Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0069160 | sp|O80494|P2B15_ARATH | 45.583 | 283 | 138 | 9 | 11 | 282 | 3 | 280 | 1.61e-74 | 232 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0069160 | B7FIK6 | 95.390 | 282 | 12 | 1 | 1 | 282 | 1 | 281 | 0.0 | 558 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0069160 | Msa1221630 | 0.803424 | 3.509313e-49 | -8.615850e-47 |
| Msa0069160 | Msa1265020 | 0.804961 | 1.680137e-49 | -8.615850e-47 |
| Msa0069160 | Msa1337850 | 0.817547 | 3.116233e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0069160 | MtrunA17_Chr1g0192371 | 95.390 | 282 | 12 | 1 | 1 | 282 | 1 | 281 | 0.0 | 557 |
| Msa0069160 | MtrunA17_Chr7g0272091 | 60.839 | 286 | 100 | 4 | 4 | 282 | 3 | 283 | 1.58e-125 | 359 |
| Msa0069160 | MtrunA17_Chr7g0272101 | 45.126 | 277 | 130 | 7 | 8 | 282 | 1 | 257 | 5.89e-75 | 229 |
| Msa0069160 | MtrunA17_Chr1g0189671 | 42.705 | 281 | 143 | 8 | 8 | 282 | 4 | 272 | 2.96e-69 | 215 |
| Msa0069160 | MtrunA17_Chr1g0189781 | 41.489 | 282 | 146 | 7 | 6 | 282 | 6 | 273 | 8.68e-69 | 214 |
| Msa0069160 | MtrunA17_Chr1g0189821 | 42.029 | 276 | 144 | 5 | 9 | 282 | 5 | 266 | 1.36e-65 | 206 |
| Msa0069160 | MtrunA17_Chr1g0203281 | 39.789 | 284 | 151 | 5 | 6 | 282 | 2 | 272 | 1.04e-64 | 204 |
| Msa0069160 | MtrunA17_Chr1g0189611 | 41.727 | 278 | 147 | 5 | 6 | 282 | 2 | 265 | 1.11e-63 | 201 |
| Msa0069160 | MtrunA17_Chr1g0189591 | 40.614 | 293 | 151 | 8 | 11 | 282 | 16 | 306 | 4.11e-63 | 201 |
| Msa0069160 | MtrunA17_Chr1g0189721 | 38.214 | 280 | 154 | 7 | 6 | 282 | 2 | 265 | 1.21e-62 | 198 |
| Msa0069160 | MtrunA17_Chr4g0010881 | 41.155 | 277 | 121 | 6 | 8 | 282 | 1 | 237 | 2.31e-62 | 196 |
| Msa0069160 | MtrunA17_Chr1g0189621 | 41.219 | 279 | 146 | 6 | 6 | 282 | 2 | 264 | 2.85e-62 | 197 |
| Msa0069160 | MtrunA17_Chr1g0190071 | 39.510 | 286 | 152 | 9 | 9 | 282 | 5 | 281 | 1.23e-58 | 188 |
| Msa0069160 | MtrunA17_Chr1g0189751 | 40.714 | 280 | 147 | 7 | 6 | 282 | 2 | 265 | 3.71e-58 | 187 |
| Msa0069160 | MtrunA17_Chr1g0203331 | 41.564 | 243 | 133 | 5 | 24 | 263 | 5 | 241 | 1.73e-55 | 179 |
| Msa0069160 | MtrunA17_Chr1g0189641 | 36.620 | 284 | 161 | 6 | 6 | 282 | 2 | 273 | 8.49e-55 | 178 |
| Msa0069160 | MtrunA17_Chr1g0157451 | 38.435 | 294 | 148 | 12 | 8 | 282 | 4 | 283 | 5.16e-54 | 177 |
| Msa0069160 | MtrunA17_Chr3g0097191 | 36.101 | 277 | 156 | 6 | 8 | 282 | 10 | 267 | 2.10e-49 | 164 |
| Msa0069160 | MtrunA17_Chr1g0189661 | 37.102 | 283 | 162 | 7 | 8 | 282 | 4 | 278 | 1.78e-48 | 163 |
| Msa0069160 | MtrunA17_Chr1g0189711 | 37.282 | 287 | 153 | 10 | 8 | 282 | 4 | 275 | 1.63e-47 | 159 |
| Msa0069160 | MtrunA17_Chr7g0260801 | 38.929 | 280 | 143 | 9 | 9 | 282 | 17 | 274 | 2.43e-46 | 157 |
| Msa0069160 | MtrunA17_Chr1g0189771 | 43.114 | 167 | 94 | 1 | 6 | 171 | 10 | 176 | 9.80e-45 | 149 |
| Msa0069160 | MtrunA17_Chr1g0189701 | 36.519 | 293 | 158 | 10 | 8 | 282 | 35 | 317 | 1.42e-44 | 153 |
| Msa0069160 | MtrunA17_Chr3g0078331 | 33.225 | 307 | 169 | 7 | 6 | 282 | 15 | 315 | 1.84e-41 | 145 |
| Msa0069160 | MtrunA17_Chr1g0189571 | 41.176 | 204 | 102 | 6 | 95 | 282 | 4 | 205 | 5.66e-40 | 138 |
| Msa0069160 | MtrunA17_Chr3g0095261 | 32.881 | 295 | 157 | 8 | 8 | 282 | 10 | 283 | 9.54e-40 | 140 |
| Msa0069160 | MtrunA17_Chr1g0189541 | 40.526 | 190 | 96 | 5 | 93 | 282 | 12 | 184 | 6.93e-34 | 121 |
| Msa0069160 | MtrunA17_Chr2g0317291 | 36.364 | 187 | 105 | 5 | 95 | 279 | 38 | 212 | 1.01e-24 | 99.0 |
| Msa0069160 | MtrunA17_Chr1g0189651 | 36.170 | 188 | 99 | 4 | 95 | 282 | 13 | 179 | 1.18e-24 | 97.4 |
| Msa0069160 | MtrunA17_Chr7g0265551 | 25.175 | 286 | 175 | 8 | 11 | 281 | 94 | 355 | 2.82e-23 | 97.8 |
| Msa0069160 | MtrunA17_Chr6g0472801 | 24.746 | 295 | 176 | 10 | 1 | 282 | 15 | 276 | 7.74e-23 | 95.1 |
| Msa0069160 | MtrunA17_Chr8g0350401 | 31.000 | 200 | 116 | 5 | 11 | 192 | 25 | 220 | 2.52e-22 | 94.0 |
| Msa0069160 | MtrunA17_Chr1g0203751 | 34.459 | 148 | 95 | 2 | 6 | 153 | 26 | 171 | 5.48e-22 | 92.8 |
| Msa0069160 | MtrunA17_Chr4g0057281 | 24.483 | 290 | 168 | 9 | 8 | 281 | 19 | 273 | 3.65e-19 | 85.1 |
| Msa0069160 | MtrunA17_Chr4g0043591 | 28.390 | 236 | 128 | 8 | 52 | 282 | 91 | 290 | 1.38e-17 | 80.9 |
| Msa0069160 | MtrunA17_Chr5g0397981 | 26.627 | 169 | 114 | 5 | 3 | 168 | 30 | 191 | 6.81e-15 | 73.2 |
| Msa0069160 | MtrunA17_Chr1g0188311 | 35.971 | 139 | 74 | 6 | 135 | 263 | 22 | 155 | 1.06e-14 | 70.1 |
| Msa0069160 | MtrunA17_Chr7g0260811 | 40.404 | 99 | 55 | 2 | 76 | 172 | 46 | 142 | 2.32e-14 | 69.3 |
| Msa0069160 | MtrunA17_Chr2g0300961 | 29.286 | 140 | 83 | 4 | 11 | 150 | 7 | 130 | 4.60e-13 | 65.1 |
| Msa0069160 | MtrunA17_Chr3g0143881 | 34.351 | 131 | 60 | 6 | 153 | 282 | 2 | 107 | 3.38e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0069160 | AT1G09155.1 | 45.583 | 283 | 138 | 9 | 11 | 282 | 3 | 280 | 1.64e-75 | 232 |
| Msa0069160 | AT1G56240.1 | 46.975 | 281 | 135 | 8 | 11 | 281 | 4 | 280 | 1.83e-68 | 214 |
| Msa0069160 | AT1G56250.1 | 45.745 | 282 | 139 | 8 | 11 | 282 | 4 | 281 | 1.81e-67 | 211 |
| Msa0069160 | AT2G02240.1 | 40.433 | 277 | 145 | 5 | 6 | 281 | 59 | 316 | 5.57e-66 | 209 |
| Msa0069160 | AT2G02360.1 | 40.426 | 282 | 137 | 7 | 6 | 281 | 12 | 268 | 5.43e-64 | 202 |
| Msa0069160 | AT2G02230.1 | 35.806 | 310 | 160 | 6 | 6 | 282 | 30 | 333 | 1.71e-61 | 198 |
| Msa0069160 | AT1G80110.1 | 40.071 | 282 | 134 | 7 | 8 | 281 | 1 | 255 | 3.57e-60 | 192 |
| Msa0069160 | AT2G02250.1 | 38.489 | 278 | 146 | 7 | 8 | 281 | 47 | 303 | 2.45e-59 | 191 |
| Msa0069160 | AT2G02340.1 | 37.143 | 280 | 160 | 6 | 6 | 281 | 34 | 301 | 3.19e-55 | 181 |
| Msa0069160 | AT2G02320.1 | 36.429 | 280 | 153 | 7 | 7 | 281 | 39 | 298 | 5.72e-51 | 170 |
| Msa0069160 | AT2G02310.1 | 35.943 | 281 | 157 | 4 | 6 | 282 | 43 | 304 | 9.16e-49 | 164 |
| Msa0069160 | AT2G02350.2 | 34.859 | 284 | 160 | 7 | 3 | 281 | 19 | 282 | 1.65e-46 | 158 |
| Msa0069160 | AT2G02300.1 | 34.602 | 289 | 142 | 11 | 4 | 282 | 30 | 281 | 3.61e-45 | 154 |
| Msa0069160 | AT5G24560.1 | 40.659 | 182 | 95 | 2 | 7 | 188 | 2 | 170 | 3.46e-40 | 139 |
| Msa0069160 | AT3G53000.1 | 25.517 | 290 | 176 | 8 | 7 | 281 | 20 | 284 | 3.92e-26 | 104 |
| Msa0069160 | AT5G52120.1 | 33.333 | 153 | 96 | 3 | 7 | 154 | 20 | 171 | 6.16e-21 | 90.5 |
| Msa0069160 | AT3G61060.2 | 24.913 | 289 | 165 | 8 | 11 | 282 | 28 | 281 | 9.70e-21 | 90.1 |
| Msa0069160 | AT3G61060.1 | 24.567 | 289 | 165 | 8 | 11 | 282 | 28 | 280 | 1.55e-20 | 89.4 |
| Msa0069160 | AT1G63090.1 | 34.146 | 164 | 99 | 3 | 7 | 168 | 25 | 181 | 5.50e-20 | 87.8 |
| Msa0069160 | AT1G12710.1 | 29.878 | 164 | 106 | 3 | 7 | 168 | 27 | 183 | 1.75e-16 | 78.2 |
| Msa0069160 | AT4G19850.3 | 29.958 | 237 | 119 | 10 | 57 | 282 | 18 | 218 | 1.89e-15 | 73.9 |
| Msa0069160 | AT2G02350.1 | 30.818 | 159 | 92 | 4 | 127 | 281 | 21 | 165 | 1.86e-14 | 70.5 |
| Msa0069160 | AT4G19850.1 | 31.414 | 191 | 89 | 8 | 102 | 282 | 18 | 176 | 3.01e-14 | 69.7 |
| Msa0069160 | AT4G19840.1 | 26.496 | 234 | 134 | 8 | 53 | 282 | 46 | 245 | 7.21e-13 | 67.4 |
| Msa0069160 | AT1G65390.1 | 26.230 | 183 | 99 | 6 | 106 | 282 | 258 | 410 | 9.36e-12 | 65.1 |
| Msa0069160 | AT4G19850.2 | 34.074 | 135 | 76 | 5 | 54 | 180 | 15 | 144 | 4.61e-11 | 61.6 |
| Msa0069160 | AT1G12710.2 | 28.000 | 150 | 101 | 2 | 7 | 154 | 27 | 171 | 4.68e-11 | 62.8 |
Find 77 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAATCCAATTGGTATTT+AGG | 0.105843 | 1_2:-37350247 | None:intergenic |
| AAGCAAGTTTACCTTGATTC+AGG | 0.264823 | 1_2:-37350891 | None:intergenic |
| ATAGTCAAACATGTTTATTT+TGG | 0.274613 | 1_2:-37353385 | None:intergenic |
| TTAGGAAATGGCTCATCTTA+TGG | 0.282622 | 1_2:-37350229 | None:intergenic |
| AAATTCGAGTTCCATCTAAA+AGG | 0.290157 | 1_2:+37353230 | Msa0069160:CDS |
| CTTTAAATTGGACAAGTATT+CGG | 0.294296 | 1_2:+37350785 | Msa0069160:CDS |
| CAAATTGATAGAAGATAATA+AGG | 0.294509 | 1_2:+37353207 | Msa0069160:CDS |
| TGTTATGTAGAGCTTTAAAT+TGG | 0.303998 | 1_2:+37350773 | Msa0069160:intron |
| ATGGCCAACAAAGTGCAAAA+TGG | 0.309663 | 1_2:+37353112 | Msa0069160:CDS |
| TTTAAATTGGACAAGTATTC+GGG | 0.325991 | 1_2:+37350786 | Msa0069160:CDS |
| GTGAGCTGGTTAGAGATTAA+AGG | 0.341543 | 1_2:+37352974 | Msa0069160:CDS |
| TCCAATTGGTATTTAGGAAA+TGG | 0.341753 | 1_2:-37350241 | None:intergenic |
| TAGAGATTAAAGGCAAAATA+AGG | 0.357825 | 1_2:+37352984 | Msa0069160:CDS |
| TTGTAGAGTGAGGGGATTGA+GGG | 0.382164 | 1_2:-37350492 | None:intergenic |
| GCCATTTCCTAAATACCAAT+TGG | 0.396658 | 1_2:+37350240 | Msa0069160:five_prime_UTR |
| TGGGTGGATGGAAATTGAAT+TGG | 0.398175 | 1_2:+37353258 | Msa0069160:CDS |
| AAGATGAGTGTTATGGAGGT+TGG | 0.403654 | 1_2:+37353316 | Msa0069160:CDS |
| GGAGGTTAAGATGAGTGTTA+TGG | 0.413015 | 1_2:+37353309 | Msa0069160:CDS |
| GGAGGTTGGTTATAGATTGA+AGG | 0.415395 | 1_2:+37353330 | Msa0069160:CDS |
| TGGCCAACAAAGTGCAAAAT+GGG | 0.432183 | 1_2:+37353113 | Msa0069160:CDS |
| TACGATTCACAAAATCCAAT+TGG | 0.437643 | 1_2:-37350255 | None:intergenic |
| GCAAACCACATAGGCACATA+TGG | 0.446880 | 1_2:+37350286 | Msa0069160:exon |
| ATTGTAGAGTGAGGGGATTG+AGG | 0.448664 | 1_2:-37350493 | None:intergenic |
| TGTCTAAGAGCAGAGGTTGT+TGG | 0.452220 | 1_2:-37350553 | None:intergenic |
| TTGACAATTCTCTTGCAGAT+AGG | 0.453970 | 1_2:-37350824 | None:intergenic |
| AATTCGAGTTCCATCTAAAA+GGG | 0.465884 | 1_2:+37353231 | Msa0069160:CDS |
| TAAACAACGTAAGTCGTGTT+TGG | 0.468253 | 1_2:-37353022 | None:intergenic |
| AGAAGAAGATTGTAGAGTGA+GGG | 0.469637 | 1_2:-37350501 | None:intergenic |
| GGAGTAATGATCCATTGTAT+TGG | 0.470028 | 1_2:+37350853 | Msa0069160:CDS |
| GGGTGGATGGAAATTGAATT+GGG | 0.484481 | 1_2:+37353259 | Msa0069160:CDS |
| GTTCCATCTAAAAGGGATGA+TGG | 0.488515 | 1_2:+37353238 | Msa0069160:CDS |
| AAGAAGAAGATTGTAGAGTG+AGG | 0.489856 | 1_2:-37350502 | None:intergenic |
| TGATGCATGTAATTTCTCAA+TGG | 0.493376 | 1_2:+37350382 | Msa0069160:CDS |
| AGAAGTAAAACCAAAGGTAA+AGG | 0.499433 | 1_2:+37353411 | Msa0069160:three_prime_UTR |
| AACAACCTCTGCTCTTAGAC+AGG | 0.500296 | 1_2:+37350555 | Msa0069160:CDS |
| CAGCTAACTCTGACTCACTT+TGG | 0.504992 | 1_2:+37350426 | Msa0069160:CDS |
| AAGGGTGGTCTCATCGTTGA+AGG | 0.507712 | 1_2:+37353349 | Msa0069160:CDS |
| ATGATCCATTGTATTGGAGC+TGG | 0.508075 | 1_2:+37350859 | Msa0069160:CDS |
| GAAGAAGATTGTAGAGTGAG+GGG | 0.513534 | 1_2:-37350500 | None:intergenic |
| GAGGTTGGTTATAGATTGAA+GGG | 0.516486 | 1_2:+37353331 | Msa0069160:CDS |
| TTATGAAAAGCATAGAAAGA+TGG | 0.519786 | 1_2:+37353177 | Msa0069160:CDS |
| ATTGCAACTGATACCTCAGC+TGG | 0.529997 | 1_2:-37353091 | None:intergenic |
| CAAGAGAATTGTCAATAACA+TGG | 0.547861 | 1_2:+37350832 | Msa0069160:CDS |
| GGAGATCATCTCCTGAATCA+AGG | 0.554634 | 1_2:+37350880 | Msa0069160:CDS |
| TTCCATCTAAAAGGGATGAT+GGG | 0.560247 | 1_2:+37353239 | Msa0069160:CDS |
| CAGATTCGCAGAGGTGGCTG+AGG | 0.568694 | 1_2:+37352943 | Msa0069160:intron |
| AGCTGAGGTATCAGTTGCAA+TGG | 0.570422 | 1_2:+37353093 | Msa0069160:CDS |
| CTCCGGCAGAGTATCTATGT+TGG | 0.572603 | 1_2:-37350321 | None:intergenic |
| TAAAAGGGATGATGGGTGGA+TGG | 0.573430 | 1_2:+37353246 | Msa0069160:CDS |
| AAGGTTTCACATCGTATGTA+CGG | 0.575892 | 1_2:+37353055 | Msa0069160:CDS |
| ATATAGGCAAATTCGATGGT+AGG | 0.587544 | 1_2:-37350188 | None:intergenic |
| AATTGCCATATGTGCCTATG+TGG | 0.587816 | 1_2:-37350291 | None:intergenic |
| CTCCAACATAGATACTCTGC+CGG | 0.588866 | 1_2:+37350319 | Msa0069160:CDS |
| GAGAAATTACATGCATCAAG+TGG | 0.592564 | 1_2:-37350377 | None:intergenic |
| GATCTCCAGCTCCAATACAA+TGG | 0.602031 | 1_2:-37350864 | None:intergenic |
| GAAAAGCATAGAAAGATGGA+AGG | 0.602899 | 1_2:+37353181 | Msa0069160:CDS |
| CTTGATATAGGCAAATTCGA+TGG | 0.604481 | 1_2:-37350192 | None:intergenic |
| CTGAGGTAAGAACAGTGAGC+TGG | 0.605200 | 1_2:+37352960 | Msa0069160:CDS |
| GGTTAAGATGAGTGTTATGG+AGG | 0.606997 | 1_2:+37353312 | Msa0069160:CDS |
| AATGATGTCTTCATAGTCAG+AGG | 0.609018 | 1_2:-37350462 | None:intergenic |
| AGCTGCTGAATGCAAAGTTG+AGG | 0.612428 | 1_2:-37350408 | None:intergenic |
| ACTTGATTCTGCGCCAGCTG+AGG | 0.612928 | 1_2:+37353078 | Msa0069160:CDS |
| CGTTGTTTATCTCATCACAA+AGG | 0.620339 | 1_2:+37353036 | Msa0069160:CDS |
| CAACAAAGTGCAAAATGGGA+TGG | 0.622257 | 1_2:+37353117 | Msa0069160:CDS |
| ATACTGCAGATTCGCAGAGG+TGG | 0.625701 | 1_2:+37352937 | Msa0069160:intron |
| CATCTAAAAGGGATGATGGG+TGG | 0.630515 | 1_2:+37353242 | Msa0069160:CDS |
| TTTCTGTGGTGAAGTTGACA+TGG | 0.634225 | 1_2:+37353288 | Msa0069160:CDS |
| TATAGTAGAAGTAAAACCAA+AGG | 0.647785 | 1_2:+37353405 | Msa0069160:three_prime_UTR |
| TGGCTCCTGTCTAAGAGCAG+AGG | 0.651587 | 1_2:-37350560 | None:intergenic |
| CAACATAGATACTCTGCCGG+AGG | 0.653807 | 1_2:+37350322 | Msa0069160:CDS |
| AATCTCGAAGCAAACCACAT+AGG | 0.654386 | 1_2:+37350277 | Msa0069160:five_prime_UTR |
| ATGATGTCTTCATAGTCAGA+GGG | 0.655082 | 1_2:-37350461 | None:intergenic |
| GTTGGTTATAGATTGAAGGG+TGG | 0.658722 | 1_2:+37353334 | Msa0069160:CDS |
| ATGATACTGCAGATTCGCAG+AGG | 0.685958 | 1_2:+37352934 | Msa0069160:intron |
| CTGTGGTGAAGTTGACATGG+AGG | 0.689911 | 1_2:+37353291 | Msa0069160:CDS |
| TTTGTACAATAAATACGAGG+AGG | 0.700943 | 1_2:+37353144 | Msa0069160:CDS |
| ATATTTGTACAATAAATACG+AGG | 0.779887 | 1_2:+37353141 | Msa0069160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAGAATATTTTTACTTT+TGG | + | chr1_2:37351499-37351518 | Msa0069160:intron | 10.0% |
| !!! | AAAATTTTAAACTTTTTAGA+AGG | - | chr1_2:37351655-37351674 | None:intergenic | 10.0% |
| !! | TTTATTTATGTTAAAAATGT+TGG | + | chr1_2:37352716-37352735 | Msa0069160:intron | 10.0% |
| !! | GAATAATTGAATTAAACATT+TGG | - | chr1_2:37350957-37350976 | None:intergenic | 15.0% |
| !!! | ATTTGTGTTATTTTATTTGA+GGG | - | chr1_2:37351014-37351033 | None:intergenic | 15.0% |
| !!! | AATTTGTGTTATTTTATTTG+AGG | - | chr1_2:37351015-37351034 | None:intergenic | 15.0% |
| !! | TATTAAATATAAACGTGATA+AGG | - | chr1_2:37351227-37351246 | None:intergenic | 15.0% |
| !! | CAAATATAGAAATATAGTAT+TGG | + | chr1_2:37351579-37351598 | Msa0069160:intron | 15.0% |
| !! | AACAAGTTAAGAATTAAAAA+AGG | - | chr1_2:37351711-37351730 | None:intergenic | 15.0% |
| !!! | TTATGAATCCATTTTTTAAT+GGG | - | chr1_2:37351787-37351806 | None:intergenic | 15.0% |
| !!! | ATTATGAATCCATTTTTTAA+TGG | - | chr1_2:37351788-37351807 | None:intergenic | 15.0% |
| !!! | ACACTCTTTTTTTTTTTTTT+TGG | - | chr1_2:37351878-37351897 | None:intergenic | 15.0% |
| !! | TTTAATTATCTTCAACAAAT+AGG | - | chr1_2:37351980-37351999 | None:intergenic | 15.0% |
| !!! | ATTTTTTCTCGAAAAATAAT+AGG | - | chr1_2:37352249-37352268 | None:intergenic | 15.0% |
| !!! | TTAAAAAGACATTTTTAATG+AGG | - | chr1_2:37352344-37352363 | None:intergenic | 15.0% |
| !! | AGTATATTCATTAAATTACT+TGG | + | chr1_2:37352739-37352758 | Msa0069160:intron | 15.0% |
| !! | AAGTCTCATCATTTAAAAAT+GGG | - | chr1_2:37351842-37351861 | None:intergenic | 20.0% |
| !! | AAAGTCTCATCATTTAAAAA+TGG | - | chr1_2:37351843-37351862 | None:intergenic | 20.0% |
| !!! | TAATTAAATTTTAGAGTGCT+CGG | + | chr1_2:37352268-37352287 | Msa0069160:intron | 20.0% |
| !! | TAGGATGGTATATTATTAAA+GGG | + | chr1_2:37352529-37352548 | Msa0069160:intron | 20.0% |
| !!! | TCAATACTCTTAACATTTTT+AGG | - | chr1_2:37352790-37352809 | None:intergenic | 20.0% |
| !! | TATTAAACGTAAAAAACCAT+TGG | - | chr1_2:37352893-37352912 | None:intergenic | 20.0% |
| !! | ATATTTGTACAATAAATACG+AGG | + | chr1_2:37353141-37353160 | Msa0069160:CDS | 20.0% |
| !! | CAAATTGATAGAAGATAATA+AGG | + | chr1_2:37353207-37353226 | Msa0069160:CDS | 20.0% |
| !!! | ATAGTCAAACATGTTTATTT+TGG | - | chr1_2:37353388-37353407 | None:intergenic | 20.0% |
| ! | ACAAAATCCAATTGGTATTT+AGG | - | chr1_2:37350250-37350269 | None:intergenic | 25.0% |
| ! | TGTTGTAATTGAAACTATGT+TGG | - | chr1_2:37350607-37350626 | None:intergenic | 25.0% |
| !! | ATGTAGTTTTTGCAAAATCA+CGG | + | chr1_2:37350688-37350707 | Msa0069160:intron | 25.0% |
| ! | ATCAATTGTTAGAATCAACA+CGG | - | chr1_2:37350730-37350749 | None:intergenic | 25.0% |
| !!! | TGTTATGTAGAGCTTTAAAT+TGG | + | chr1_2:37350773-37350792 | Msa0069160:intron | 25.0% |
| ! | CTTTAAATTGGACAAGTATT+CGG | + | chr1_2:37350785-37350804 | Msa0069160:CDS | 25.0% |
| ! | TTTAAATTGGACAAGTATTC+GGG | + | chr1_2:37350786-37350805 | Msa0069160:CDS | 25.0% |
| ! | GCATGATAAACTTAAACAAA+AGG | - | chr1_2:37350928-37350947 | None:intergenic | 25.0% |
| ! | TGAATTAAACATTTGGATTC+AGG | - | chr1_2:37350950-37350969 | None:intergenic | 25.0% |
| ! | AGGTATAGAACAAATCTTAT+CGG | - | chr1_2:37351185-37351204 | None:intergenic | 25.0% |
| !! | AAAAAACTTGTGTCCTTTTA+AGG | + | chr1_2:37351539-37351558 | Msa0069160:intron | 25.0% |
| ! | GTTATGGAAAAAGGAATATA+TGG | + | chr1_2:37351954-37351973 | Msa0069160:intron | 25.0% |
| ! | AAAGTTAAGATCATCTTCAA+TGG | + | chr1_2:37352195-37352214 | Msa0069160:intron | 25.0% |
| !! | ACATTTTTAATGAGGACAAA+TGG | - | chr1_2:37352336-37352355 | None:intergenic | 25.0% |
| ! | AACCTTCTTTCTAAATCTAA+TGG | - | chr1_2:37352474-37352493 | None:intergenic | 25.0% |
| !!! | TTTAGAAAGAAGGTTTTGAA+TGG | + | chr1_2:37352479-37352498 | Msa0069160:intron | 25.0% |
| ! | TAATAATATACCATCCTAGT+GGG | - | chr1_2:37352527-37352546 | None:intergenic | 25.0% |
| ! | TTAATAATATACCATCCTAG+TGG | - | chr1_2:37352528-37352547 | None:intergenic | 25.0% |
| ! | CTAGGATGGTATATTATTAA+AGG | + | chr1_2:37352528-37352547 | Msa0069160:intron | 25.0% |
| !!! | AAATGTTAAGAGTATTGAGT+CGG | + | chr1_2:37352792-37352811 | Msa0069160:intron | 25.0% |
| ! | TAGAGATTAAAGGCAAAATA+AGG | + | chr1_2:37352984-37353003 | Msa0069160:CDS | 25.0% |
| !! | TTATGAAAAGCATAGAAAGA+TGG | + | chr1_2:37353177-37353196 | Msa0069160:CDS | 25.0% |
| ! | TATAGTAGAAGTAAAACCAA+AGG | + | chr1_2:37353405-37353424 | Msa0069160:three_prime_UTR | 25.0% |
| ! | TAAAAAATTGCCTTTACCTT+TGG | - | chr1_2:37353424-37353443 | None:intergenic | 25.0% |
| ! | ATGTGTGTTTTGCTTGATAT+AGG | - | chr1_2:37350207-37350226 | None:intergenic | 30.0% |
| TCCAATTGGTATTTAGGAAA+TGG | - | chr1_2:37350244-37350263 | None:intergenic | 30.0% | |
| TACGATTCACAAAATCCAAT+TGG | - | chr1_2:37350258-37350277 | None:intergenic | 30.0% | |
| !!! | ATTTTTGAAACACAATCCTC+CGG | - | chr1_2:37350341-37350360 | None:intergenic | 30.0% |
| TGATGCATGTAATTTCTCAA+TGG | + | chr1_2:37350382-37350401 | Msa0069160:CDS | 30.0% | |
| TGTAATTGAAACTATGTTGG+AGG | - | chr1_2:37350604-37350623 | None:intergenic | 30.0% | |
| CAAGAGAATTGTCAATAACA+TGG | + | chr1_2:37350832-37350851 | Msa0069160:CDS | 30.0% | |
| ! | AATTTGTGTTATTAACGTGC+AGG | - | chr1_2:37350985-37351004 | None:intergenic | 30.0% |
| TCTTAACATGTGTCCTTAAA+AGG | - | chr1_2:37351555-37351574 | None:intergenic | 30.0% | |
| !! | TTCTTAACTTGTTCTCCTAT+AGG | + | chr1_2:37351718-37351737 | Msa0069160:intron | 30.0% |
| !! | TCTTAACTTGTTCTCCTATA+GGG | + | chr1_2:37351719-37351738 | Msa0069160:intron | 30.0% |
| !!! | CCATTTTTTAATGGGTCATA+AGG | - | chr1_2:37351779-37351798 | None:intergenic | 30.0% |
| CCTTATGACCCATTAAAAAA+TGG | + | chr1_2:37351776-37351795 | Msa0069160:intron | 30.0% | |
| AAAATGGGTCAAAGATAAAG+CGG | - | chr1_2:37351827-37351846 | None:intergenic | 30.0% | |
| ATAACTAGTCAACTTACGTT+AGG | - | chr1_2:37351939-37351958 | None:intergenic | 30.0% | |
| ! | TAACGTAAGTTGACTAGTTA+TGG | + | chr1_2:37351938-37351957 | Msa0069160:intron | 30.0% |
| ! | AGTTGACTAGTTATGGAAAA+AGG | + | chr1_2:37351945-37351964 | Msa0069160:intron | 30.0% |
| ! | TTTTAATGAGGACAAATGGT+GGG | - | chr1_2:37352332-37352351 | None:intergenic | 30.0% |
| ! | TTTTTAATGAGGACAAATGG+TGG | - | chr1_2:37352333-37352352 | None:intergenic | 30.0% |
| TTTAAACCATTTGTCCTCAA+TGG | + | chr1_2:37352359-37352378 | Msa0069160:intron | 30.0% | |
| TTCTTTCTAAATCTAATGGC+TGG | - | chr1_2:37352470-37352489 | None:intergenic | 30.0% | |
| AGCCATTAGATTTAGAAAGA+AGG | + | chr1_2:37352469-37352488 | Msa0069160:intron | 30.0% | |
| !! | ATGGAAATAGTCGTCATTTT+TGG | - | chr1_2:37352863-37352882 | None:intergenic | 30.0% |
| AATGACGACTATTTCCATTT+CGG | + | chr1_2:37352865-37352884 | Msa0069160:intron | 30.0% | |
| TTTGTACAATAAATACGAGG+AGG | + | chr1_2:37353144-37353163 | Msa0069160:CDS | 30.0% | |
| ! | AAATTCGAGTTCCATCTAAA+AGG | + | chr1_2:37353230-37353249 | Msa0069160:CDS | 30.0% |
| ! | AATTCGAGTTCCATCTAAAA+GGG | + | chr1_2:37353231-37353250 | Msa0069160:CDS | 30.0% |
| AGAAGTAAAACCAAAGGTAA+AGG | + | chr1_2:37353411-37353430 | Msa0069160:three_prime_UTR | 30.0% | |
| !!! | ATGGTAGGTGTCATTTTTGA+AGG | - | chr1_2:37350176-37350195 | None:intergenic | 35.0% |
| ATATAGGCAAATTCGATGGT+AGG | - | chr1_2:37350191-37350210 | None:intergenic | 35.0% | |
| CTTGATATAGGCAAATTCGA+TGG | - | chr1_2:37350195-37350214 | None:intergenic | 35.0% | |
| TTAGGAAATGGCTCATCTTA+TGG | - | chr1_2:37350232-37350251 | None:intergenic | 35.0% | |
| GCCATTTCCTAAATACCAAT+TGG | + | chr1_2:37350240-37350259 | Msa0069160:five_prime_UTR | 35.0% | |
| GAGAAATTACATGCATCAAG+TGG | - | chr1_2:37350380-37350399 | None:intergenic | 35.0% | |
| ATGATGTCTTCATAGTCAGA+GGG | - | chr1_2:37350464-37350483 | None:intergenic | 35.0% | |
| AATGATGTCTTCATAGTCAG+AGG | - | chr1_2:37350465-37350484 | None:intergenic | 35.0% | |
| AGAAGAAGATTGTAGAGTGA+GGG | - | chr1_2:37350504-37350523 | None:intergenic | 35.0% | |
| AAGAAGAAGATTGTAGAGTG+AGG | - | chr1_2:37350505-37350524 | None:intergenic | 35.0% | |
| AATTGAAACTATGTTGGAGG+TGG | - | chr1_2:37350601-37350620 | None:intergenic | 35.0% | |
| CAATGAGTTTGACAGAATCA+TGG | + | chr1_2:37350657-37350676 | Msa0069160:intron | 35.0% | |
| ! | TAGTTTTTGCAAAATCACGG+TGG | + | chr1_2:37350691-37350710 | Msa0069160:intron | 35.0% |
| TTGACAATTCTCTTGCAGAT+AGG | - | chr1_2:37350827-37350846 | None:intergenic | 35.0% | |
| GGAGTAATGATCCATTGTAT+TGG | + | chr1_2:37350853-37350872 | Msa0069160:CDS | 35.0% | |
| AAGCAAGTTTACCTTGATTC+AGG | - | chr1_2:37350894-37350913 | None:intergenic | 35.0% | |
| GATGATGTAAGCAAGATATG+TGG | - | chr1_2:37351135-37351154 | None:intergenic | 35.0% | |
| GACATGCATGCAAACAAAAT+AGG | - | chr1_2:37351205-37351224 | None:intergenic | 35.0% | |
| !!! | CCACGTTTTAATTAAGGTGT+CGG | - | chr1_2:37351301-37351320 | None:intergenic | 35.0% |
| CGACACCTTAATTAAAACGT+GGG | + | chr1_2:37351299-37351318 | Msa0069160:intron | 35.0% | |
| !!! | ATCCTCCCACGTTTTAATTA+AGG | - | chr1_2:37351307-37351326 | None:intergenic | 35.0% |
| TTAATTAAAACGTGGGAGGA+TGG | + | chr1_2:37351306-37351325 | Msa0069160:intron | 35.0% | |
| TAATTAAAACGTGGGAGGAT+GGG | + | chr1_2:37351307-37351326 | Msa0069160:intron | 35.0% | |
| ACTTTAAGTCACAAGTTAGC+AGG | + | chr1_2:37351397-37351416 | Msa0069160:intron | 35.0% | |
| !!! | TTAAATTTTAGAGTGCTCGG+TGG | + | chr1_2:37352271-37352290 | Msa0069160:intron | 35.0% |
| TTTAATGAGGACAAATGGTG+GGG | - | chr1_2:37352331-37352350 | None:intergenic | 35.0% | |
| !!! | AAAGAAGGTTTTGAATGGCA+TGG | + | chr1_2:37352484-37352503 | Msa0069160:intron | 35.0% |
| !!! | AAAGGGTGTTTTTGTCATGA+AGG | + | chr1_2:37352546-37352565 | Msa0069160:intron | 35.0% |
| TATTTCCATTTCGGATCCAA+TGG | + | chr1_2:37352874-37352893 | Msa0069160:intron | 35.0% | |
| AAAAACCATTGGATCCGAAA+TGG | - | chr1_2:37352882-37352901 | None:intergenic | 35.0% | |
| TAAACAACGTAAGTCGTGTT+TGG | - | chr1_2:37353025-37353044 | None:intergenic | 35.0% | |
| CGTTGTTTATCTCATCACAA+AGG | + | chr1_2:37353036-37353055 | Msa0069160:CDS | 35.0% | |
| AAGGTTTCACATCGTATGTA+CGG | + | chr1_2:37353055-37353074 | Msa0069160:CDS | 35.0% | |
| ! | GAAAAGCATAGAAAGATGGA+AGG | + | chr1_2:37353181-37353200 | Msa0069160:CDS | 35.0% |
| TTCCATCTAAAAGGGATGAT+GGG | + | chr1_2:37353239-37353258 | Msa0069160:CDS | 35.0% | |
| ! | GAATTGGGTGAATTTTTCTG+TGG | + | chr1_2:37353274-37353293 | Msa0069160:CDS | 35.0% |
| ! | GAGGTTGGTTATAGATTGAA+GGG | + | chr1_2:37353331-37353350 | Msa0069160:CDS | 35.0% |
| AATCTCGAAGCAAACCACAT+AGG | + | chr1_2:37350277-37350296 | Msa0069160:five_prime_UTR | 40.0% | |
| AATTGCCATATGTGCCTATG+TGG | - | chr1_2:37350294-37350313 | None:intergenic | 40.0% | |
| GAAGAAGATTGTAGAGTGAG+GGG | - | chr1_2:37350503-37350522 | None:intergenic | 40.0% | |
| ! | GGTGGATTCTACTTACTATG+TGG | - | chr1_2:37350583-37350602 | None:intergenic | 40.0% |
| ATGATCCATTGTATTGGAGC+TGG | + | chr1_2:37350859-37350878 | Msa0069160:CDS | 40.0% | |
| CCGACACCTTAATTAAAACG+TGG | + | chr1_2:37351298-37351317 | Msa0069160:intron | 40.0% | |
| CACCTTAATTAAAACGTGGG+AGG | + | chr1_2:37351302-37351321 | Msa0069160:intron | 40.0% | |
| ! | CGAAATAACTTGTGCCCTAT+AGG | - | chr1_2:37351736-37351755 | None:intergenic | 40.0% |
| !! | TCGTTTTAGTCCTGAACTTG+TGG | + | chr1_2:37351753-37351772 | Msa0069160:intron | 40.0% |
| AAAATGTAGTCTCCTACCGT+AGG | - | chr1_2:37352417-37352436 | None:intergenic | 40.0% | |
| ATGCTGGTGGTAACATTGTT+GGG | - | chr1_2:37352603-37352622 | None:intergenic | 40.0% | |
| ATCAATCGAAGAATCTCACG+AGG | - | chr1_2:37352665-37352684 | None:intergenic | 40.0% | |
| !! | TGTTAAGAGTATTGAGTCGG+AGG | + | chr1_2:37352795-37352814 | Msa0069160:intron | 40.0% |
| GCGAATCTGCAGTATCATTA+AGG | - | chr1_2:37352932-37352951 | None:intergenic | 40.0% | |
| GTGAGCTGGTTAGAGATTAA+AGG | + | chr1_2:37352974-37352993 | Msa0069160:CDS | 40.0% | |
| ATGGCCAACAAAGTGCAAAA+TGG | + | chr1_2:37353112-37353131 | Msa0069160:CDS | 40.0% | |
| TGGCCAACAAAGTGCAAAAT+GGG | + | chr1_2:37353113-37353132 | Msa0069160:CDS | 40.0% | |
| ! | CATCCCATTTTGCACTTTGT+TGG | - | chr1_2:37353119-37353138 | None:intergenic | 40.0% |
| CAACAAAGTGCAAAATGGGA+TGG | + | chr1_2:37353117-37353136 | Msa0069160:CDS | 40.0% | |
| GTTCCATCTAAAAGGGATGA+TGG | + | chr1_2:37353238-37353257 | Msa0069160:CDS | 40.0% | |
| TGGGTGGATGGAAATTGAAT+TGG | + | chr1_2:37353258-37353277 | Msa0069160:CDS | 40.0% | |
| GGGTGGATGGAAATTGAATT+GGG | + | chr1_2:37353259-37353278 | Msa0069160:CDS | 40.0% | |
| TTTCTGTGGTGAAGTTGACA+TGG | + | chr1_2:37353288-37353307 | Msa0069160:CDS | 40.0% | |
| GGAGGTTAAGATGAGTGTTA+TGG | + | chr1_2:37353309-37353328 | Msa0069160:CDS | 40.0% | |
| GGTTAAGATGAGTGTTATGG+AGG | + | chr1_2:37353312-37353331 | Msa0069160:CDS | 40.0% | |
| AAGATGAGTGTTATGGAGGT+TGG | + | chr1_2:37353316-37353335 | Msa0069160:CDS | 40.0% | |
| ! | GGAGGTTGGTTATAGATTGA+AGG | + | chr1_2:37353330-37353349 | Msa0069160:CDS | 40.0% |
| GTTGGTTATAGATTGAAGGG+TGG | + | chr1_2:37353334-37353353 | Msa0069160:CDS | 40.0% | |
| GCAAACCACATAGGCACATA+TGG | + | chr1_2:37350286-37350305 | Msa0069160:exon | 45.0% | |
| CTCCAACATAGATACTCTGC+CGG | + | chr1_2:37350319-37350338 | Msa0069160:CDS | 45.0% | |
| AGCTGCTGAATGCAAAGTTG+AGG | - | chr1_2:37350411-37350430 | None:intergenic | 45.0% | |
| CAGCTAACTCTGACTCACTT+TGG | + | chr1_2:37350426-37350445 | Msa0069160:CDS | 45.0% | |
| TTGTAGAGTGAGGGGATTGA+GGG | - | chr1_2:37350495-37350514 | None:intergenic | 45.0% | |
| ATTGTAGAGTGAGGGGATTG+AGG | - | chr1_2:37350496-37350515 | None:intergenic | 45.0% | |
| TGTCTAAGAGCAGAGGTTGT+TGG | - | chr1_2:37350556-37350575 | None:intergenic | 45.0% | |
| AACAACCTCTGCTCTTAGAC+AGG | + | chr1_2:37350555-37350574 | Msa0069160:CDS | 45.0% | |
| GATCTCCAGCTCCAATACAA+TGG | - | chr1_2:37350867-37350886 | None:intergenic | 45.0% | |
| GGAGATCATCTCCTGAATCA+AGG | + | chr1_2:37350880-37350899 | Msa0069160:CDS | 45.0% | |
| !!! | TTTTAGAGTGCTCGGTGGAT+TGG | + | chr1_2:37352276-37352295 | Msa0069160:intron | 45.0% |
| CTAGGGTAGGCAACCTTAAT+GGG | + | chr1_2:37352388-37352407 | Msa0069160:intron | 45.0% | |
| ! | CAACCTTAATGGGTCTCCTA+CGG | + | chr1_2:37352398-37352417 | Msa0069160:intron | 45.0% |
| GTGGTAACATTGTTGGGGAA+GGG | - | chr1_2:37352597-37352616 | None:intergenic | 45.0% | |
| TGCTGGTGGTAACATTGTTG+GGG | - | chr1_2:37352602-37352621 | None:intergenic | 45.0% | |
| GATGCTGGTGGTAACATTGT+TGG | - | chr1_2:37352604-37352623 | None:intergenic | 45.0% | |
| AAGAATCTCACGAGGATGCT+GGG | - | chr1_2:37352657-37352676 | None:intergenic | 45.0% | |
| ATGATACTGCAGATTCGCAG+AGG | + | chr1_2:37352934-37352953 | Msa0069160:intron | 45.0% | |
| ATTGCAACTGATACCTCAGC+TGG | - | chr1_2:37353094-37353113 | None:intergenic | 45.0% | |
| ! | AGCTGAGGTATCAGTTGCAA+TGG | + | chr1_2:37353093-37353112 | Msa0069160:CDS | 45.0% |
| ! | CACCCATCATCCCTTTTAGA+TGG | - | chr1_2:37353244-37353263 | None:intergenic | 45.0% |
| !! | CATCTAAAAGGGATGATGGG+TGG | + | chr1_2:37353242-37353261 | Msa0069160:CDS | 45.0% |
| !! | TAAAAGGGATGATGGGTGGA+TGG | + | chr1_2:37353246-37353265 | Msa0069160:CDS | 45.0% |
| !!! | AAATATGTTAATATTTTTTT+AGG | + | chr1_2:37352049-37352068 | Msa0069160:intron | 5.0% |
| !!! | AATATGTTAATATTTTTTTA+GGG | + | chr1_2:37352050-37352069 | Msa0069160:intron | 5.0% |
| ! | CTCCGGCAGAGTATCTATGT+TGG | - | chr1_2:37350324-37350343 | None:intergenic | 50.0% |
| CAACATAGATACTCTGCCGG+AGG | + | chr1_2:37350322-37350341 | Msa0069160:CDS | 50.0% | |
| TAAAACGTGGGAGGATGGGA+TGG | + | chr1_2:37351311-37351330 | Msa0069160:intron | 50.0% | |
| AAAACGTGGGAGGATGGGAT+GGG | + | chr1_2:37351312-37351331 | Msa0069160:intron | 50.0% | |
| GGTCATAAGGCCACAAGTTC+AGG | - | chr1_2:37351766-37351785 | None:intergenic | 50.0% | |
| CCAACGCCATTGAGGACAAA+TGG | - | chr1_2:37352368-37352387 | None:intergenic | 50.0% | |
| CCATTTGTCCTCAATGGCGT+TGG | + | chr1_2:37352365-37352384 | Msa0069160:intron | 50.0% | |
| GCTAGGGTAGGCAACCTTAA+TGG | + | chr1_2:37352387-37352406 | Msa0069160:intron | 50.0% | |
| CTACCGTAGGAGACCCATTA+AGG | - | chr1_2:37352404-37352423 | None:intergenic | 50.0% | |
| ! | CTTAATGGGTCTCCTACGGT+AGG | + | chr1_2:37352402-37352421 | Msa0069160:intron | 50.0% |
| TGTTTGCAGCATGACCCACT+AGG | + | chr1_2:37352510-37352529 | Msa0069160:intron | 50.0% | |
| CATTGTTGGGGAAGGGAACT+AGG | - | chr1_2:37352590-37352609 | None:intergenic | 50.0% | |
| GGTGGTAACATTGTTGGGGA+AGG | - | chr1_2:37352598-37352617 | None:intergenic | 50.0% | |
| GGGAATGTATGCAGCTTGCA+AGG | - | chr1_2:37352637-37352656 | None:intergenic | 50.0% | |
| GAAGAATCTCACGAGGATGC+TGG | - | chr1_2:37352658-37352677 | None:intergenic | 50.0% | |
| ATACTGCAGATTCGCAGAGG+TGG | + | chr1_2:37352937-37352956 | Msa0069160:intron | 50.0% | |
| CTGAGGTAAGAACAGTGAGC+TGG | + | chr1_2:37352960-37352979 | Msa0069160:CDS | 50.0% | |
| CTGTGGTGAAGTTGACATGG+AGG | + | chr1_2:37353291-37353310 | Msa0069160:CDS | 50.0% | |
| AAGGGTGGTCTCATCGTTGA+AGG | + | chr1_2:37353349-37353368 | Msa0069160:CDS | 50.0% | |
| TGGCTCCTGTCTAAGAGCAG+AGG | - | chr1_2:37350563-37350582 | None:intergenic | 55.0% | |
| !! | TGTCCTCAATGGCGTTGGCT+AGG | + | chr1_2:37352370-37352389 | Msa0069160:intron | 55.0% |
| !! | GTCCTCAATGGCGTTGGCTA+GGG | + | chr1_2:37352371-37352390 | Msa0069160:intron | 55.0% |
| TACCCTAGCCAACGCCATTG+AGG | - | chr1_2:37352376-37352395 | None:intergenic | 55.0% | |
| !! | TCAATGGCGTTGGCTAGGGT+AGG | + | chr1_2:37352375-37352394 | Msa0069160:intron | 55.0% |
| TGCAGCATGACCCACTAGGA+TGG | + | chr1_2:37352514-37352533 | Msa0069160:intron | 55.0% | |
| CAAGGAACACACGAGGATGC+TGG | - | chr1_2:37352619-37352638 | None:intergenic | 55.0% | |
| CAGCTTGCAAGGAACACACG+AGG | - | chr1_2:37352626-37352645 | None:intergenic | 55.0% | |
| ACTTGATTCTGCGCCAGCTG+AGG | + | chr1_2:37353078-37353097 | Msa0069160:CDS | 55.0% | |
| GGAACACACGAGGATGCTGG+TGG | - | chr1_2:37352616-37352635 | None:intergenic | 60.0% | |
| CAGATTCGCAGAGGTGGCTG+AGG | + | chr1_2:37352943-37352962 | Msa0069160:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 37350142 | 37353507 | 37350142 | ID=Msa0069160;Name=Msa0069160 |
| chr1_2 | mRNA | 37350142 | 37353507 | 37350142 | ID=Msa0069160-mRNA-1;Parent=Msa0069160;Name=Msa0069160-mRNA-1;_AED=0.04;_eAED=0.04;_QI=163|1|1|1|1|1|3|114|282 |
| chr1_2 | exon | 37350142 | 37350586 | 37350142 | ID=Msa0069160-mRNA-1:exon:11720;Parent=Msa0069160-mRNA-1 |
| chr1_2 | exon | 37350783 | 37350901 | 37350783 | ID=Msa0069160-mRNA-1:exon:11721;Parent=Msa0069160-mRNA-1 |
| chr1_2 | exon | 37352946 | 37353507 | 37352946 | ID=Msa0069160-mRNA-1:exon:11722;Parent=Msa0069160-mRNA-1 |
| chr1_2 | five_prime_UTR | 37350142 | 37350304 | 37350142 | ID=Msa0069160-mRNA-1:five_prime_utr;Parent=Msa0069160-mRNA-1 |
| chr1_2 | CDS | 37350305 | 37350586 | 37350305 | ID=Msa0069160-mRNA-1:cds;Parent=Msa0069160-mRNA-1 |
| chr1_2 | CDS | 37350783 | 37350901 | 37350783 | ID=Msa0069160-mRNA-1:cds;Parent=Msa0069160-mRNA-1 |
| chr1_2 | CDS | 37352946 | 37353393 | 37352946 | ID=Msa0069160-mRNA-1:cds;Parent=Msa0069160-mRNA-1 |
| chr1_2 | three_prime_UTR | 37353394 | 37353507 | 37353394 | ID=Msa0069160-mRNA-1:three_prime_utr;Parent=Msa0069160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
