0% | |
| AGACTGACAGAGAAGACTAT+AGG | + | chr1_4:17646497-17646516 | None:intergenic | 40.0% | |
| CGGAAAATGTATACTGGACA+TGG | - | chr1_4:17646730-17646749 | Msa0153770:intron | 40.0% | |
| TGCTAATGCAGAAGAACTTC+AGG | - | chr1_4:17647011-17647030 | Msa0153770:intron | 40.0% | |
| GCTAATGCAGAAGAACTTCA+GGG | - | chr1_4:17647012-17647031 | Msa0153770:intron | 40.0% | |
| ATGGGGTTATGGTTCTTAAG+GGG | - | chr1_4:17647050-17647069 | Msa0153770:intron | 40.0% | |
| TTATTCTTGTCTAGGCCTCA+TGG | - | chr1_4:17647153-17647172 | Msa0153770:intron | 40.0% | |
| GACAGATGATACAAGAGAAC+AGG | + | chr1_4:17647207-17647226 | None:intergenic | 40.0% | |
| !! | ACCGAGGTTTTATGTTGAAC+TGG | - | chr1_4:17647255-17647274 | Msa0153770:intron | 40.0% |
| GCCAGTTCAACATAAAACCT+CGG | + | chr1_4:17647259-17647278 | None:intergenic | 40.0% | |
| TTAGTTAGATGCACTCCCAT+TGG | - | chr1_4:17647387-17647406 | Msa0153770:intron | 40.0% | |
| AAACCACAGGAAATGGTTTG+AGG | + | chr1_4:17647648-17647667 | None:intergenic | 40.0% | |
| !! | GGCACCAAAATGGGTTTTTA+AGG | + | chr1_4:17647747-17647766 | None:intergenic | 40.0% |
| CTTCGTTTGCTTCCTCATTT+CGG | - | chr1_4:17648170-17648189 | Msa0153770:intron | 40.0% | |
| AAACAGCGTAGATCTCAAGA+AGG | + | chr1_4:17648340-17648359 | None:intergenic | 40.0% | |
| !! | CTGTCAGGTTTTGTAGTCAA+TGG | - | chr1_4:17648625-17648644 | Msa0153770:intron | 40.0% |
| AGGAGAAGAAGAAGAAGCCA+TGG | + | chr1_4:17642469-17642488 | None:intergenic | 45.0% | |
| TTCTTCTTCTTCTCCTCACG+AGG | - | chr1_4:17642473-17642492 | Msa0153770:three_prime_UTR | 45.0% | |
| TAGATGGAACAAACCTCGTG+AGG | + | chr1_4:17642489-17642508 | None:intergenic | 45.0% | |
| GATCCTAGGTAAAATCAGGG+AGG | - | chr1_4:17642998-17643017 | Msa0153770:CDS | 45.0% | |
| TCCTAGGTAAAATCAGGGAG+GGG | - | chr1_4:17643000-17643019 | Msa0153770:CDS | 45.0% | |
| GTGCAGATTGCACAGAACAA+AGG | - | chr1_4:17643290-17643309 | Msa0153770:intron | 45.0% | |
| GTTGAGTAGTGCTACGAATC+TGG | - | chr1_4:17643423-17643442 | Msa0153770:intron | 45.0% | |
| TGGTAAGGCTCCACAGTTTA+TGG | - | chr1_4:17643460-17643479 | Msa0153770:intron | 45.0% | |
| GGTAAGGCTCCACAGTTTAT+GGG | - | chr1_4:17643461-17643480 | Msa0153770:intron | 45.0% | |
| AAAATCGCAATCCTGCTCCT+AGG | + | chr1_4:17643784-17643803 | None:intergenic | 45.0% | |
| ! | GTAAAGGGGACAGGAGATTT+TGG | + | chr1_4:17643983-17644002 | None:intergenic | 45.0% |
| CAGCCATGAAGTAATGACTG+GGG | + | chr1_4:17644565-17644584 | None:intergenic | 45.0% | |
| TTGAATATGGATGCACCGGA+TGG | + | chr1_4:17644738-17644757 | None:intergenic | 45.0% | |
| AAAATGAGACCTAGTCCCAG+AGG | + | chr1_4:17644962-17644981 | None:intergenic | 45.0% | |
| GTTTACCCCGTTTCCATTTG+AGG | - | chr1_4:17644985-17645004 | Msa0153770:intron | 45.0% | |
| !! | CAAATTGGGAGTTGATGGAG+TGG | - | chr1_4:17645026-17645045 | Msa0153770:intron | 45.0% |
| TAACCTCACCTAGTGGGAAA+GGG | + | chr1_4:17645455-17645474 | None:intergenic | 45.0% | |
| TTAACCTCACCTAGTGGGAA+AGG | + | chr1_4:17645456-17645475 | None:intergenic | 45.0% | |
| GTAGCTTAACCTCACCTAGT+GGG | + | chr1_4:17645461-17645480 | None:intergenic | 45.0% | |
| TGTAGCTTAACCTCACCTAG+TGG | + | chr1_4:17645462-17645481 | None:intergenic | 45.0% | |
| AATACTTCGAGCACCCTCAA+AGG | + | chr1_4:17645685-17645704 | None:intergenic | 45.0% | |
| GAGGCAAACATAGGATTCAC+GGG | + | chr1_4:17645723-17645742 | None:intergenic | 45.0% | |
| AAACAACGAGACTCGTGGTA+CGG | - | chr1_4:17645788-17645807 | Msa0153770:intron | 45.0% | |
| ATTCAGCAGCACTAGAGCTA+TGG | + | chr1_4:17645931-17645950 | None:intergenic | 45.0% | |
| TCTTGCGGCTCATAGAATTG+AGG | - | chr1_4:17646126-17646145 | Msa0153770:intron | 45.0% | |
| CGAGCATGGTCATTACTTTG+TGG | - | chr1_4:17646188-17646207 | Msa0153770:intron | 45.0% | |
| !!! | TTTTTTCAGTTGGAGGGGTG+TGG | - | chr1_4:17646462-17646481 | Msa0153770:CDS | 45.0% |
| !! | TTTTTCAGTTGGAGGGGTGT+GGG | - | chr1_4:17646463-17646482 | Msa0153770:CDS | 45.0% |
| ! | TGATGTGCTCTAGGTGACTT+TGG | + | chr1_4:17646698-17646717 | None:intergenic | 45.0% |
| GAACGACAATGATGTGCTCT+AGG | + | chr1_4:17646707-17646726 | None:intergenic | 45.0% | |
| GCACATCATTGTCGTTCATG+CGG | - | chr1_4:17646710-17646729 | Msa0153770:intron | 45.0% | |
| ATGGTTCTTAAGGGGCTCAA+AGG | - | chr1_4:17647058-17647077 | Msa0153770:intron | 45.0% | |
| ! | AGATTGTGCTGATAAGGGGA+TGG | - | chr1_4:17647311-17647330 | Msa0153770:intron | 45.0% |
| GAGTGCATCTAACTAAGCAC+TGG | + | chr1_4:17647383-17647402 | None:intergenic | 45.0% | |
| AAGCCTCAAACCATTTCCTG+TGG | - | chr1_4:17647642-17647661 | Msa0153770:intron | 45.0% | |
| ! | ACCATTTCCTGTGGTTTTCC+TGG | - | chr1_4:17647651-17647670 | Msa0153770:intron | 45.0% |
| TCCAGGAAAACCACAGGAAA+TGG | + | chr1_4:17647655-17647674 | None:intergenic | 45.0% | |
| AAAGGTTCCAGGAAAACCAC+AGG | + | chr1_4:17647661-17647680 | None:intergenic | 45.0% | |
| ! | GGTGCCTCAAAATTTTCTCG+CGG | - | chr1_4:17647761-17647780 | Msa0153770:intron | 45.0% |
| ! | GTTTCTAACTTGCCCTGTCT+TGG | - | chr1_4:17648077-17648096 | Msa0153770:intron | 45.0% |
| TAAGTCTCCATGCTAGATCC+CGG | + | chr1_4:17648299-17648318 | None:intergenic | 45.0% | |
| !! | ACGCTGTTTCTATCGTCTAG+AGG | - | chr1_4:17648351-17648370 | Msa0153770:intron | 45.0% |
| GCGAGTGTTTCATTGCAGAT+AGG | - | chr1_4:17648399-17648418 | Msa0153770:intron | 45.0% | |
| ! | ACTTCCGTGTTACTCAGAAG+AGG | - | chr1_4:17648583-17648602 | Msa0153770:intron | 45.0% |
| !!! | TTTTTTTTTTTTTTTTTTGA+GGG | + | chr1_4:17646897-17646916 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+AGG | + | chr1_4:17646898-17646917 | None:intergenic | 5.0% |
| ACGCGTGTGTGTGTTTACCT+GGG | + | chr1_4:17642402-17642421 | None:intergenic | 50.0% | |
| AACGCGTGTGTGTGTTTACC+TGG | + | chr1_4:17642403-17642422 | None:intergenic | 50.0% | |
| GTAGTCAGACTCGAGATCCT+AGG | - | chr1_4:17642984-17643003 | Msa0153770:CDS | 50.0% | |
| ! | ACCCCTCCCTGATTTTACCT+AGG | + | chr1_4:17643004-17643023 | None:intergenic | 50.0% |
| TCTAGATCCTGGTCCTGAAC+CGG | - | chr1_4:17643025-17643044 | Msa0153770:intron | 50.0% | |
| ACTGCACACGACACTAACAC+CGG | + | chr1_4:17644169-17644188 | None:intergenic | 50.0% | |
| TGAAGTAATGACTGGGGCTG+AGG | + | chr1_4:17644559-17644578 | None:intergenic | 50.0% | |
| CAGCCCCAGTCATTACTTCA+TGG | - | chr1_4:17644559-17644578 | Msa0153770:CDS | 50.0% | |
| CTTCGCGTTATGCTTCCATC+CGG | - | chr1_4:17644720-17644739 | Msa0153770:intron | 50.0% | |
| !! | AAACGCGGCCAAAAGTGCTT+CGG | - | chr1_4:17644798-17644817 | Msa0153770:intron | 50.0% |
| AATCCCTTTCCCACTAGGTG+AGG | - | chr1_4:17645449-17645468 | Msa0153770:intron | 50.0% | |
| ! | GTAGAGGTATAGGGGTAGCA+GGG | + | chr1_4:17645586-17645605 | None:intergenic | 50.0% |
| GGGTTGCAGAACACCTAAAG+AGG | + | chr1_4:17645959-17645978 | None:intergenic | 50.0% | |
| CAGCACACCTAAATGCTGCA+AGG | + | chr1_4:17646586-17646605 | None:intergenic | 50.0% | |
| CTTGCAGCATTTAGGTGTGC+TGG | - | chr1_4:17646584-17646603 | Msa0153770:intron | 50.0% | |
| ATTATGGGGAAGCTACCCCA+CGG | - | chr1_4:17646622-17646641 | Msa0153770:intron | 50.0% | |
| GATAAGGGGATGGAGATACC+TGG | - | chr1_4:17647321-17647340 | Msa0153770:intron | 50.0% | |
| TTAGATGCACTCCCATTGGC+AGG | - | chr1_4:17647391-17647410 | Msa0153770:intron | 50.0% | |
| TAGATGCACTCCCATTGGCA+GGG | - | chr1_4:17647392-17647411 | Msa0153770:intron | 50.0% | |
| ! | TGGGCCGCGAGAAAATTTTG+AGG | + | chr1_4:17647768-17647787 | None:intergenic | 50.0% |
| TTGGCAGATTGGCAACTGTG+TGG | - | chr1_4:17648128-17648147 | Msa0153770:intron | 50.0% | |
| TGGCAGATTGGCAACTGTGT+GGG | - | chr1_4:17648129-17648148 | Msa0153770:intron | 50.0% | |
| CCACCATTGTCATACTCCCT+CGG | - | chr1_4:17648252-17648271 | Msa0153770:intron | 50.0% | |
| ATACTCCCTCGGACGCTTAA+AGG | - | chr1_4:17648263-17648282 | Msa0153770:intron | 50.0% | |
| TACTCCCTCGGACGCTTAAA+GGG | - | chr1_4:17648264-17648283 | Msa0153770:intron | 50.0% | |
| CATACCCTTTAAGCGTCCGA+GGG | + | chr1_4:17648271-17648290 | None:intergenic | 50.0% | |
| TCATACCCTTTAAGCGTCCG+AGG | + | chr1_4:17648272-17648291 | None:intergenic | 50.0% | |
| ! | GGACGCTTAAAGGGTATGAC+TGG | - | chr1_4:17648273-17648292 | Msa0153770:intron | 50.0% |
| ! | GCTTAAAGGGTATGACTGGC+CGG | - | chr1_4:17648277-17648296 | Msa0153770:intron | 50.0% |
| ! | CTTAAAGGGTATGACTGGCC+GGG | - | chr1_4:17648278-17648297 | Msa0153770:intron | 50.0% |
| CGTGCCTCTTCTGAGTAACA+CGG | + | chr1_4:17648590-17648609 | None:intergenic | 50.0% | |
| CTAGATCCTGGTCCTGAACC+GGG | - | chr1_4:17643026-17643045 | Msa0153770:intron | 55.0% | |
| TAGATCCTGGTCCTGAACCG+GGG | - | chr1_4:17643027-17643046 | Msa0153770:intron | 55.0% | |
| TGAACCGGGGGACTGTTACA+CGG | - | chr1_4:17643040-17643059 | Msa0153770:intron | 55.0% | |
| CAATCCGTGTAACAGTCCCC+CGG | + | chr1_4:17643047-17643066 | None:intergenic | 55.0% | |
| TCTGTTCTGGCGGCTGCATT+GGG | + | chr1_4:17643198-17643217 | None:intergenic | 55.0% | |
| TTCTGTTCTGGCGGCTGCAT+TGG | + | chr1_4:17643199-17643218 | None:intergenic | 55.0% | |
| !! | AACGCGGCCAAAAGTGCTTC+GGG | - | chr1_4:17644799-17644818 | Msa0153770:intron | 55.0% |
| !! | CTCTCCACCCGAAGCACTTT+TGG | + | chr1_4:17644809-17644828 | None:intergenic | 55.0% |
| ! | GGTAGAGGTATAGGGGTAGC+AGG | + | chr1_4:17645587-17645606 | None:intergenic | 55.0% |
| AGGGGATGGAGATACCTGGA+AGG | - | chr1_4:17647325-17647344 | Msa0153770:intron | 55.0% | |
| TTCACCAGAGCCCTGCCAAT+GGG | + | chr1_4:17647405-17647424 | None:intergenic | 55.0% | |
| ATTCACCAGAGCCCTGCCAA+TGG | + | chr1_4:17647406-17647425 | None:intergenic | 55.0% | |
| TGCTCAGCACTGCCGAAATG+AGG | + | chr1_4:17648185-17648204 | None:intergenic | 55.0% | |
| ! | CCGAGGGAGTATGACAATGG+TGG | + | chr1_4:17648255-17648274 | None:intergenic | 55.0% |
| ! | CGTCCGAGGGAGTATGACAA+TGG | + | chr1_4:17648258-17648277 | None:intergenic | 55.0% |
| AGGGAGGGGTCTCTAGATCC+TGG | - | chr1_4:17643014-17643033 | Msa0153770:CDS | 60.0% | |
| AGATCCTGGTCCTGAACCGG+GGG | - | chr1_4:17643028-17643047 | Msa0153770:intron | 60.0% | |
| GTGTAACAGTCCCCCGGTTC+AGG | + | chr1_4:17643041-17643060 | None:intergenic | 60.0% | |
| CGGGGGACTGTTACACGGAT+TGG | - | chr1_4:17643045-17643064 | Msa0153770:intron | 60.0% | |
| CTGTTCTGGCGGCTGCATTG+GGG | + | chr1_4:17643197-17643216 | None:intergenic | 60.0% | |
| GAGACAACCTGCTGGGGTTG+TGG | - | chr1_4:17644696-17644715 | Msa0153770:intron | 60.0% | |
| AGGTCACCTTGCCCTACCGT+GGG | + | chr1_4:17646641-17646660 | None:intergenic | 60.0% | |
| ! | TGACTGGCCGGGATCTAGCA+TGG | - | chr1_4:17648289-17648308 | Msa0153770:intron | 60.0% |
| GCGAAGTCCACAACCCCAGC+AGG | + | chr1_4:17644706-17644725 | None:intergenic | 65.0% | |
| !! | GCGGCCAAAAGTGCTTCGGG+TGG | - | chr1_4:17644802-17644821 | Msa0153770:intron | 65.0% |
| TGGGGAAGCTACCCCACGGT+AGG | - | chr1_4:17646626-17646645 | Msa0153770:intron | 65.0% | |
| GGGGAAGCTACCCCACGGTA+GGG | - | chr1_4:17646627-17646646 | Msa0153770:intron | 65.0% | |
| AGCTACCCCACGGTAGGGCA+AGG | - | chr1_4:17646632-17646651 | Msa0153770:intron | 65.0% | |
| GGTCACCTTGCCCTACCGTG+GGG | + | chr1_4:17646640-17646659 | None:intergenic | 65.0% | |
| GAGGTCACCTTGCCCTACCG+TGG | + | chr1_4:17646642-17646661 | None:intergenic | 65.0% | |
| CACTCCCATTGGCAGGGCTC+TGG | - | chr1_4:17647398-17647417 | Msa0153770:intron | 65.0% | |
| CAGTCCCCCGGTTCAGGACC+AGG | + | chr1_4:17643035-17643054 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 17642399 | 17648769 | 17642399 | ID=Msa0153770;Name=Msa0153770 |
| chr1_4 | mRNA | 17642399 | 17648769 | 17642399 | ID=Msa0153770-mRNA-1;Parent=Msa0153770;Name=Msa0153770-mRNA-1;_AED=0.02;_eAED=0.02;_QI=69|1|1|1|1|1|4|152|343 |
| chr1_4 | exon | 17642399 | 17643033 | 17642399 | ID=Msa0153770-mRNA-1:exon:6640;Parent=Msa0153770-mRNA-1 |
| chr1_4 | exon | 17644399 | 17644697 | 17644399 | ID=Msa0153770-mRNA-1:exon:6639;Parent=Msa0153770-mRNA-1 |
| chr1_4 | exon | 17646283 | 17646505 | 17646283 | ID=Msa0153770-mRNA-1:exon:6638;Parent=Msa0153770-mRNA-1 |
| chr1_4 | exon | 17648674 | 17648769 | 17648674 | ID=Msa0153770-mRNA-1:exon:6637;Parent=Msa0153770-mRNA-1 |
| chr1_4 | five_prime_UTR | 17648701 | 17648769 | 17648701 | ID=Msa0153770-mRNA-1:five_prime_utr;Parent=Msa0153770-mRNA-1 |
| chr1_4 | CDS | 17648674 | 17648700 | 17648674 | ID=Msa0153770-mRNA-1:cds;Parent=Msa0153770-mRNA-1 |
| chr1_4 | CDS | 17646283 | 17646505 | 17646283 | ID=Msa0153770-mRNA-1:cds;Parent=Msa0153770-mRNA-1 |
| chr1_4 | CDS | 17644399 | 17644697 | 17644399 | ID=Msa0153770-mRNA-1:cds;Parent=Msa0153770-mRNA-1 |
| chr1_4 | CDS | 17642551 | 17643033 | 17642551 | ID=Msa0153770-mRNA-1:cds;Parent=Msa0153770-mRNA-1 |
| chr1_4 | three_prime_UTR | 17642399 | 17642550 | 17642399 | ID=Msa0153770-mRNA-1:three_prime_utr;Parent=Msa0153770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
