AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1387880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1387880 MtrunA17_Chr1g0154641 95.735 422 18 0 1 422 17 438 0.0 827
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1387880 AT1G19340.1 54.610 423 177 6 1 418 1 413 1.21e-151 436

Find 125 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCATATGAAAGCCTAATTT+TGG 0.141787 tig0020980:+92388 Msa1387880:CDS
AATTTGTCAAACTAGCAATT+TGG 0.190783 tig0020980:-93129 None:intergenic
AGAAGAAGGAACGGTGGTTT+TGG 0.197534 tig0020980:-89602 None:intergenic
GGCTAGCTAATTCTTTAAAA+AGG 0.240823 tig0020980:+92886 Msa1387880:exon
GCTATTTGCTAGAGAAATTA+TGG 0.243019 tig0020980:+92796 Msa1387880:CDS
GTGTGAGTAAGTTGCTTAAT+AGG 0.264589 tig0020980:-92109 None:intergenic
AATTGCTAGTTTGACAAATT+AGG 0.270371 tig0020980:+93132 Msa1387880:three_prime_UTR
TGCTCACAGTATTGCACATT+TGG 0.276460 tig0020980:-90902 None:intergenic
CAGGACTGTATCCCAAAATT+AGG 0.282275 tig0020980:-92400 None:intergenic
GTTGAAATCGAATGAACTTT+TGG 0.299746 tig0020980:+90038 Msa1387880:CDS
ATTTGTCAAACTAGCAATTT+GGG 0.307169 tig0020980:-93128 None:intergenic
TGATGATAGTTTATGCCTTA+TGG 0.308292 tig0020980:+92920 Msa1387880:three_prime_UTR
ACTACGTAGCTTCTCTCTAT+TGG 0.314267 tig0020980:-92161 None:intergenic
GCTCACAGTATTGCACATTT+GGG 0.341446 tig0020980:-90901 None:intergenic
AATTCCAACTATAGTTAATC+CGG 0.348241 tig0020980:-92997 None:intergenic
AATTCCAACTATAGTTAATC+CGG 0.348241 tig0020980:-93052 None:intergenic
ATTTAGATCTCTTCCATCAT+AGG 0.352718 tig0020980:+92366 Msa1387880:CDS
AGCAAATAGCTCAACACATC+GGG 0.358566 tig0020980:-92783 None:intergenic
ACAACAAAATTATTGAATAC+TGG 0.361221 tig0020980:-90938 None:intergenic
TTATTACAGGAGTATATTCC+TGG 0.367870 tig0020980:+92749 Msa1387880:CDS
ATCAAAATTTAAGCCTTTGA+AGG 0.371609 tig0020980:+92555 Msa1387880:CDS
CTGAATCTTTAGGTAGAGAT+TGG 0.371710 tig0020980:+93101 Msa1387880:three_prime_UTR
GGTATTCAACCTTGCCCAAT+AGG 0.371952 tig0020980:+92071 Msa1387880:intron
GATGAAAACTGTGTTTGAAT+TGG 0.375593 tig0020980:-89491 None:intergenic
TTGTGGTTTCAACCTTATAA+TGG 0.379434 tig0020980:+91569 Msa1387880:CDS
CTTCCCGGATTAACTATAGT+TGG 0.380805 tig0020980:+92993 Msa1387880:three_prime_UTR
CTTCCCGGATTAACTATAGT+TGG 0.380805 tig0020980:+93048 Msa1387880:three_prime_UTR
TCATTTATGGAAGTCAGATC+TGG 0.383012 tig0020980:+91146 Msa1387880:intron
AAGGCGGATCCACCATTATA+AGG 0.384797 tig0020980:-91581 None:intergenic
TCAAGAAAACCTCCAATTGC+AGG 0.388778 tig0020980:+92613 Msa1387880:CDS
AAGTGATGCCCTGCTTCTAC+TGG 0.394166 tig0020980:+93267 Msa1387880:three_prime_UTR
GGTGTGGTCAGATTTATTAC+AGG 0.398429 tig0020980:+92736 Msa1387880:intron
TTATGGCTGGATGTGTTGCT+TGG 0.404184 tig0020980:+92813 Msa1387880:CDS
CCCAAAATTAGGCTTTCATA+TGG 0.405670 tig0020980:-92389 None:intergenic
AAGGTGCCCTTGTAGCATTA+TGG 0.408636 tig0020980:+92134 Msa1387880:CDS
TATGGCTGGATGTGTTGCTT+GGG 0.412627 tig0020980:+92814 Msa1387880:CDS
CTGTGTTTGAATTGGAGAAT+TGG 0.415353 tig0020980:-89483 None:intergenic
CATGTGATTATGAGCATTCC+TGG 0.421682 tig0020980:+92583 Msa1387880:CDS
GTCGGTCCATCTGAATCTTT+AGG 0.423716 tig0020980:+93091 Msa1387880:three_prime_UTR
AGGTGCCCTTGTAGCATTAT+GGG 0.424361 tig0020980:+92135 Msa1387880:CDS
CAGATTCGCAATCTCATTCC+CGG 0.441058 tig0020980:+91171 Msa1387880:CDS
GGCTTTCATATGGCCTATGA+TGG 0.441407 tig0020980:-92379 None:intergenic
CTATTGCAGGTGAAAGCAAA+TGG 0.445321 tig0020980:+92329 Msa1387880:intron
AATTGCACTTCAACGCCATC+AGG 0.459373 tig0020980:+89696 Msa1387880:CDS
CTATCGTTATTCCACAAATC+AGG 0.459548 tig0020980:+89454 Msa1387880:CDS
TAATGCTACAAGGGCACCTT+CGG 0.461852 tig0020980:-92131 None:intergenic
CAGACAACAATACCTGCAAT+TGG 0.468245 tig0020980:-92625 None:intergenic
TATAATGGTGGATCCGCCTT+GGG 0.469513 tig0020980:+91584 Msa1387880:CDS
TAAACTCTCCCAGTAGAAGC+AGG 0.470930 tig0020980:-93276 None:intergenic
ATTGGTATATACCTGATTTG+TGG 0.470959 tig0020980:-89465 None:intergenic
GAGATCTAAATCACCAATCA+AGG 0.471124 tig0020980:-92354 None:intergenic
GCTCACAACTCTGCTGGTGC+TGG 0.472627 tig0020980:-89389 None:intergenic
AGAAACAGTGAAGCGGTTGT+AGG 0.473527 tig0020980:-89539 None:intergenic
TTTGAAGAAACGAGGATAGT+AGG 0.474415 tig0020980:-89569 None:intergenic
TTGCGTTTAGTGGGAGAAGA+AGG 0.481280 tig0020980:-89616 None:intergenic
TCCACTGCTCACAACTCTGC+TGG 0.484140 tig0020980:-89395 None:intergenic
AATATCTAGAATCTTGAAAG+TGG 0.484530 tig0020980:-92850 None:intergenic
CATTTATGGAAGTCAGATCT+GGG 0.495680 tig0020980:+91147 Msa1387880:intron
AAACGAGGATAGTAGGTGGA+TGG 0.496986 tig0020980:-89562 None:intergenic
CTAGTGCTCATCAGAAATCA+AGG 0.499224 tig0020980:+91613 Msa1387880:CDS
ATTTAGCGTAACAACAAGAT+CGG 0.503776 tig0020980:-90160 None:intergenic
TTATAATGGTGGATCCGCCT+TGG 0.504708 tig0020980:+91583 Msa1387880:CDS
AGGTAACAACAACTAACAAA+TGG 0.504816 tig0020980:+89417 Msa1387880:exon
TTTGCTAGAGAAATTATGGC+TGG 0.505964 tig0020980:+92800 Msa1387880:CDS
ACGTATCCGTGACACTGATA+AGG 0.508783 tig0020980:+90185 Msa1387880:CDS
ATAAGGCATAAACTATCATC+AGG 0.510527 tig0020980:-92918 None:intergenic
AAAGCAAATGGGTCCTTGAT+TGG 0.513655 tig0020980:+92341 Msa1387880:CDS
GAGTAAGTTGCTTAATAGGA+AGG 0.517447 tig0020980:-92105 None:intergenic
CCGTGACACTGATAAGGACT+TGG 0.518122 tig0020980:+90191 Msa1387880:CDS
AAAATTCAGAGATGACCATA+AGG 0.520180 tig0020980:-92935 None:intergenic
TGTGTTTAGTGTAGGAATTG+AGG 0.526558 tig0020980:+89986 Msa1387880:intron
AGCAGAGTTGTGAGCAGTGG+AGG 0.527478 tig0020980:+89397 Msa1387880:five_prime_UTR
TTTAGCGTAACAACAAGATC+GGG 0.528985 tig0020980:-90159 None:intergenic
TATTACAGGAGTATATTCCT+GGG 0.534239 tig0020980:+92750 Msa1387880:CDS
ATGTGATTATGAGCATTCCT+GGG 0.539415 tig0020980:+92584 Msa1387880:CDS
CTTCTCCCACTAAACGCAAA+CGG 0.540533 tig0020980:+89620 Msa1387880:CDS
TATGCAGCTCACACTGATTG+TGG 0.541945 tig0020980:+91552 Msa1387880:intron
TGGTTTCAACCTTATAATGG+TGG 0.547761 tig0020980:+91572 Msa1387880:CDS
TTACAAGGCCTAACCTTCCC+AGG 0.551312 tig0020980:-92419 None:intergenic
GAACGATTTAGAATGCGTAC+TGG 0.556686 tig0020980:-89517 None:intergenic
TATTGCAGGTGAAAGCAAAT+GGG 0.556753 tig0020980:+92330 Msa1387880:intron
ATTTGTTCTCTATCATTCAA+CGG 0.558103 tig0020980:-89676 None:intergenic
ACCAGCAGAGTTGTGAGCAG+TGG 0.564638 tig0020980:+89394 Msa1387880:five_prime_UTR
CATCGGGGAGGCTTGACCCC+AGG 0.572898 tig0020980:-92767 None:intergenic
ATTCCAACTATAGTTAATCC+GGG 0.573072 tig0020980:-92996 None:intergenic
ATTCCAACTATAGTTAATCC+GGG 0.573072 tig0020980:-93051 None:intergenic
TGGTTACCCATAATGCTACA+AGG 0.574789 tig0020980:-92141 None:intergenic
TGGCTGGATGTGTTGCTTGG+GGG 0.577972 tig0020980:+92816 Msa1387880:CDS
ACAACAATACCTGCAATTGG+AGG 0.578994 tig0020980:-92622 None:intergenic
TAGCAAATAGCTCAACACAT+CGG 0.581809 tig0020980:-92784 None:intergenic
AAGGTCTGGGGTTCGAACCT+CGG 0.583638 tig0020980:-93407 None:intergenic
AGTGATGCCCTGCTTCTACT+GGG 0.585834 tig0020980:+93268 Msa1387880:three_prime_UTR
ATGGCTGGATGTGTTGCTTG+GGG 0.587655 tig0020980:+92815 Msa1387880:CDS
CAACTATAGTTAATCCGGGA+AGG 0.588536 tig0020980:-92992 None:intergenic
CAACTATAGTTAATCCGGGA+AGG 0.588536 tig0020980:-93047 None:intergenic
GGCATCCTGGAAAACTGCGT+TGG 0.594288 tig0020980:+93346 Msa1387880:three_prime_UTR
CTCACAGTATTGCACATTTG+GGG 0.595476 tig0020980:-90900 None:intergenic
ATCACATGATCATCCTTCAA+AGG 0.596842 tig0020980:-92568 None:intergenic
AGTAAGTTGCTTAATAGGAA+GGG 0.601313 tig0020980:-92104 None:intergenic
TTTGGGATACAGTCCTGGGA+AGG 0.602187 tig0020980:+92406 Msa1387880:CDS
ATGTAAAAGCAGCTCTCTCG+AGG 0.609778 tig0020980:-91016 None:intergenic
CCAAGTCCTTATCAGTGTCA+CGG 0.613168 tig0020980:-90191 None:intergenic
TCTCTACCTAAAGATTCAGA+TGG 0.613786 tig0020980:-93097 None:intergenic
ATGTGCAATACTGTGAGCAA+AGG 0.621542 tig0020980:+90906 Msa1387880:CDS
AGTGGGAGAAGAAGGAACGG+TGG 0.622455 tig0020980:-89608 None:intergenic
GACACTGATAAGGACTTGGA+AGG 0.629938 tig0020980:+90195 Msa1387880:CDS
TTGAAAGAGAAGTGTGAGGG+TGG 0.631283 tig0020980:+90102 Msa1387880:CDS
TGGTGCAAATGAGTTTATGT+TGG 0.633945 tig0020980:-89369 None:intergenic
TGCTTGAAAGAGAAGTGTGA+GGG 0.641507 tig0020980:+90099 Msa1387880:CDS
ATTACAGGAGTATATTCCTG+GGG 0.642911 tig0020980:+92751 Msa1387880:CDS
GGTTACCCATAATGCTACAA+GGG 0.647091 tig0020980:-92140 None:intergenic
AAACTCTCCCAGTAGAAGCA+GGG 0.647276 tig0020980:-93275 None:intergenic
TCATGTGCTTTCATCAACAA+AGG 0.649039 tig0020980:-90009 None:intergenic
CTAGAATCTTGAAAGTGGAG+TGG 0.653474 tig0020980:-92845 None:intergenic
TGTGATTATGAGCATTCCTG+GGG 0.653506 tig0020980:+92585 Msa1387880:CDS
GTTAGGGATTTGAAGAAACG+AGG 0.658771 tig0020980:-89577 None:intergenic
AAGCAACTTACTCACACCGA+AGG 0.671839 tig0020980:+92115 Msa1387880:CDS
GAAGAAACGAGGATAGTAGG+TGG 0.675429 tig0020980:-89566 None:intergenic
TTTAGTGGGAGAAGAAGGAA+CGG 0.689478 tig0020980:-89611 None:intergenic
TTGCTTGAAAGAGAAGTGTG+AGG 0.696581 tig0020980:+90098 Msa1387880:CDS
TGGATGGAGAAACAGTGAAG+CGG 0.708388 tig0020980:-89546 None:intergenic
GCAAATAGCTCAACACATCG+GGG 0.710022 tig0020980:-92782 None:intergenic
AATAGCTCAACACATCGGGG+AGG 0.733241 tig0020980:-92779 None:intergenic
TGACACTGAAGATGACGCGG+TGG 0.770612 tig0020980:+90964 Msa1387880:CDS
TAATGACACTGAAGATGACG+CGG 0.782238 tig0020980:+90961 Msa1387880:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAGTATATTGTTTTTT+AGG + tig0020980:90266-90285 Msa1387880:intron 10.0%
!!! ACATATTTTATTTTCATTTA+TGG + tig0020980:91133-91152 Msa1387880:intron 10.0%
!!! TTATTTTCAATTTTCAATTA+GGG + tig0020980:93325-93344 Msa1387880:three_prime_UTR 10.0%
!! AAAAAAAAAAAAAAACCTGA+TGG - tig0020980:89714-89733 None:intergenic 15.0%
!! ATTGTTAAAACATGATAAAA+TGG - tig0020980:90626-90645 None:intergenic 15.0%
!! ATTTAGAAACTAAATCTATT+TGG - tig0020980:90782-90801 None:intergenic 15.0%
!!! TTTGAAATAAATCTAAGATA+TGG + tig0020980:92025-92044 Msa1387880:intron 15.0%
!!! TTTTTTTTTATTTCTTTCTG+TGG + tig0020980:93219-93238 Msa1387880:three_prime_UTR 15.0%
!!! TTTTTTTTATTTCTTTCTGT+GGG + tig0020980:93220-93239 Msa1387880:three_prime_UTR 15.0%
!!! CTTATTTTCAATTTTCAATT+AGG + tig0020980:93324-93343 Msa1387880:three_prime_UTR 15.0%
!! ATCAATAATAAGATCATTCT+GGG - tig0020980:90238-90257 None:intergenic 20.0%
!!! ATTGTTTTTTAGGATTTGAT+TGG + tig0020980:90276-90295 Msa1387880:intron 20.0%
!! TTGATTGGATATTTAATCAT+AGG + tig0020980:90291-90310 Msa1387880:intron 20.0%
!! TTTAAGAATTGTGTTCTATT+CGG - tig0020980:90331-90350 None:intergenic 20.0%
!! GTAATATCATGATAAAGAAT+TGG + tig0020980:90466-90485 Msa1387880:intron 20.0%
!!! TCTTGAGATTATTTTCAAAT+TGG + tig0020980:90533-90552 Msa1387880:intron 20.0%
!!! TTTGATGGAATATATTTTAG+TGG + tig0020980:90592-90611 Msa1387880:intron 20.0%
!!! TTGATGGAATATATTTTAGT+GGG + tig0020980:90593-90612 Msa1387880:intron 20.0%
!! ACAACAAAATTATTGAATAC+TGG - tig0020980:90941-90960 None:intergenic 20.0%
!!! AACTTTTAAGGAGAATTATT+CGG - tig0020980:91379-91398 None:intergenic 20.0%
!! AATCAAATAATGTTGATATG+TGG + tig0020980:91438-91457 Msa1387880:intron 20.0%
!!! AAATTGTTTTATACTACATC+AGG - tig0020980:91666-91685 None:intergenic 20.0%
!! TGATGTAGTATAAAACAATT+TGG + tig0020980:91665-91684 Msa1387880:intron 20.0%
!!! TTTGTATTTTCACTCTTTTT+TGG + tig0020980:91836-91855 Msa1387880:intron 20.0%
!!! TTGTATTTTCACTCTTTTTT+GGG + tig0020980:91837-91856 Msa1387880:intron 20.0%
!!! TAGATATTTTGTCAAAAAGA+TGG + tig0020980:92865-92884 Msa1387880:CDS 20.0%
!!! TGTTTCTATGTCTTATTTTT+TGG + tig0020980:93377-93396 Msa1387880:three_prime_UTR 20.0%
!!! GTTTCTATGTCTTATTTTTT+GGG + tig0020980:93378-93397 Msa1387880:three_prime_UTR 20.0%
! ATTTGTTCTCTATCATTCAA+CGG - tig0020980:89679-89698 None:intergenic 25.0%
! ATACAACAGAGTAAAATGTT+AGG - tig0020980:89769-89788 None:intergenic 25.0%
! ACTATTATTGTGTTTAGTGT+AGG + tig0020980:89978-89997 Msa1387880:intron 25.0%
!! TTGAAATCGAATGAACTTTT+GGG + tig0020980:90039-90058 Msa1387880:CDS 25.0%
! CATCAATAATAAGATCATTC+TGG - tig0020980:90239-90258 None:intergenic 25.0%
! GATATTTAATCATAGGTGAA+TGG + tig0020980:90298-90317 Msa1387880:intron 25.0%
! CATGATATTACTGCTTAAAA+AGG - tig0020980:90457-90476 None:intergenic 25.0%
! ATATCATGATAAAGAATTGG+AGG + tig0020980:90469-90488 Msa1387880:intron 25.0%
!!! TGATGGAATATATTTTAGTG+GGG + tig0020980:90594-90613 Msa1387880:intron 25.0%
! AACACAGACAAATATCTAAA+CGG - tig0020980:90755-90774 None:intergenic 25.0%
! CTAAATTGTTAATACATTGC+TGG + tig0020980:90796-90815 Msa1387880:intron 25.0%
! AAAACAACCATGATAAATTC+TGG + tig0020980:91047-91066 Msa1387880:intron 25.0%
! AAACAACCATGATAAATTCT+GGG + tig0020980:91048-91067 Msa1387880:intron 25.0%
!! TGTTGTTTATTAAGCTATCA+TGG + tig0020980:91099-91118 Msa1387880:intron 25.0%
! AATCACCTTCATAAAAGAAT+TGG + tig0020980:91303-91322 Msa1387880:intron 25.0%
! CTCTTTAATCAGACAATATA+TGG - tig0020980:91695-91714 None:intergenic 25.0%
! AATAAAGATATAAGAGATGC+AGG - tig0020980:91760-91779 None:intergenic 25.0%
!!! TGTATTTTCACTCTTTTTTG+GGG + tig0020980:91838-91857 Msa1387880:intron 25.0%
! GTATTCAATGATACTGTAAA+TGG + tig0020980:91930-91949 Msa1387880:intron 25.0%
!! AAATCTAAGATATGGTGTAT+TGG + tig0020980:92033-92052 Msa1387880:intron 25.0%
!! CCTTGTAATGTTTTACTAAT+CGG + tig0020980:92434-92453 Msa1387880:intron 25.0%
!!! TCAAAGGCTTAAATTTTGAT+TGG - tig0020980:92555-92574 None:intergenic 25.0%
! ATCAAAATTTAAGCCTTTGA+AGG + tig0020980:92555-92574 Msa1387880:CDS 25.0%
! ACTAGTTATAATGAAGTAGT+CGG + tig0020980:92681-92700 Msa1387880:intron 25.0%
!! AATATCTAGAATCTTGAAAG+TGG - tig0020980:92853-92872 None:intergenic 25.0%
!!! TTTAACTTTTTTTTCCTTCC+CGG + tig0020980:92978-92997 Msa1387880:three_prime_UTR 25.0%
! AATTCCAACTATAGTTAATC+CGG - tig0020980:93000-93019 None:intergenic 25.0%
!! ACTATAGTTGGAATTTTGAA+TGG + tig0020980:93005-93024 Msa1387880:three_prime_UTR 25.0%
! AATTCCAACTATAGTTAATC+CGG - tig0020980:93000-93019 None:intergenic 25.0%
!! ACTATAGTTGGAATTTTGAA+TGG + tig0020980:93005-93024 Msa1387880:three_prime_UTR 25.0%
! ATTTGTCAAACTAGCAATTT+GGG - tig0020980:93131-93150 None:intergenic 25.0%
! AATTTGTCAAACTAGCAATT+TGG - tig0020980:93132-93151 None:intergenic 25.0%
!! AATTGCTAGTTTGACAAATT+AGG + tig0020980:93132-93151 Msa1387880:three_prime_UTR 25.0%
AGGTAACAACAACTAACAAA+TGG + tig0020980:89417-89436 Msa1387880:exon 30.0%
! ATTGGTATATACCTGATTTG+TGG - tig0020980:89468-89487 None:intergenic 30.0%
GATGAAAACTGTGTTTGAAT+TGG - tig0020980:89494-89513 None:intergenic 30.0%
! GTTGAAATCGAATGAACTTT+TGG + tig0020980:90038-90057 Msa1387880:CDS 30.0%
ATTTAGCGTAACAACAAGAT+CGG - tig0020980:90163-90182 None:intergenic 30.0%
ATGAGTAATTGATCATGCAT+TGG + tig0020980:90563-90582 Msa1387880:intron 30.0%
TTTATCATCTATATGAACGC+AGG + tig0020980:90697-90716 Msa1387880:intron 30.0%
AGTTATGTATGAACCATTAC+CGG - tig0020980:91193-91212 None:intergenic 30.0%
! TTATTTCTTGTTATATGCCG+TGG + tig0020980:91219-91238 Msa1387880:intron 30.0%
TTGTGGTTTCAACCTTATAA+TGG + tig0020980:91569-91588 Msa1387880:CDS 30.0%
GACGAATAAGATTTGTACTA+TGG + tig0020980:91637-91656 Msa1387880:intron 30.0%
!!! GTATTTTCACTCTTTTTTGG+GGG + tig0020980:91839-91858 Msa1387880:intron 30.0%
!!! TATTTTCACTCTTTTTTGGG+GGG + tig0020980:91840-91859 Msa1387880:intron 30.0%
TTACTCAGTTTAAACTGGTT+GGG + tig0020980:91990-92009 Msa1387880:intron 30.0%
!! AGGGATAAAAAGTACCTATT+GGG - tig0020980:92088-92107 None:intergenic 30.0%
!! AAGGGATAAAAAGTACCTAT+TGG - tig0020980:92089-92108 None:intergenic 30.0%
AGTAAGTTGCTTAATAGGAA+GGG - tig0020980:92107-92126 None:intergenic 30.0%
AATGACATCAAACACTTGTA+TGG - tig0020980:92281-92300 None:intergenic 30.0%
ATTTAGATCTCTTCCATCAT+AGG + tig0020980:92366-92385 Msa1387880:CDS 30.0%
! CCATATGAAAGCCTAATTTT+GGG + tig0020980:92389-92408 Msa1387880:CDS 30.0%
CCGATTAGTAAAACATTACA+AGG - tig0020980:92437-92456 None:intergenic 30.0%
TTTCTTATATCTCTCACTTG+TGG + tig0020980:92495-92514 Msa1387880:intron 30.0%
! TTATTACAGGAGTATATTCC+TGG + tig0020980:92749-92768 Msa1387880:CDS 30.0%
! TATTACAGGAGTATATTCCT+GGG + tig0020980:92750-92769 Msa1387880:CDS 30.0%
! GCTATTTGCTAGAGAAATTA+TGG + tig0020980:92796-92815 Msa1387880:CDS 30.0%
! GGCTAGCTAATTCTTTAAAA+AGG + tig0020980:92886-92905 Msa1387880:exon 30.0%
ATAAGGCATAAACTATCATC+AGG - tig0020980:92921-92940 None:intergenic 30.0%
TGATGATAGTTTATGCCTTA+TGG + tig0020980:92920-92939 Msa1387880:three_prime_UTR 30.0%
AAAATTCAGAGATGACCATA+AGG - tig0020980:92938-92957 None:intergenic 30.0%
ATTCCAACTATAGTTAATCC+GGG - tig0020980:92999-93018 None:intergenic 30.0%
ATTCCAACTATAGTTAATCC+GGG - tig0020980:92999-93018 None:intergenic 30.0%
!!! TCTATGTCTTATTTTTTGGG+TGG + tig0020980:93381-93400 Msa1387880:three_prime_UTR 30.0%
TGGTGCAAATGAGTTTATGT+TGG - tig0020980:89372-89391 None:intergenic 35.0%
CTATCGTTATTCCACAAATC+AGG + tig0020980:89454-89473 Msa1387880:CDS 35.0%
CTGTGTTTGAATTGGAGAAT+TGG - tig0020980:89486-89505 None:intergenic 35.0%
TTTGAAGAAACGAGGATAGT+AGG - tig0020980:89572-89591 None:intergenic 35.0%
! TTTTTCCGTTTGCGTTTAGT+GGG - tig0020980:89628-89647 None:intergenic 35.0%
!!! TTTTTTCCGTTTGCGTTTAG+TGG - tig0020980:89629-89648 None:intergenic 35.0%
TAATGGTATTGTGTCTGTGT+CGG - tig0020980:89808-89827 None:intergenic 35.0%
TGTGTTTAGTGTAGGAATTG+AGG + tig0020980:89986-90005 Msa1387880:intron 35.0%
TCATGTGCTTTCATCAACAA+AGG - tig0020980:90012-90031 None:intergenic 35.0%
!! TGAACACTGTTTTGTTGAAC+TGG + tig0020980:90125-90144 Msa1387880:CDS 35.0%
!! GAACACTGTTTTGTTGAACT+GGG + tig0020980:90126-90145 Msa1387880:CDS 35.0%
TTTAGCGTAACAACAAGATC+GGG - tig0020980:90162-90181 None:intergenic 35.0%
! ATGCATTGGATGCTATTTGA+TGG + tig0020980:90577-90596 Msa1387880:intron 35.0%
ACACATCCCAGAATTTATCA+TGG - tig0020980:91057-91076 None:intergenic 35.0%
TCATTTATGGAAGTCAGATC+TGG + tig0020980:91146-91165 Msa1387880:intron 35.0%
CATTTATGGAAGTCAGATCT+GGG + tig0020980:91147-91166 Msa1387880:intron 35.0%
GTTATGTATGAACCATTACC+GGG - tig0020980:91192-91211 None:intergenic 35.0%
ACAGATATGATGAAGAACCA+CGG - tig0020980:91239-91258 None:intergenic 35.0%
! GGATGCCAATTCTTTTATGA+AGG - tig0020980:91311-91330 None:intergenic 35.0%
! CACATGTCATGCAACTTTTA+AGG - tig0020980:91391-91410 None:intergenic 35.0%
AAGTTGCATGACATGTGAAT+TGG + tig0020980:91394-91413 Msa1387880:intron 35.0%
AGTTGCATGACATGTGAATT+GGG + tig0020980:91395-91414 Msa1387880:intron 35.0%
! AGAACTTGTTTGTGTTTAGC+TGG + tig0020980:91478-91497 Msa1387880:intron 35.0%
TGGTTTCAACCTTATAATGG+TGG + tig0020980:91572-91591 Msa1387880:CDS 35.0%
TCAATAAGTTTGCGAGAGAA+AGG - tig0020980:91794-91813 None:intergenic 35.0%
GCTCATAGCATGAAAATGAA+CGG + tig0020980:91873-91892 Msa1387880:intron 35.0%
AGCTGTTACTCAGTTTAAAC+TGG + tig0020980:91985-92004 Msa1387880:intron 35.0%
GTTACTCAGTTTAAACTGGT+TGG + tig0020980:91989-92008 Msa1387880:intron 35.0%
AGTTTAAACTGGTTGGGAAA+TGG + tig0020980:91996-92015 Msa1387880:intron 35.0%
GTTTAAACTGGTTGGGAAAT+GGG + tig0020980:91997-92016 Msa1387880:intron 35.0%
TTTAAACTGGTTGGGAAATG+GGG + tig0020980:91998-92017 Msa1387880:intron 35.0%
TATTGGTGTGTCATCTATGT+AGG + tig0020980:92050-92069 Msa1387880:intron 35.0%
!! TAAAAAGTACCTATTGGGCA+AGG - tig0020980:92083-92102 None:intergenic 35.0%
GAGTAAGTTGCTTAATAGGA+AGG - tig0020980:92108-92127 None:intergenic 35.0%
GTGTGAGTAAGTTGCTTAAT+AGG - tig0020980:92112-92131 None:intergenic 35.0%
!! TGCAAGTTTTCATTGGTTGA+AGG + tig0020980:92228-92247 Msa1387880:CDS 35.0%
!! AAGTTTTCATTGGTTGAAGG+TGG + tig0020980:92231-92250 Msa1387880:intron 35.0%
CACTTGTATGGAAAGCAAAT+GGG - tig0020980:92269-92288 None:intergenic 35.0%
ACACTTGTATGGAAAGCAAA+TGG - tig0020980:92270-92289 None:intergenic 35.0%
AGACAACAAGTACAAGAGAT+TGG - tig0020980:92311-92330 None:intergenic 35.0%
!! TTGTACTTGTTGTCTATTGC+AGG + tig0020980:92316-92335 Msa1387880:intron 35.0%
TATTGCAGGTGAAAGCAAAT+GGG + tig0020980:92330-92349 Msa1387880:intron 35.0%
GAGATCTAAATCACCAATCA+AGG - tig0020980:92357-92376 None:intergenic 35.0%
! GCCATATGAAAGCCTAATTT+TGG + tig0020980:92388-92407 Msa1387880:CDS 35.0%
CCCAAAATTAGGCTTTCATA+TGG - tig0020980:92392-92411 None:intergenic 35.0%
!!! TAATTTTGGGATACAGTCCT+GGG + tig0020980:92402-92421 Msa1387880:CDS 35.0%
! TGTGGTGTATGGTATTTTCT+AGG + tig0020980:92513-92532 Msa1387880:intron 35.0%
ATCACATGATCATCCTTCAA+AGG - tig0020980:92571-92590 None:intergenic 35.0%
ATGTGATTATGAGCATTCCT+GGG + tig0020980:92584-92603 Msa1387880:CDS 35.0%
! ATTACAGGAGTATATTCCTG+GGG + tig0020980:92751-92770 Msa1387880:CDS 35.0%
TAGCAAATAGCTCAACACAT+CGG - tig0020980:92787-92806 None:intergenic 35.0%
TTTGCTAGAGAAATTATGGC+TGG + tig0020980:92800-92819 Msa1387880:CDS 35.0%
! TTTTGAATGGTTAGTGCAGT+TGG + tig0020980:93018-93037 Msa1387880:three_prime_UTR 35.0%
! TTTTGAATGGTTAGTGCAGT+CGG + tig0020980:93018-93037 Msa1387880:three_prime_UTR 35.0%
TCTCTACCTAAAGATTCAGA+TGG - tig0020980:93100-93119 None:intergenic 35.0%
CTGAATCTTTAGGTAGAGAT+TGG + tig0020980:93101-93120 Msa1387880:three_prime_UTR 35.0%
!! AATTTTCAATTAGGGCATCC+TGG + tig0020980:93333-93352 Msa1387880:three_prime_UTR 35.0%
! GAACGATTTAGAATGCGTAC+TGG - tig0020980:89520-89539 None:intergenic 40.0%
GTTAGGGATTTGAAGAAACG+AGG - tig0020980:89580-89599 None:intergenic 40.0%
TTTAGTGGGAGAAGAAGGAA+CGG - tig0020980:89614-89633 None:intergenic 40.0%
GCAAACGGAAAAAACGAAAG+CGG + tig0020980:89635-89654 Msa1387880:CDS 40.0%
GAAAAAACGAAAGCGGAGTT+CGG + tig0020980:89642-89661 Msa1387880:CDS 40.0%
! TTGCTTGAAAGAGAAGTGTG+AGG + tig0020980:90098-90117 Msa1387880:CDS 40.0%
! TGCTTGAAAGAGAAGTGTGA+GGG + tig0020980:90099-90118 Msa1387880:CDS 40.0%
AGGCTAAGACTTGCAATCAA+GGG + tig0020980:90717-90736 Msa1387880:intron 40.0%
CTTAGATTGTGTGTAGTTGC+TGG + tig0020980:90830-90849 Msa1387880:intron 40.0%
CTCACAGTATTGCACATTTG+GGG - tig0020980:90903-90922 None:intergenic 40.0%
GCTCACAGTATTGCACATTT+GGG - tig0020980:90904-90923 None:intergenic 40.0%
TGCTCACAGTATTGCACATT+TGG - tig0020980:90905-90924 None:intergenic 40.0%
ATGTGCAATACTGTGAGCAA+AGG + tig0020980:90906-90925 Msa1387880:CDS 40.0%
TAATGACACTGAAGATGACG+CGG + tig0020980:90961-90980 Msa1387880:CDS 40.0%
GTGGTTCTTCATCATATCTG+TGG + tig0020980:91238-91257 Msa1387880:intron 40.0%
GTTGCATGACATGTGAATTG+GGG + tig0020980:91396-91415 Msa1387880:intron 40.0%
ATTGGGGTTGTCTTGAATGT+TGG + tig0020980:91412-91431 Msa1387880:intron 40.0%
TGTGTTTAGCTGGTCAAGTA+TGG + tig0020980:91488-91507 Msa1387880:intron 40.0%
GTGTTTAGCTGGTCAAGTAT+GGG + tig0020980:91489-91508 Msa1387880:intron 40.0%
TGTTTAGCTGGTCAAGTATG+GGG + tig0020980:91490-91509 Msa1387880:intron 40.0%
CTAGTGCTCATCAGAAATCA+AGG + tig0020980:91613-91632 Msa1387880:CDS 40.0%
TCTCTCGCAAACTTATTGAG+AGG + tig0020980:91795-91814 Msa1387880:intron 40.0%
GGTTACCCATAATGCTACAA+GGG - tig0020980:92143-92162 None:intergenic 40.0%
TGGTTACCCATAATGCTACA+AGG - tig0020980:92144-92163 None:intergenic 40.0%
ACTACGTAGCTTCTCTCTAT+TGG - tig0020980:92164-92183 None:intergenic 40.0%
! GCTATGCTGCAAGTTTTCAT+TGG + tig0020980:92221-92240 Msa1387880:CDS 40.0%
CTATTGCAGGTGAAAGCAAA+TGG + tig0020980:92329-92348 Msa1387880:intron 40.0%
AAAGCAAATGGGTCCTTGAT+TGG + tig0020980:92341-92360 Msa1387880:CDS 40.0%
CAGGACTGTATCCCAAAATT+AGG - tig0020980:92403-92422 None:intergenic 40.0%
!!! CTAATTTTGGGATACAGTCC+TGG + tig0020980:92401-92420 Msa1387880:CDS 40.0%
GCCTTCTAAGTTCCAACTAT+CGG + tig0020980:92456-92475 Msa1387880:intron 40.0%
ACCGATAGTTGGAACTTAGA+AGG - tig0020980:92460-92479 None:intergenic 40.0%
GTGAGAGAAAAACCGATAGT+TGG - tig0020980:92471-92490 None:intergenic 40.0%
TATCTCTCACTTGTGGTGTA+TGG + tig0020980:92502-92521 Msa1387880:intron 40.0%
CATGTGATTATGAGCATTCC+TGG + tig0020980:92583-92602 Msa1387880:CDS 40.0%
TGTGATTATGAGCATTCCTG+GGG + tig0020980:92585-92604 Msa1387880:CDS 40.0%
TCAAGAAAACCTCCAATTGC+AGG + tig0020980:92613-92632 Msa1387880:CDS 40.0%
ACAACAATACCTGCAATTGG+AGG - tig0020980:92625-92644 None:intergenic 40.0%
CAGACAACAATACCTGCAAT+TGG - tig0020980:92628-92647 None:intergenic 40.0%
! CAATTGCAGGTATTGTTGTC+TGG + tig0020980:92626-92645 Msa1387880:intron 40.0%
GGTGTGGTCAGATTTATTAC+AGG + tig0020980:92736-92755 Msa1387880:intron 40.0%
AGCAAATAGCTCAACACATC+GGG - tig0020980:92786-92805 None:intergenic 40.0%
CTAGAATCTTGAAAGTGGAG+TGG - tig0020980:92848-92867 None:intergenic 40.0%
CAACTATAGTTAATCCGGGA+AGG - tig0020980:92995-93014 None:intergenic 40.0%
CTTCCCGGATTAACTATAGT+TGG + tig0020980:92993-93012 Msa1387880:three_prime_UTR 40.0%
CAACTATAGTTAATCCGGGA+AGG - tig0020980:92995-93014 None:intergenic 40.0%
CTTCCCGGATTAACTATAGT+TGG + tig0020980:92993-93012 Msa1387880:three_prime_UTR 40.0%
AGAAACAGTGAAGCGGTTGT+AGG - tig0020980:89542-89561 None:intergenic 45.0%
TGGATGGAGAAACAGTGAAG+CGG - tig0020980:89549-89568 None:intergenic 45.0%
AAACGAGGATAGTAGGTGGA+TGG - tig0020980:89565-89584 None:intergenic 45.0%
GAAGAAACGAGGATAGTAGG+TGG - tig0020980:89569-89588 None:intergenic 45.0%
!! AAGAAGGAACGGTGGTTTTG+GGG - tig0020980:89603-89622 None:intergenic 45.0%
! GAAGAAGGAACGGTGGTTTT+GGG - tig0020980:89604-89623 None:intergenic 45.0%
! AGAAGAAGGAACGGTGGTTT+TGG - tig0020980:89605-89624 None:intergenic 45.0%
TTGCGTTTAGTGGGAGAAGA+AGG - tig0020980:89619-89638 None:intergenic 45.0%
CTTCTCCCACTAAACGCAAA+CGG + tig0020980:89620-89639 Msa1387880:CDS 45.0%
AATTGCACTTCAACGCCATC+AGG + tig0020980:89696-89715 Msa1387880:CDS 45.0%
CACATGTGCAAGTGTCTTGT+AGG + tig0020980:89886-89905 Msa1387880:intron 45.0%
! TTGAAAGAGAAGTGTGAGGG+TGG + tig0020980:90102-90121 Msa1387880:CDS 45.0%
ACGTATCCGTGACACTGATA+AGG + tig0020980:90185-90204 Msa1387880:CDS 45.0%
CCAAGTCCTTATCAGTGTCA+CGG - tig0020980:90194-90213 None:intergenic 45.0%
GACACTGATAAGGACTTGGA+AGG + tig0020980:90195-90214 Msa1387880:CDS 45.0%
CAGGCTAAGACTTGCAATCA+AGG + tig0020980:90716-90735 Msa1387880:intron 45.0%
TTGTGTGTAGTTGCTGGTGT+AGG + tig0020980:90836-90855 Msa1387880:intron 45.0%
ATGTAAAAGCAGCTCTCTCG+AGG - tig0020980:91019-91038 None:intergenic 45.0%
!!! TCGAGAGAGCTGCTTTTACA+TGG + tig0020980:91018-91037 Msa1387880:CDS 45.0%
CAGATTCGCAATCTCATTCC+CGG + tig0020980:91171-91190 Msa1387880:CDS 45.0%
! TATGCAGCTCACACTGATTG+TGG + tig0020980:91552-91571 Msa1387880:intron 45.0%
AAGGCGGATCCACCATTATA+AGG - tig0020980:91584-91603 None:intergenic 45.0%
!! TTATAATGGTGGATCCGCCT+TGG + tig0020980:91583-91602 Msa1387880:CDS 45.0%
!! TATAATGGTGGATCCGCCTT+GGG + tig0020980:91584-91603 Msa1387880:CDS 45.0%
! TGAGCACTAGCATTTTCCCA+AGG - tig0020980:91603-91622 None:intergenic 45.0%
!!! TTTCACTCTTTTTTGGGGGG+TGG + tig0020980:91843-91862 Msa1387880:intron 45.0%
GGTATTCAACCTTGCCCAAT+AGG + tig0020980:92071-92090 Msa1387880:intron 45.0%
AAGCAACTTACTCACACCGA+AGG + tig0020980:92115-92134 Msa1387880:CDS 45.0%
!! TAATGCTACAAGGGCACCTT+CGG - tig0020980:92134-92153 None:intergenic 45.0%
! AAGGTGCCCTTGTAGCATTA+TGG + tig0020980:92134-92153 Msa1387880:CDS 45.0%
AGGTGCCCTTGTAGCATTAT+GGG + tig0020980:92135-92154 Msa1387880:CDS 45.0%
! AGAAAGAGCTTTTTGCAGCG+TGG + tig0020980:92191-92210 Msa1387880:CDS 45.0%
! GAAAGAGCTTTTTGCAGCGT+GGG + tig0020980:92192-92211 Msa1387880:CDS 45.0%
! AAAGAGCTTTTTGCAGCGTG+GGG + tig0020980:92193-92212 Msa1387880:CDS 45.0%
GGCTTTCATATGGCCTATGA+TGG - tig0020980:92382-92401 None:intergenic 45.0%
! GGTTTTCTTGAGTAATCCCC+AGG - tig0020980:92604-92623 None:intergenic 45.0%
ACGCTGAAGTTTCTTCGTAC+TGG + tig0020980:92715-92734 Msa1387880:intron 45.0%
! GAAGTTTCTTCGTACTGGTG+TGG + tig0020980:92720-92739 Msa1387880:intron 45.0%
GCAAATAGCTCAACACATCG+GGG - tig0020980:92785-92804 None:intergenic 45.0%
! TTATGGCTGGATGTGTTGCT+TGG + tig0020980:92813-92832 Msa1387880:CDS 45.0%
!! TATGGCTGGATGTGTTGCTT+GGG + tig0020980:92814-92833 Msa1387880:CDS 45.0%
! GCAGTTGGAATTTTCCTTCC+CGG + tig0020980:93033-93052 Msa1387880:three_prime_UTR 45.0%
GTCGGTCCATCTGAATCTTT+AGG + tig0020980:93091-93110 Msa1387880:three_prime_UTR 45.0%
AAACTCTCCCAGTAGAAGCA+GGG - tig0020980:93278-93297 None:intergenic 45.0%
TAAACTCTCCCAGTAGAAGC+AGG - tig0020980:93279-93298 None:intergenic 45.0%
! TCATACCAACGCAGTTTTCC+AGG - tig0020980:93354-93373 None:intergenic 45.0%
!!! TATTTTTTGGGTGGTGACCG+AGG + tig0020980:93390-93409 Msa1387880:three_prime_UTR 45.0%
!! AATATTATTAATAAGTAAAA+AGG - tig0020980:91332-91351 None:intergenic 5.0%
!!! AACGGTGGTTTTGGGGGTTA+GGG - tig0020980:89596-89615 None:intergenic 50.0%
!!! AGAAGGAACGGTGGTTTTGG+GGG - tig0020980:89602-89621 None:intergenic 50.0%
!! CCACGTGTCAGCATTGGTAA+TGG - tig0020980:89825-89844 None:intergenic 50.0%
CCATTACCAATGCTGACACG+TGG + tig0020980:89822-89841 Msa1387880:intron 50.0%
AAGTGTCCACGTGTCAGCAT+TGG - tig0020980:89831-89850 None:intergenic 50.0%
CCGTGACACTGATAAGGACT+TGG + tig0020980:90191-90210 Msa1387880:CDS 50.0%
CGCAATCTCATTCCCGGTAA+TGG + tig0020980:91177-91196 Msa1387880:intron 50.0%
! GCACTAGCATTTTCCCAAGG+CGG - tig0020980:91600-91619 None:intergenic 50.0%
!!! ACTCTTTTTTGGGGGGTGGA+GGG + tig0020980:91847-91866 Msa1387880:intron 50.0%
! AAGAGCTTTTTGCAGCGTGG+GGG + tig0020980:92194-92213 Msa1387880:CDS 50.0%
! TTTGGGATACAGTCCTGGGA+AGG + tig0020980:92406-92425 Msa1387880:CDS 50.0%
GATACAGTCCTGGGAAGGTT+AGG + tig0020980:92411-92430 Msa1387880:intron 50.0%
TTACAAGGCCTAACCTTCCC+AGG - tig0020980:92422-92441 None:intergenic 50.0%
AATAGCTCAACACATCGGGG+AGG - tig0020980:92782-92801 None:intergenic 50.0%
!! ATGGCTGGATGTGTTGCTTG+GGG + tig0020980:92815-92834 Msa1387880:CDS 50.0%
AAGTGATGCCCTGCTTCTAC+TGG + tig0020980:93267-93286 Msa1387880:three_prime_UTR 50.0%
AGTGATGCCCTGCTTCTACT+GGG + tig0020980:93268-93287 Msa1387880:three_prime_UTR 50.0%
ACCAGCAGAGTTGTGAGCAG+TGG + tig0020980:89394-89413 Msa1387880:five_prime_UTR 55.0%
TCCACTGCTCACAACTCTGC+TGG - tig0020980:89398-89417 None:intergenic 55.0%
AGCAGAGTTGTGAGCAGTGG+AGG + tig0020980:89397-89416 Msa1387880:five_prime_UTR 55.0%
!!! GAACGGTGGTTTTGGGGGTT+AGG - tig0020980:89597-89616 None:intergenic 55.0%
AGTGGGAGAAGAAGGAACGG+TGG - tig0020980:89611-89630 None:intergenic 55.0%
TGACACTGAAGATGACGCGG+TGG + tig0020980:90964-90983 Msa1387880:CDS 55.0%
!!! CACTCTTTTTTGGGGGGTGG+AGG + tig0020980:91846-91865 Msa1387880:intron 55.0%
!!! CTCTTTTTTGGGGGGTGGAG+GGG + tig0020980:91848-91867 Msa1387880:intron 55.0%
! AGAGCTTTTTGCAGCGTGGG+GGG + tig0020980:92195-92214 Msa1387880:CDS 55.0%
!! TGGCTGGATGTGTTGCTTGG+GGG + tig0020980:92816-92835 Msa1387880:CDS 55.0%
GGCATCCTGGAAAACTGCGT+TGG + tig0020980:93346-93365 Msa1387880:three_prime_UTR 55.0%
GCTCACAACTCTGCTGGTGC+TGG - tig0020980:89392-89411 None:intergenic 60.0%
CATCGGGGAGGCTTGACCCC+AGG - tig0020980:92770-92789 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0020980 gene 89357 93419 89357 ID=Msa1387880;Name=Msa1387880
tig0020980 mRNA 89357 93419 89357 ID=Msa1387880-mRNA-1;Parent=Msa1387880;Name=Msa1387880-mRNA-1;_AED=0.06;_eAED=0.06;_QI=79|1|1|1|1|1|9|524|422
tig0020980 exon 89357 89717 89357 ID=Msa1387880-mRNA-1:exon:10862;Parent=Msa1387880-mRNA-1
tig0020980 exon 90000 90216 90000 ID=Msa1387880-mRNA-1:exon:10863;Parent=Msa1387880-mRNA-1
tig0020980 exon 90897 91039 90897 ID=Msa1387880-mRNA-1:exon:10864;Parent=Msa1387880-mRNA-1
tig0020980 exon 91159 91192 91159 ID=Msa1387880-mRNA-1:exon:10865;Parent=Msa1387880-mRNA-1
tig0020980 exon 91559 91634 91559 ID=Msa1387880-mRNA-1:exon:10866;Parent=Msa1387880-mRNA-1
tig0020980 exon 92072 92249 92072 ID=Msa1387880-mRNA-1:exon:10867;Parent=Msa1387880-mRNA-1
tig0020980 exon 92338 92427 92338 ID=Msa1387880-mRNA-1:exon:10868;Parent=Msa1387880-mRNA-1
tig0020980 exon 92535 92634 92535 ID=Msa1387880-mRNA-1:exon:10869;Parent=Msa1387880-mRNA-1
tig0020980 exon 92747 93419 92747 ID=Msa1387880-mRNA-1:exon:10870;Parent=Msa1387880-mRNA-1
tig0020980 five_prime_UTR 89357 89435 89357 ID=Msa1387880-mRNA-1:five_prime_utr;Parent=Msa1387880-mRNA-1
tig0020980 CDS 89436 89717 89436 ID=Msa1387880-mRNA-1:cds;Parent=Msa1387880-mRNA-1
tig0020980 CDS 90000 90216 90000 ID=Msa1387880-mRNA-1:cds;Parent=Msa1387880-mRNA-1
tig0020980 CDS 90897 91039 90897 ID=Msa1387880-mRNA-1:cds;Parent=Msa1387880-mRNA-1
tig0020980 CDS 91159 91192 91159 ID=Msa1387880-mRNA-1:cds;Parent=Msa1387880-mRNA-1
tig0020980 CDS 91559 91634 91559 ID=Msa1387880-mRNA-1:cds;Parent=Msa1387880-mRNA-1
tig0020980 CDS 92072 92249 92072 ID=Msa1387880-mRNA-1:cds;Parent=Msa1387880-mRNA-1
tig0020980 CDS 92338 92427 92338 ID=Msa1387880-mRNA-1:cds;Parent=Msa1387880-mRNA-1
tig0020980 CDS 92535 92634 92535 ID=Msa1387880-mRNA-1:cds;Parent=Msa1387880-mRNA-1
tig0020980 CDS 92747 92895 92747 ID=Msa1387880-mRNA-1:cds;Parent=Msa1387880-mRNA-1
tig0020980 three_prime_UTR 92896 93419 92896 ID=Msa1387880-mRNA-1:three_prime_utr;Parent=Msa1387880-mRNA-1
Gene Sequence

>Msa1387880

ATGGAAGACTCACAGAAGCTATCGTTATTCCACAAATCAGGTATATACCAATTCTCCAATTCAAACACAGTTTTCATCGATCCAGTACGCATTCTAAATCGTTCCTACAACCGCTTCACTGTTTCTCCATCCACCTACTATCCTCGTTTCTTCAAATCCCTAACCCCCAAAACCACCGTTCCTTCTTCTCCCACTAAACGCAAACGGAAAAAACGAAAGCGGAGTTCGGAAGAATCTCGACCGTTGAATGATAGAGAACAAATTGCACTTCAACGCCATCAGGAATTGAGGCCTTTGTTGATGAAAGCACATGAGTGTTTGTTGAAATCGAATGAACTTTTGGGTGCTCTGAAAGATTTGAGAAGTGAAAGTGATTCTTGTTGCTTGAAAGAGAAGTGTGAGGGTGGTGAACACTGTTTTGTTGAACTGGGACAGCAAGTGCCCGATCTTGTTGTTACGCTAAATTTACGTATCCGTGACACTGATAAGGACTTGGAAGATTCCCCAAATGTGCAATACTGTGAGCAAAGGTCGATACTACCAGTATTCAATAATTTTGTTGTTAATGACACTGAAGATGACGCGGTGGCTGAGATTTTGAACAATCATTATATAATGCCTCGAGAGAGCTGCTTTTACATGTCAGATCTGGGACAGATTCGCAATCTCATTCCCGCTCACACTGATTGTGGTTTCAACCTTATAATGGTGGATCCGCCTTGGGAAAATGCTAGTGCTCATCAGAAATCAAGGTATTCAACCTTGCCCAATAGGTACTTTTTATCCCTTCCTATTAAGCAACTTACTCACACCGAAGGTGCCCTTGTAGCATTATGGGTAACCAATAGAGAGAAGCTACGTAGTTTTGTCGAGAAAGAGCTTTTTGCAGCGTGGGGGGTCAGCTATGCTGCAAGTTTTCATTGGTTGAAGGTGAAAGCAAATGGGTCCTTGATTGGTGATTTAGATCTCTTCCATCATAGGCCATATGAAAGCCTAATTTTGGGATACAGTCCTGGGAAGGTAAAAAATTCTGATAACCAATCAAAATTTAAGCCTTTGAAGGATGATCATGTGATTATGAGCATTCCTGGGGATTACTCAAGAAAACCTCCAATTGCAGATTTATTACAGGAGTATATTCCTGGGGTCAAGCCTCCCCGATGTGTTGAGCTATTTGCTAGAGAAATTATGGCTGGATGTGTTGCTTGGGGGAATGAACCACTCCACTTTCAAGATTCTAGATATTTTGTCAAAAAGATGGCTAGCTAA
Protein sequence

>Msa1387880

MEDSQKLSLFHKSGIYQFSNSNTVFIDPVRILNRSYNRFTVSPSTYYPRFFKSLTPKTTVPSSPTKRKRKKRKRSSEESRPLNDREQIALQRHQELRPLLMKAHECLLKSNELLGALKDLRSESDSCCLKEKCEGGEHCFVELGQQVPDLVVTLNLRIRDTDKDLEDSPNVQYCEQRSILPVFNNFVVNDTEDDAVAEILNNHYIMPRESCFYMSDLGQIRNLIPAHTDCGFNLIMVDPPWENASAHQKSRYSTLPNRYFLSLPIKQLTHTEGALVALWVTNREKLRSFVEKELFAAWGVSYAASFHWLKVKANGSLIGDLDLFHHRPYESLILGYSPGKVKNSDNQSKFKPLKDDHVIMSIPGDYSRKPPIADLLQEYIPGVKPPRCVELFAREIMAGCVAWGNEPLHFQDSRYFVKKMAS*