AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0063900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0063900 MtrunA17_Chr1g0154641 95.735 422 18 0 1 422 17 438 0.0 827
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0063900 AT1G19340.1 54.610 423 177 6 1 418 1 413 1.21e-151 436

Find 125 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCATATGAAAGCCTAATTT+TGG 0.141787 1_2:+24668742 Msa0063900:CDS
AATTTGTCAAACTAGCAATT+TGG 0.190783 1_2:-24669483 None:intergenic
AGAAGAAGGAACGGTGGTTT+TGG 0.197534 1_2:-24665955 None:intergenic
GGCTAGCTAATTCTTTAAAA+AGG 0.240823 1_2:+24669240 Msa0063900:exon
GCTATTTGCTAGAGAAATTA+TGG 0.243019 1_2:+24669150 Msa0063900:CDS
GTGTGAGTAAGTTGCTTAAT+AGG 0.264589 1_2:-24668463 None:intergenic
AATTGCTAGTTTGACAAATT+AGG 0.270371 1_2:+24669486 Msa0063900:three_prime_UTR
TGCTCACAGTATTGCACATT+TGG 0.276460 1_2:-24667256 None:intergenic
CAGGACTGTATCCCAAAATT+AGG 0.282275 1_2:-24668754 None:intergenic
GTTGAAATCGAATGAACTTT+TGG 0.299746 1_2:+24666390 Msa0063900:CDS
ATTTGTCAAACTAGCAATTT+GGG 0.307169 1_2:-24669482 None:intergenic
TGATGATAGTTTATGCCTTA+TGG 0.308292 1_2:+24669274 Msa0063900:three_prime_UTR
ACTACGTAGCTTCTCTCTAT+TGG 0.314267 1_2:-24668515 None:intergenic
AACTCTGCTGGTGCTGGTGC+TGG 0.332699 1_2:-24665736 None:intergenic
GCTCACAGTATTGCACATTT+GGG 0.341446 1_2:-24667255 None:intergenic
AATTCCAACTATAGTTAATC+CGG 0.348241 1_2:-24669351 None:intergenic
AATTCCAACTATAGTTAATC+CGG 0.348241 1_2:-24669406 None:intergenic
ATTTAGATCTCTTCCATCAT+AGG 0.352718 1_2:+24668720 Msa0063900:CDS
AGCAAATAGCTCAACACATC+GGG 0.358566 1_2:-24669137 None:intergenic
ACAACAAAATTATTGAATAC+TGG 0.361221 1_2:-24667292 None:intergenic
TTATTACAGGAGTATATTCC+TGG 0.367870 1_2:+24669103 Msa0063900:CDS
ATCAAAATTTAAGCCTTTGA+AGG 0.371609 1_2:+24668909 Msa0063900:CDS
CTGAATCTTTAGGTAGAGAT+TGG 0.371710 1_2:+24669455 Msa0063900:three_prime_UTR
GGTATTCAACCTTGCCCAAT+AGG 0.371952 1_2:+24668425 Msa0063900:intron
TTGTGGTTTCAACCTTATAA+TGG 0.379434 1_2:+24667923 Msa0063900:CDS
CTTCCCGGATTAACTATAGT+TGG 0.380805 1_2:+24669347 Msa0063900:three_prime_UTR
CTTCCCGGATTAACTATAGT+TGG 0.380805 1_2:+24669402 Msa0063900:three_prime_UTR
TCATTTATGGAAGTCAGATC+TGG 0.383012 1_2:+24667500 Msa0063900:intron
AAGGCGGATCCACCATTATA+AGG 0.384797 1_2:-24667935 None:intergenic
TCAAGAAAACCTCCAATTGC+AGG 0.388778 1_2:+24668967 Msa0063900:CDS
AAGTGATGCCCTGCTTCTAC+TGG 0.394166 1_2:+24669622 Msa0063900:three_prime_UTR
GGTGTGGTCAGATTTATTAC+AGG 0.398429 1_2:+24669090 Msa0063900:intron
CTGTGTTTGAATTAGAGAAT+TGG 0.402019 1_2:-24665836 None:intergenic
TTATGGCTGGATGTGTTGCT+TGG 0.404184 1_2:+24669167 Msa0063900:CDS
CCCAAAATTAGGCTTTCATA+TGG 0.405670 1_2:-24668743 None:intergenic
AAGGTGCCCTTGTAGCATTA+TGG 0.408636 1_2:+24668488 Msa0063900:CDS
TATGGCTGGATGTGTTGCTT+GGG 0.412627 1_2:+24669168 Msa0063900:CDS
CATGTGATTATGAGCATTCC+TGG 0.421682 1_2:+24668937 Msa0063900:CDS
GTCGGTCCATCTGAATCTTT+AGG 0.423716 1_2:+24669445 Msa0063900:three_prime_UTR
AGGTGCCCTTGTAGCATTAT+GGG 0.424361 1_2:+24668489 Msa0063900:CDS
CAGATTCGCAATCTCATTCC+CGG 0.441058 1_2:+24667525 Msa0063900:CDS
GGCTTTCATATGGCCTATGA+TGG 0.441407 1_2:-24668733 None:intergenic
CTATTGCAGGTGAAAGCAAA+TGG 0.445321 1_2:+24668683 Msa0063900:intron
AATTGCACTTCAACGCCATC+AGG 0.459373 1_2:+24666049 Msa0063900:CDS
CTATCGTTATTCCACAAATC+AGG 0.459548 1_2:+24665807 Msa0063900:CDS
TAATGCTACAAGGGCACCTT+CGG 0.461852 1_2:-24668485 None:intergenic
CAGACAACAATACCTGCAAT+TGG 0.468245 1_2:-24668979 None:intergenic
TATAATGGTGGATCCGCCTT+GGG 0.469513 1_2:+24667938 Msa0063900:CDS
TAAACTCTCCCAGTAGAAGC+AGG 0.470930 1_2:-24669631 None:intergenic
ATTGGTATATACCTGATTTG+TGG 0.470959 1_2:-24665818 None:intergenic
GAGATCTAAATCACCAATCA+AGG 0.471124 1_2:-24668708 None:intergenic
GCTCACAACTCTGCTGGTGC+TGG 0.472627 1_2:-24665742 None:intergenic
AGAAACAGTGAAGCGGTTGT+AGG 0.473527 1_2:-24665892 None:intergenic
TTTGAAGAAACGAGGATAGT+AGG 0.474415 1_2:-24665922 None:intergenic
TTGCGTTTAGTGGGAGAAGA+AGG 0.481280 1_2:-24665969 None:intergenic
TCCACTGCTCACAACTCTGC+TGG 0.484140 1_2:-24665748 None:intergenic
AATATCTAGAATCTTGAAAG+TGG 0.484530 1_2:-24669204 None:intergenic
CATTTATGGAAGTCAGATCT+GGG 0.495680 1_2:+24667501 Msa0063900:intron
AAACGAGGATAGTAGGTGGA+TGG 0.496986 1_2:-24665915 None:intergenic
CTAGTGCTCATCAGAAATCA+AGG 0.499224 1_2:+24667967 Msa0063900:CDS
ATTTAGCGTAACAACAAGAT+CGG 0.503776 1_2:-24666512 None:intergenic
TTATAATGGTGGATCCGCCT+TGG 0.504708 1_2:+24667937 Msa0063900:CDS
AGGTAACAACAACTAACAAA+TGG 0.504816 1_2:+24665770 Msa0063900:exon
TTTGCTAGAGAAATTATGGC+TGG 0.505964 1_2:+24669154 Msa0063900:CDS
ACGTATCCGTGACACTGATA+AGG 0.508783 1_2:+24666537 Msa0063900:CDS
ATAAGGCATAAACTATCATC+AGG 0.510527 1_2:-24669272 None:intergenic
AAAGCAAATGGGTCCTTGAT+TGG 0.513655 1_2:+24668695 Msa0063900:CDS
GAGTAAGTTGCTTAATAGGA+AGG 0.517447 1_2:-24668459 None:intergenic
CCGTGACACTGATAAGGACT+TGG 0.518122 1_2:+24666543 Msa0063900:CDS
AAAATTCAGAGATGACCATA+AGG 0.520180 1_2:-24669289 None:intergenic
TGTGTTTAGTGTAGGAATTG+AGG 0.526558 1_2:+24666338 Msa0063900:intron
AGCAGAGTTGTGAGCAGTGG+AGG 0.527478 1_2:+24665750 Msa0063900:five_prime_UTR
TTTAGCGTAACAACAAGATC+GGG 0.528985 1_2:-24666511 None:intergenic
TATTACAGGAGTATATTCCT+GGG 0.534239 1_2:+24669104 Msa0063900:CDS
ATGTGATTATGAGCATTCCT+GGG 0.539415 1_2:+24668938 Msa0063900:CDS
CTTCTCCCACTAAACGCAAA+CGG 0.540533 1_2:+24665973 Msa0063900:CDS
TATGCAGCTCACACTGATTG+TGG 0.541945 1_2:+24667906 Msa0063900:intron
TGGTTTCAACCTTATAATGG+TGG 0.547761 1_2:+24667926 Msa0063900:CDS
TTACAAGGCCTAACCTTCCC+AGG 0.551312 1_2:-24668773 None:intergenic
GAACGATTTAGAATGCGTAC+TGG 0.556686 1_2:-24665870 None:intergenic
TATTGCAGGTGAAAGCAAAT+GGG 0.556753 1_2:+24668684 Msa0063900:intron
ATTTGTTCTCTATCATTCAA+CGG 0.558103 1_2:-24666029 None:intergenic
ACCAGCAGAGTTGTGAGCAG+TGG 0.564638 1_2:+24665747 Msa0063900:five_prime_UTR
CATCGGGGAGGCTTGACCCC+AGG 0.572898 1_2:-24669121 None:intergenic
ATTCCAACTATAGTTAATCC+GGG 0.573072 1_2:-24669350 None:intergenic
ATTCCAACTATAGTTAATCC+GGG 0.573072 1_2:-24669405 None:intergenic
TGGTTACCCATAATGCTACA+AGG 0.574789 1_2:-24668495 None:intergenic
TGGCTGGATGTGTTGCTTGG+GGG 0.577972 1_2:+24669170 Msa0063900:CDS
ACAACAATACCTGCAATTGG+AGG 0.578994 1_2:-24668976 None:intergenic
TAGCAAATAGCTCAACACAT+CGG 0.581809 1_2:-24669138 None:intergenic
AAGGTCTGGGGTTCGAACCT+CGG 0.583638 1_2:-24669762 None:intergenic
AGTGATGCCCTGCTTCTACT+GGG 0.585834 1_2:+24669623 Msa0063900:three_prime_UTR
ATGGCTGGATGTGTTGCTTG+GGG 0.587655 1_2:+24669169 Msa0063900:CDS
CAACTATAGTTAATCCGGGA+AGG 0.588536 1_2:-24669346 None:intergenic
CAACTATAGTTAATCCGGGA+AGG 0.588536 1_2:-24669401 None:intergenic
GGCATCCTGGAAAACTGCGT+TGG 0.594288 1_2:+24669701 Msa0063900:three_prime_UTR
CTCACAGTATTGCACATTTG+GGG 0.595476 1_2:-24667254 None:intergenic
ATCACATGATCATCCTTCAA+AGG 0.596842 1_2:-24668922 None:intergenic
AGTAAGTTGCTTAATAGGAA+GGG 0.601313 1_2:-24668458 None:intergenic
TTTGGGATACAGTCCTGGGA+AGG 0.602187 1_2:+24668760 Msa0063900:CDS
ATGTAAAAGCAGCTCTCTCG+AGG 0.609778 1_2:-24667370 None:intergenic
CCAAGTCCTTATCAGTGTCA+CGG 0.613168 1_2:-24666543 None:intergenic
TCTCTACCTAAAGATTCAGA+TGG 0.613786 1_2:-24669451 None:intergenic
ATGTGCAATACTGTGAGCAA+AGG 0.621542 1_2:+24667260 Msa0063900:CDS
AGTGGGAGAAGAAGGAACGG+TGG 0.622455 1_2:-24665961 None:intergenic
GACACTGATAAGGACTTGGA+AGG 0.629938 1_2:+24666547 Msa0063900:CDS
TTGAAAGAGAAGTGTGAGGG+TGG 0.631283 1_2:+24666454 Msa0063900:CDS
TGGTGCAAATGAGTTTATGT+TGG 0.633945 1_2:-24665716 None:intergenic
TGCTTGAAAGAGAAGTGTGA+GGG 0.641507 1_2:+24666451 Msa0063900:CDS
ATTACAGGAGTATATTCCTG+GGG 0.642911 1_2:+24669105 Msa0063900:CDS
GGTTACCCATAATGCTACAA+GGG 0.647091 1_2:-24668494 None:intergenic
AAACTCTCCCAGTAGAAGCA+GGG 0.647276 1_2:-24669630 None:intergenic
TCATGTGCTTTCATCAACAA+AGG 0.649039 1_2:-24666361 None:intergenic
CTAGAATCTTGAAAGTGGAG+TGG 0.653474 1_2:-24669199 None:intergenic
TGTGATTATGAGCATTCCTG+GGG 0.653506 1_2:+24668939 Msa0063900:CDS
GTTAGGGATTTGAAGAAACG+AGG 0.658771 1_2:-24665930 None:intergenic
AAGCAACTTACTCACACCGA+AGG 0.671839 1_2:+24668469 Msa0063900:CDS
GAAGAAACGAGGATAGTAGG+TGG 0.675429 1_2:-24665919 None:intergenic
TTTAGTGGGAGAAGAAGGAA+CGG 0.689478 1_2:-24665964 None:intergenic
TTGCTTGAAAGAGAAGTGTG+AGG 0.696581 1_2:+24666450 Msa0063900:CDS
TGGATGGAGAAACAGTGAAG+CGG 0.708388 1_2:-24665899 None:intergenic
GCAAATAGCTCAACACATCG+GGG 0.710022 1_2:-24669136 None:intergenic
AATAGCTCAACACATCGGGG+AGG 0.733241 1_2:-24669133 None:intergenic
TGACACTGAAGATGACGCGG+TGG 0.770612 1_2:+24667318 Msa0063900:CDS
TAATGACACTGAAGATGACG+CGG 0.782238 1_2:+24667315 Msa0063900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATATTTTATTTTCATTTA+TGG + chr1_2:24667487-24667506 Msa0063900:intron 10.0%
!!! TTATTTTCAATTTTCAATTA+GGG + chr1_2:24669680-24669699 Msa0063900:three_prime_UTR 10.0%
!! AAAAAAAAAAAAAAACCTGA+TGG - chr1_2:24666067-24666086 None:intergenic 15.0%
!!! ATTATTTTTTAGGATTTGAT+TGG + chr1_2:24666628-24666647 Msa0063900:intron 15.0%
!! ATTGTTAAAACATGATAAAA+TGG - chr1_2:24666980-24666999 None:intergenic 15.0%
!! ATTTAGAAACTAAATCTATT+TGG - chr1_2:24667136-24667155 None:intergenic 15.0%
!!! TTTGAAATAAATCTAAGATA+TGG + chr1_2:24668379-24668398 Msa0063900:intron 15.0%
!!! TTTTTTTTTATTTCTTTCTG+TGG + chr1_2:24669574-24669593 Msa0063900:three_prime_UTR 15.0%
!!! TTTTTTTTATTTCTTTCTGT+GGG + chr1_2:24669575-24669594 Msa0063900:three_prime_UTR 15.0%
!!! CTTATTTTCAATTTTCAATT+AGG + chr1_2:24669679-24669698 Msa0063900:three_prime_UTR 15.0%
!! ATCAATAATAAGATCATTCT+GGG - chr1_2:24666590-24666609 None:intergenic 20.0%
!! TTGATTGGATATTTAATCAT+AGG + chr1_2:24666643-24666662 Msa0063900:intron 20.0%
!! TTTAAGAATTGTGTTCTATT+CGG - chr1_2:24666683-24666702 None:intergenic 20.0%
!! AATATCATGATGTAAAGAAT+TGG + chr1_2:24666820-24666839 Msa0063900:intron 20.0%
!!! TCTTGAGATTATTTTCAAAT+TGG + chr1_2:24666887-24666906 Msa0063900:intron 20.0%
!!! TTTGATGGAATATATTTTAG+TGG + chr1_2:24666946-24666965 Msa0063900:intron 20.0%
!!! TTGATGGAATATATTTTAGT+GGG + chr1_2:24666947-24666966 Msa0063900:intron 20.0%
!! ACAACAAAATTATTGAATAC+TGG - chr1_2:24667295-24667314 None:intergenic 20.0%
!!! AACTTTTAAGGAGAATTATT+CGG - chr1_2:24667733-24667752 None:intergenic 20.0%
!! AATCAAATAATGTTGATATG+TGG + chr1_2:24667792-24667811 Msa0063900:intron 20.0%
!!! AAATTGTTTTATACTACATC+AGG - chr1_2:24668020-24668039 None:intergenic 20.0%
!! TGATGTAGTATAAAACAATT+TGG + chr1_2:24668019-24668038 Msa0063900:intron 20.0%
!!! TTTGTATTTTCACTCTTTTT+TGG + chr1_2:24668190-24668209 Msa0063900:intron 20.0%
!!! TTGTATTTTCACTCTTTTTT+GGG + chr1_2:24668191-24668210 Msa0063900:intron 20.0%
!!! TAGATATTTTGTCAAAAAGA+TGG + chr1_2:24669219-24669238 Msa0063900:CDS 20.0%
!!! TGTTTCTATGTCTTATTTTT+TGG + chr1_2:24669732-24669751 Msa0063900:three_prime_UTR 20.0%
!!! GTTTCTATGTCTTATTTTTT+GGG + chr1_2:24669733-24669752 Msa0063900:three_prime_UTR 20.0%
! ATTTGTTCTCTATCATTCAA+CGG - chr1_2:24666032-24666051 None:intergenic 25.0%
! ATACAACAGAGTAAAATGTT+AGG - chr1_2:24666121-24666140 None:intergenic 25.0%
! ACTATTATTGTGTTTAGTGT+AGG + chr1_2:24666330-24666349 Msa0063900:intron 25.0%
!! TTGAAATCGAATGAACTTTT+GGG + chr1_2:24666391-24666410 Msa0063900:CDS 25.0%
! CATCAATAATAAGATCATTC+TGG - chr1_2:24666591-24666610 None:intergenic 25.0%
! GATATTTAATCATAGGTGAA+TGG + chr1_2:24666650-24666669 Msa0063900:intron 25.0%
! CATGATATTACTGCTTAAAA+AGG - chr1_2:24666809-24666828 None:intergenic 25.0%
!!! TGATGGAATATATTTTAGTG+GGG + chr1_2:24666948-24666967 Msa0063900:intron 25.0%
! AACACAGACAAATATCTAAA+CGG - chr1_2:24667109-24667128 None:intergenic 25.0%
! CTAAATTGTTAATACATTGC+TGG + chr1_2:24667150-24667169 Msa0063900:intron 25.0%
! AAAACAACCATGATAAATTC+TGG + chr1_2:24667401-24667420 Msa0063900:intron 25.0%
! AAACAACCATGATAAATTCT+GGG + chr1_2:24667402-24667421 Msa0063900:intron 25.0%
!! TGTTGTTTATTAAGCTATCA+TGG + chr1_2:24667453-24667472 Msa0063900:intron 25.0%
! AATCACCTTCATAAAAGAAT+TGG + chr1_2:24667657-24667676 Msa0063900:intron 25.0%
! CTCTTTAATCAGACAATATA+TGG - chr1_2:24668049-24668068 None:intergenic 25.0%
! AATAAAGATATAAGAGATGC+AGG - chr1_2:24668114-24668133 None:intergenic 25.0%
!!! TGTATTTTCACTCTTTTTTG+GGG + chr1_2:24668192-24668211 Msa0063900:intron 25.0%
! GTATTCAATGATACTGTAAA+TGG + chr1_2:24668284-24668303 Msa0063900:intron 25.0%
!! AAATCTAAGATATGGTGTAT+TGG + chr1_2:24668387-24668406 Msa0063900:intron 25.0%
!! CCTTGTAATGTTTTACTAAT+CGG + chr1_2:24668788-24668807 Msa0063900:intron 25.0%
!!! TCAAAGGCTTAAATTTTGAT+TGG - chr1_2:24668909-24668928 None:intergenic 25.0%
! ATCAAAATTTAAGCCTTTGA+AGG + chr1_2:24668909-24668928 Msa0063900:CDS 25.0%
! ACTAGTTATAATGAAGTAGT+CGG + chr1_2:24669035-24669054 Msa0063900:intron 25.0%
!! AATATCTAGAATCTTGAAAG+TGG - chr1_2:24669207-24669226 None:intergenic 25.0%
!!! TTTAACTTTTTTTTCCTTCC+CGG + chr1_2:24669332-24669351 Msa0063900:three_prime_UTR 25.0%
! AATTCCAACTATAGTTAATC+CGG - chr1_2:24669354-24669373 None:intergenic 25.0%
!! ACTATAGTTGGAATTTTGAA+TGG + chr1_2:24669359-24669378 Msa0063900:three_prime_UTR 25.0%
! AATTCCAACTATAGTTAATC+CGG - chr1_2:24669354-24669373 None:intergenic 25.0%
!! ACTATAGTTGGAATTTTGAA+TGG + chr1_2:24669359-24669378 Msa0063900:three_prime_UTR 25.0%
! ATTTGTCAAACTAGCAATTT+GGG - chr1_2:24669485-24669504 None:intergenic 25.0%
! AATTTGTCAAACTAGCAATT+TGG - chr1_2:24669486-24669505 None:intergenic 25.0%
!! AATTGCTAGTTTGACAAATT+AGG + chr1_2:24669486-24669505 Msa0063900:three_prime_UTR 25.0%
AGGTAACAACAACTAACAAA+TGG + chr1_2:24665770-24665789 Msa0063900:exon 30.0%
! ATTGGTATATACCTGATTTG+TGG - chr1_2:24665821-24665840 None:intergenic 30.0%
CTGTGTTTGAATTAGAGAAT+TGG - chr1_2:24665839-24665858 None:intergenic 30.0%
! GTTGAAATCGAATGAACTTT+TGG + chr1_2:24666390-24666409 Msa0063900:CDS 30.0%
ATTTAGCGTAACAACAAGAT+CGG - chr1_2:24666515-24666534 None:intergenic 30.0%
ATCATGATGTAAAGAATTGG+AGG + chr1_2:24666823-24666842 Msa0063900:intron 30.0%
ATGAGTAATTGATCATGCAT+TGG + chr1_2:24666917-24666936 Msa0063900:intron 30.0%
TTTATCATCTATATGAACGC+AGG + chr1_2:24667051-24667070 Msa0063900:intron 30.0%
AGTTATGTATGAACCATTAC+CGG - chr1_2:24667547-24667566 None:intergenic 30.0%
! TTATTTCTTGTTATATGCCG+TGG + chr1_2:24667573-24667592 Msa0063900:intron 30.0%
TTGTGGTTTCAACCTTATAA+TGG + chr1_2:24667923-24667942 Msa0063900:CDS 30.0%
GACGAATAAGATTTGTACTA+TGG + chr1_2:24667991-24668010 Msa0063900:intron 30.0%
!!! GTATTTTCACTCTTTTTTGG+GGG + chr1_2:24668193-24668212 Msa0063900:intron 30.0%
!!! TATTTTCACTCTTTTTTGGG+GGG + chr1_2:24668194-24668213 Msa0063900:intron 30.0%
TTACTCAGTTTAAACTGGTT+GGG + chr1_2:24668344-24668363 Msa0063900:intron 30.0%
!! AGGGATAAAAAGTACCTATT+GGG - chr1_2:24668442-24668461 None:intergenic 30.0%
!! AAGGGATAAAAAGTACCTAT+TGG - chr1_2:24668443-24668462 None:intergenic 30.0%
AGTAAGTTGCTTAATAGGAA+GGG - chr1_2:24668461-24668480 None:intergenic 30.0%
AATGACATCAAACACTTGTA+TGG - chr1_2:24668635-24668654 None:intergenic 30.0%
ATTTAGATCTCTTCCATCAT+AGG + chr1_2:24668720-24668739 Msa0063900:CDS 30.0%
! CCATATGAAAGCCTAATTTT+GGG + chr1_2:24668743-24668762 Msa0063900:CDS 30.0%
CCGATTAGTAAAACATTACA+AGG - chr1_2:24668791-24668810 None:intergenic 30.0%
TTTCTTATATCTCTCACTTG+TGG + chr1_2:24668849-24668868 Msa0063900:intron 30.0%
! TTATTACAGGAGTATATTCC+TGG + chr1_2:24669103-24669122 Msa0063900:CDS 30.0%
! TATTACAGGAGTATATTCCT+GGG + chr1_2:24669104-24669123 Msa0063900:CDS 30.0%
! GCTATTTGCTAGAGAAATTA+TGG + chr1_2:24669150-24669169 Msa0063900:CDS 30.0%
! GGCTAGCTAATTCTTTAAAA+AGG + chr1_2:24669240-24669259 Msa0063900:exon 30.0%
ATAAGGCATAAACTATCATC+AGG - chr1_2:24669275-24669294 None:intergenic 30.0%
TGATGATAGTTTATGCCTTA+TGG + chr1_2:24669274-24669293 Msa0063900:three_prime_UTR 30.0%
AAAATTCAGAGATGACCATA+AGG - chr1_2:24669292-24669311 None:intergenic 30.0%
ATTCCAACTATAGTTAATCC+GGG - chr1_2:24669353-24669372 None:intergenic 30.0%
ATTCCAACTATAGTTAATCC+GGG - chr1_2:24669353-24669372 None:intergenic 30.0%
!!! TCTATGTCTTATTTTTTGGG+TGG + chr1_2:24669736-24669755 Msa0063900:three_prime_UTR 30.0%
TGGTGCAAATGAGTTTATGT+TGG - chr1_2:24665719-24665738 None:intergenic 35.0%
CTATCGTTATTCCACAAATC+AGG + chr1_2:24665807-24665826 Msa0063900:CDS 35.0%
TTTGAAGAAACGAGGATAGT+AGG - chr1_2:24665925-24665944 None:intergenic 35.0%
! TTTTTCCGTTTGCGTTTAGT+GGG - chr1_2:24665981-24666000 None:intergenic 35.0%
!!! TTTTTTCCGTTTGCGTTTAG+TGG - chr1_2:24665982-24666001 None:intergenic 35.0%
TAATGGTATTGTGTCTGTGT+CGG - chr1_2:24666160-24666179 None:intergenic 35.0%
TGTGTTTAGTGTAGGAATTG+AGG + chr1_2:24666338-24666357 Msa0063900:intron 35.0%
TCATGTGCTTTCATCAACAA+AGG - chr1_2:24666364-24666383 None:intergenic 35.0%
!! TGAACACTGTTTTGTTGAAC+TGG + chr1_2:24666477-24666496 Msa0063900:CDS 35.0%
!! GAACACTGTTTTGTTGAACT+GGG + chr1_2:24666478-24666497 Msa0063900:CDS 35.0%
TTTAGCGTAACAACAAGATC+GGG - chr1_2:24666514-24666533 None:intergenic 35.0%
! ATGCATTGGATGCTATTTGA+TGG + chr1_2:24666931-24666950 Msa0063900:intron 35.0%
ACACATCCCAGAATTTATCA+TGG - chr1_2:24667411-24667430 None:intergenic 35.0%
TCATTTATGGAAGTCAGATC+TGG + chr1_2:24667500-24667519 Msa0063900:intron 35.0%
CATTTATGGAAGTCAGATCT+GGG + chr1_2:24667501-24667520 Msa0063900:intron 35.0%
GTTATGTATGAACCATTACC+GGG - chr1_2:24667546-24667565 None:intergenic 35.0%
ACAGATATGATGAAGAACCA+CGG - chr1_2:24667593-24667612 None:intergenic 35.0%
! GGATGCCAATTCTTTTATGA+AGG - chr1_2:24667665-24667684 None:intergenic 35.0%
! CACATGTCATGCAACTTTTA+AGG - chr1_2:24667745-24667764 None:intergenic 35.0%
AAGTTGCATGACATGTGAAT+TGG + chr1_2:24667748-24667767 Msa0063900:intron 35.0%
AGTTGCATGACATGTGAATT+GGG + chr1_2:24667749-24667768 Msa0063900:intron 35.0%
! AGAACTTGTTTGTGTTTAGC+TGG + chr1_2:24667832-24667851 Msa0063900:intron 35.0%
TGGTTTCAACCTTATAATGG+TGG + chr1_2:24667926-24667945 Msa0063900:CDS 35.0%
TCAATAAGTTTGCGAGAGAA+AGG - chr1_2:24668148-24668167 None:intergenic 35.0%
GCTCATAGCATGAAAATGAA+CGG + chr1_2:24668227-24668246 Msa0063900:intron 35.0%
AGCTGTTACTCAGTTTAAAC+TGG + chr1_2:24668339-24668358 Msa0063900:intron 35.0%
GTTACTCAGTTTAAACTGGT+TGG + chr1_2:24668343-24668362 Msa0063900:intron 35.0%
AGTTTAAACTGGTTGGGAAA+TGG + chr1_2:24668350-24668369 Msa0063900:intron 35.0%
GTTTAAACTGGTTGGGAAAT+GGG + chr1_2:24668351-24668370 Msa0063900:intron 35.0%
TTTAAACTGGTTGGGAAATG+GGG + chr1_2:24668352-24668371 Msa0063900:intron 35.0%
TATTGGTGTGTCATCTATGT+AGG + chr1_2:24668404-24668423 Msa0063900:intron 35.0%
!! TAAAAAGTACCTATTGGGCA+AGG - chr1_2:24668437-24668456 None:intergenic 35.0%
GAGTAAGTTGCTTAATAGGA+AGG - chr1_2:24668462-24668481 None:intergenic 35.0%
GTGTGAGTAAGTTGCTTAAT+AGG - chr1_2:24668466-24668485 None:intergenic 35.0%
!! TGCAAGTTTTCATTGGTTGA+AGG + chr1_2:24668582-24668601 Msa0063900:CDS 35.0%
!! AAGTTTTCATTGGTTGAAGG+TGG + chr1_2:24668585-24668604 Msa0063900:intron 35.0%
CACTTGTATGGAAAGCAAAT+GGG - chr1_2:24668623-24668642 None:intergenic 35.0%
ACACTTGTATGGAAAGCAAA+TGG - chr1_2:24668624-24668643 None:intergenic 35.0%
AGACAACAAGTACAAGAGAT+TGG - chr1_2:24668665-24668684 None:intergenic 35.0%
!! TTGTACTTGTTGTCTATTGC+AGG + chr1_2:24668670-24668689 Msa0063900:intron 35.0%
TATTGCAGGTGAAAGCAAAT+GGG + chr1_2:24668684-24668703 Msa0063900:intron 35.0%
GAGATCTAAATCACCAATCA+AGG - chr1_2:24668711-24668730 None:intergenic 35.0%
! GCCATATGAAAGCCTAATTT+TGG + chr1_2:24668742-24668761 Msa0063900:CDS 35.0%
CCCAAAATTAGGCTTTCATA+TGG - chr1_2:24668746-24668765 None:intergenic 35.0%
!!! TAATTTTGGGATACAGTCCT+GGG + chr1_2:24668756-24668775 Msa0063900:CDS 35.0%
! TGTGGTGTATGGTATTTTCT+AGG + chr1_2:24668867-24668886 Msa0063900:intron 35.0%
ATCACATGATCATCCTTCAA+AGG - chr1_2:24668925-24668944 None:intergenic 35.0%
ATGTGATTATGAGCATTCCT+GGG + chr1_2:24668938-24668957 Msa0063900:CDS 35.0%
! ATTACAGGAGTATATTCCTG+GGG + chr1_2:24669105-24669124 Msa0063900:CDS 35.0%
TAGCAAATAGCTCAACACAT+CGG - chr1_2:24669141-24669160 None:intergenic 35.0%
TTTGCTAGAGAAATTATGGC+TGG + chr1_2:24669154-24669173 Msa0063900:CDS 35.0%
! TTTTGAATGGTTAGTGCAGT+TGG + chr1_2:24669372-24669391 Msa0063900:three_prime_UTR 35.0%
! TTTTGAATGGTTAGTGCAGT+CGG + chr1_2:24669372-24669391 Msa0063900:three_prime_UTR 35.0%
TCTCTACCTAAAGATTCAGA+TGG - chr1_2:24669454-24669473 None:intergenic 35.0%
CTGAATCTTTAGGTAGAGAT+TGG + chr1_2:24669455-24669474 Msa0063900:three_prime_UTR 35.0%
!! AATTTTCAATTAGGGCATCC+TGG + chr1_2:24669688-24669707 Msa0063900:three_prime_UTR 35.0%
! GAACGATTTAGAATGCGTAC+TGG - chr1_2:24665873-24665892 None:intergenic 40.0%
GTTAGGGATTTGAAGAAACG+AGG - chr1_2:24665933-24665952 None:intergenic 40.0%
TTTAGTGGGAGAAGAAGGAA+CGG - chr1_2:24665967-24665986 None:intergenic 40.0%
GCAAACGGAAAAAACGAAAG+CGG + chr1_2:24665988-24666007 Msa0063900:CDS 40.0%
GAAAAAACGAAAGCGGAGTT+CGG + chr1_2:24665995-24666014 Msa0063900:CDS 40.0%
! TTGCTTGAAAGAGAAGTGTG+AGG + chr1_2:24666450-24666469 Msa0063900:CDS 40.0%
! TGCTTGAAAGAGAAGTGTGA+GGG + chr1_2:24666451-24666470 Msa0063900:CDS 40.0%
AGGCTAAGACTTGCAATCAA+GGG + chr1_2:24667071-24667090 Msa0063900:intron 40.0%
CTTAGATTGTGTGTAGTTGC+TGG + chr1_2:24667184-24667203 Msa0063900:intron 40.0%
CTCACAGTATTGCACATTTG+GGG - chr1_2:24667257-24667276 None:intergenic 40.0%
GCTCACAGTATTGCACATTT+GGG - chr1_2:24667258-24667277 None:intergenic 40.0%
TGCTCACAGTATTGCACATT+TGG - chr1_2:24667259-24667278 None:intergenic 40.0%
ATGTGCAATACTGTGAGCAA+AGG + chr1_2:24667260-24667279 Msa0063900:CDS 40.0%
TAATGACACTGAAGATGACG+CGG + chr1_2:24667315-24667334 Msa0063900:CDS 40.0%
GTGGTTCTTCATCATATCTG+TGG + chr1_2:24667592-24667611 Msa0063900:intron 40.0%
GTTGCATGACATGTGAATTG+GGG + chr1_2:24667750-24667769 Msa0063900:intron 40.0%
ATTGGGGTTGTCTTGAATGT+TGG + chr1_2:24667766-24667785 Msa0063900:intron 40.0%
TGTGTTTAGCTGGTCAAGTA+TGG + chr1_2:24667842-24667861 Msa0063900:intron 40.0%
GTGTTTAGCTGGTCAAGTAT+GGG + chr1_2:24667843-24667862 Msa0063900:intron 40.0%
TGTTTAGCTGGTCAAGTATG+GGG + chr1_2:24667844-24667863 Msa0063900:intron 40.0%
CTAGTGCTCATCAGAAATCA+AGG + chr1_2:24667967-24667986 Msa0063900:CDS 40.0%
TCTCTCGCAAACTTATTGAG+AGG + chr1_2:24668149-24668168 Msa0063900:intron 40.0%
GGTTACCCATAATGCTACAA+GGG - chr1_2:24668497-24668516 None:intergenic 40.0%
TGGTTACCCATAATGCTACA+AGG - chr1_2:24668498-24668517 None:intergenic 40.0%
ACTACGTAGCTTCTCTCTAT+TGG - chr1_2:24668518-24668537 None:intergenic 40.0%
! GCTATGCTGCAAGTTTTCAT+TGG + chr1_2:24668575-24668594 Msa0063900:CDS 40.0%
CTATTGCAGGTGAAAGCAAA+TGG + chr1_2:24668683-24668702 Msa0063900:intron 40.0%
AAAGCAAATGGGTCCTTGAT+TGG + chr1_2:24668695-24668714 Msa0063900:CDS 40.0%
CAGGACTGTATCCCAAAATT+AGG - chr1_2:24668757-24668776 None:intergenic 40.0%
!!! CTAATTTTGGGATACAGTCC+TGG + chr1_2:24668755-24668774 Msa0063900:CDS 40.0%
GCCTTCTAAGTTCCAACTAT+CGG + chr1_2:24668810-24668829 Msa0063900:intron 40.0%
ACCGATAGTTGGAACTTAGA+AGG - chr1_2:24668814-24668833 None:intergenic 40.0%
GTGAGAGAAAAACCGATAGT+TGG - chr1_2:24668825-24668844 None:intergenic 40.0%
TATCTCTCACTTGTGGTGTA+TGG + chr1_2:24668856-24668875 Msa0063900:intron 40.0%
CATGTGATTATGAGCATTCC+TGG + chr1_2:24668937-24668956 Msa0063900:CDS 40.0%
TGTGATTATGAGCATTCCTG+GGG + chr1_2:24668939-24668958 Msa0063900:CDS 40.0%
TCAAGAAAACCTCCAATTGC+AGG + chr1_2:24668967-24668986 Msa0063900:CDS 40.0%
ACAACAATACCTGCAATTGG+AGG - chr1_2:24668979-24668998 None:intergenic 40.0%
CAGACAACAATACCTGCAAT+TGG - chr1_2:24668982-24669001 None:intergenic 40.0%
! CAATTGCAGGTATTGTTGTC+TGG + chr1_2:24668980-24668999 Msa0063900:intron 40.0%
GGTGTGGTCAGATTTATTAC+AGG + chr1_2:24669090-24669109 Msa0063900:intron 40.0%
AGCAAATAGCTCAACACATC+GGG - chr1_2:24669140-24669159 None:intergenic 40.0%
CTAGAATCTTGAAAGTGGAG+TGG - chr1_2:24669202-24669221 None:intergenic 40.0%
CAACTATAGTTAATCCGGGA+AGG - chr1_2:24669349-24669368 None:intergenic 40.0%
CTTCCCGGATTAACTATAGT+TGG + chr1_2:24669347-24669366 Msa0063900:three_prime_UTR 40.0%
CAACTATAGTTAATCCGGGA+AGG - chr1_2:24669349-24669368 None:intergenic 40.0%
CTTCCCGGATTAACTATAGT+TGG + chr1_2:24669347-24669366 Msa0063900:three_prime_UTR 40.0%
AGAAACAGTGAAGCGGTTGT+AGG - chr1_2:24665895-24665914 None:intergenic 45.0%
TGGATGGAGAAACAGTGAAG+CGG - chr1_2:24665902-24665921 None:intergenic 45.0%
AAACGAGGATAGTAGGTGGA+TGG - chr1_2:24665918-24665937 None:intergenic 45.0%
GAAGAAACGAGGATAGTAGG+TGG - chr1_2:24665922-24665941 None:intergenic 45.0%
!! AAGAAGGAACGGTGGTTTTG+GGG - chr1_2:24665956-24665975 None:intergenic 45.0%
! GAAGAAGGAACGGTGGTTTT+GGG - chr1_2:24665957-24665976 None:intergenic 45.0%
! AGAAGAAGGAACGGTGGTTT+TGG - chr1_2:24665958-24665977 None:intergenic 45.0%
TTGCGTTTAGTGGGAGAAGA+AGG - chr1_2:24665972-24665991 None:intergenic 45.0%
CTTCTCCCACTAAACGCAAA+CGG + chr1_2:24665973-24665992 Msa0063900:CDS 45.0%
AATTGCACTTCAACGCCATC+AGG + chr1_2:24666049-24666068 Msa0063900:CDS 45.0%
CACATGTGCAAGTGTCTTGT+AGG + chr1_2:24666238-24666257 Msa0063900:intron 45.0%
! TTGAAAGAGAAGTGTGAGGG+TGG + chr1_2:24666454-24666473 Msa0063900:CDS 45.0%
ACGTATCCGTGACACTGATA+AGG + chr1_2:24666537-24666556 Msa0063900:CDS 45.0%
CCAAGTCCTTATCAGTGTCA+CGG - chr1_2:24666546-24666565 None:intergenic 45.0%
GACACTGATAAGGACTTGGA+AGG + chr1_2:24666547-24666566 Msa0063900:CDS 45.0%
CAGGCTAAGACTTGCAATCA+AGG + chr1_2:24667070-24667089 Msa0063900:intron 45.0%
TTGTGTGTAGTTGCTGGTGT+AGG + chr1_2:24667190-24667209 Msa0063900:intron 45.0%
ATGTAAAAGCAGCTCTCTCG+AGG - chr1_2:24667373-24667392 None:intergenic 45.0%
!!! TCGAGAGAGCTGCTTTTACA+TGG + chr1_2:24667372-24667391 Msa0063900:CDS 45.0%
CAGATTCGCAATCTCATTCC+CGG + chr1_2:24667525-24667544 Msa0063900:CDS 45.0%
! TATGCAGCTCACACTGATTG+TGG + chr1_2:24667906-24667925 Msa0063900:intron 45.0%
AAGGCGGATCCACCATTATA+AGG - chr1_2:24667938-24667957 None:intergenic 45.0%
!! TTATAATGGTGGATCCGCCT+TGG + chr1_2:24667937-24667956 Msa0063900:CDS 45.0%
!! TATAATGGTGGATCCGCCTT+GGG + chr1_2:24667938-24667957 Msa0063900:CDS 45.0%
! TGAGCACTAGCATTTTCCCA+AGG - chr1_2:24667957-24667976 None:intergenic 45.0%
!!! TTTCACTCTTTTTTGGGGGG+TGG + chr1_2:24668197-24668216 Msa0063900:intron 45.0%
GGTATTCAACCTTGCCCAAT+AGG + chr1_2:24668425-24668444 Msa0063900:intron 45.0%
AAGCAACTTACTCACACCGA+AGG + chr1_2:24668469-24668488 Msa0063900:CDS 45.0%
!! TAATGCTACAAGGGCACCTT+CGG - chr1_2:24668488-24668507 None:intergenic 45.0%
! AAGGTGCCCTTGTAGCATTA+TGG + chr1_2:24668488-24668507 Msa0063900:CDS 45.0%
AGGTGCCCTTGTAGCATTAT+GGG + chr1_2:24668489-24668508 Msa0063900:CDS 45.0%
! AGAAAGAGCTTTTTGCAGCG+TGG + chr1_2:24668545-24668564 Msa0063900:CDS 45.0%
! GAAAGAGCTTTTTGCAGCGT+GGG + chr1_2:24668546-24668565 Msa0063900:CDS 45.0%
! AAAGAGCTTTTTGCAGCGTG+GGG + chr1_2:24668547-24668566 Msa0063900:CDS 45.0%
GGCTTTCATATGGCCTATGA+TGG - chr1_2:24668736-24668755 None:intergenic 45.0%
! GGTTTTCTTGAGTAATCCCC+AGG - chr1_2:24668958-24668977 None:intergenic 45.0%
ACGCTGAAGTTTCTTCGTAC+TGG + chr1_2:24669069-24669088 Msa0063900:intron 45.0%
! GAAGTTTCTTCGTACTGGTG+TGG + chr1_2:24669074-24669093 Msa0063900:intron 45.0%
GCAAATAGCTCAACACATCG+GGG - chr1_2:24669139-24669158 None:intergenic 45.0%
! TTATGGCTGGATGTGTTGCT+TGG + chr1_2:24669167-24669186 Msa0063900:CDS 45.0%
!! TATGGCTGGATGTGTTGCTT+GGG + chr1_2:24669168-24669187 Msa0063900:CDS 45.0%
! GCAGTTGGAATTTTCCTTCC+CGG + chr1_2:24669387-24669406 Msa0063900:three_prime_UTR 45.0%
GTCGGTCCATCTGAATCTTT+AGG + chr1_2:24669445-24669464 Msa0063900:three_prime_UTR 45.0%
AAACTCTCCCAGTAGAAGCA+GGG - chr1_2:24669633-24669652 None:intergenic 45.0%
TAAACTCTCCCAGTAGAAGC+AGG - chr1_2:24669634-24669653 None:intergenic 45.0%
! TCATACCAACGCAGTTTTCC+AGG - chr1_2:24669709-24669728 None:intergenic 45.0%
!!! TATTTTTTGGGTGGTGACCG+AGG + chr1_2:24669745-24669764 Msa0063900:three_prime_UTR 45.0%
!!! AATTTAGTATATTATTTTTT+AGG + chr1_2:24666618-24666637 Msa0063900:intron 5.0%
!! AATATTATTAATAAGTAAAA+AGG - chr1_2:24667686-24667705 None:intergenic 5.0%
!!! AACGGTGGTTTTGGGGGTTA+GGG - chr1_2:24665949-24665968 None:intergenic 50.0%
!!! AGAAGGAACGGTGGTTTTGG+GGG - chr1_2:24665955-24665974 None:intergenic 50.0%
!! CCACGTGTCAGCATTGGTAA+TGG - chr1_2:24666177-24666196 None:intergenic 50.0%
CCATTACCAATGCTGACACG+TGG + chr1_2:24666174-24666193 Msa0063900:intron 50.0%
AAGTGTCCACGTGTCAGCAT+TGG - chr1_2:24666183-24666202 None:intergenic 50.0%
CCGTGACACTGATAAGGACT+TGG + chr1_2:24666543-24666562 Msa0063900:CDS 50.0%
CGCAATCTCATTCCCGGTAA+TGG + chr1_2:24667531-24667550 Msa0063900:intron 50.0%
! GCACTAGCATTTTCCCAAGG+CGG - chr1_2:24667954-24667973 None:intergenic 50.0%
!!! ACTCTTTTTTGGGGGGTGGA+GGG + chr1_2:24668201-24668220 Msa0063900:intron 50.0%
! AAGAGCTTTTTGCAGCGTGG+GGG + chr1_2:24668548-24668567 Msa0063900:CDS 50.0%
! TTTGGGATACAGTCCTGGGA+AGG + chr1_2:24668760-24668779 Msa0063900:CDS 50.0%
GATACAGTCCTGGGAAGGTT+AGG + chr1_2:24668765-24668784 Msa0063900:intron 50.0%
TTACAAGGCCTAACCTTCCC+AGG - chr1_2:24668776-24668795 None:intergenic 50.0%
AATAGCTCAACACATCGGGG+AGG - chr1_2:24669136-24669155 None:intergenic 50.0%
!! ATGGCTGGATGTGTTGCTTG+GGG + chr1_2:24669169-24669188 Msa0063900:CDS 50.0%
AAGTGATGCCCTGCTTCTAC+TGG + chr1_2:24669622-24669641 Msa0063900:three_prime_UTR 50.0%
AGTGATGCCCTGCTTCTACT+GGG + chr1_2:24669623-24669642 Msa0063900:three_prime_UTR 50.0%
ACCAGCAGAGTTGTGAGCAG+TGG + chr1_2:24665747-24665766 Msa0063900:five_prime_UTR 55.0%
TCCACTGCTCACAACTCTGC+TGG - chr1_2:24665751-24665770 None:intergenic 55.0%
AGCAGAGTTGTGAGCAGTGG+AGG + chr1_2:24665750-24665769 Msa0063900:five_prime_UTR 55.0%
!!! GAACGGTGGTTTTGGGGGTT+AGG - chr1_2:24665950-24665969 None:intergenic 55.0%
AGTGGGAGAAGAAGGAACGG+TGG - chr1_2:24665964-24665983 None:intergenic 55.0%
TGACACTGAAGATGACGCGG+TGG + chr1_2:24667318-24667337 Msa0063900:CDS 55.0%
!!! CACTCTTTTTTGGGGGGTGG+AGG + chr1_2:24668200-24668219 Msa0063900:intron 55.0%
!!! CTCTTTTTTGGGGGGTGGAG+GGG + chr1_2:24668202-24668221 Msa0063900:intron 55.0%
! AGAGCTTTTTGCAGCGTGGG+GGG + chr1_2:24668549-24668568 Msa0063900:CDS 55.0%
!! TGGCTGGATGTGTTGCTTGG+GGG + chr1_2:24669170-24669189 Msa0063900:CDS 55.0%
GGCATCCTGGAAAACTGCGT+TGG + chr1_2:24669701-24669720 Msa0063900:three_prime_UTR 55.0%
!! AACTCTGCTGGTGCTGGTGC+TGG - chr1_2:24665739-24665758 None:intergenic 60.0%
GCTCACAACTCTGCTGGTGC+TGG - chr1_2:24665745-24665764 None:intergenic 60.0%
CATCGGGGAGGCTTGACCCC+AGG - chr1_2:24669124-24669143 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 24665704 24669774 24665704 ID=Msa0063900;Name=Msa0063900
chr1_2 mRNA 24665704 24669774 24665704 ID=Msa0063900-mRNA-1;Parent=Msa0063900;Name=Msa0063900-mRNA-1;_AED=0.06;_eAED=0.06;_QI=85|1|1|1|1|1|9|525|422
chr1_2 exon 24665704 24666070 24665704 ID=Msa0063900-mRNA-1:exon:8793;Parent=Msa0063900-mRNA-1
chr1_2 exon 24666352 24666568 24666352 ID=Msa0063900-mRNA-1:exon:8794;Parent=Msa0063900-mRNA-1
chr1_2 exon 24667251 24667393 24667251 ID=Msa0063900-mRNA-1:exon:8795;Parent=Msa0063900-mRNA-1
chr1_2 exon 24667513 24667546 24667513 ID=Msa0063900-mRNA-1:exon:8796;Parent=Msa0063900-mRNA-1
chr1_2 exon 24667913 24667988 24667913 ID=Msa0063900-mRNA-1:exon:8797;Parent=Msa0063900-mRNA-1
chr1_2 exon 24668426 24668603 24668426 ID=Msa0063900-mRNA-1:exon:8798;Parent=Msa0063900-mRNA-1
chr1_2 exon 24668692 24668781 24668692 ID=Msa0063900-mRNA-1:exon:8799;Parent=Msa0063900-mRNA-1
chr1_2 exon 24668889 24668988 24668889 ID=Msa0063900-mRNA-1:exon:8800;Parent=Msa0063900-mRNA-1
chr1_2 exon 24669101 24669774 24669101 ID=Msa0063900-mRNA-1:exon:8801;Parent=Msa0063900-mRNA-1
chr1_2 five_prime_UTR 24665704 24665788 24665704 ID=Msa0063900-mRNA-1:five_prime_utr;Parent=Msa0063900-mRNA-1
chr1_2 CDS 24665789 24666070 24665789 ID=Msa0063900-mRNA-1:cds;Parent=Msa0063900-mRNA-1
chr1_2 CDS 24666352 24666568 24666352 ID=Msa0063900-mRNA-1:cds;Parent=Msa0063900-mRNA-1
chr1_2 CDS 24667251 24667393 24667251 ID=Msa0063900-mRNA-1:cds;Parent=Msa0063900-mRNA-1
chr1_2 CDS 24667513 24667546 24667513 ID=Msa0063900-mRNA-1:cds;Parent=Msa0063900-mRNA-1
chr1_2 CDS 24667913 24667988 24667913 ID=Msa0063900-mRNA-1:cds;Parent=Msa0063900-mRNA-1
chr1_2 CDS 24668426 24668603 24668426 ID=Msa0063900-mRNA-1:cds;Parent=Msa0063900-mRNA-1
chr1_2 CDS 24668692 24668781 24668692 ID=Msa0063900-mRNA-1:cds;Parent=Msa0063900-mRNA-1
chr1_2 CDS 24668889 24668988 24668889 ID=Msa0063900-mRNA-1:cds;Parent=Msa0063900-mRNA-1
chr1_2 CDS 24669101 24669249 24669101 ID=Msa0063900-mRNA-1:cds;Parent=Msa0063900-mRNA-1
chr1_2 three_prime_UTR 24669250 24669774 24669250 ID=Msa0063900-mRNA-1:three_prime_utr;Parent=Msa0063900-mRNA-1
Gene Sequence

>Msa0063900

ATGGAAGACTCACAGAAGCTATCGTTATTCCACAAATCAGGTATATACCAATTCTCTAATTCAAACACAGTTTTCATCGATCCAGTACGCATTCTAAATCGTTCCTACAACCGCTTCACTGTTTCTCCATCCACCTACTATCCTCGTTTCTTCAAATCCCTAACCCCCAAAACCACCGTTCCTTCTTCTCCCACTAAACGCAAACGGAAAAAACGAAAGCGGAGTTCGGAAGAATCTCGACCGTTGAATGATAGAGAACAAATTGCACTTCAACGCCATCAGGAATTGAGGCCTTTGTTGATGAAAGCACATGAGTGTTTGTTGAAATCGAATGAACTTTTGGGTGCTCTGAAAGATTTGAGAAGTGAAAGTGATTCTTGTTGCTTGAAAGAGAAGTGTGAGGGTGGTGAACACTGTTTTGTTGAACTGGGACAGCAAGTGCCCGATCTTGTTGTTACGCTAAATTTACGTATCCGTGACACTGATAAGGACTTGGAAGATTCCCCAAATGTGCAATACTGTGAGCAAAGGTCGATACTACCAGTATTCAATAATTTTGTTGTTAATGACACTGAAGATGACGCGGTGGCTGAGATTTTGAACAATCATTATATAATGCCTCGAGAGAGCTGCTTTTACATGTCAGATCTGGGACAGATTCGCAATCTCATTCCCGCTCACACTGATTGTGGTTTCAACCTTATAATGGTGGATCCGCCTTGGGAAAATGCTAGTGCTCATCAGAAATCAAGGTATTCAACCTTGCCCAATAGGTACTTTTTATCCCTTCCTATTAAGCAACTTACTCACACCGAAGGTGCCCTTGTAGCATTATGGGTAACCAATAGAGAGAAGCTACGTAGTTTTGTCGAGAAAGAGCTTTTTGCAGCGTGGGGGGTCAGCTATGCTGCAAGTTTTCATTGGTTGAAGGTGAAAGCAAATGGGTCCTTGATTGGTGATTTAGATCTCTTCCATCATAGGCCATATGAAAGCCTAATTTTGGGATACAGTCCTGGGAAGGTAAAAAATTCTGATAACCAATCAAAATTTAAGCCTTTGAAGGATGATCATGTGATTATGAGCATTCCTGGGGATTACTCAAGAAAACCTCCAATTGCAGATTTATTACAGGAGTATATTCCTGGGGTCAAGCCTCCCCGATGTGTTGAGCTATTTGCTAGAGAAATTATGGCTGGATGTGTTGCTTGGGGGAATGAACCACTCCACTTTCAAGATTCTAGATATTTTGTCAAAAAGATGGCTAGCTAA
Protein sequence

>Msa0063900

MEDSQKLSLFHKSGIYQFSNSNTVFIDPVRILNRSYNRFTVSPSTYYPRFFKSLTPKTTVPSSPTKRKRKKRKRSSEESRPLNDREQIALQRHQELRPLLMKAHECLLKSNELLGALKDLRSESDSCCLKEKCEGGEHCFVELGQQVPDLVVTLNLRIRDTDKDLEDSPNVQYCEQRSILPVFNNFVVNDTEDDAVAEILNNHYIMPRESCFYMSDLGQIRNLIPAHTDCGFNLIMVDPPWENASAHQKSRYSTLPNRYFLSLPIKQLTHTEGALVALWVTNREKLRSFVEKELFAAWGVSYAASFHWLKVKANGSLIGDLDLFHHRPYESLILGYSPGKVKNSDNQSKFKPLKDDHVIMSIPGDYSRKPPIADLLQEYIPGVKPPRCVELFAREIMAGCVAWGNEPLHFQDSRYFVKKMAS*