Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0068010 | PWA99188.1 | 60.496 | 605 | 117 | 7 | 22 | 547 | 4 | 565 | 0.0 | 683 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0068010 | sp|Q6K508|GLUD1_ORYSJ | 25.526 | 333 | 171 | 9 | 19 | 278 | 40 | 368 | 5.61e-22 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0068010 | A0A2U1QMH3 | 60.496 | 605 | 117 | 7 | 22 | 547 | 4 | 565 | 0.0 | 683 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0068010 | Msa0068680 | 0.804082 | 2.562130e-49 | -8.615850e-47 |
| Msa0068010 | Msa0157290 | 0.800777 | 1.229327e-48 | -8.615850e-47 |
| Msa0068010 | Msa0523460 | 0.810567 | 1.081188e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0068010 | MtrunA17_Chr4g0030791 | 95.736 | 258 | 11 | 0 | 22 | 279 | 4 | 261 | 6.47e-177 | 503 |
| Msa0068010 | MtrunA17_Chr4g0030791 | 73.775 | 347 | 12 | 5 | 279 | 546 | 9 | 355 | 4.06e-164 | 470 |
| Msa0068010 | MtrunA17_Chr4g0030781 | 95.349 | 258 | 12 | 0 | 22 | 279 | 4 | 261 | 5.74e-176 | 500 |
| Msa0068010 | MtrunA17_Chr4g0030781 | 73.487 | 347 | 13 | 5 | 279 | 546 | 9 | 355 | 2.40e-163 | 468 |
| Msa0068010 | MtrunA17_Chr4g0036721 | 95.349 | 258 | 12 | 0 | 22 | 279 | 4 | 261 | 7.37e-176 | 500 |
| Msa0068010 | MtrunA17_Chr4g0036721 | 73.199 | 347 | 14 | 5 | 279 | 546 | 9 | 355 | 5.14e-163 | 467 |
| Msa0068010 | MtrunA17_Chr4g0014171 | 94.574 | 258 | 14 | 0 | 22 | 279 | 4 | 261 | 2.37e-174 | 496 |
| Msa0068010 | MtrunA17_Chr4g0014171 | 73.487 | 347 | 13 | 5 | 279 | 546 | 9 | 355 | 1.04e-163 | 469 |
| Msa0068010 | MtrunA17_Chr8g0380731 | 36.923 | 260 | 162 | 2 | 22 | 279 | 4 | 263 | 5.64e-59 | 199 |
| Msa0068010 | MtrunA17_Chr8g0380731 | 34.483 | 348 | 146 | 7 | 280 | 545 | 10 | 357 | 9.41e-58 | 196 |
| Msa0068010 | MtrunA17_Chr5g0405881 | 71.812 | 149 | 4 | 3 | 409 | 546 | 134 | 255 | 1.40e-57 | 192 |
| Msa0068010 | MtrunA17_Chr5g0405881 | 72.881 | 118 | 5 | 1 | 162 | 279 | 71 | 161 | 1.76e-46 | 163 |
| Msa0068010 | MtrunA17_Chr8g0380751 | 37.447 | 235 | 145 | 2 | 47 | 279 | 1 | 235 | 4.13e-54 | 185 |
| Msa0068010 | MtrunA17_Chr8g0380751 | 31.894 | 301 | 124 | 7 | 299 | 518 | 1 | 301 | 4.65e-43 | 155 |
| Msa0068010 | MtrunA17_Chr8g0380741 | 33.628 | 339 | 144 | 6 | 280 | 537 | 10 | 348 | 5.74e-53 | 184 |
| Msa0068010 | MtrunA17_Chr8g0380741 | 35.000 | 260 | 167 | 2 | 22 | 279 | 4 | 263 | 1.20e-51 | 180 |
| Msa0068010 | MtrunA17_Chr7g0227371 | 86.111 | 36 | 5 | 0 | 49 | 84 | 1 | 36 | 2.65e-13 | 65.9 |
| Msa0068010 | MtrunA17_Chr7g0261321 | 24.681 | 235 | 127 | 7 | 6 | 198 | 27 | 253 | 5.24e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0068010 | AT1G07750.1 | 77.323 | 269 | 58 | 1 | 22 | 287 | 4 | 272 | 3.38e-147 | 427 |
| Msa0068010 | AT1G07750.1 | 60.694 | 346 | 57 | 6 | 279 | 545 | 9 | 354 | 9.11e-128 | 378 |
| Msa0068010 | AT2G28680.1 | 75.465 | 269 | 63 | 1 | 22 | 287 | 4 | 272 | 3.61e-143 | 417 |
| Msa0068010 | AT2G28680.1 | 60.116 | 346 | 59 | 6 | 279 | 545 | 9 | 354 | 4.03e-127 | 376 |
| Msa0068010 | AT1G03890.1 | 23.398 | 359 | 195 | 12 | 23 | 322 | 44 | 381 | 7.31e-16 | 80.5 |
| Msa0068010 | AT1G03880.1 | 21.656 | 314 | 180 | 9 | 30 | 279 | 42 | 353 | 1.71e-13 | 73.2 |
| Msa0068010 | AT5G44120.3 | 20.242 | 331 | 188 | 9 | 31 | 287 | 49 | 377 | 1.95e-11 | 67.0 |
Find 145 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGAAGGTTGTTGCAATTA+AGG | 0.197430 | 1_2:+33517845 | Msa0068010:CDS |
| GGAGAAGGTTGTTGCAATTA+AGG | 0.197430 | 1_2:+33521857 | Msa0068010:CDS |
| CTCTTGTGATTCTGCTTTGC+AGG | 0.207745 | 1_2:+33522334 | Msa0068010:CDS |
| CCTTTCCTGTGTTCATCTTT+AGG | 0.208521 | 1_2:-33518149 | None:intergenic |
| CTCTTGTGATTCTGCTTTGC+AGG | 0.220590 | 1_2:+33518331 | Msa0068010:CDS |
| TGCAGGTTACTTACATTGTT+AGG | 0.243182 | 1_2:+33518348 | Msa0068010:CDS |
| TGCAGGTTACTTACATTGTT+AGG | 0.243182 | 1_2:+33522351 | Msa0068010:CDS |
| GGTCCTAATGGAATCTTTAC+TGG | 0.258702 | 1_2:+33518005 | Msa0068010:CDS |
| CGGAAGAGCTTCTCAACTTC+TGG | 0.259062 | 1_2:-33523125 | None:intergenic |
| ACAACCTTCTCCTCTGATTC+AGG | 0.324463 | 1_2:-33517834 | None:intergenic |
| ACAACCTTCTCCTCTGATTC+AGG | 0.324463 | 1_2:-33521846 | None:intergenic |
| AGCGGACGTGTTCAGGTTGT+TGG | 0.326931 | 1_2:+33522377 | Msa0068010:CDS |
| CTTCCTTTGGTTGGTGAGGT+TGG | 0.336501 | 1_2:+33518254 | Msa0068010:CDS |
| CTTCCTTTGGTTGGTGAGGT+TGG | 0.336501 | 1_2:+33522257 | Msa0068010:CDS |
| AGCGGACGTGTTCAGGTTGT+TGG | 0.349268 | 1_2:+33518374 | Msa0068010:CDS |
| TTGGTTGGTGAGGTTGGTTT+AGG | 0.350208 | 1_2:+33518260 | Msa0068010:CDS |
| TTGGTTGGTGAGGTTGGTTT+AGG | 0.350208 | 1_2:+33522263 | Msa0068010:CDS |
| GAGGTATTCTGATTCTTCTA+AGG | 0.367387 | 1_2:+33517681 | Msa0068010:CDS |
| GGAAGATCCATGTGCTCTCC+TGG | 0.372229 | 1_2:+33522308 | Msa0068010:CDS |
| GCAGAATCACAAGAGAATTC+AGG | 0.374012 | 1_2:-33518323 | None:intergenic |
| CCTGCAGAACTGTAGGTGAT+AGG | 0.376001 | 1_2:-33523085 | None:intergenic |
| AAGGATGCTTATGTTCTTCA+AGG | 0.391433 | 1_2:+33517700 | Msa0068010:CDS |
| AAAGGGATTGTGAAGCTTGA+TGG | 0.403363 | 1_2:+33518107 | Msa0068010:CDS |
| TTCTATATTATATTCTACTT+TGG | 0.403377 | 1_2:-33523185 | None:intergenic |
| CTTTGGAGGAGGGAAGAAAA+TGG | 0.404487 | 1_2:-33523168 | None:intergenic |
| GCTGATCTTGTGAGGATTGA+TGG | 0.405011 | 1_2:+33518284 | Msa0068010:CDS |
| GCTGATCTTGTGAGGATTGA+TGG | 0.405011 | 1_2:+33522287 | Msa0068010:CDS |
| GCAGGTTACTTACATTGTTA+GGG | 0.405546 | 1_2:+33518349 | Msa0068010:CDS |
| GCAGGTTACTTACATTGTTA+GGG | 0.405546 | 1_2:+33522352 | Msa0068010:CDS |
| GATGCTTTAGCACTCCCCTT+TGG | 0.411635 | 1_2:+33517873 | Msa0068010:CDS |
| GATGCTTTAGCACTCCCCTT+TGG | 0.411635 | 1_2:+33521885 | Msa0068010:CDS |
| ACCAACCAAAGGAAGGTTCT+TGG | 0.412307 | 1_2:-33518246 | None:intergenic |
| ACCAACCAAAGGAAGGTTCT+TGG | 0.412307 | 1_2:-33522249 | None:intergenic |
| GAACACCAAGAACCTTCCTT+TGG | 0.413394 | 1_2:+33518241 | Msa0068010:CDS |
| GAACACCAAGAACCTTCCTT+TGG | 0.413394 | 1_2:+33522244 | Msa0068010:CDS |
| AATCCAGTAAAGATTCCATT+AGG | 0.431957 | 1_2:-33518008 | None:intergenic |
| AATCTAGTAAAGATTCCATT+AGG | 0.431957 | 1_2:-33522020 | None:intergenic |
| AGGCATGGCTTTAAACTGTC+TGG | 0.435022 | 1_2:+33518169 | Msa0068010:CDS |
| TATATTATATTCTACTTTGG+AGG | 0.441393 | 1_2:-33523182 | None:intergenic |
| CTGAGTTTGTGGGAAGAGCT+TGG | 0.442265 | 1_2:+33518036 | Msa0068010:CDS |
| TGAGTTTGTGGGAAGAGCTT+GGG | 0.443495 | 1_2:+33518037 | Msa0068010:CDS |
| GAAACGGGTAGTGGAGTTGC+TGG | 0.445310 | 1_2:+33521813 | Msa0068010:intron |
| TACACTTTCTTAGCTGATTG+AGG | 0.448005 | 1_2:-33517544 | None:intergenic |
| ACACATGGCTGGAAGTTCTT+CGG | 0.454286 | 1_2:+33523052 | Msa0068010:intron |
| TGTTGGTGGTAAGAGAGTCT+TGG | 0.455588 | 1_2:+33522394 | Msa0068010:CDS |
| ACCAAGAACCTTCCTTTGGT+TGG | 0.462283 | 1_2:+33518245 | Msa0068010:CDS |
| ACCAAGAACCTTCCTTTGGT+TGG | 0.462283 | 1_2:+33522248 | Msa0068010:CDS |
| CACCATGTCACAACACCAAA+GGG | 0.465835 | 1_2:-33517888 | None:intergenic |
| CACCATGTCACAACACCAAA+GGG | 0.465835 | 1_2:-33521900 | None:intergenic |
| GTTGGAAAGCAGTCCGCTAA+AGG | 0.467995 | 1_2:+33518089 | Msa0068010:CDS |
| TGTGGGAAGAGCTTGGGACT+TGG | 0.468488 | 1_2:+33518043 | Msa0068010:CDS |
| AAACTGTCTGGAGGCACCAT+TGG | 0.469468 | 1_2:+33518181 | Msa0068010:CDS |
| GAAACAGGAAGTGGAGTTGC+TGG | 0.472275 | 1_2:+33517801 | Msa0068010:intron |
| TCCCCTTTGGTGTTGTGACA+TGG | 0.472969 | 1_2:+33517886 | Msa0068010:CDS |
| TCCCCTTTGGTGTTGTGACA+TGG | 0.472969 | 1_2:+33521898 | Msa0068010:CDS |
| GAGTTGGTTGTTCTGTTCCT+CGG | 0.474191 | 1_2:+33517930 | Msa0068010:CDS |
| TTGGAGACAACTTTGAAGGC+TGG | 0.481044 | 1_2:+33522413 | Msa0068010:CDS |
| ATTATATTCTACTTTGGAGG+AGG | 0.482847 | 1_2:-33523179 | None:intergenic |
| GAACCTTCCTTTGGTTGGTG+AGG | 0.484774 | 1_2:+33518250 | Msa0068010:CDS |
| GAACCTTCCTTTGGTTGGTG+AGG | 0.484774 | 1_2:+33522253 | Msa0068010:CDS |
| GGACGTGTTCAGGTTGTTGG+TGG | 0.491970 | 1_2:+33522380 | Msa0068010:CDS |
| AGTCTTGGAGACAACTTTGA+AGG | 0.493036 | 1_2:+33522409 | Msa0068010:CDS |
| TCGAAGATTGCTGACAATGA+TGG | 0.493938 | 1_2:+33522470 | Msa0068010:CDS |
| CCTATCACCTACAGTTCTGC+AGG | 0.500700 | 1_2:+33523085 | Msa0068010:CDS |
| GAGTTGGTTGTTCTATTCCT+CGG | 0.501868 | 1_2:+33521942 | Msa0068010:CDS |
| TTGGAAAGCAGTCCGCTAAA+GGG | 0.505396 | 1_2:+33518090 | Msa0068010:CDS |
| AAGCTTCACAATCCCTTTAG+CGG | 0.508519 | 1_2:-33518102 | None:intergenic |
| CTGCAGAACTGTAGGTGATA+GGG | 0.511631 | 1_2:-33523084 | None:intergenic |
| TGGAAGTTCTTCGGTGTGGA+AGG | 0.515956 | 1_2:+33523061 | Msa0068010:intron |
| GTTCATCTTTAGGCTGAGAA+AGG | 0.516370 | 1_2:-33518139 | None:intergenic |
| AGCTTCCTATGTTGCGTCAA+GGG | 0.519696 | 1_2:+33517608 | Msa0068010:CDS |
| AGCTTCCTATGTTGCGTCAA+GGG | 0.519696 | 1_2:+33521620 | Msa0068010:CDS |
| GAAGGTTGTTGCAATTAAGG+AGG | 0.520312 | 1_2:+33517848 | Msa0068010:CDS |
| GAAGGTTGTTGCAATTAAGG+AGG | 0.520312 | 1_2:+33521860 | Msa0068010:CDS |
| GAGATTTGTTCATTGTGCCA+AGG | 0.529346 | 1_2:+33522435 | Msa0068010:CDS |
| AGATTCCATTAGGACCAGTC+AGG | 0.543055 | 1_2:-33517998 | None:intergenic |
| AGATTCCATTAGGACCAGTC+AGG | 0.543055 | 1_2:-33522010 | None:intergenic |
| AAGAAAGTGTACGGTGGCCA+TGG | 0.543921 | 1_2:+33517556 | Msa0068010:CDS |
| AAGAAAGTGTACGGTGGCCA+TGG | 0.543921 | 1_2:+33521568 | Msa0068010:CDS |
| TTATATTCTACTTTGGAGGA+GGG | 0.549665 | 1_2:-33523178 | None:intergenic |
| ACTTCAAAAGCACACAAAGC+TGG | 0.550550 | 1_2:+33517957 | Msa0068010:CDS |
| ACTTCAAAAGCACACAAAGC+TGG | 0.550550 | 1_2:+33521969 | Msa0068010:CDS |
| ATGGTGGATCATACTATGCT+TGG | 0.555897 | 1_2:+33521587 | Msa0068010:CDS |
| GTTTAGGAGCTGATCTTGTG+AGG | 0.556251 | 1_2:+33518276 | Msa0068010:CDS |
| GTTTAGGAGCTGATCTTGTG+AGG | 0.556251 | 1_2:+33522279 | Msa0068010:CDS |
| ATGGTGGATCGTACTATGCT+TGG | 0.556355 | 1_2:+33517575 | Msa0068010:CDS |
| ATGTTCCCTTGACGCAACAT+AGG | 0.565357 | 1_2:-33517613 | None:intergenic |
| ATGTTCCCTTGACGCAACAT+AGG | 0.565357 | 1_2:-33521625 | None:intergenic |
| AACAATGTGAAGACACTCGT+TGG | 0.569108 | 1_2:+33518071 | Msa0068010:CDS |
| GCAGAATCACAAGAGAATCC+AGG | 0.572154 | 1_2:-33522326 | None:intergenic |
| AGAAGCTCTTCCGTTCAAAG+AGG | 0.572950 | 1_2:+33523135 | Msa0068010:CDS |
| CAATCAGCTAAGAAAGTGTA+CGG | 0.575765 | 1_2:+33517547 | Msa0068010:CDS |
| CAATCAGCTAAGAAAGTGTA+CGG | 0.575765 | 1_2:+33521559 | Msa0068010:intron |
| AGAGAATCCAGGAGAGCACA+TGG | 0.578294 | 1_2:-33522315 | None:intergenic |
| AAGGTTGTTGCAATTAAGGA+GGG | 0.584487 | 1_2:+33517849 | Msa0068010:CDS |
| AAGGTTGTTGCAATTAAGGA+GGG | 0.584487 | 1_2:+33521861 | Msa0068010:CDS |
| CGCAACATAGGAAGCTCAGA+AGG | 0.585364 | 1_2:-33517601 | None:intergenic |
| CGCAACATAGGAAGCTCAGA+AGG | 0.585364 | 1_2:-33521613 | None:intergenic |
| CATCAGCAGTCCTCTTTGAA+CGG | 0.585723 | 1_2:-33523145 | None:intergenic |
| AAAGTGTACGGTGGCCATGG+TGG | 0.590216 | 1_2:+33517559 | Msa0068010:CDS |
| AAAGTGTACGGTGGCCATGG+TGG | 0.590216 | 1_2:+33521571 | Msa0068010:CDS |
| GTTGTTCTGAAGAACTAACT+TGG | 0.590453 | 1_2:-33517644 | None:intergenic |
| GTTGTTCTGAAGAACTAACT+TGG | 0.590453 | 1_2:-33521656 | None:intergenic |
| AGAGAATTCAGGAGAGCACA+TGG | 0.590834 | 1_2:-33518312 | None:intergenic |
| AAAGCAGCCTGCAGAACTGT+AGG | 0.593333 | 1_2:-33523092 | None:intergenic |
| CAGGTTACTTACATTGTTAG+GGG | 0.593840 | 1_2:+33518350 | Msa0068010:CDS |
| CAGGTTACTTACATTGTTAG+GGG | 0.593840 | 1_2:+33522353 | Msa0068010:CDS |
| GCTACCTGAATCAGAGGAGA+AGG | 0.597534 | 1_2:+33517830 | Msa0068010:CDS |
| GCTACCTGAATCAGAGGAGA+AGG | 0.597534 | 1_2:+33521842 | Msa0068010:CDS |
| GATTGCTGACAATGATGGAA+TGG | 0.599379 | 1_2:+33522475 | Msa0068010:CDS |
| GAGCTTCCTATGTTGCGTCA+AGG | 0.607845 | 1_2:+33517607 | Msa0068010:CDS |
| GAGCTTCCTATGTTGCGTCA+AGG | 0.607845 | 1_2:+33521619 | Msa0068010:CDS |
| CCACCATGTCACAACACCAA+AGG | 0.611673 | 1_2:-33517889 | None:intergenic |
| CCACCATGTCACAACACCAA+AGG | 0.611673 | 1_2:-33521901 | None:intergenic |
| CAACAAAGAGGACACTGAGT+TGG | 0.612479 | 1_2:+33517914 | Msa0068010:CDS |
| CAACAAAGAGGACACTGAGT+TGG | 0.612479 | 1_2:+33521926 | Msa0068010:CDS |
| CAACCTCACCAACCAAAGGA+AGG | 0.617830 | 1_2:-33518253 | None:intergenic |
| CAACCTCACCAACCAAAGGA+AGG | 0.617830 | 1_2:-33522256 | None:intergenic |
| AGATGAACACAGGAAAGGCA+TGG | 0.622196 | 1_2:+33518154 | Msa0068010:CDS |
| CTCAGCCTAAAGATGAACAC+AGG | 0.623720 | 1_2:+33518144 | Msa0068010:CDS |
| AGGTTACTTACATTGTTAGG+GGG | 0.633919 | 1_2:+33518351 | Msa0068010:CDS |
| AGGTTACTTACATTGTTAGG+GGG | 0.633919 | 1_2:+33522354 | Msa0068010:CDS |
| AAACCAACCTCACCAACCAA+AGG | 0.641668 | 1_2:-33518257 | None:intergenic |
| AAACCAACCTCACCAACCAA+AGG | 0.641668 | 1_2:-33522260 | None:intergenic |
| TGGCTGGAAGTTCTTCGGTG+TGG | 0.642740 | 1_2:+33523057 | Msa0068010:intron |
| AAGTTAGTTCTTCAGAACAA+CGG | 0.643412 | 1_2:+33517646 | Msa0068010:CDS |
| AAGTTAGTTCTTCAGAACAA+CGG | 0.643412 | 1_2:+33521658 | Msa0068010:CDS |
| CCTAAAGATGAACACAGGAA+AGG | 0.654035 | 1_2:+33518149 | Msa0068010:CDS |
| AATTGTGCTACCTGAATCAG+AGG | 0.656682 | 1_2:+33517824 | Msa0068010:CDS |
| AATTGTGCTACCTGAATCAG+AGG | 0.656682 | 1_2:+33521836 | Msa0068010:CDS |
| ATGTTGCGTCAAGGGAACAT+TGG | 0.658178 | 1_2:+33517616 | Msa0068010:CDS |
| ATGTTGCGTCAAGGGAACAT+TGG | 0.658178 | 1_2:+33521628 | Msa0068010:CDS |
| CATGGCTTTAAACTGTCTGG+AGG | 0.658481 | 1_2:+33518172 | Msa0068010:CDS |
| CCTTTGGTGTTGTGACATGG+TGG | 0.659432 | 1_2:+33517889 | Msa0068010:CDS |
| CCTTTGGTGTTGTGACATGG+TGG | 0.659432 | 1_2:+33521901 | Msa0068010:CDS |
| TTAGAAGAATCAGAATACCT+CGG | 0.662748 | 1_2:-33517679 | None:intergenic |
| GACATGGTGGTACAACAAAG+AGG | 0.672878 | 1_2:+33517902 | Msa0068010:CDS |
| GACATGGTGGTACAACAAAG+AGG | 0.672878 | 1_2:+33521914 | Msa0068010:CDS |
| AAGCATAGTATGATCCACCA+TGG | 0.712691 | 1_2:-33521585 | None:intergenic |
| CTGACAATGATGGAATGGAG+TGG | 0.715524 | 1_2:+33522480 | Msa0068010:CDS |
| AAGCATAGTACGATCCACCA+TGG | 0.721837 | 1_2:-33517573 | None:intergenic |
| ACCATGTCACAACACCAAAG+GGG | 0.723908 | 1_2:-33517887 | None:intergenic |
| ACCATGTCACAACACCAAAG+GGG | 0.723908 | 1_2:-33521899 | None:intergenic |
| TCAGCTAAGAAAGTGTACGG+TGG | 0.762192 | 1_2:+33517550 | Msa0068010:CDS |
| TCAGCTAAGAAAGTGTACGG+TGG | 0.762192 | 1_2:+33521562 | Msa0068010:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAAATTGATTGAATA+TGG | - | chr1_2:33518596-33518615 | None:intergenic | 10.0% |
| !! | ATTATTATTAGAATTCTTAA+TGG | + | chr1_2:33521778-33521797 | Msa0068010:intron | 10.0% |
| !!! | GATTTGATGATAATTATTAT+TGG | + | chr1_2:33517754-33517773 | Msa0068010:intron | 15.0% |
| !! | ATTATTATTGGAATTCTTAA+TGG | + | chr1_2:33517766-33517785 | Msa0068010:intron | 15.0% |
| !!! | AACTTCAATTATTTTGAAAA+TGG | + | chr1_2:33518832-33518851 | Msa0068010:intron | 15.0% |
| !! | ATATATATGTATATATGATG+TGG | + | chr1_2:33519766-33519785 | Msa0068010:intron | 15.0% |
| !!! | TATTATTGGTTTTTTTTACA+GGG | + | chr1_2:33520918-33520937 | Msa0068010:intron | 15.0% |
| !!! | TTTTTAATATCAACATCCAA+TGG | - | chr1_2:33518200-33518219 | None:intergenic | 20.0% |
| !! | TTGGATGTTGATATTAAAAA+TGG | + | chr1_2:33518200-33518219 | Msa0068010:CDS | 20.0% |
| !! | TAAATTGATTGAATATGGTT+AGG | - | chr1_2:33518591-33518610 | None:intergenic | 20.0% |
| !!! | TGGTTTTATAAGATTAAATG+AGG | + | chr1_2:33518923-33518942 | Msa0068010:intron | 20.0% |
| !! | ATTTCTCACAATTCATTTAA+TGG | - | chr1_2:33519008-33519027 | None:intergenic | 20.0% |
| !!! | TTTTATCGCTTAATATAAGT+AGG | + | chr1_2:33520489-33520508 | Msa0068010:intron | 20.0% |
| !! | TTTATCGCTTAATATAAGTA+GGG | + | chr1_2:33520490-33520509 | Msa0068010:intron | 20.0% |
| !!! | CTATTATTGGTTTTTTTTAC+AGG | + | chr1_2:33520917-33520936 | Msa0068010:intron | 20.0% |
| !!! | ATTATTGGTTTTTTTTACAG+GGG | + | chr1_2:33520919-33520938 | Msa0068010:intron | 20.0% |
| !!! | AATCAACTTTTTTTTTGTAG+TGG | - | chr1_2:33521120-33521139 | None:intergenic | 20.0% |
| !! | ATCTAATGATAGTAAGTAAA+GGG | - | chr1_2:33521333-33521352 | None:intergenic | 20.0% |
| !!! | TTTTAAATATCAACATCCAA+TGG | - | chr1_2:33522202-33522221 | None:intergenic | 20.0% |
| !! | TGGATGTTGATATTTAAAAA+TGG | + | chr1_2:33522203-33522222 | Msa0068010:intron | 20.0% |
| !! | ATGTTGATATTTAAAAATGG+TGG | + | chr1_2:33522206-33522225 | Msa0068010:intron | 20.0% |
| !! | AATGCATATATAACAACAAA+AGG | - | chr1_2:33522572-33522591 | None:intergenic | 20.0% |
| !! | TAAATGTAATTAAGTACATG+CGG | - | chr1_2:33522706-33522725 | None:intergenic | 20.0% |
| !! | TCAACATATTATACTTACTA+TGG | + | chr1_2:33522996-33523015 | Msa0068010:intron | 20.0% |
| ! | GATGTTGATATTAAAAATGG+TGG | + | chr1_2:33518203-33518222 | Msa0068010:CDS | 25.0% |
| !! | TTGATATTAAAAATGGTGGA+AGG | + | chr1_2:33518207-33518226 | Msa0068010:CDS | 25.0% |
| !! | TGATATTAAAAATGGTGGAA+GGG | + | chr1_2:33518208-33518227 | Msa0068010:CDS | 25.0% |
| ! | GACAACATAGAATAAAAACT+TGG | + | chr1_2:33518421-33518440 | Msa0068010:intron | 25.0% |
| ! | ACATAGAATAAAAACTTGGA+AGG | + | chr1_2:33518425-33518444 | Msa0068010:intron | 25.0% |
| !!! | GTTTTGTTTTGGAAATGAAT+TGG | + | chr1_2:33518652-33518671 | Msa0068010:intron | 25.0% |
| ! | TGAAAGATTTATAAGGCAAT+TGG | - | chr1_2:33518899-33518918 | None:intergenic | 25.0% |
| ! | CCATTCATGAAAGATTTATA+AGG | - | chr1_2:33518906-33518925 | None:intergenic | 25.0% |
| ! | CCTTATAAATCTTTCATGAA+TGG | + | chr1_2:33518903-33518922 | Msa0068010:intron | 25.0% |
| ! | ATGAATTGTGAGAAATTGTA+TGG | + | chr1_2:33519012-33519031 | Msa0068010:intron | 25.0% |
| !! | AATTATGATGATGATGTTGA+TGG | + | chr1_2:33519079-33519098 | Msa0068010:intron | 25.0% |
| !!! | TGATTATGTTGATGATAATG+TGG | + | chr1_2:33519152-33519171 | Msa0068010:intron | 25.0% |
| ! | GTCATATGTTGAAATGTAAA+AGG | + | chr1_2:33519357-33519376 | Msa0068010:intron | 25.0% |
| ! | AATGTTATGATTATGTGGAT+TGG | + | chr1_2:33519592-33519611 | Msa0068010:intron | 25.0% |
| ! | TAAACAAACATAGACATTCA+AGG | - | chr1_2:33520069-33520088 | None:intergenic | 25.0% |
| !! | TATATGTATGCGTATTGTTT+TGG | + | chr1_2:33520413-33520432 | Msa0068010:intron | 25.0% |
| ! | GGTACAAGATAATAAATAGT+GGG | - | chr1_2:33520775-33520794 | None:intergenic | 25.0% |
| ! | AGGTACAAGATAATAAATAG+TGG | - | chr1_2:33520776-33520795 | None:intergenic | 25.0% |
| ! | TGATGCAAATCTACTATTAT+TGG | + | chr1_2:33520904-33520923 | Msa0068010:intron | 25.0% |
| !!! | TTATTGGTTTTTTTTACAGG+GGG | + | chr1_2:33520920-33520939 | Msa0068010:intron | 25.0% |
| ! | GAGATACTCGTAAAAAAAAA+GGG | - | chr1_2:33520990-33521009 | None:intergenic | 25.0% |
| ! | GGTGAATTTAAATTTGGATT+AGG | - | chr1_2:33521311-33521330 | None:intergenic | 25.0% |
| ! | TAAAGGGGTGAATTTAAATT+TGG | - | chr1_2:33521317-33521336 | None:intergenic | 25.0% |
| ! | TCTAATGATAGTAAGTAAAG+GGG | - | chr1_2:33521332-33521351 | None:intergenic | 25.0% |
| ! | CATCTAATGATAGTAAGTAA+AGG | - | chr1_2:33521334-33521353 | None:intergenic | 25.0% |
| !!! | TTTACTAATTTTTTCCTGAC+TGG | + | chr1_2:33521996-33522015 | Msa0068010:CDS | 25.0% |
| ! | AATCTAGTAAAGATTCCATT+AGG | - | chr1_2:33522023-33522042 | None:intergenic | 25.0% |
| !! | TGATATTTAAAAATGGTGGA+AGG | + | chr1_2:33522210-33522229 | Msa0068010:intron | 25.0% |
| !! | GATATTTAAAAATGGTGGAA+GGG | + | chr1_2:33522211-33522230 | Msa0068010:intron | 25.0% |
| ! | AGTTAAGAAAAACTCACTTA+GGG | - | chr1_2:33522523-33522542 | None:intergenic | 25.0% |
| ! | AAGTTAAGAAAAACTCACTT+AGG | - | chr1_2:33522524-33522543 | None:intergenic | 25.0% |
| ! | TGTACTTAATTACATTTACC+AGG | + | chr1_2:33522708-33522727 | Msa0068010:intron | 25.0% |
| ! | CTTATTTCCATAAACTCTAA+AGG | + | chr1_2:33522864-33522883 | Msa0068010:intron | 25.0% |
| !!! | AAACTATCCTTTAGAGTTTA+TGG | - | chr1_2:33522874-33522893 | None:intergenic | 25.0% |
| ! | AAGTTAGTTCTTCAGAACAA+CGG | + | chr1_2:33517646-33517665 | Msa0068010:CDS | 30.0% |
| TTAGAAGAATCAGAATACCT+CGG | - | chr1_2:33517682-33517701 | None:intergenic | 30.0% | |
| !!! | TTTACTGATTTTTTCCTGAC+TGG | + | chr1_2:33517984-33518003 | Msa0068010:CDS | 30.0% |
| AATCCAGTAAAGATTCCATT+AGG | - | chr1_2:33518011-33518030 | None:intergenic | 30.0% | |
| !!! | GATCTAACTTGGTTTTGTTT+TGG | + | chr1_2:33518641-33518660 | Msa0068010:intron | 30.0% |
| TACACTTATATGTAGCCTAA+AGG | + | chr1_2:33518761-33518780 | Msa0068010:intron | 30.0% | |
| ! | TTATAAGGCAATTGGTTCAA+AGG | - | chr1_2:33518891-33518910 | None:intergenic | 30.0% |
| !! | ATTGTGATTTGTTGAATGTG+TGG | + | chr1_2:33519192-33519211 | Msa0068010:intron | 30.0% |
| ATGTTGAAGTTGTGCATTAT+CGG | + | chr1_2:33519298-33519317 | Msa0068010:intron | 30.0% | |
| ACTCAATATGATATGATGCA+TGG | - | chr1_2:33519339-33519358 | None:intergenic | 30.0% | |
| TTACAGAGTTGAATTGTAAG+AGG | + | chr1_2:33519390-33519409 | Msa0068010:intron | 30.0% | |
| GATAATAATGTGATAGCTTG+AGG | + | chr1_2:33519965-33519984 | Msa0068010:intron | 30.0% | |
| ! | TTGACCATGGCATATATTTT+TGG | + | chr1_2:33520349-33520368 | Msa0068010:intron | 30.0% |
| ATCTCCAAAAATATATGCCA+TGG | - | chr1_2:33520356-33520375 | None:intergenic | 30.0% | |
| !!! | TGCGTATTGTTTTGGATTTT+TGG | + | chr1_2:33520421-33520440 | Msa0068010:intron | 30.0% |
| TCACTTAGACATTGTAAACA+TGG | - | chr1_2:33520536-33520555 | None:intergenic | 30.0% | |
| ! | ATAATAAATAGTGGGACTAG+CGG | - | chr1_2:33520767-33520786 | None:intergenic | 30.0% |
| ACAAGAGAGTTTATACAATG+AGG | - | chr1_2:33520796-33520815 | None:intergenic | 30.0% | |
| CGAGATACTCGTAAAAAAAA+AGG | - | chr1_2:33520991-33521010 | None:intergenic | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | + | chr1_2:33521075-33521094 | Msa0068010:intron | 30.0% | |
| !!! | AACTTTTTTTTTGTAGTGGC+CGG | - | chr1_2:33521116-33521135 | None:intergenic | 30.0% |
| !!! | TGATAACGAGTTTTAAGTAG+CGG | + | chr1_2:33521352-33521371 | Msa0068010:intron | 30.0% |
| !! | ATGTGGTTTGGTGTATTTAT+AGG | - | chr1_2:33521431-33521450 | None:intergenic | 30.0% |
| ACACGAAAAAACAAAGCAAA+GGG | - | chr1_2:33521492-33521511 | None:intergenic | 30.0% | |
| ! | AAGTTAGTTCTTCAGAACAA+CGG | + | chr1_2:33517646-33517665 | Msa0068010:CDS | 30.0% |
| ! | TAGATTTTCAACTGAGTTTG+TGG | + | chr1_2:33522037-33522056 | Msa0068010:CDS | 30.0% |
| ! | AGATTTTCAACTGAGTTTGT+GGG | + | chr1_2:33522038-33522057 | Msa0068010:CDS | 30.0% |
| GTTAAGAAAAACTCACTTAG+GGG | - | chr1_2:33522522-33522541 | None:intergenic | 30.0% | |
| TCCTCAAAGAAACACAAATT+CGG | - | chr1_2:33522641-33522660 | None:intergenic | 30.0% | |
| CTTAATTACATTTACCAGGA+AGG | + | chr1_2:33522712-33522731 | Msa0068010:intron | 30.0% | |
| ATTAATTGTTCAATCCTTCC+TGG | - | chr1_2:33522729-33522748 | None:intergenic | 30.0% | |
| ATTAGCATACAATGTCTGTT+TGG | + | chr1_2:33522753-33522772 | Msa0068010:intron | 30.0% | |
| ! | TAAGTATTTGTGAAGCACTT+TGG | + | chr1_2:33522805-33522824 | Msa0068010:intron | 30.0% |
| AATAAGCTGAAAACAGTTTG+AGG | - | chr1_2:33522850-33522869 | None:intergenic | 30.0% | |
| ACGCGAAAAAACATAGCAAA+GGG | - | chr1_2:33517515-33517534 | None:intergenic | 35.0% | |
| TACACTTTCTTAGCTGATTG+AGG | - | chr1_2:33517547-33517566 | None:intergenic | 35.0% | |
| ! | CAATCAGCTAAGAAAGTGTA+CGG | + | chr1_2:33517547-33517566 | Msa0068010:CDS | 35.0% |
| !! | GTTGTTCTGAAGAACTAACT+TGG | - | chr1_2:33517647-33517666 | None:intergenic | 35.0% |
| ! | GAGGTATTCTGATTCTTCTA+AGG | + | chr1_2:33517681-33517700 | Msa0068010:CDS | 35.0% |
| AAGGATGCTTATGTTCTTCA+AGG | + | chr1_2:33517700-33517719 | Msa0068010:CDS | 35.0% | |
| !! | TGGTGATGATTTGTTGAAAC+AGG | + | chr1_2:33517786-33517805 | Msa0068010:intron | 35.0% |
| !! | TGATTTGTTGAAACAGGAAG+TGG | + | chr1_2:33517792-33517811 | Msa0068010:intron | 35.0% |
| AAGGTTGTTGCAATTAAGGA+GGG | + | chr1_2:33517849-33517868 | Msa0068010:CDS | 35.0% | |
| ! | TGGATTTTCAACTGAGTTTG+TGG | + | chr1_2:33518025-33518044 | Msa0068010:CDS | 35.0% |
| ! | GGATTTTCAACTGAGTTTGT+GGG | + | chr1_2:33518026-33518045 | Msa0068010:CDS | 35.0% |
| TGCAGGTTACTTACATTGTT+AGG | + | chr1_2:33518348-33518367 | Msa0068010:CDS | 35.0% | |
| GCAGGTTACTTACATTGTTA+GGG | + | chr1_2:33518349-33518368 | Msa0068010:CDS | 35.0% | |
| CAGGTTACTTACATTGTTAG+GGG | + | chr1_2:33518350-33518369 | Msa0068010:CDS | 35.0% | |
| AGGTTACTTACATTGTTAGG+GGG | + | chr1_2:33518351-33518370 | Msa0068010:CDS | 35.0% | |
| !!! | TGTTGATGGTAAGAGAGTTT+TGG | + | chr1_2:33518397-33518416 | Msa0068010:intron | 35.0% |
| ! | AAAACTTGGAAGGTATGAGT+TGG | + | chr1_2:33518435-33518454 | Msa0068010:intron | 35.0% |
| ! | TGTACTTTTAAGCATGCCAA+TGG | + | chr1_2:33518555-33518574 | Msa0068010:intron | 35.0% |
| ! | GTTAGGTGTTTGAAATCCAT+TGG | - | chr1_2:33518574-33518593 | None:intergenic | 35.0% |
| !! | CTTCTAAGAGTATCATAGCT+TGG | + | chr1_2:33518619-33518638 | Msa0068010:intron | 35.0% |
| ATCATAGCTTGGATCTAACT+TGG | + | chr1_2:33518630-33518649 | Msa0068010:intron | 35.0% | |
| ATGATTTCTTCGTGTTTAGC+CGG | + | chr1_2:33518715-33518734 | Msa0068010:intron | 35.0% | |
| AAGTGTAGTAGAGTATACCT+TGG | - | chr1_2:33518748-33518767 | None:intergenic | 35.0% | |
| CCTCAACTAAGTATACCTTT+AGG | - | chr1_2:33518779-33518798 | None:intergenic | 35.0% | |
| ! | CCTAAAGGTATACTTAGTTG+AGG | + | chr1_2:33518776-33518795 | Msa0068010:intron | 35.0% |
| !! | GGATCTTGTTTACTTGGTTT+TGG | + | chr1_2:33518803-33518822 | Msa0068010:intron | 35.0% |
| TAGACGAACTTGGTTGAAAA+TGG | + | chr1_2:33518863-33518882 | Msa0068010:intron | 35.0% | |
| AGGATATGTGAGTGATTGTT+AGG | + | chr1_2:33518943-33518962 | Msa0068010:intron | 35.0% | |
| GTTGAGCTAGTCAATGTAAT+TGG | + | chr1_2:33519242-33519261 | Msa0068010:intron | 35.0% | |
| ! | GTGTACTTTTACATTGTCGT+TGG | + | chr1_2:33519267-33519286 | Msa0068010:intron | 35.0% |
| TGTTGAAGTTGTGCATTATC+GGG | + | chr1_2:33519299-33519318 | Msa0068010:intron | 35.0% | |
| TCTTACATATGATGTGCAGT+TGG | + | chr1_2:33519421-33519440 | Msa0068010:intron | 35.0% | |
| GACTTGATGAATTTGTGCAT+TGG | + | chr1_2:33519557-33519576 | Msa0068010:intron | 35.0% | |
| TTGATGAATTTGTGCATTGG+TGG | + | chr1_2:33519560-33519579 | Msa0068010:intron | 35.0% | |
| ! | ATTTGTGCATTGGTGGAATT+CGG | + | chr1_2:33519567-33519586 | Msa0068010:intron | 35.0% |
| CGGTGAATGTTATGATTATG+TGG | + | chr1_2:33519587-33519606 | Msa0068010:intron | 35.0% | |
| ! | GGATTGGTGTATATGTACAT+TGG | + | chr1_2:33519608-33519627 | Msa0068010:intron | 35.0% |
| TTGGTGTATATGTACATTGG+TGG | + | chr1_2:33519611-33519630 | Msa0068010:intron | 35.0% | |
| !!! | ACATTGGTGGATTTTGTTGA+CGG | + | chr1_2:33519624-33519643 | Msa0068010:intron | 35.0% |
| CTTGTTTGTGCTTATACACT+TGG | + | chr1_2:33519685-33519704 | Msa0068010:intron | 35.0% | |
| TCATGTGATGCTAGTATTCT+AGG | + | chr1_2:33520010-33520029 | Msa0068010:intron | 35.0% | |
| ! | GTCGTGTCTTTTTATGTTGT+TGG | + | chr1_2:33520255-33520274 | Msa0068010:intron | 35.0% |
| !!! | GTGATGTTGTATTTTGACCA+TGG | + | chr1_2:33520336-33520355 | Msa0068010:intron | 35.0% |
| AATAATCTCATCAGTCACAG+CGG | - | chr1_2:33520392-33520411 | None:intergenic | 35.0% | |
| GTAAACATGGAATAAACCCA+AGG | - | chr1_2:33520523-33520542 | None:intergenic | 35.0% | |
| !! | AACTCTAAGATCGAGTTCAA+CGG | + | chr1_2:33520692-33520711 | Msa0068010:intron | 35.0% |
| TTAATGCGGCAACTTAACAA+TGG | - | chr1_2:33520744-33520763 | None:intergenic | 35.0% | |
| !!! | TTTTTTTACAGGGGGAAAAC+CGG | + | chr1_2:33520928-33520947 | Msa0068010:intron | 35.0% |
| !!! | ACTTTTTTTTTGTAGTGGCC+GGG | - | chr1_2:33521115-33521134 | None:intergenic | 35.0% |
| CACACGAAAAAACAAAGCAA+AGG | - | chr1_2:33521493-33521512 | None:intergenic | 35.0% | |
| TACACTTTCTTAGCTGATTG+AGG | - | chr1_2:33517547-33517566 | None:intergenic | 35.0% | |
| ! | CAATCAGCTAAGAAAGTGTA+CGG | + | chr1_2:33517547-33517566 | Msa0068010:CDS | 35.0% |
| !! | GTTGTTCTGAAGAACTAACT+TGG | - | chr1_2:33517647-33517666 | None:intergenic | 35.0% |
| ! | GAGGTATTCTGATTCTTCTA+AGG | + | chr1_2:33517681-33517700 | Msa0068010:CDS | 35.0% |
| AAGGTTGCTTATGTTCTTCA+AGG | + | chr1_2:33521712-33521731 | Msa0068010:intron | 35.0% | |
| ! | ATGGTGATGATTTGTCGAAA+CGG | + | chr1_2:33521797-33521816 | Msa0068010:intron | 35.0% |
| AAGGTTGTTGCAATTAAGGA+GGG | + | chr1_2:33517849-33517868 | Msa0068010:CDS | 35.0% | |
| TGCAGGTTACTTACATTGTT+AGG | + | chr1_2:33518348-33518367 | Msa0068010:CDS | 35.0% | |
| GCAGGTTACTTACATTGTTA+GGG | + | chr1_2:33518349-33518368 | Msa0068010:CDS | 35.0% | |
| CAGGTTACTTACATTGTTAG+GGG | + | chr1_2:33518350-33518369 | Msa0068010:CDS | 35.0% | |
| AGGTTACTTACATTGTTAGG+GGG | + | chr1_2:33518351-33518370 | Msa0068010:CDS | 35.0% | |
| CCTCAAAGAAACACAAATTC+GGG | - | chr1_2:33522640-33522659 | None:intergenic | 35.0% | |
| TTTGGAAGAGCTTATGAAAC+AGG | + | chr1_2:33522823-33522842 | Msa0068010:intron | 35.0% | |
| CACGCGAAAAAACATAGCAA+AGG | - | chr1_2:33517516-33517535 | None:intergenic | 40.0% | |
| AATTGTGCTACCTGAATCAG+AGG | + | chr1_2:33517824-33517843 | Msa0068010:CDS | 40.0% | |
| GGAGAAGGTTGTTGCAATTA+AGG | + | chr1_2:33517845-33517864 | Msa0068010:CDS | 40.0% | |
| GAAGGTTGTTGCAATTAAGG+AGG | + | chr1_2:33517848-33517867 | Msa0068010:CDS | 40.0% | |
| ! | ACTTCAAAAGCACACAAAGC+TGG | + | chr1_2:33517957-33517976 | Msa0068010:CDS | 40.0% |
| !! | TTTTTCCTGACTGGTCCTAA+TGG | + | chr1_2:33517993-33518012 | Msa0068010:CDS | 40.0% |
| GGTCCTAATGGAATCTTTAC+TGG | + | chr1_2:33518005-33518024 | Msa0068010:CDS | 40.0% | |
| AACAATGTGAAGACACTCGT+TGG | + | chr1_2:33518071-33518090 | Msa0068010:CDS | 40.0% | |
| AAGCTTCACAATCCCTTTAG+CGG | - | chr1_2:33518105-33518124 | None:intergenic | 40.0% | |
| AAAGGGATTGTGAAGCTTGA+TGG | + | chr1_2:33518107-33518126 | Msa0068010:CDS | 40.0% | |
| GTTCATCTTTAGGCTGAGAA+AGG | - | chr1_2:33518142-33518161 | None:intergenic | 40.0% | |
| CCTTTCCTGTGTTCATCTTT+AGG | - | chr1_2:33518152-33518171 | None:intergenic | 40.0% | |
| CCTAAAGATGAACACAGGAA+AGG | + | chr1_2:33518149-33518168 | Msa0068010:CDS | 40.0% | |
| GCAGAATCACAAGAGAATTC+AGG | - | chr1_2:33518326-33518345 | None:intergenic | 40.0% | |
| ! | ACGCGAAAGAACAAGGTTTT+GGG | - | chr1_2:33518530-33518549 | None:intergenic | 40.0% |
| ! | AACGCGAAAGAACAAGGTTT+TGG | - | chr1_2:33518531-33518550 | None:intergenic | 40.0% |
| CACAAAAACGCGAAAGAACA+AGG | - | chr1_2:33518537-33518556 | None:intergenic | 40.0% | |
| GGTATACTTAGTTGAGGCAT+TGG | + | chr1_2:33518782-33518801 | Msa0068010:intron | 40.0% | |
| ! | GGCATTGGATCTTGTTTACT+TGG | + | chr1_2:33518797-33518816 | Msa0068010:intron | 40.0% |
| GGTAGTAAGATAGACGAACT+TGG | + | chr1_2:33518853-33518872 | Msa0068010:intron | 40.0% | |
| GAGCTAGTCAATGTAATTGG+AGG | + | chr1_2:33519245-33519264 | Msa0068010:intron | 40.0% | |
| CAGAGTTGAATTGTAAGAGG+AGG | + | chr1_2:33519393-33519412 | Msa0068010:intron | 40.0% | |
| TAGACTCTTCTAGATGCATG+TGG | - | chr1_2:33519485-33519504 | None:intergenic | 40.0% | |
| AGAATGCTAGATGAGTAACG+AGG | + | chr1_2:33519855-33519874 | Msa0068010:intron | 40.0% | |
| ATAGCTTGAGGTGCAAGTAA+TGG | + | chr1_2:33519977-33519996 | Msa0068010:intron | 40.0% | |
| ! | GTGATGCTAGTATTCTAGGA+AGG | + | chr1_2:33520014-33520033 | Msa0068010:intron | 40.0% |
| ! | TGCTAGTATTCTAGGAAGGA+TGG | + | chr1_2:33520018-33520037 | Msa0068010:intron | 40.0% |
| TAATGTAAAGCTTACCCCTG+TGG | + | chr1_2:33520103-33520122 | Msa0068010:intron | 40.0% | |
| ! | CTGCTATCATTTAGAGTCGT+AGG | + | chr1_2:33520213-33520232 | Msa0068010:intron | 40.0% |
| CGTAGGTTTAGACTCTGATT+AGG | + | chr1_2:33520230-33520249 | Msa0068010:intron | 40.0% | |
| AGGTTTAGACTCTGATTAGG+TGG | + | chr1_2:33520233-33520252 | Msa0068010:intron | 40.0% | |
| TTGATATTTGCCCACTTGAC+AGG | + | chr1_2:33520296-33520315 | Msa0068010:intron | 40.0% | |
| TGATATTTGCCCACTTGACA+GGG | + | chr1_2:33520297-33520316 | Msa0068010:intron | 40.0% | |
| !! | CAGGTTGATGTTACAGACTT+TGG | + | chr1_2:33520623-33520642 | Msa0068010:intron | 40.0% |
| GACAAGTAATTTCAGCATGC+CGG | + | chr1_2:33520645-33520664 | Msa0068010:intron | 40.0% | |
| AGTGTGTGTTGAAAAGACTC+CGG | - | chr1_2:33520667-33520686 | None:intergenic | 40.0% | |
| !! | ACTCTAAGATCGAGTTCAAC+GGG | + | chr1_2:33520693-33520712 | Msa0068010:intron | 40.0% |
| GTCTTTACCCCCTGTAATTT+GGG | - | chr1_2:33520960-33520979 | None:intergenic | 40.0% | |
| TGTCTTTACCCCCTGTAATT+TGG | - | chr1_2:33520961-33520980 | None:intergenic | 40.0% | |
| TCTCGTAAGCTTGTACACTT+AGG | + | chr1_2:33521006-33521025 | Msa0068010:intron | 40.0% | |
| CTCGTAAGCTTGTACACTTA+GGG | + | chr1_2:33521007-33521026 | Msa0068010:intron | 40.0% | |
| AAAACGTAGCTTAGCTCAGT+TGG | + | chr1_2:33521049-33521068 | Msa0068010:intron | 40.0% | |
| CATAAAATATGCAAGGTCCG+TGG | + | chr1_2:33521082-33521101 | Msa0068010:intron | 40.0% | |
| !!! | CTTTTTTTTTGTAGTGGCCG+GGG | - | chr1_2:33521114-33521133 | None:intergenic | 40.0% |
| ! | TTCGTGTGATCGTTCGATTT+TGG | + | chr1_2:33521505-33521524 | Msa0068010:intron | 40.0% |
| AAGCATAGTATGATCCACCA+TGG | - | chr1_2:33521588-33521607 | None:intergenic | 40.0% | |
| !! | ATGGTGGATCATACTATGCT+TGG | + | chr1_2:33521587-33521606 | Msa0068010:CDS | 40.0% |
| ! | TGGTGATGATTTGTCGAAAC+GGG | + | chr1_2:33521798-33521817 | Msa0068010:intron | 40.0% |
| AATTGTGCTACCTGAATCAG+AGG | + | chr1_2:33517824-33517843 | Msa0068010:CDS | 40.0% | |
| GGAGAAGGTTGTTGCAATTA+AGG | + | chr1_2:33517845-33517864 | Msa0068010:CDS | 40.0% | |
| GAAGGTTGTTGCAATTAAGG+AGG | + | chr1_2:33517848-33517867 | Msa0068010:CDS | 40.0% | |
| ! | GAGTTGGTTGTTCTATTCCT+CGG | + | chr1_2:33521942-33521961 | Msa0068010:CDS | 40.0% |
| ! | ACTTCAAAAGCACACAAAGC+TGG | + | chr1_2:33517957-33517976 | Msa0068010:CDS | 40.0% |
| !! | TTTTTCCTGACTGGTCCTAA+TGG | + | chr1_2:33517993-33518012 | Msa0068010:CDS | 40.0% |
| AACAATGTGAAGACACTCGT+TGG | + | chr1_2:33518071-33518090 | Msa0068010:CDS | 40.0% | |
| AAGCTTCACAATCCCTTTAG+CGG | - | chr1_2:33518105-33518124 | None:intergenic | 40.0% | |
| AAAGGGATTGTGAAGCTTGA+CGG | + | chr1_2:33518107-33518126 | Msa0068010:CDS | 40.0% | |
| CCTTTCCTGTGTTCATCTTT+AGG | - | chr1_2:33518152-33518171 | None:intergenic | 40.0% | |
| CCTAAAGATGAACACAGGAA+AGG | + | chr1_2:33518149-33518168 | Msa0068010:CDS | 40.0% | |
| AGTCTTGGAGACAACTTTGA+AGG | + | chr1_2:33522409-33522428 | Msa0068010:CDS | 40.0% | |
| ! | GAGATTTGTTCATTGTGCCA+AGG | + | chr1_2:33522435-33522454 | Msa0068010:CDS | 40.0% |
| ! | GATTGCTGACAATGATGGAA+TGG | + | chr1_2:33522475-33522494 | Msa0068010:CDS | 40.0% |
| CCCGAATTTGTGTTTCTTTG+AGG | + | chr1_2:33522637-33522656 | Msa0068010:intron | 40.0% | |
| CAGTCCTGTATTTACACACA+TGG | + | chr1_2:33523037-33523056 | Msa0068010:intron | 40.0% | |
| ! | TCAGCTAAGAAAGTGTACGG+TGG | + | chr1_2:33517550-33517569 | Msa0068010:CDS | 45.0% |
| AAGCATAGTACGATCCACCA+TGG | - | chr1_2:33517576-33517595 | None:intergenic | 45.0% | |
| !! | ATGGTGGATCGTACTATGCT+TGG | + | chr1_2:33517575-33517594 | Msa0068010:CDS | 45.0% |
| AGCTTCCTATGTTGCGTCAA+GGG | + | chr1_2:33517608-33517627 | Msa0068010:CDS | 45.0% | |
| ATGTTCCCTTGACGCAACAT+AGG | - | chr1_2:33517616-33517635 | None:intergenic | 45.0% | |
| ATGTTGCGTCAAGGGAACAT+TGG | + | chr1_2:33517616-33517635 | Msa0068010:CDS | 45.0% | |
| ACAACCTTCTCCTCTGATTC+AGG | - | chr1_2:33517837-33517856 | None:intergenic | 45.0% | |
| ACCATGTCACAACACCAAAG+GGG | - | chr1_2:33517890-33517909 | None:intergenic | 45.0% | |
| CACCATGTCACAACACCAAA+GGG | - | chr1_2:33517891-33517910 | None:intergenic | 45.0% | |
| GACATGGTGGTACAACAAAG+AGG | + | chr1_2:33517902-33517921 | Msa0068010:CDS | 45.0% | |
| CAACAAAGAGGACACTGAGT+TGG | + | chr1_2:33517914-33517933 | Msa0068010:CDS | 45.0% | |
| ! | GAGTTGGTTGTTCTGTTCCT+CGG | + | chr1_2:33517930-33517949 | Msa0068010:CDS | 45.0% |
| AGATTCCATTAGGACCAGTC+AGG | - | chr1_2:33518001-33518020 | None:intergenic | 45.0% | |
| TGAGTTTGTGGGAAGAGCTT+GGG | + | chr1_2:33518037-33518056 | Msa0068010:CDS | 45.0% | |
| TTGGAAAGCAGTCCGCTAAA+GGG | + | chr1_2:33518090-33518109 | Msa0068010:CDS | 45.0% | |
| CTCAGCCTAAAGATGAACAC+AGG | + | chr1_2:33518144-33518163 | Msa0068010:CDS | 45.0% | |
| AGATGAACACAGGAAAGGCA+TGG | + | chr1_2:33518154-33518173 | Msa0068010:CDS | 45.0% | |
| !! | AGGCATGGCTTTAAACTGTC+TGG | + | chr1_2:33518169-33518188 | Msa0068010:CDS | 45.0% |
| !! | CATGGCTTTAAACTGTCTGG+AGG | + | chr1_2:33518172-33518191 | Msa0068010:CDS | 45.0% |
| GAACACCAAGAACCTTCCTT+TGG | + | chr1_2:33518241-33518260 | Msa0068010:CDS | 45.0% | |
| ACCAAGAACCTTCCTTTGGT+TGG | + | chr1_2:33518245-33518264 | Msa0068010:CDS | 45.0% | |
| ACCAACCAAAGGAAGGTTCT+TGG | - | chr1_2:33518249-33518268 | None:intergenic | 45.0% | |
| AAACCAACCTCACCAACCAA+AGG | - | chr1_2:33518260-33518279 | None:intergenic | 45.0% | |
| !! | TTGGTTGGTGAGGTTGGTTT+AGG | + | chr1_2:33518260-33518279 | Msa0068010:CDS | 45.0% |
| GTTTAGGAGCTGATCTTGTG+AGG | + | chr1_2:33518276-33518295 | Msa0068010:CDS | 45.0% | |
| GCTGATCTTGTGAGGATTGA+TGG | + | chr1_2:33518284-33518303 | Msa0068010:CDS | 45.0% | |
| ! | AGAGAATTCAGGAGAGCACA+TGG | - | chr1_2:33518315-33518334 | None:intergenic | 45.0% |
| CTCTTGTGATTCTGCTTTGC+AGG | + | chr1_2:33518331-33518350 | Msa0068010:CDS | 45.0% | |
| ACTTACATTGTTAGGGGGAG+CGG | + | chr1_2:33518356-33518375 | Msa0068010:CDS | 45.0% | |
| !! | GTTCAGGTTGTTGGTGTTGA+TGG | + | chr1_2:33518383-33518402 | Msa0068010:intron | 45.0% |
| TTGGTCAGAGTCTCCTGTAA+GGG | + | chr1_2:33518454-33518473 | Msa0068010:intron | 45.0% | |
| AGTATACCTTGGCGTTTCAC+CGG | - | chr1_2:33518737-33518756 | None:intergenic | 45.0% | |
| ATGATGTGCAGTTGGCATCA+TGG | + | chr1_2:33519429-33519448 | Msa0068010:intron | 45.0% | |
| TGATGTGCAGTTGGCATCAT+GGG | + | chr1_2:33519430-33519449 | Msa0068010:intron | 45.0% | |
| ACTCATCCATACAGACAGGT+AGG | - | chr1_2:33520138-33520157 | None:intergenic | 45.0% | |
| GTCTACTCATCCATACAGAC+AGG | - | chr1_2:33520142-33520161 | None:intergenic | 45.0% | |
| ! | TAGTTGCTTTGGTGAGTGCT+TGG | + | chr1_2:33520174-33520193 | Msa0068010:intron | 45.0% |
| ! | ATAAGTAGGGCGTTACACCT+TGG | + | chr1_2:33520503-33520522 | Msa0068010:intron | 45.0% |
| ! | TAAGTAGGGCGTTACACCTT+GGG | + | chr1_2:33520504-33520523 | Msa0068010:intron | 45.0% |
| TAACATCAACCTGACGATGG+TGG | - | chr1_2:33520616-33520635 | None:intergenic | 45.0% | |
| CTGTAACATCAACCTGACGA+TGG | - | chr1_2:33520619-33520638 | None:intergenic | 45.0% | |
| !!! | GTTTTCGAGTGCATGTGGTT+TGG | - | chr1_2:33521443-33521462 | None:intergenic | 45.0% |
| !!! | GATGTGTTTTCGAGTGCATG+TGG | - | chr1_2:33521448-33521467 | None:intergenic | 45.0% |
| !!! | CGATTTTGGTGCTGTTGCTA+TGG | + | chr1_2:33521519-33521538 | Msa0068010:intron | 45.0% |
| ! | TCAGCTAAGAAAGTGTACGG+TGG | + | chr1_2:33517550-33517569 | Msa0068010:CDS | 45.0% |
| AGCTTCCTATGTTGCGTCAA+GGG | + | chr1_2:33517608-33517627 | Msa0068010:CDS | 45.0% | |
| ATGTTCCCTTGACGCAACAT+AGG | - | chr1_2:33517616-33517635 | None:intergenic | 45.0% | |
| ATGTTGCGTCAAGGGAACAT+TGG | + | chr1_2:33517616-33517635 | Msa0068010:CDS | 45.0% | |
| !!! | ACAACGGTTTTGCTGTTTCG+AGG | + | chr1_2:33521674-33521693 | Msa0068010:CDS | 45.0% |
| ! | TGATTTGTCGAAACGGGTAG+TGG | + | chr1_2:33521804-33521823 | Msa0068010:intron | 45.0% |
| ACAACCTTCTCCTCTGATTC+AGG | - | chr1_2:33517837-33517856 | None:intergenic | 45.0% | |
| ACCATGTCACAACACCAAAG+GGG | - | chr1_2:33517890-33517909 | None:intergenic | 45.0% | |
| CACCATGTCACAACACCAAA+GGG | - | chr1_2:33517891-33517910 | None:intergenic | 45.0% | |
| GACATGGTGGTACAACAAAG+AGG | + | chr1_2:33517902-33517921 | Msa0068010:CDS | 45.0% | |
| CAACAAAGAGGACACTGAGT+TGG | + | chr1_2:33517914-33517933 | Msa0068010:CDS | 45.0% | |
| AGATTCCATTAGGACCAGTC+AGG | - | chr1_2:33518001-33518020 | None:intergenic | 45.0% | |
| TTGGAAAGCAGTCCGCTAAA+GGG | + | chr1_2:33518090-33518109 | Msa0068010:CDS | 45.0% | |
| GTTCATCTTTAGGCTGAGGA+AGG | - | chr1_2:33522144-33522163 | None:intergenic | 45.0% | |
| CTGTGTTCATCTTTAGGCTG+AGG | - | chr1_2:33518146-33518165 | None:intergenic | 45.0% | |
| CTCAGCCTAAAGATGAACAC+AGG | + | chr1_2:33518144-33518163 | Msa0068010:CDS | 45.0% | |
| AGATGAACACAGGAAAGGCA+TGG | + | chr1_2:33518154-33518173 | Msa0068010:CDS | 45.0% | |
| !! | AGGCATGGCTTTAAACTGTC+TGG | + | chr1_2:33518169-33518188 | Msa0068010:CDS | 45.0% |
| !! | CATGGCTTTAAACTGTCTGG+AGG | + | chr1_2:33518172-33518191 | Msa0068010:CDS | 45.0% |
| GAACACCAAGAACCTTCCTT+TGG | + | chr1_2:33518241-33518260 | Msa0068010:CDS | 45.0% | |
| ACCAAGAACCTTCCTTTGGT+TGG | + | chr1_2:33518245-33518264 | Msa0068010:CDS | 45.0% | |
| ACCAACCAAAGGAAGGTTCT+TGG | - | chr1_2:33518249-33518268 | None:intergenic | 45.0% | |
| AAACCAACCTCACCAACCAA+AGG | - | chr1_2:33518260-33518279 | None:intergenic | 45.0% | |
| !! | TTGGTTGGTGAGGTTGGTTT+AGG | + | chr1_2:33518260-33518279 | Msa0068010:CDS | 45.0% |
| GTTTAGGAGCTGATCTTGTG+AGG | + | chr1_2:33518276-33518295 | Msa0068010:CDS | 45.0% | |
| GCTGATCTTGTGAGGATTGA+TGG | + | chr1_2:33518284-33518303 | Msa0068010:CDS | 45.0% | |
| GCAGAATCACAAGAGAATCC+AGG | - | chr1_2:33522329-33522348 | None:intergenic | 45.0% | |
| CTCTTGTGATTCTGCTTTGC+AGG | + | chr1_2:33518331-33518350 | Msa0068010:CDS | 45.0% | |
| ACTTACATTGTTAGGGGGAG+CGG | + | chr1_2:33518356-33518375 | Msa0068010:CDS | 45.0% | |
| !! | TGTTGGTGGTAAGAGAGTCT+TGG | + | chr1_2:33522394-33522413 | Msa0068010:CDS | 45.0% |
| ! | TTGGAGACAACTTTGAAGGC+TGG | + | chr1_2:33522413-33522432 | Msa0068010:CDS | 45.0% |
| ! | CTGACAATGATGGAATGGAG+TGG | + | chr1_2:33522480-33522499 | Msa0068010:CDS | 45.0% |
| CCAGCCATGTGTGTAAATAC+AGG | - | chr1_2:33523044-33523063 | None:intergenic | 45.0% | |
| CCTGTATTTACACACATGGC+TGG | + | chr1_2:33523041-33523060 | Msa0068010:intron | 45.0% | |
| ACACATGGCTGGAAGTTCTT+CGG | + | chr1_2:33523052-33523071 | Msa0068010:intron | 45.0% | |
| CTGCAGAACTGTAGGTGATA+GGG | - | chr1_2:33523087-33523106 | None:intergenic | 45.0% | |
| AGAAGCTCTTCCGTTCAAAG+AGG | + | chr1_2:33523135-33523154 | Msa0068010:CDS | 45.0% | |
| CATCAGCAGTCCTCTTTGAA+CGG | - | chr1_2:33523148-33523167 | None:intergenic | 45.0% | |
| ! | CTTTGGAGGAGGGAAGAAAA+TGG | - | chr1_2:33523171-33523190 | None:intergenic | 45.0% |
| ! | AAGAAAGTGTACGGTGGCCA+TGG | + | chr1_2:33517556-33517575 | Msa0068010:CDS | 50.0% |
| CGCAACATAGGAAGCTCAGA+AGG | - | chr1_2:33517604-33517623 | None:intergenic | 50.0% | |
| GAGCTTCCTATGTTGCGTCA+AGG | + | chr1_2:33517607-33517626 | Msa0068010:CDS | 50.0% | |
| !!! | ACAACGGTTTTGCTGTTCCG+AGG | + | chr1_2:33517662-33517681 | Msa0068010:CDS | 50.0% |
| GAAACAGGAAGTGGAGTTGC+TGG | + | chr1_2:33517801-33517820 | Msa0068010:intron | 50.0% | |
| GCTACCTGAATCAGAGGAGA+AGG | + | chr1_2:33517830-33517849 | Msa0068010:CDS | 50.0% | |
| GATGCTTTAGCACTCCCCTT+TGG | + | chr1_2:33517873-33517892 | Msa0068010:CDS | 50.0% | |
| !! | TCCCCTTTGGTGTTGTGACA+TGG | + | chr1_2:33517886-33517905 | Msa0068010:CDS | 50.0% |
| CCACCATGTCACAACACCAA+AGG | - | chr1_2:33517892-33517911 | None:intergenic | 50.0% | |
| !! | CCTTTGGTGTTGTGACATGG+TGG | + | chr1_2:33517889-33517908 | Msa0068010:CDS | 50.0% |
| !!! | GTGCTTTTGAAGTATCGCCG+AGG | - | chr1_2:33517950-33517969 | None:intergenic | 50.0% |
| CTGAGTTTGTGGGAAGAGCT+TGG | + | chr1_2:33518036-33518055 | Msa0068010:CDS | 50.0% | |
| GTTGGAAAGCAGTCCGCTAA+AGG | + | chr1_2:33518089-33518108 | Msa0068010:CDS | 50.0% | |
| !! | AAACTGTCTGGAGGCACCAT+TGG | + | chr1_2:33518181-33518200 | Msa0068010:CDS | 50.0% |
| ! | GAACCTTCCTTTGGTTGGTG+AGG | + | chr1_2:33518250-33518269 | Msa0068010:CDS | 50.0% |
| CAACCTCACCAACCAAAGGA+AGG | - | chr1_2:33518256-33518275 | None:intergenic | 50.0% | |
| !! | CTTCCTTTGGTTGGTGAGGT+TGG | + | chr1_2:33518254-33518273 | Msa0068010:CDS | 50.0% |
| GTTGGTCAGAGTCTCCTGTA+AGG | + | chr1_2:33518453-33518472 | Msa0068010:intron | 50.0% | |
| GGGATTCTGCAGAACTGACA+CGG | - | chr1_2:33518510-33518529 | None:intergenic | 50.0% | |
| TACCGTCACCAACAACGTCT+AGG | - | chr1_2:33519462-33519481 | None:intergenic | 50.0% | |
| GCTTGAGGTGCAAGTAATGG+AGG | + | chr1_2:33519980-33519999 | Msa0068010:intron | 50.0% | |
| CATCCATACAGACAGGTAGG+CGG | - | chr1_2:33520135-33520154 | None:intergenic | 50.0% | |
| CTGTGCAGGAGTAGTTGCTT+TGG | + | chr1_2:33520163-33520182 | Msa0068010:intron | 50.0% | |
| TGACGACGTCGATGTCATCT+TGG | + | chr1_2:33520565-33520584 | Msa0068010:intron | 50.0% | |
| !! | ATCAACCTGACGATGGTGGA+AGG | - | chr1_2:33520612-33520631 | None:intergenic | 50.0% |
| CAACGGGCAACAAGCAAATG+TGG | + | chr1_2:33520709-33520728 | Msa0068010:intron | 50.0% | |
| ! | AGTGGGACTAGCGGTTAATG+CGG | - | chr1_2:33520758-33520777 | None:intergenic | 50.0% |
| CCTGTAATTTGGGCGAGTTC+CGG | - | chr1_2:33520950-33520969 | None:intergenic | 50.0% | |
| CGGAACTCGCCCAAATTACA+GGG | + | chr1_2:33520948-33520967 | Msa0068010:intron | 50.0% | |
| GGAACTCGCCCAAATTACAG+GGG | + | chr1_2:33520949-33520968 | Msa0068010:intron | 50.0% | |
| GAACTCGCCCAAATTACAGG+GGG | + | chr1_2:33520950-33520969 | Msa0068010:intron | 50.0% | |
| CGTAGCTTAGCTCAGTTGGT+TGG | + | chr1_2:33521053-33521072 | Msa0068010:intron | 50.0% | |
| ! | AAGAAAGTGTACGGTGGCCA+TGG | + | chr1_2:33517556-33517575 | Msa0068010:CDS | 50.0% |
| CGCAACATAGGAAGCTCAGA+AGG | - | chr1_2:33517604-33517623 | None:intergenic | 50.0% | |
| GAGCTTCCTATGTTGCGTCA+AGG | + | chr1_2:33517607-33517626 | Msa0068010:CDS | 50.0% | |
| GCTACCTGAATCAGAGGAGA+AGG | + | chr1_2:33517830-33517849 | Msa0068010:CDS | 50.0% | |
| GATGCTTTAGCACTCCCCTT+TGG | + | chr1_2:33517873-33517892 | Msa0068010:CDS | 50.0% | |
| !! | TCCCCTTTGGTGTTGTGACA+TGG | + | chr1_2:33517886-33517905 | Msa0068010:CDS | 50.0% |
| CCACCATGTCACAACACCAA+AGG | - | chr1_2:33517892-33517911 | None:intergenic | 50.0% | |
| !! | CCTTTGGTGTTGTGACATGG+TGG | + | chr1_2:33517889-33517908 | Msa0068010:CDS | 50.0% |
| !!! | GTGCTTTTGAAGTATCGCCG+AGG | - | chr1_2:33517950-33517969 | None:intergenic | 50.0% |
| GTTGGAAAGCAGTCCGCTAA+AGG | + | chr1_2:33518089-33518108 | Msa0068010:CDS | 50.0% | |
| !! | AAACTGTCTGGAGGCACCAT+TGG | + | chr1_2:33518181-33518200 | Msa0068010:CDS | 50.0% |
| ! | GAACCTTCCTTTGGTTGGTG+AGG | + | chr1_2:33518250-33518269 | Msa0068010:CDS | 50.0% |
| CAACCTCACCAACCAAAGGA+AGG | - | chr1_2:33518256-33518275 | None:intergenic | 50.0% | |
| !! | CTTCCTTTGGTTGGTGAGGT+TGG | + | chr1_2:33518254-33518273 | Msa0068010:CDS | 50.0% |
| ! | AGAGAATCCAGGAGAGCACA+TGG | - | chr1_2:33522318-33522337 | None:intergenic | 50.0% |
| ! | TGGAAGTTCTTCGGTGTGGA+AGG | + | chr1_2:33523061-33523080 | Msa0068010:intron | 50.0% |
| CCTGCAGAACTGTAGGTGAT+AGG | - | chr1_2:33523088-33523107 | None:intergenic | 50.0% | |
| CCTATCACCTACAGTTCTGC+AGG | + | chr1_2:33523085-33523104 | Msa0068010:CDS | 50.0% | |
| AAAGCAGCCTGCAGAACTGT+AGG | - | chr1_2:33523095-33523114 | None:intergenic | 50.0% | |
| CGGAAGAGCTTCTCAACTTC+TGG | - | chr1_2:33523128-33523147 | None:intergenic | 50.0% | |
| AAAGTGTACGGTGGCCATGG+TGG | + | chr1_2:33517559-33517578 | Msa0068010:CDS | 55.0% | |
| TGTGGGAAGAGCTTGGGACT+TGG | + | chr1_2:33518043-33518062 | Msa0068010:CDS | 55.0% | |
| !! | AGCGGACGTGTTCAGGTTGT+TGG | + | chr1_2:33518374-33518393 | Msa0068010:CDS | 55.0% |
| ACGGTCGTGTCATCCCTTAC+AGG | - | chr1_2:33518470-33518489 | None:intergenic | 55.0% | |
| GTTTAGCCGGTGAAACGCCA+AGG | + | chr1_2:33518728-33518747 | Msa0068010:intron | 55.0% | |
| GCAGTTGGCATCATGGGTGA+CGG | + | chr1_2:33519436-33519455 | Msa0068010:intron | 55.0% | |
| ! | GGCCTAGACGTTGTTGGTGA+CGG | + | chr1_2:33519457-33519476 | Msa0068010:intron | 55.0% |
| GTAGGCGGTCAAAACCACAG+GGG | - | chr1_2:33520120-33520139 | None:intergenic | 55.0% | |
| GGTAGGCGGTCAAAACCACA+GGG | - | chr1_2:33520121-33520140 | None:intergenic | 55.0% | |
| AGGTAGGCGGTCAAAACCAC+AGG | - | chr1_2:33520122-33520141 | None:intergenic | 55.0% | |
| TGACCGCCTACCTGTCTGTA+TGG | + | chr1_2:33520129-33520148 | Msa0068010:intron | 55.0% | |
| TGGATGAGTAGACGCTGTGC+AGG | + | chr1_2:33520149-33520168 | Msa0068010:intron | 55.0% | |
| TTGCCCACTTGACAGGGACT+TGG | + | chr1_2:33520303-33520322 | Msa0068010:intron | 55.0% | |
| CCTCCAAGTCCCTGTCAAGT+GGG | - | chr1_2:33520309-33520328 | None:intergenic | 55.0% | |
| TCCTCCAAGTCCCTGTCAAG+TGG | - | chr1_2:33520310-33520329 | None:intergenic | 55.0% | |
| CCGGAACTCGCCCAAATTAC+AGG | + | chr1_2:33520947-33520966 | Msa0068010:intron | 55.0% | |
| AAGGTCCGTGGTTCAAACCC+CGG | + | chr1_2:33521094-33521113 | Msa0068010:intron | 55.0% | |
| AAAGTGTACGGTGGCCATGG+TGG | + | chr1_2:33517559-33517578 | Msa0068010:CDS | 55.0% | |
| !! | GAAACGGGTAGTGGAGTTGC+TGG | + | chr1_2:33521813-33521832 | Msa0068010:intron | 55.0% |
| GGAAGATCCATGTGCTCTCC+TGG | + | chr1_2:33518305-33518324 | Msa0068010:CDS | 55.0% | |
| !! | AGCGGACGTGTTCAGGTTGT+TGG | + | chr1_2:33518374-33518393 | Msa0068010:CDS | 55.0% |
| !! | GGACGTGTTCAGGTTGTTGG+TGG | + | chr1_2:33518377-33518396 | Msa0068010:intron | 55.0% |
| TGGCTGGAAGTTCTTCGGTG+TGG | + | chr1_2:33523057-33523076 | Msa0068010:intron | 55.0% | |
| GGTCGCGTCATCAGGACACA+CGG | - | chr1_2:33518489-33518508 | None:intergenic | 60.0% | |
| ACTGACACGGTCGCGTCATC+AGG | - | chr1_2:33518497-33518516 | None:intergenic | 60.0% | |
| ! | GGTGACGGCCTAGACGTTGT+TGG | + | chr1_2:33519451-33519470 | Msa0068010:intron | 60.0% |
| CCCACTTGACAGGGACTTGG+AGG | + | chr1_2:33520306-33520325 | Msa0068010:intron | 60.0% | |
| AGACGCCTTCCACCATCGTC+AGG | + | chr1_2:33520604-33520623 | Msa0068010:intron | 60.0% | |
| AGTGGCCGGGGTTTGAACCA+CGG | - | chr1_2:33521102-33521121 | None:intergenic | 60.0% | |
| TAGGGGGAGCGGACGTGTTC+AGG | + | chr1_2:33518367-33518386 | Msa0068010:CDS | 65.0% | |
| TAGGGGGAGCGGACGTGTTC+AGG | + | chr1_2:33518367-33518386 | Msa0068010:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 33517472 | 33523193 | 33517472 | ID=Msa0068010;Name=Msa0068010 |
| chr1_2 | mRNA | 33517472 | 33523193 | 33517472 | ID=Msa0068010-mRNA-1;Parent=Msa0068010;Name=Msa0068010-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|6|0|547 |
| chr1_2 | exon | 33517472 | 33517721 | 33517472 | ID=Msa0068010-mRNA-1:exon:11000;Parent=Msa0068010-mRNA-1 |
| chr1_2 | exon | 33517808 | 33518395 | 33517808 | ID=Msa0068010-mRNA-1:exon:11001;Parent=Msa0068010-mRNA-1 |
| chr1_2 | exon | 33521566 | 33521695 | 33521566 | ID=Msa0068010-mRNA-1:exon:11002;Parent=Msa0068010-mRNA-1 |
| chr1_2 | exon | 33521824 | 33522078 | 33521824 | ID=Msa0068010-mRNA-1:exon:11003;Parent=Msa0068010-mRNA-1 |
| chr1_2 | exon | 33522232 | 33522525 | 33522232 | ID=Msa0068010-mRNA-1:exon:11004;Parent=Msa0068010-mRNA-1 |
| chr1_2 | exon | 33523067 | 33523193 | 33523067 | ID=Msa0068010-mRNA-1:exon:11005;Parent=Msa0068010-mRNA-1 |
| chr1_2 | CDS | 33517472 | 33517721 | 33517472 | ID=Msa0068010-mRNA-1:cds;Parent=Msa0068010-mRNA-1 |
| chr1_2 | CDS | 33517808 | 33518395 | 33517808 | ID=Msa0068010-mRNA-1:cds;Parent=Msa0068010-mRNA-1 |
| chr1_2 | CDS | 33521566 | 33521695 | 33521566 | ID=Msa0068010-mRNA-1:cds;Parent=Msa0068010-mRNA-1 |
| chr1_2 | CDS | 33521824 | 33522078 | 33521824 | ID=Msa0068010-mRNA-1:cds;Parent=Msa0068010-mRNA-1 |
| chr1_2 | CDS | 33522232 | 33522525 | 33522232 | ID=Msa0068010-mRNA-1:cds;Parent=Msa0068010-mRNA-1 |
| chr1_2 | CDS | 33523067 | 33523193 | 33523067 | ID=Msa0068010-mRNA-1:cds;Parent=Msa0068010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
