Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337850 | XP_003610217.1 | 96.475 | 851 | 20 | 2 | 1 | 847 | 1 | 845 | 0.0 | 1699 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337850 | sp|Q9ZV48|TPS11_ARATH | 66.456 | 790 | 252 | 6 | 61 | 840 | 49 | 835 | 0.0 | 1109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337850 | G7JEA0 | 96.475 | 851 | 20 | 2 | 1 | 847 | 1 | 845 | 0.0 | 1699 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004480 | Msa1337850 | 0.802366 | 5.805075e-49 | -8.615850e-47 |
| Msa0032710 | Msa1337850 | 0.824192 | 9.222828e-54 | -8.615850e-47 |
| Msa0033840 | Msa1337850 | -0.822869 | 1.880956e-53 | -8.615850e-47 |
| Msa0037180 | Msa1337850 | 0.801464 | 8.894171e-49 | -8.615850e-47 |
| Msa0043850 | Msa1337850 | 0.817964 | 2.508744e-52 | -8.615850e-47 |
| Msa0053640 | Msa1337850 | 0.815470 | 9.094952e-52 | -8.615850e-47 |
| Msa0067590 | Msa1337850 | -0.826616 | 2.459731e-54 | -8.615850e-47 |
| Msa0069160 | Msa1337850 | 0.817547 | 3.116233e-52 | -8.615850e-47 |
| Msa0081610 | Msa1337850 | -0.832932 | 7.126005e-56 | -8.615850e-47 |
| Msa0090510 | Msa1337850 | 0.834969 | 2.203454e-56 | -8.615850e-47 |
| Msa0097570 | Msa1337850 | 0.806428 | 8.265188e-50 | -8.615850e-47 |
| Msa0610760 | Msa1337850 | 0.822295 | 2.557101e-53 | -8.615850e-47 |
| Msa0617170 | Msa1337850 | 0.811212 | 7.839410e-51 | -8.615850e-47 |
| Msa0626920 | Msa1337850 | 0.823437 | 1.385965e-53 | -8.615850e-47 |
| Msa0632420 | Msa1337850 | 0.831319 | 1.786037e-55 | -8.615850e-47 |
| Msa0639110 | Msa1337850 | 0.807353 | 5.268487e-50 | -8.615850e-47 |
| Msa0651560 | Msa1337850 | 0.806433 | 8.245797e-50 | -8.615850e-47 |
| Msa0671170 | Msa1337850 | 0.824976 | 6.026308e-54 | -8.615850e-47 |
| Msa0671210 | Msa1337850 | 0.824611 | 7.350797e-54 | -8.615850e-47 |
| Msa0693340 | Msa1337850 | -0.834006 | 3.847017e-56 | -8.615850e-47 |
| Msa0693470 | Msa1337850 | 0.803755 | 2.996540e-49 | -8.615850e-47 |
| Msa0697680 | Msa1337850 | 0.831857 | 1.315643e-55 | -8.615850e-47 |
| Msa0699980 | Msa1337850 | 0.816002 | 6.922932e-52 | -8.615850e-47 |
| Msa0709120 | Msa1337850 | 0.820836 | 5.558234e-53 | -8.615850e-47 |
| Msa0735550 | Msa1337850 | 0.817416 | 3.335073e-52 | -8.615850e-47 |
| Msa0796580 | Msa1337850 | -0.826583 | 2.505241e-54 | -8.615850e-47 |
| Msa0798450 | Msa1337850 | 0.801765 | 7.715567e-49 | -8.615850e-47 |
| Msa0832760 | Msa1337850 | 0.821230 | 4.509721e-53 | -8.615850e-47 |
| Msa0137980 | Msa1337850 | 0.823041 | 1.714587e-53 | -8.615850e-47 |
| Msa0138900 | Msa1337850 | 0.803029 | 4.236499e-49 | -8.615850e-47 |
| Msa0138990 | Msa1337850 | -0.803099 | 4.097570e-49 | -8.615850e-47 |
| Msa0139670 | Msa1337850 | 0.818654 | 1.751095e-52 | -8.615850e-47 |
| Msa0143630 | Msa1337850 | 0.827598 | 1.431928e-54 | -8.615850e-47 |
| Msa0172830 | Msa1337850 | 0.807534 | 4.823462e-50 | -8.615850e-47 |
| Msa0173950 | Msa1337850 | -0.828190 | 1.031641e-54 | -8.615850e-47 |
| Msa0177320 | Msa1337850 | 0.822870 | 1.879051e-53 | -8.615850e-47 |
| Msa0183910 | Msa1337850 | 0.829472 | 5.049344e-55 | -8.615850e-47 |
| Msa0220990 | Msa1337850 | 0.855164 | 7.581904e-62 | -8.615850e-47 |
| Msa0224130 | Msa1337850 | 0.809979 | 1.447408e-50 | -8.615850e-47 |
| Msa0233920 | Msa1337850 | 0.836433 | 9.386058e-57 | -8.615850e-47 |
| Msa1229480 | Msa1337850 | 0.803256 | 3.801694e-49 | -8.615850e-47 |
| Msa1234620 | Msa1337850 | 0.817593 | 3.043098e-52 | -8.615850e-47 |
| Msa1249600 | Msa1337850 | 0.829857 | 4.071593e-55 | -8.615850e-47 |
| Msa1252000 | Msa1337850 | 0.817812 | 2.714913e-52 | -8.615850e-47 |
| Msa1257570 | Msa1337850 | 0.813752 | 2.183430e-51 | -8.615850e-47 |
| Msa1265020 | Msa1337850 | 0.960541 | 1.129523e-118 | -8.615850e-47 |
| Msa1265520 | Msa1337850 | -0.804733 | 1.875126e-49 | -8.615850e-47 |
| Msa1290900 | Msa1337850 | 0.844920 | 5.604821e-59 | -8.615850e-47 |
| Msa1312770 | Msa1337850 | 0.801889 | 7.276636e-49 | -8.615850e-47 |
| Msa1331300 | Msa1337850 | 0.822920 | 1.829561e-53 | -8.615850e-47 |
| Msa1337850 | Msa1340200 | 0.803218 | 3.871785e-49 | -8.615850e-47 |
| Msa1337850 | Msa1366390 | 0.800584 | 1.346050e-48 | -8.615850e-47 |
| Msa1337850 | Msa1383630 | 0.822583 | 2.192399e-53 | -8.615850e-47 |
| Msa1337850 | Msa1385970 | 0.838332 | 3.062037e-57 | -8.615850e-47 |
| Msa1337850 | Msa1417110 | 0.835795 | 1.362450e-56 | -8.615850e-47 |
| Msa1337850 | Msa1433870 | 0.809752 | 1.620021e-50 | -8.615850e-47 |
| Msa1337850 | Msa1434090 | 0.804346 | 2.257765e-49 | -8.615850e-47 |
| Msa1337850 | Msa1437520 | 0.819730 | 9.960193e-53 | -8.615850e-47 |
| Msa0389080 | Msa1337850 | -0.800848 | 1.188753e-48 | -8.615850e-47 |
| Msa0474650 | Msa1337850 | -0.801402 | 9.159650e-49 | -8.615850e-47 |
| Msa0481310 | Msa1337850 | 0.821881 | 3.189932e-53 | -8.615850e-47 |
| Msa1044510 | Msa1337850 | 0.815380 | 9.523691e-52 | -8.615850e-47 |
| Msa1070540 | Msa1337850 | 0.803956 | 2.721214e-49 | -8.615850e-47 |
| Msa1087890 | Msa1337850 | 0.843568 | 1.293269e-58 | -8.615850e-47 |
| Msa1101240 | Msa1337850 | 0.802006 | 6.884961e-49 | -8.615850e-47 |
| Msa0257490 | Msa1337850 | 0.801177 | 1.018363e-48 | -8.615850e-47 |
| Msa0265270 | Msa1337850 | 0.808066 | 3.717289e-50 | -8.615850e-47 |
| Msa0300280 | Msa1337850 | 0.827039 | 1.949245e-54 | -8.615850e-47 |
| Msa0312640 | Msa1337850 | 0.875293 | 3.453948e-68 | -8.615850e-47 |
| Msa0337710 | Msa1337850 | 0.807367 | 5.233203e-50 | -8.615850e-47 |
| Msa1169910 | Msa1337850 | 0.801660 | 8.106253e-49 | -8.615850e-47 |
| Msa1173150 | Msa1337850 | 0.802219 | 6.224659e-49 | -8.615850e-47 |
| Msa1188350 | Msa1337850 | 0.803089 | 4.117281e-49 | -8.615850e-47 |
| Msa1193910 | Msa1337850 | 0.803466 | 3.439563e-49 | -8.615850e-47 |
| Msa1207330 | Msa1337850 | 0.820776 | 5.735221e-53 | -8.615850e-47 |
| Msa1221630 | Msa1337850 | 0.941650 | 2.875670e-101 | -8.615850e-47 |
| Msa1221960 | Msa1337850 | 0.935649 | 6.086285e-97 | -8.615850e-47 |
| Msa0536350 | Msa1337850 | 0.828650 | 7.991551e-55 | -8.615850e-47 |
| Msa0560460 | Msa1337850 | 0.812053 | 5.145525e-51 | -8.615850e-47 |
| Msa0580850 | Msa1337850 | 0.816041 | 6.783906e-52 | -8.615850e-47 |
| Msa0592330 | Msa1337850 | 0.833051 | 6.659007e-56 | -8.615850e-47 |
| Msa0855110 | Msa1337850 | 0.822578 | 2.197598e-53 | -8.615850e-47 |
| Msa0933760 | Msa1337850 | 0.800886 | 1.167506e-48 | -8.615850e-47 |
| Msa0934140 | Msa1337850 | 0.818957 | 1.494746e-52 | -8.615850e-47 |
| Msa0944620 | Msa1337850 | 0.823314 | 1.480725e-53 | -8.615850e-47 |
| Msa0969380 | Msa1337850 | 0.880005 | 7.837669e-70 | -8.615850e-47 |
| Msa0969590 | Msa1337850 | 0.840458 | 8.590017e-58 | -8.615850e-47 |
| Msa0969720 | Msa1337850 | 0.870170 | 1.786019e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337850 | MtrunA17_Chr4g0073041 | 96.475 | 851 | 20 | 2 | 1 | 847 | 1 | 845 | 0.0 | 1699 |
| Msa1337850 | MtrunA17_Chr8g0364961 | 62.247 | 792 | 285 | 5 | 61 | 842 | 52 | 839 | 0.0 | 1041 |
| Msa1337850 | MtrunA17_Chr1g0209251 | 60.276 | 798 | 303 | 7 | 54 | 843 | 53 | 844 | 0.0 | 1004 |
| Msa1337850 | MtrunA17_Chr8g0391971 | 58.437 | 806 | 316 | 8 | 49 | 840 | 47 | 847 | 0.0 | 999 |
| Msa1337850 | MtrunA17_Chr1g0161531 | 59.023 | 798 | 308 | 8 | 61 | 844 | 61 | 853 | 0.0 | 991 |
| Msa1337850 | MtrunA17_Chr4g0041381 | 58.629 | 788 | 310 | 6 | 63 | 840 | 67 | 848 | 0.0 | 976 |
| Msa1337850 | MtrunA17_Chr3g0117891 | 53.316 | 754 | 340 | 6 | 83 | 830 | 5 | 752 | 0.0 | 810 |
| Msa1337850 | MtrunA17_Chr3g0107401 | 46.103 | 603 | 285 | 7 | 64 | 660 | 1 | 569 | 7.29e-172 | 509 |
| Msa1337850 | MtrunA17_Chr8g0359371 | 35.591 | 753 | 426 | 20 | 61 | 793 | 83 | 796 | 2.32e-136 | 429 |
| Msa1337850 | MtrunA17_Chr2g0314621 | 33.818 | 757 | 434 | 20 | 61 | 794 | 122 | 834 | 1.21e-132 | 420 |
| Msa1337850 | MtrunA17_Chr8g0380051 | 40.923 | 325 | 175 | 8 | 60 | 381 | 74 | 384 | 6.91e-70 | 238 |
| Msa1337850 | MtrunA17_Chr8g0380061 | 29.953 | 424 | 249 | 13 | 387 | 794 | 5 | 396 | 5.95e-50 | 184 |
| Msa1337850 | MtrunA17_Chr3g0107421 | 46.328 | 177 | 93 | 1 | 252 | 428 | 1 | 175 | 2.33e-45 | 160 |
| Msa1337850 | MtrunA17_Chr3g0107411 | 43.137 | 153 | 86 | 1 | 445 | 596 | 1 | 153 | 4.38e-39 | 142 |
| Msa1337850 | MtrunA17_Chr3g0116901 | 44.048 | 168 | 84 | 4 | 31 | 191 | 5 | 169 | 2.20e-35 | 132 |
| Msa1337850 | MtrunA17_Chr3g0107431 | 39.316 | 117 | 49 | 3 | 62 | 173 | 10 | 109 | 1.07e-18 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337850 | AT2G18700.1 | 66.456 | 790 | 252 | 6 | 61 | 840 | 49 | 835 | 0.0 | 1109 |
| Msa1337850 | AT1G23870.1 | 57.993 | 857 | 335 | 8 | 1 | 843 | 1 | 846 | 0.0 | 1039 |
| Msa1337850 | AT1G70290.1 | 57.615 | 847 | 337 | 9 | 1 | 837 | 1 | 835 | 0.0 | 1003 |
| Msa1337850 | AT1G60140.6 | 58.302 | 801 | 315 | 6 | 51 | 841 | 53 | 844 | 0.0 | 994 |
| Msa1337850 | AT1G60140.1 | 58.302 | 801 | 315 | 6 | 51 | 841 | 53 | 844 | 0.0 | 994 |
| Msa1337850 | AT1G60140.2 | 58.302 | 801 | 315 | 6 | 51 | 841 | 53 | 844 | 0.0 | 994 |
| Msa1337850 | AT1G60140.5 | 58.302 | 801 | 315 | 6 | 51 | 841 | 53 | 844 | 0.0 | 994 |
| Msa1337850 | AT1G60140.4 | 58.302 | 801 | 315 | 6 | 51 | 841 | 53 | 844 | 0.0 | 994 |
| Msa1337850 | AT4G17770.1 | 56.235 | 850 | 357 | 7 | 1 | 841 | 1 | 844 | 0.0 | 992 |
| Msa1337850 | AT4G17770.2 | 56.235 | 850 | 357 | 7 | 1 | 841 | 1 | 844 | 0.0 | 992 |
| Msa1337850 | AT1G06410.3 | 57.915 | 796 | 314 | 8 | 63 | 847 | 60 | 845 | 0.0 | 974 |
| Msa1337850 | AT1G06410.1 | 57.915 | 796 | 314 | 8 | 63 | 847 | 60 | 845 | 0.0 | 974 |
| Msa1337850 | AT1G06410.2 | 57.915 | 796 | 314 | 8 | 63 | 847 | 60 | 845 | 0.0 | 974 |
| Msa1337850 | AT1G68020.2 | 57.407 | 810 | 314 | 8 | 58 | 840 | 49 | 854 | 0.0 | 970 |
| Msa1337850 | AT1G68020.3 | 57.407 | 810 | 314 | 8 | 58 | 840 | 49 | 854 | 0.0 | 970 |
| Msa1337850 | AT1G70290.2 | 53.365 | 847 | 335 | 10 | 1 | 837 | 1 | 797 | 0.0 | 903 |
| Msa1337850 | AT1G60140.3 | 59.634 | 711 | 272 | 5 | 51 | 755 | 53 | 754 | 0.0 | 902 |
| Msa1337850 | AT1G68020.1 | 57.795 | 635 | 241 | 7 | 58 | 669 | 49 | 679 | 0.0 | 771 |
| Msa1337850 | AT1G78580.4 | 34.788 | 756 | 429 | 20 | 61 | 793 | 91 | 805 | 1.14e-134 | 425 |
| Msa1337850 | AT1G78580.1 | 34.788 | 756 | 429 | 20 | 61 | 793 | 91 | 805 | 1.14e-134 | 425 |
| Msa1337850 | AT1G78580.2 | 34.788 | 756 | 429 | 20 | 61 | 793 | 91 | 805 | 1.14e-134 | 425 |
| Msa1337850 | AT1G78580.3 | 34.788 | 756 | 429 | 20 | 61 | 793 | 91 | 805 | 1.14e-134 | 425 |
| Msa1337850 | AT1G16980.1 | 33.210 | 813 | 472 | 22 | 61 | 845 | 11 | 780 | 1.69e-134 | 421 |
| Msa1337850 | AT4G27550.2 | 31.790 | 821 | 472 | 20 | 61 | 836 | 3 | 780 | 2.99e-126 | 398 |
| Msa1337850 | AT4G27550.1 | 31.630 | 822 | 481 | 20 | 61 | 836 | 3 | 789 | 1.71e-125 | 396 |
| Msa1337850 | AT1G16980.2 | 34.326 | 638 | 362 | 17 | 59 | 682 | 9 | 603 | 8.18e-111 | 354 |
Find 177 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGGGAAGGTTCTGATTT+TGG | 0.120895 | tig0001526:-656378 | Msa1337850:CDS |
| CAAGAAGCAGATCCTGATTT+TGG | 0.199178 | tig0001526:-655094 | Msa1337850:CDS |
| CTTCAATAGGTTGTTTCATT+TGG | 0.210495 | tig0001526:-654295 | Msa1337850:three_prime_UTR |
| ATGATCCTGTAGTAGTTAAA+AGG | 0.228717 | tig0001526:-655021 | Msa1337850:CDS |
| ATTCTTCGTTTACGAGAAAT+TGG | 0.240051 | tig0001526:+657202 | None:intergenic |
| ATATTTGTCATTAACTTCTT+TGG | 0.249338 | tig0001526:+656181 | None:intergenic |
| AATATTGTCGTTGAAACTTC+TGG | 0.252033 | tig0001526:+657248 | None:intergenic |
| TGGAGGGGAATGAGAAATTA+AGG | 0.263134 | tig0001526:-656292 | Msa1337850:CDS |
| TTCTTCTTCTTCTTATCATA+TGG | 0.268648 | tig0001526:-657545 | Msa1337850:five_prime_UTR |
| CAAGTGTTTGCATGCACTAT+TGG | 0.286479 | tig0001526:-654475 | Msa1337850:CDS |
| TTTGGCATTGAGGAATCTTT+TGG | 0.299694 | tig0001526:-656312 | Msa1337850:CDS |
| TTCACTCAGCGGGGCGGTTC+GGG | 0.301816 | tig0001526:-655907 | Msa1337850:CDS |
| CTTGTGCCGCAATTGCTTCT+CGG | 0.303934 | tig0001526:+655821 | None:intergenic |
| TGCGTTTCAATTCTTCTCAT+TGG | 0.309786 | tig0001526:-656862 | Msa1337850:CDS |
| TTGGATTTGTTCAAAGGTAT+TGG | 0.319105 | tig0001526:-656344 | Msa1337850:CDS |
| CTCTCATGATGTAGCGTATT+GGG | 0.319624 | tig0001526:-655778 | Msa1337850:CDS |
| AAGTAGGGCTAAATACTATT+TGG | 0.326557 | tig0001526:-654443 | Msa1337850:CDS |
| GTTTCTGTAAGCATTATCTT+TGG | 0.328259 | tig0001526:-656928 | Msa1337850:CDS |
| AATTAACAAAGCTCCTAGTT+TGG | 0.333947 | tig0001526:-655547 | Msa1337850:CDS |
| GGTTCATGATTATCATCTAA+TGG | 0.338610 | tig0001526:-656762 | Msa1337850:CDS |
| TTCAATAGGTTGTTTCATTT+GGG | 0.341066 | tig0001526:-654294 | Msa1337850:three_prime_UTR |
| TGATAGATTCCTTCTTCAAT+AGG | 0.341279 | tig0001526:-654308 | Msa1337850:three_prime_UTR |
| TGGAACGGTGTCATCAGTTC+TGG | 0.343013 | tig0001526:+657268 | None:intergenic |
| AAAGAAGTTAATGACAAATA+TGG | 0.343946 | tig0001526:-656179 | Msa1337850:CDS |
| TGGATTTGTTCAAAGGTATT+GGG | 0.345683 | tig0001526:-656343 | Msa1337850:CDS |
| AGGCCAATTGTTTGTATAAA+CGG | 0.358705 | tig0001526:-656137 | Msa1337850:CDS |
| AATACAGTGTTCATTGTTAG+TGG | 0.360290 | tig0001526:-655483 | Msa1337850:CDS |
| ATGCTTTCAAGATCTTGTTT+AGG | 0.372241 | tig0001526:-657370 | Msa1337850:CDS |
| TTTAACTACTACAGGATCAT+TGG | 0.373736 | tig0001526:+655024 | None:intergenic |
| ATCATTGTTTCTGAGTTCAT+TGG | 0.382781 | tig0001526:-655939 | Msa1337850:CDS |
| TAGACAAGGAAGTGTTGAAT+TGG | 0.390593 | tig0001526:-656006 | Msa1337850:CDS |
| AAATACTATTTGGATGATAC+TGG | 0.392235 | tig0001526:-654433 | Msa1337850:CDS |
| GCTTGCCACAGTCCAAAATC+AGG | 0.397022 | tig0001526:+655082 | None:intergenic |
| CCTAGACATAGAAGAAAATC+TGG | 0.408487 | tig0001526:+654562 | None:intergenic |
| GCAACTTCTTCTTGTTGTGA+TGG | 0.411196 | tig0001526:+657025 | None:intergenic |
| ACTCATGAAATATTGCTGTT+AGG | 0.412723 | tig0001526:+654134 | None:intergenic |
| CTCAAGATATATGTGGGATT+AGG | 0.419772 | tig0001526:-655708 | Msa1337850:CDS |
| CTAAGTATTTCTTCACGAAC+AGG | 0.420112 | tig0001526:+656644 | None:intergenic |
| TCAGTTCTGGAACTATGTTT+AGG | 0.420500 | tig0001526:+657281 | None:intergenic |
| TTGTAGCAGGATGTTGGGTT+TGG | 0.421912 | tig0001526:-656555 | Msa1337850:CDS |
| CAGTGTTCATTGTTAGTGGC+AGG | 0.422219 | tig0001526:-655479 | Msa1337850:CDS |
| GACTGATGGCAGGTGGAGTA+AGG | 0.425232 | tig0001526:-655254 | Msa1337850:intron |
| GGACCGTTTATACAAACAAT+TGG | 0.426572 | tig0001526:+656134 | None:intergenic |
| CTTGTCCGCGAAGATTCTAT+TGG | 0.432787 | tig0001526:+656823 | None:intergenic |
| TGCCAATCCGAGAGTCGTCC+AGG | 0.433203 | tig0001526:+655225 | None:intergenic |
| GCCTTCTCCTGAGTCGAAAC+CGG | 0.435832 | tig0001526:+656113 | None:intergenic |
| TGATGGCACCATGATGCCTC+AGG | 0.435835 | tig0001526:-655574 | Msa1337850:CDS |
| AAATAGTATTTAGCCCTACT+TGG | 0.436019 | tig0001526:+654445 | None:intergenic |
| GTCTTGTTGTAGCAGGATGT+TGG | 0.445329 | tig0001526:-656561 | Msa1337850:CDS |
| TTGTTGAACTGTGATTTGAT+TGG | 0.446772 | tig0001526:-656617 | Msa1337850:CDS |
| TGATCCTGTAGTAGTTAAAA+GGG | 0.447623 | tig0001526:-655020 | Msa1337850:CDS |
| AAACGGTCCGGTTTCGACTC+AGG | 0.449305 | tig0001526:-656120 | Msa1337850:CDS |
| GTTGTTCGCCTTCACTCAGC+GGG | 0.449644 | tig0001526:-655917 | Msa1337850:CDS |
| CCACATGGGTCTTCTCGAAT+CGG | 0.450549 | tig0001526:-656453 | Msa1337850:CDS |
| TACATTGGTGTTGATTACTT+TGG | 0.450702 | tig0001526:-656512 | Msa1337850:CDS |
| TTGGAAAATTAATGTAGAAA+AGG | 0.451444 | tig0001526:-655191 | Msa1337850:CDS |
| AGGATTTAGAGAGAGCTTGT+AGG | 0.454660 | tig0001526:-655740 | Msa1337850:CDS |
| TCTTGTTGTAGCAGGATGTT+GGG | 0.455109 | tig0001526:-656560 | Msa1337850:CDS |
| GTATGACAAGGAATGAATAC+AGG | 0.455724 | tig0001526:-654182 | Msa1337850:three_prime_UTR |
| CTGTTCGTGAAGAAATACTT+AGG | 0.456072 | tig0001526:-656643 | Msa1337850:CDS |
| GTGATGAACAATCTGGGTAT+AGG | 0.457022 | tig0001526:-656157 | Msa1337850:CDS |
| TAAGAGGGTAAAAGAGTTGA+AGG | 0.457048 | tig0001526:-656408 | Msa1337850:CDS |
| GATGACTTGGATTTGTTCAA+AGG | 0.461719 | tig0001526:-656350 | Msa1337850:CDS |
| GCTCTCATGATGTAGCGTAT+TGG | 0.464849 | tig0001526:-655779 | Msa1337850:CDS |
| ATCCTGATGAAGATTATGTC+TGG | 0.470407 | tig0001526:-656784 | Msa1337850:CDS |
| GTTCTGTAGATTTCTGAAGT+AGG | 0.470644 | tig0001526:+656671 | None:intergenic |
| GGATTTAGAGAGAGCTTGTA+GGG | 0.471625 | tig0001526:-655739 | Msa1337850:CDS |
| AAATATGGTGATGAACAATC+TGG | 0.477180 | tig0001526:-656164 | Msa1337850:CDS |
| TTACGAGAAATTGGTGATGA+AGG | 0.479580 | tig0001526:+657211 | None:intergenic |
| AGAAGATTATGACTTATAAG+AGG | 0.480126 | tig0001526:+657573 | None:intergenic |
| CGTTGGTTCGTTAAAATCAC+AGG | 0.480855 | tig0001526:-657059 | Msa1337850:CDS |
| CCCCACAGGAAGAATCTTGA+TGG | 0.481795 | tig0001526:+656478 | None:intergenic |
| TTGTGACTTGAAATTCGAAT+GGG | 0.482906 | tig0001526:-657143 | Msa1337850:CDS |
| TTGGATTATGAGTCTAAAAG+AGG | 0.484605 | tig0001526:-656536 | Msa1337850:CDS |
| CTTGTGACTTGAAATTCGAA+TGG | 0.485275 | tig0001526:-657144 | Msa1337850:CDS |
| TGTGTTTATGTTTATGTGAG+TGG | 0.487769 | tig0001526:+657426 | None:intergenic |
| TGTTCACCTTGAGAGTATGC+TGG | 0.489913 | tig0001526:-655047 | Msa1337850:CDS |
| AATTGTTTGTATAAACGGTC+CGG | 0.492336 | tig0001526:-656132 | Msa1337850:CDS |
| CATCCTCTGAAACAGCTAAG+AGG | 0.493275 | tig0001526:-656424 | Msa1337850:CDS |
| TGGTCATGTTATCAGACTGC+TGG | 0.493365 | tig0001526:-654413 | Msa1337850:CDS |
| TGACTTCTCCTCATTCCTCA+TGG | 0.494550 | tig0001526:+654585 | None:intergenic |
| ATTAAGGGGTGAAGTTGTGT+TGG | 0.495890 | tig0001526:-656276 | Msa1337850:CDS |
| GTGTTCATTGTTAGTGGCAG+GGG | 0.498938 | tig0001526:-655477 | Msa1337850:CDS |
| AAACGTTTCCTCAAGTAAGT+TGG | 0.499254 | tig0001526:+656734 | None:intergenic |
| GAACTCAGCAATCAAAATGA+AGG | 0.499316 | tig0001526:-655847 | Msa1337850:CDS |
| TGGTGCCATCATAGTCCAAA+AGG | 0.499691 | tig0001526:+655586 | None:intergenic |
| TGTTCGTGAAGAAATACTTA+GGG | 0.500357 | tig0001526:-656642 | Msa1337850:CDS |
| ACCCAGACATAATCTTCATC+AGG | 0.502291 | tig0001526:+656782 | None:intergenic |
| GTAGAGTTTGCCTTAGCGAC+TGG | 0.503290 | tig0001526:-655455 | Msa1337850:CDS |
| GGAGGGGAATGAGAAATTAA+GGG | 0.505727 | tig0001526:-656291 | Msa1337850:CDS |
| GAAGGAAGAATTTGAAGGGA+AGG | 0.507012 | tig0001526:-656390 | Msa1337850:CDS |
| AAGTCACAAGAAGCGCGTAT+TGG | 0.516480 | tig0001526:+657157 | None:intergenic |
| CACTTGTGATGTGGTTGGTA+AGG | 0.520338 | tig0001526:+654492 | None:intergenic |
| AGTTGAAGGAAGAATTTGAA+GGG | 0.520703 | tig0001526:-656394 | Msa1337850:CDS |
| ATGAAACAACCTATTGAAGA+AGG | 0.522010 | tig0001526:+654299 | None:intergenic |
| TCCCTGGACGACTCTCGGAT+TGG | 0.522159 | tig0001526:-655227 | Msa1337850:CDS |
| TACCCTCTTAGCTGTTTCAG+AGG | 0.522937 | tig0001526:+656421 | None:intergenic |
| GTTGAATTGGACAAAGCCCT+TGG | 0.526550 | tig0001526:-655993 | Msa1337850:CDS |
| GATGAAGCGTTGTTGAGTAA+TGG | 0.528627 | tig0001526:+657489 | None:intergenic |
| GCGTTGTTGAGTAATGGAAA+TGG | 0.533209 | tig0001526:+657495 | None:intergenic |
| ATAGGTTGTTTCATTTGGGA+AGG | 0.533568 | tig0001526:-654290 | Msa1337850:three_prime_UTR |
| GGGCGGTTCGGGTGAATCCG+TGG | 0.535674 | tig0001526:-655896 | Msa1337850:CDS |
| ATTATAGATGAGTGTTGCAA+AGG | 0.536729 | tig0001526:+657464 | None:intergenic |
| TCTTCCTGTGGGGATCCACA+TGG | 0.539623 | tig0001526:-656468 | Msa1337850:CDS |
| GATTCTCCCTGGACGACTCT+CGG | 0.545192 | tig0001526:-655232 | Msa1337850:CDS |
| TTGTGAATGCTGTGAGGGAT+GGG | 0.545495 | tig0001526:-656061 | Msa1337850:CDS |
| ACCATCAAGATTCTTCCTGT+GGG | 0.546402 | tig0001526:-656479 | Msa1337850:CDS |
| GAGTTGAAGGAAGAATTTGA+AGG | 0.547674 | tig0001526:-656395 | Msa1337850:CDS |
| GAGTAGCGGAAAAGATATCC+AGG | 0.550385 | tig0001526:-656231 | Msa1337850:CDS |
| GCATTATCTCAAGATATATG+TGG | 0.551844 | tig0001526:-655715 | Msa1337850:CDS |
| ATGGAGAAAACCAGTCGCTA+AGG | 0.553868 | tig0001526:+655445 | None:intergenic |
| TACCATCAAGATTCTTCCTG+TGG | 0.554669 | tig0001526:-656480 | Msa1337850:CDS |
| TCCGGTTTCGACTCAGGAGA+AGG | 0.554779 | tig0001526:-656114 | Msa1337850:CDS |
| CTTCCTGTGGGGATCCACAT+GGG | 0.555318 | tig0001526:-656467 | Msa1337850:CDS |
| CTATTGGTTATAAACCAAGT+AGG | 0.558755 | tig0001526:-654459 | Msa1337850:CDS |
| TATTGTTGAAGTAAAACCTC+AGG | 0.563515 | tig0001526:-654990 | Msa1337850:intron |
| TGATGAAGGAAGTGAAAGGT+TGG | 0.568415 | tig0001526:+657225 | None:intergenic |
| CTACAAACAGTATACTCGTA+AGG | 0.570286 | tig0001526:+656026 | None:intergenic |
| CAATAGAATCTTCGCGGACA+AGG | 0.570323 | tig0001526:-656822 | Msa1337850:CDS |
| TCATTGGCTTGCATACAAGA+AGG | 0.571083 | tig0001526:-656846 | Msa1337850:CDS |
| CAGAACATGGTTACTTCACA+AGG | 0.571206 | tig0001526:-655401 | Msa1337850:intron |
| CAATCTCAAACTTCACATCC+TGG | 0.571439 | tig0001526:+656213 | None:intergenic |
| AGTGTTCATTGTTAGTGGCA+GGG | 0.574176 | tig0001526:-655478 | Msa1337850:CDS |
| ATCCTCTGAAACAGCTAAGA+GGG | 0.578760 | tig0001526:-656423 | Msa1337850:CDS |
| ATTGTGAATGCTGTGAGGGA+TGG | 0.578772 | tig0001526:-656062 | Msa1337850:CDS |
| GAAGGCCAATAGAATCTTCG+CGG | 0.579668 | tig0001526:-656828 | Msa1337850:CDS |
| TATATCAACCATGAGGAATG+AGG | 0.581492 | tig0001526:-654593 | Msa1337850:CDS |
| TATTGGTTATAAACCAAGTA+GGG | 0.583751 | tig0001526:-654458 | Msa1337850:CDS |
| AGACCCATGTGGATCCCCAC+AGG | 0.588284 | tig0001526:+656464 | None:intergenic |
| AGAGAGATAACATCCAAACT+AGG | 0.589770 | tig0001526:+655534 | None:intergenic |
| AAATCATTGTGAGTTTCAGA+AGG | 0.591816 | tig0001526:+656959 | None:intergenic |
| CGAACCGCCCCGCTGAGTGA+AGG | 0.592523 | tig0001526:+655909 | None:intergenic |
| AGACAAAGCTTCTTAAAACT+AGG | 0.593436 | tig0001526:+655654 | None:intergenic |
| AATATGGTGATGAACAATCT+GGG | 0.594049 | tig0001526:-656163 | Msa1337850:CDS |
| AATTGATCCCTGAGGCATCA+TGG | 0.598853 | tig0001526:+655566 | None:intergenic |
| AATTAATGTAGAAAAGGTGA+TGG | 0.600049 | tig0001526:-655185 | Msa1337850:CDS |
| CTTCGCGGACAAGGTTCGCG+AGG | 0.601412 | tig0001526:-656813 | Msa1337850:CDS |
| CATTATCTCAAGATATATGT+GGG | 0.605992 | tig0001526:-655714 | Msa1337850:CDS |
| TTCAGATTCTGAATCAAGCA+AGG | 0.606163 | tig0001526:-656253 | Msa1337850:CDS |
| TGTGAGCAAAGGTAAAGTGG+TGG | 0.606477 | tig0001526:-654623 | Msa1337850:CDS |
| GAGTCTAAAAGAGGTTACAT+TGG | 0.608056 | tig0001526:-656527 | Msa1337850:CDS |
| TTGGGTCTCTCTGCAGAACA+TGG | 0.608980 | tig0001526:-655414 | Msa1337850:CDS |
| GGTGGAGTAAGGATTCTCCC+TGG | 0.609902 | tig0001526:-655243 | Msa1337850:CDS |
| TGTCGTTGAAACTTCTGGAA+CGG | 0.610383 | tig0001526:+657253 | None:intergenic |
| CTACCTCTGTCAAAGAGTCA+AGG | 0.612948 | tig0001526:-656887 | Msa1337850:CDS |
| ACACCTTGACTCTTTGACAG+AGG | 0.613904 | tig0001526:+656884 | None:intergenic |
| CATTGGCCAGCATACTCTCA+AGG | 0.616590 | tig0001526:+655041 | None:intergenic |
| ATTGGACAAAGCCCTTGGAG+TGG | 0.616712 | tig0001526:-655988 | Msa1337850:CDS |
| GAGAGACCCAACTTGTCACA+TGG | 0.618405 | tig0001526:+655426 | None:intergenic |
| CTTTACACAGAAGCAACTGA+TGG | 0.620660 | tig0001526:-655160 | Msa1337850:CDS |
| GGGTGTGAGCAAAGGTAAAG+TGG | 0.624595 | tig0001526:-654626 | Msa1337850:CDS |
| CTGAATCAAGCAAGGAGTAG+CGG | 0.626177 | tig0001526:-656245 | Msa1337850:CDS |
| GTTCGTGAAGAAATACTTAG+GGG | 0.627972 | tig0001526:-656641 | Msa1337850:CDS |
| GGTAGCATGTAGTGAAACAA+AGG | 0.628237 | tig0001526:+656905 | None:intergenic |
| TTCGCCTTCACTCAGCGGGG+CGG | 0.628380 | tig0001526:-655913 | Msa1337850:CDS |
| AGGATTCCGAGAAGCAATTG+CGG | 0.629661 | tig0001526:-655827 | Msa1337850:CDS |
| GATGGCACCATGATGCCTCA+GGG | 0.629851 | tig0001526:-655573 | Msa1337850:CDS |
| GAGTATACTGTTTGTAGACA+AGG | 0.631640 | tig0001526:-656020 | Msa1337850:CDS |
| GGTTGTTCGCCTTCACTCAG+CGG | 0.632472 | tig0001526:-655918 | Msa1337850:CDS |
| TTGCATTGTGAATGCTGTGA+GGG | 0.638559 | tig0001526:-656066 | Msa1337850:CDS |
| GAAACATCGTCAATGTTCCA+CGG | 0.640645 | tig0001526:+655879 | None:intergenic |
| TCCTGATGAAGATTATGTCT+GGG | 0.641985 | tig0001526:-656783 | Msa1337850:CDS |
| CCTTGGAGTGGAAAATGATG+AGG | 0.642829 | tig0001526:-655976 | Msa1337850:CDS |
| CATGTTATCAGACTGCTGGA+AGG | 0.643775 | tig0001526:-654409 | Msa1337850:CDS |
| GAGGGGAATGAGAAATTAAG+GGG | 0.646856 | tig0001526:-656290 | Msa1337850:CDS |
| TTTGGTATCTCTGTAAGCAG+GGG | 0.647241 | tig0001526:+655620 | None:intergenic |
| CCATCAAGATTCTTCCTGTG+GGG | 0.659257 | tig0001526:-656478 | Msa1337850:CDS |
| GCAAACACTTGTGATGTGGT+TGG | 0.661634 | tig0001526:+654487 | None:intergenic |
| GATCCTGTAGTAGTTAAAAG+GGG | 0.670223 | tig0001526:-655019 | Msa1337850:CDS |
| GAAATGCAGGGTGTGAGCAA+AGG | 0.693831 | tig0001526:-654634 | Msa1337850:intron |
| GCATGCAAACACTTGTGATG+TGG | 0.707983 | tig0001526:+654483 | None:intergenic |
| TTGGTGATGAAGGAAGTGAA+AGG | 0.728881 | tig0001526:+657221 | None:intergenic |
| GTTGCATTGTGAATGCTGTG+AGG | 0.729569 | tig0001526:-656067 | Msa1337850:CDS |
| AAGAGCTTATATCAACCATG+AGG | 0.738943 | tig0001526:-654600 | Msa1337850:CDS |
| GCTTTGTTAATTGATCCCTG+AGG | 0.743258 | tig0001526:+655558 | None:intergenic |
| CCGATTCGAGAAGACCCATG+TGG | 0.743893 | tig0001526:+656453 | None:intergenic |
| TTGTTCGCCTTCACTCAGCG+GGG | 0.757164 | tig0001526:-655916 | Msa1337850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTTTGAAAATTGAAAAA+AGG | + | tig0001526:654358-654377 | None:intergenic | 15.0% |
| !!! | AAAAGTTTAATTTTCATACA+CGG | + | tig0001526:657066-657085 | None:intergenic | 15.0% |
| !!! | TTAAACTTTTTCTTTTGTAA+TGG | - | tig0001526:657076-657095 | Msa1337850:CDS | 15.0% |
| !!! | AAACTTTTCTAACAAAACTT+TGG | + | tig0001526:654749-654768 | None:intergenic | 20.0% |
| !! | ATATTTGTCATTAACTTCTT+TGG | + | tig0001526:655571-655590 | None:intergenic | 20.0% |
| !! | AAAGAAGTTAATGACAAATA+TGG | - | tig0001526:655570-655589 | Msa1337850:CDS | 20.0% |
| !!! | TAATTTTAGAATCATTGCTT+TGG | - | tig0001526:656070-656089 | Msa1337850:CDS | 20.0% |
| !!! | TTACTTGTTGATTCATTTTA+TGG | - | tig0001526:656462-656481 | Msa1337850:CDS | 20.0% |
| !! | TTGGAAAATTAATGTAGAAA+AGG | - | tig0001526:656558-656577 | Msa1337850:CDS | 20.0% |
| !! | CGAATAATTAATCTTTCATT+TGG | + | tig0001526:656847-656866 | None:intergenic | 20.0% |
| !!! | TATTCGTTTTATGATTTCAT+TGG | - | tig0001526:656861-656880 | Msa1337850:CDS | 20.0% |
| ! | AGAAGATTATGACTTATAAG+AGG | + | tig0001526:654179-654198 | None:intergenic | 25.0% |
| ! | TTCTTCTTCTTCTTATCATA+TGG | - | tig0001526:654204-654223 | Msa1337850:three_prime_UTR | 25.0% |
| !! | ATATATTTTCAGCTCAAAGA+CGG | - | tig0001526:654640-654659 | Msa1337850:intron | 25.0% |
| !! | ACTCACAATGATTTTTATCA+TGG | - | tig0001526:654799-654818 | Msa1337850:intron | 25.0% |
| ! | AAAAAACCCAATTTCACTTT+AGG | + | tig0001526:655042-655061 | None:intergenic | 25.0% |
| ! | CATTATCTCAAGATATATGT+GGG | - | tig0001526:656035-656054 | Msa1337850:CDS | 25.0% |
| !! | ACAATGAACACTGTATTTTT+GGG | + | tig0001526:656263-656282 | None:intergenic | 25.0% |
| !! | AACAATGAACACTGTATTTT+TGG | + | tig0001526:656264-656283 | None:intergenic | 25.0% |
| ! | AATTAATGTAGAAAAGGTGA+TGG | - | tig0001526:656564-656583 | Msa1337850:CDS | 25.0% |
| !! | ACTATCTTTTTCTTCAATGA+AGG | + | tig0001526:656617-656636 | None:intergenic | 25.0% |
| ! | TTGTTTATTTATGATACCTG+AGG | + | tig0001526:656778-656797 | None:intergenic | 25.0% |
| ! | GTCAATTAGAATTAGAATGA+AGG | - | tig0001526:656883-656902 | Msa1337850:CDS | 25.0% |
| !!! | TTGTATTTTTGTGAAATGCA+GGG | - | tig0001526:657103-657122 | Msa1337850:CDS | 25.0% |
| !! | TATTGGTTATAAACCAAGTA+GGG | - | tig0001526:657291-657310 | Msa1337850:CDS | 25.0% |
| ! | AAATACTATTTGGATGATAC+TGG | - | tig0001526:657316-657335 | Msa1337850:CDS | 25.0% |
| !! | TTCAATAGGTTGTTTCATTT+GGG | - | tig0001526:657455-657474 | Msa1337850:five_prime_UTR | 25.0% |
| !!! | ATTTCTTGTTTTGTATGACA+AGG | - | tig0001526:657555-657574 | Msa1337850:five_prime_UTR | 25.0% |
| ! | ATTATAGATGAGTGTTGCAA+AGG | + | tig0001526:654288-654307 | None:intergenic | 30.0% |
| TGTGTTTATGTTTATGTGAG+TGG | + | tig0001526:654326-654345 | None:intergenic | 30.0% | |
| ! | ATGCTTTCAAGATCTTGTTT+AGG | - | tig0001526:654379-654398 | Msa1337850:CDS | 30.0% |
| AATATTGTCGTTGAAACTTC+TGG | + | tig0001526:654504-654523 | None:intergenic | 30.0% | |
| ATTCTTCGTTTACGAGAAAT+TGG | + | tig0001526:654550-654569 | None:intergenic | 30.0% | |
| TTGTGACTTGAAATTCGAAT+GGG | - | tig0001526:654606-654625 | Msa1337850:CDS | 30.0% | |
| !!! | GATTCTGAAATCTTTTACGT+TGG | - | tig0001526:654673-654692 | Msa1337850:intron | 30.0% |
| GTTTCAGAAGGTAAAAAAGT+TGG | + | tig0001526:654781-654800 | None:intergenic | 30.0% | |
| AAATCATTGTGAGTTTCAGA+AGG | + | tig0001526:654793-654812 | None:intergenic | 30.0% | |
| GTTTCTGTAAGCATTATCTT+TGG | - | tig0001526:654821-654840 | Msa1337850:intron | 30.0% | |
| GGTTCATGATTATCATCTAA+TGG | - | tig0001526:654987-655006 | Msa1337850:intron | 30.0% | |
| ! | ACGTTTTCCTAAAGTGAAAT+TGG | - | tig0001526:655032-655051 | Msa1337850:CDS | 30.0% |
| ! | CGTTTTCCTAAAGTGAAATT+GGG | - | tig0001526:655033-655052 | Msa1337850:CDS | 30.0% |
| TGTTCGTGAAGAAATACTTA+GGG | - | tig0001526:655107-655126 | Msa1337850:CDS | 30.0% | |
| TTGTTGAACTGTGATTTGAT+TGG | - | tig0001526:655132-655151 | Msa1337850:CDS | 30.0% | |
| !!! | ATTTTTTGTCTTGTTGTAGC+AGG | - | tig0001526:655181-655200 | Msa1337850:CDS | 30.0% |
| TTGGATTATGAGTCTAAAAG+AGG | - | tig0001526:655213-655232 | Msa1337850:CDS | 30.0% | |
| !! | TACATTGGTGTTGATTACTT+TGG | - | tig0001526:655237-655256 | Msa1337850:CDS | 30.0% |
| AGTTGAAGGAAGAATTTGAA+GGG | - | tig0001526:655355-655374 | Msa1337850:intron | 30.0% | |
| ! | TTGGATTTGTTCAAAGGTAT+TGG | - | tig0001526:655405-655424 | Msa1337850:CDS | 30.0% |
| !! | TGGATTTGTTCAAAGGTATT+GGG | - | tig0001526:655406-655425 | Msa1337850:CDS | 30.0% |
| ! | AAATATGGTGATGAACAATC+TGG | - | tig0001526:655585-655604 | Msa1337850:CDS | 30.0% |
| ! | AATATGGTGATGAACAATCT+GGG | - | tig0001526:655586-655605 | Msa1337850:CDS | 30.0% |
| AGGCCAATTGTTTGTATAAA+CGG | - | tig0001526:655612-655631 | Msa1337850:CDS | 30.0% | |
| AATTGTTTGTATAAACGGTC+CGG | - | tig0001526:655617-655636 | Msa1337850:CDS | 30.0% | |
| !! | ATCATTGTTTCTGAGTTCAT+TGG | - | tig0001526:655810-655829 | Msa1337850:CDS | 30.0% |
| GCATTATCTCAAGATATATG+TGG | - | tig0001526:656034-656053 | Msa1337850:CDS | 30.0% | |
| AGACAAAGCTTCTTAAAACT+AGG | + | tig0001526:656098-656117 | None:intergenic | 30.0% | |
| AATTAACAAAGCTCCTAGTT+TGG | - | tig0001526:656202-656221 | Msa1337850:CDS | 30.0% | |
| AATACAGTGTTCATTGTTAG+TGG | - | tig0001526:656266-656285 | Msa1337850:CDS | 30.0% | |
| TGAAGAAAAAGATAGTGCAA+TGG | - | tig0001526:656621-656640 | Msa1337850:CDS | 30.0% | |
| AAAAAGATAGTGCAATGGTT+TGG | - | tig0001526:656626-656645 | Msa1337850:CDS | 30.0% | |
| TTTAACTACTACAGGATCAT+TGG | + | tig0001526:656728-656747 | None:intergenic | 30.0% | |
| ATGATCCTGTAGTAGTTAAA+AGG | - | tig0001526:656728-656747 | Msa1337850:CDS | 30.0% | |
| TGATCCTGTAGTAGTTAAAA+GGG | - | tig0001526:656729-656748 | Msa1337850:CDS | 30.0% | |
| TATTGTTGAAGTAAAACCTC+AGG | - | tig0001526:656759-656778 | Msa1337850:CDS | 30.0% | |
| !!! | TCCTTTCTTGAGTTTTTTCA+AGG | - | tig0001526:656938-656957 | Msa1337850:CDS | 30.0% |
| TCCTTGAAAAAACTCAAGAA+AGG | + | tig0001526:656942-656961 | None:intergenic | 30.0% | |
| !! | CTTGTATTTTTGTGAAATGC+AGG | - | tig0001526:657102-657121 | Msa1337850:CDS | 30.0% |
| ! | CTATTGGTTATAAACCAAGT+AGG | - | tig0001526:657290-657309 | Msa1337850:CDS | 30.0% |
| AAATAGTATTTAGCCCTACT+TGG | + | tig0001526:657307-657326 | None:intergenic | 30.0% | |
| AAGTAGGGCTAAATACTATT+TGG | - | tig0001526:657306-657325 | Msa1337850:CDS | 30.0% | |
| TGATAGATTCCTTCTTCAAT+AGG | - | tig0001526:657441-657460 | Msa1337850:five_prime_UTR | 30.0% | |
| ATGAAACAACCTATTGAAGA+AGG | + | tig0001526:657453-657472 | None:intergenic | 30.0% | |
| ! | CTTCAATAGGTTGTTTCATT+TGG | - | tig0001526:657454-657473 | Msa1337850:five_prime_UTR | 30.0% |
| TTTCATTTGGGAAGGAAAAA+AGG | - | tig0001526:657467-657486 | Msa1337850:five_prime_UTR | 30.0% | |
| ! | ACTCATGAAATATTGCTGTT+AGG | + | tig0001526:657618-657637 | None:intergenic | 30.0% |
| !! | TCAGTTCTGGAACTATGTTT+AGG | + | tig0001526:654471-654490 | None:intergenic | 35.0% |
| !! | TTACGAGAAATTGGTGATGA+AGG | + | tig0001526:654541-654560 | None:intergenic | 35.0% |
| CTTGTGACTTGAAATTCGAA+TGG | - | tig0001526:654605-654624 | Msa1337850:CDS | 35.0% | |
| TGCGTTTCAATTCTTCTCAT+TGG | - | tig0001526:654887-654906 | Msa1337850:intron | 35.0% | |
| ATCCTGATGAAGATTATGTC+TGG | - | tig0001526:654965-654984 | Msa1337850:intron | 35.0% | |
| TCCTGATGAAGATTATGTCT+GGG | - | tig0001526:654966-654985 | Msa1337850:intron | 35.0% | |
| !! | TGGTTTTACCAACTTACTTG+AGG | - | tig0001526:655007-655026 | Msa1337850:CDS | 35.0% |
| AAACGTTTCCTCAAGTAAGT+TGG | + | tig0001526:655018-655037 | None:intergenic | 35.0% | |
| !! | GTTCTGTAGATTTCTGAAGT+AGG | + | tig0001526:655081-655100 | None:intergenic | 35.0% |
| CTAAGTATTTCTTCACGAAC+AGG | + | tig0001526:655108-655127 | None:intergenic | 35.0% | |
| CTGTTCGTGAAGAAATACTT+AGG | - | tig0001526:655106-655125 | Msa1337850:CDS | 35.0% | |
| GTTCGTGAAGAAATACTTAG+GGG | - | tig0001526:655108-655127 | Msa1337850:CDS | 35.0% | |
| GAGTCTAAAAGAGGTTACAT+TGG | - | tig0001526:655222-655241 | Msa1337850:CDS | 35.0% | |
| TAAGAGGGTAAAAGAGTTGA+AGG | - | tig0001526:655341-655360 | Msa1337850:intron | 35.0% | |
| GAGTTGAAGGAAGAATTTGA+AGG | - | tig0001526:655354-655373 | Msa1337850:intron | 35.0% | |
| ! | GATGACTTGGATTTGTTCAA+AGG | - | tig0001526:655399-655418 | Msa1337850:intron | 35.0% |
| !!! | AGGTATTGGGTTGAAGTTTT+TGG | - | tig0001526:655419-655438 | Msa1337850:CDS | 35.0% |
| !! | TTTGGCATTGAGGAATCTTT+TGG | - | tig0001526:655437-655456 | Msa1337850:CDS | 35.0% |
| TTCAGATTCTGAATCAAGCA+AGG | - | tig0001526:655496-655515 | Msa1337850:CDS | 35.0% | |
| GGACCGTTTATACAAACAAT+TGG | + | tig0001526:655618-655637 | None:intergenic | 35.0% | |
| CTACAAACAGTATACTCGTA+AGG | + | tig0001526:655726-655745 | None:intergenic | 35.0% | |
| GAGTATACTGTTTGTAGACA+AGG | - | tig0001526:655729-655748 | Msa1337850:CDS | 35.0% | |
| !! | TAGACAAGGAAGTGTTGAAT+TGG | - | tig0001526:655743-655762 | Msa1337850:CDS | 35.0% |
| GAACTCAGCAATCAAAATGA+AGG | - | tig0001526:655902-655921 | Msa1337850:CDS | 35.0% | |
| CTCAAGATATATGTGGGATT+AGG | - | tig0001526:656041-656060 | Msa1337850:CDS | 35.0% | |
| ! | TTTTGGTATCTCTGTAAGCA+GGG | + | tig0001526:656133-656152 | None:intergenic | 35.0% |
| !! | TTTTTGGTATCTCTGTAAGC+AGG | + | tig0001526:656134-656153 | None:intergenic | 35.0% |
| CTTACAGAGATACCAAAAAC+AGG | - | tig0001526:656135-656154 | Msa1337850:CDS | 35.0% | |
| ! | CAAAAGGATCAACCTGTTTT+TGG | + | tig0001526:656150-656169 | None:intergenic | 35.0% |
| !!! | CAAAAACAGGTTGATCCTTT+TGG | - | tig0001526:656148-656167 | Msa1337850:CDS | 35.0% |
| ! | TTGATCCTTTTGGACTATGA+TGG | - | tig0001526:656158-656177 | Msa1337850:CDS | 35.0% |
| AGAGAGATAACATCCAAACT+AGG | + | tig0001526:656218-656237 | None:intergenic | 35.0% | |
| !!! | ATTTTTGGGATCACTGCATA+AGG | + | tig0001526:656249-656268 | None:intergenic | 35.0% |
| ! | TTTTCTCCATGTGACAAGTT+GGG | - | tig0001526:656317-656336 | Msa1337850:CDS | 35.0% |
| TCATCAATGTTGCATGATCT+CGG | - | tig0001526:656431-656450 | Msa1337850:CDS | 35.0% | |
| !! | ATGGATTCCTTTTTGACTGA+TGG | - | tig0001526:656481-656500 | Msa1337850:CDS | 35.0% |
| !! | GATTGGCATCAGATTTTGAT+TGG | - | tig0001526:656539-656558 | Msa1337850:CDS | 35.0% |
| GATCCTGTAGTAGTTAAAAG+GGG | - | tig0001526:656730-656749 | Msa1337850:CDS | 35.0% | |
| AAGAGCTTATATCAACCATG+AGG | - | tig0001526:657149-657168 | Msa1337850:CDS | 35.0% | |
| TATATCAACCATGAGGAATG+AGG | - | tig0001526:657156-657175 | Msa1337850:CDS | 35.0% | |
| CCTAGACATAGAAGAAAATC+TGG | + | tig0001526:657190-657209 | None:intergenic | 35.0% | |
| ! | CCAGATTTTCTTCTATGTCT+AGG | - | tig0001526:657187-657206 | Msa1337850:CDS | 35.0% |
| ! | ATAGGTTGTTTCATTTGGGA+AGG | - | tig0001526:657459-657478 | Msa1337850:five_prime_UTR | 35.0% |
| GTATGACAAGGAATGAATAC+AGG | - | tig0001526:657567-657586 | Msa1337850:five_prime_UTR | 35.0% | |
| ! | GCGTTGTTGAGTAATGGAAA+TGG | + | tig0001526:654257-654276 | None:intergenic | 40.0% |
| !! | GATGAAGCGTTGTTGAGTAA+TGG | + | tig0001526:654263-654282 | None:intergenic | 40.0% |
| ! | TGTCGTTGAAACTTCTGGAA+CGG | + | tig0001526:654499-654518 | None:intergenic | 40.0% |
| TGATGAAGGAAGTGAAAGGT+TGG | + | tig0001526:654527-654546 | None:intergenic | 40.0% | |
| !! | TTGGTGATGAAGGAAGTGAA+AGG | + | tig0001526:654531-654550 | None:intergenic | 40.0% |
| !! | CGTTGGTTCGTTAAAATCAC+AGG | - | tig0001526:654690-654709 | Msa1337850:intron | 40.0% |
| ! | GCAACTTCTTCTTGTTGTGA+TGG | + | tig0001526:654727-654746 | None:intergenic | 40.0% |
| GGTAGCATGTAGTGAAACAA+AGG | + | tig0001526:654847-654866 | None:intergenic | 40.0% | |
| !! | TCATTGGCTTGCATACAAGA+AGG | - | tig0001526:654903-654922 | Msa1337850:intron | 40.0% |
| ACCCAGACATAATCTTCATC+AGG | + | tig0001526:654970-654989 | None:intergenic | 40.0% | |
| ! | TCTTGTTGTAGCAGGATGTT+GGG | - | tig0001526:655189-655208 | Msa1337850:CDS | 40.0% |
| TACCATCAAGATTCTTCCTG+TGG | - | tig0001526:655269-655288 | Msa1337850:intron | 40.0% | |
| ACCATCAAGATTCTTCCTGT+GGG | - | tig0001526:655270-655289 | Msa1337850:intron | 40.0% | |
| !! | ATCCTCTGAAACAGCTAAGA+GGG | - | tig0001526:655326-655345 | Msa1337850:intron | 40.0% |
| GAAGGAAGAATTTGAAGGGA+AGG | - | tig0001526:655359-655378 | Msa1337850:intron | 40.0% | |
| !! | TGAAGGGAAGGTTCTGATTT+TGG | - | tig0001526:655371-655390 | Msa1337850:intron | 40.0% |
| !! | GAAGGGAAGGTTCTGATTTT+GGG | - | tig0001526:655372-655391 | Msa1337850:intron | 40.0% |
| !! | AAGGGAAGGTTCTGATTTTG+GGG | - | tig0001526:655373-655392 | Msa1337850:intron | 40.0% |
| !!! | GGTTGAAGTTTTTGGCATTG+AGG | - | tig0001526:655427-655446 | Msa1337850:CDS | 40.0% |
| ! | GCATTGAGGAATCTTTTGGA+GGG | - | tig0001526:655441-655460 | Msa1337850:CDS | 40.0% |
| !! | CATTGAGGAATCTTTTGGAG+GGG | - | tig0001526:655442-655461 | Msa1337850:CDS | 40.0% |
| TGGAGGGGAATGAGAAATTA+AGG | - | tig0001526:655457-655476 | Msa1337850:CDS | 40.0% | |
| GGAGGGGAATGAGAAATTAA+GGG | - | tig0001526:655458-655477 | Msa1337850:CDS | 40.0% | |
| GAGGGGAATGAGAAATTAAG+GGG | - | tig0001526:655459-655478 | Msa1337850:CDS | 40.0% | |
| ATTAAGGGGTGAAGTTGTGT+TGG | - | tig0001526:655473-655492 | Msa1337850:CDS | 40.0% | |
| CAATCTCAAACTTCACATCC+TGG | + | tig0001526:655539-655558 | None:intergenic | 40.0% | |
| GTGATGAACAATCTGGGTAT+AGG | - | tig0001526:655592-655611 | Msa1337850:CDS | 40.0% | |
| TTGCATTGTGAATGCTGTGA+GGG | - | tig0001526:655683-655702 | Msa1337850:CDS | 40.0% | |
| ! | CTCATCATTTTCCACTCCAA+GGG | + | tig0001526:655775-655794 | None:intergenic | 40.0% |
| GAAACATCGTCAATGTTCCA+CGG | + | tig0001526:655873-655892 | None:intergenic | 40.0% | |
| CTCTCATGATGTAGCGTATT+GGG | - | tig0001526:655971-655990 | Msa1337850:CDS | 40.0% | |
| !! | TTGGGCTAAGAGTTTTGATC+AGG | - | tig0001526:655989-656008 | Msa1337850:CDS | 40.0% |
| AGGATTTAGAGAGAGCTTGT+AGG | - | tig0001526:656009-656028 | Msa1337850:CDS | 40.0% | |
| GGATTTAGAGAGAGCTTGTA+GGG | - | tig0001526:656010-656029 | Msa1337850:CDS | 40.0% | |
| TTTGGTATCTCTGTAAGCAG+GGG | + | tig0001526:656132-656151 | None:intergenic | 40.0% | |
| ! | GCTTTGTTAATTGATCCCTG+AGG | + | tig0001526:656194-656213 | None:intergenic | 40.0% |
| AGTGTTCATTGTTAGTGGCA+GGG | - | tig0001526:656271-656290 | Msa1337850:CDS | 40.0% | |
| ! | GTTTTCTCCATGTGACAAGT+TGG | - | tig0001526:656316-656335 | Msa1337850:CDS | 40.0% |
| CAGAACATGGTTACTTCACA+AGG | - | tig0001526:656348-656367 | Msa1337850:CDS | 40.0% | |
| !! | ATTCCTTTTTGACTGATGGC+AGG | - | tig0001526:656485-656504 | Msa1337850:CDS | 40.0% |
| CTTTACACAGAAGCAACTGA+TGG | - | tig0001526:656589-656608 | Msa1337850:CDS | 40.0% | |
| ! | CAAGAAGCAGATCCTGATTT+TGG | - | tig0001526:656655-656674 | Msa1337850:CDS | 40.0% |
| !! | TGTCCCCTTTTAACTACTAC+AGG | + | tig0001526:656736-656755 | None:intergenic | 40.0% |
| CAAGTGTTTGCATGCACTAT+TGG | - | tig0001526:657274-657293 | Msa1337850:CDS | 40.0% | |
| ! | AAGTCACAAGAAGCGCGTAT+TGG | + | tig0001526:654595-654614 | None:intergenic | 45.0% |
| CTACCTCTGTCAAAGAGTCA+AGG | - | tig0001526:654862-654881 | Msa1337850:intron | 45.0% | |
| ACACCTTGACTCTTTGACAG+AGG | + | tig0001526:654868-654887 | None:intergenic | 45.0% | |
| GAAGGCCAATAGAATCTTCG+CGG | - | tig0001526:654921-654940 | Msa1337850:intron | 45.0% | |
| CTTGTCCGCGAAGATTCTAT+TGG | + | tig0001526:654929-654948 | None:intergenic | 45.0% | |
| CAATAGAATCTTCGCGGACA+AGG | - | tig0001526:654927-654946 | Msa1337850:intron | 45.0% | |
| ! | GTCTTGTTGTAGCAGGATGT+TGG | - | tig0001526:655188-655207 | Msa1337850:CDS | 45.0% |
| TTGTAGCAGGATGTTGGGTT+TGG | - | tig0001526:655194-655213 | Msa1337850:CDS | 45.0% | |
| CCATCAAGATTCTTCCTGTG+GGG | - | tig0001526:655271-655290 | Msa1337850:intron | 45.0% | |
| !! | CATCCTCTGAAACAGCTAAG+AGG | - | tig0001526:655325-655344 | Msa1337850:intron | 45.0% |
| ! | TACCCTCTTAGCTGTTTCAG+AGG | + | tig0001526:655331-655350 | None:intergenic | 45.0% |
| !! | AGGGAAGGTTCTGATTTTGG+GGG | - | tig0001526:655374-655393 | Msa1337850:intron | 45.0% |
| !!! | GATTTTGGGGGTTGATGACT+TGG | - | tig0001526:655386-655405 | Msa1337850:intron | 45.0% |
| !! | GGCATTGAGGAATCTTTTGG+AGG | - | tig0001526:655440-655459 | Msa1337850:CDS | 45.0% |
| CTGAATCAAGCAAGGAGTAG+CGG | - | tig0001526:655504-655523 | Msa1337850:CDS | 45.0% | |
| ! | GAGTAGCGGAAAAGATATCC+AGG | - | tig0001526:655518-655537 | Msa1337850:CDS | 45.0% |
| GTTGCATTGTGAATGCTGTG+AGG | - | tig0001526:655682-655701 | Msa1337850:CDS | 45.0% | |
| ATTGTGAATGCTGTGAGGGA+TGG | - | tig0001526:655687-655706 | Msa1337850:CDS | 45.0% | |
| TTGTGAATGCTGTGAGGGAT+GGG | - | tig0001526:655688-655707 | Msa1337850:CDS | 45.0% | |
| GTTGAATTGGACAAAGCCCT+TGG | - | tig0001526:655756-655775 | Msa1337850:CDS | 45.0% | |
| ! | CCTCATCATTTTCCACTCCA+AGG | + | tig0001526:655776-655795 | None:intergenic | 45.0% |
| CCTTGGAGTGGAAAATGATG+AGG | - | tig0001526:655773-655792 | Msa1337850:CDS | 45.0% | |
| AGGATTCCGAGAAGCAATTG+CGG | - | tig0001526:655922-655941 | Msa1337850:CDS | 45.0% | |
| GCTCTCATGATGTAGCGTAT+TGG | - | tig0001526:655970-655989 | Msa1337850:CDS | 45.0% | |
| !! | TGGTGCCATCATAGTCCAAA+AGG | + | tig0001526:656166-656185 | None:intergenic | 45.0% |
| ! | AATTGATCCCTGAGGCATCA+TGG | + | tig0001526:656186-656205 | None:intergenic | 45.0% |
| CAGTGTTCATTGTTAGTGGC+AGG | - | tig0001526:656270-656289 | Msa1337850:CDS | 45.0% | |
| GTGTTCATTGTTAGTGGCAG+GGG | - | tig0001526:656272-656291 | Msa1337850:CDS | 45.0% | |
| ATGGAGAAAACCAGTCGCTA+AGG | + | tig0001526:656307-656326 | None:intergenic | 45.0% | |
| ! | CAGATCCTGATTTTGGACTG+TGG | - | tig0001526:656662-656681 | Msa1337850:CDS | 45.0% |
| ! | TGTTCACCTTGAGAGTATGC+TGG | - | tig0001526:656702-656721 | Msa1337850:CDS | 45.0% |
| TGTGAGCAAAGGTAAAGTGG+TGG | - | tig0001526:657126-657145 | Msa1337850:CDS | 45.0% | |
| TGACTTCTCCTCATTCCTCA+TGG | + | tig0001526:657167-657186 | None:intergenic | 45.0% | |
| ! | CACTTGTGATGTGGTTGGTA+AGG | + | tig0001526:657260-657279 | None:intergenic | 45.0% |
| GCAAACACTTGTGATGTGGT+TGG | + | tig0001526:657265-657284 | None:intergenic | 45.0% | |
| GCATGCAAACACTTGTGATG+TGG | + | tig0001526:657269-657288 | None:intergenic | 45.0% | |
| TGGTCATGTTATCAGACTGC+TGG | - | tig0001526:657336-657355 | Msa1337850:CDS | 45.0% | |
| CATGTTATCAGACTGCTGGA+AGG | - | tig0001526:657340-657359 | Msa1337850:CDS | 45.0% | |
| !! | TGGAACGGTGTCATCAGTTC+TGG | + | tig0001526:654484-654503 | None:intergenic | 50.0% |
| CCCCACAGGAAGAATCTTGA+TGG | + | tig0001526:655274-655293 | None:intergenic | 50.0% | |
| CCACATGGGTCTTCTCGAAT+CGG | - | tig0001526:655296-655315 | Msa1337850:intron | 50.0% | |
| ATTGGACAAAGCCCTTGGAG+TGG | - | tig0001526:655761-655780 | Msa1337850:CDS | 50.0% | |
| CTTGTGCCGCAATTGCTTCT+CGG | + | tig0001526:655931-655950 | None:intergenic | 50.0% | |
| GTAGAGTTTGCCTTAGCGAC+TGG | - | tig0001526:656294-656313 | Msa1337850:CDS | 50.0% | |
| GAGAGACCCAACTTGTCACA+TGG | + | tig0001526:656326-656345 | None:intergenic | 50.0% | |
| TTGGGTCTCTCTGCAGAACA+TGG | - | tig0001526:656335-656354 | Msa1337850:CDS | 50.0% | |
| CCACCTGCCATCAGTCAAAA+AGG | + | tig0001526:656491-656510 | None:intergenic | 50.0% | |
| !! | CCTTTTTGACTGATGGCAGG+TGG | - | tig0001526:656488-656507 | Msa1337850:CDS | 50.0% |
| GCTTGCCACAGTCCAAAATC+AGG | + | tig0001526:656670-656689 | None:intergenic | 50.0% | |
| CATTGGCCAGCATACTCTCA+AGG | + | tig0001526:656711-656730 | None:intergenic | 50.0% | |
| GAAATGCAGGGTGTGAGCAA+AGG | - | tig0001526:657115-657134 | Msa1337850:CDS | 50.0% | |
| GGGTGTGAGCAAAGGTAAAG+TGG | - | tig0001526:657123-657142 | Msa1337850:CDS | 50.0% | |
| TCTTCCTGTGGGGATCCACA+TGG | - | tig0001526:655281-655300 | Msa1337850:intron | 55.0% | |
| CTTCCTGTGGGGATCCACAT+GGG | - | tig0001526:655282-655301 | Msa1337850:intron | 55.0% | |
| ! | CCGATTCGAGAAGACCCATG+TGG | + | tig0001526:655299-655318 | None:intergenic | 55.0% |
| AAACGGTCCGGTTTCGACTC+AGG | - | tig0001526:655629-655648 | Msa1337850:CDS | 55.0% | |
| TCCGGTTTCGACTCAGGAGA+AGG | - | tig0001526:655635-655654 | Msa1337850:CDS | 55.0% | |
| GCCTTCTCCTGAGTCGAAAC+CGG | + | tig0001526:655639-655658 | None:intergenic | 55.0% | |
| GGTTGTTCGCCTTCACTCAG+CGG | - | tig0001526:655831-655850 | Msa1337850:CDS | 55.0% | |
| GTTGTTCGCCTTCACTCAGC+GGG | - | tig0001526:655832-655851 | Msa1337850:CDS | 55.0% | |
| TTGTTCGCCTTCACTCAGCG+GGG | - | tig0001526:655833-655852 | Msa1337850:CDS | 55.0% | |
| TGATGGCACCATGATGCCTC+AGG | - | tig0001526:656175-656194 | Msa1337850:CDS | 55.0% | |
| GATGGCACCATGATGCCTCA+GGG | - | tig0001526:656176-656195 | Msa1337850:CDS | 55.0% | |
| GACTGATGGCAGGTGGAGTA+AGG | - | tig0001526:656495-656514 | Msa1337850:CDS | 55.0% | |
| GGTGGAGTAAGGATTCTCCC+TGG | - | tig0001526:656506-656525 | Msa1337850:CDS | 55.0% | |
| GATTCTCCCTGGACGACTCT+CGG | - | tig0001526:656517-656536 | Msa1337850:CDS | 55.0% | |
| AGACCCATGTGGATCCCCAC+AGG | + | tig0001526:655288-655307 | None:intergenic | 60.0% | |
| TCCCTGGACGACTCTCGGAT+TGG | - | tig0001526:656522-656541 | Msa1337850:CDS | 60.0% | |
| GCCAATCCGAGAGTCGTCCA+GGG | + | tig0001526:656526-656545 | None:intergenic | 60.0% | |
| TGCCAATCCGAGAGTCGTCC+AGG | + | tig0001526:656527-656546 | None:intergenic | 60.0% | |
| CTTCGCGGACAAGGTTCGCG+AGG | - | tig0001526:654936-654955 | Msa1337850:intron | 65.0% | |
| TTCGCCTTCACTCAGCGGGG+CGG | - | tig0001526:655836-655855 | Msa1337850:CDS | 65.0% | |
| CTTCACTCAGCGGGGCGGTT+CGG | - | tig0001526:655841-655860 | Msa1337850:CDS | 65.0% | |
| TTCACTCAGCGGGGCGGTTC+GGG | - | tig0001526:655842-655861 | Msa1337850:CDS | 65.0% | |
| CGAACCGCCCCGCTGAGTGA+AGG | + | tig0001526:655843-655862 | None:intergenic | 70.0% | |
| ! | GGGCGGTTCGGGTGAATCCG+TGG | - | tig0001526:655853-655872 | Msa1337850:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0001526 | gene | 654128 | 657643 | 654128 | ID=Msa1337850;Name=Msa1337850 |
| tig0001526 | mRNA | 654128 | 657643 | 654128 | ID=Msa1337850-mRNA-1;Parent=Msa1337850;Name=Msa1337850-mRNA-1;_AED=0.00;_eAED=0.00;_QI=251|1|1|1|1|1|3|241|847 |
| tig0001526 | exon | 654128 | 654647 | 654128 | ID=Msa1337850-mRNA-1:exon:1369;Parent=Msa1337850-mRNA-1 |
| tig0001526 | exon | 654991 | 655264 | 654991 | ID=Msa1337850-mRNA-1:exon:1368;Parent=Msa1337850-mRNA-1 |
| tig0001526 | exon | 655402 | 657643 | 655402 | ID=Msa1337850-mRNA-1:exon:1367;Parent=Msa1337850-mRNA-1 |
| tig0001526 | five_prime_UTR | 657393 | 657643 | 657393 | ID=Msa1337850-mRNA-1:five_prime_utr;Parent=Msa1337850-mRNA-1 |
| tig0001526 | CDS | 655402 | 657392 | 655402 | ID=Msa1337850-mRNA-1:cds;Parent=Msa1337850-mRNA-1 |
| tig0001526 | CDS | 654991 | 655264 | 654991 | ID=Msa1337850-mRNA-1:cds;Parent=Msa1337850-mRNA-1 |
| tig0001526 | CDS | 654369 | 654647 | 654369 | ID=Msa1337850-mRNA-1:cds;Parent=Msa1337850-mRNA-1 |
| tig0001526 | three_prime_UTR | 654128 | 654368 | 654128 | ID=Msa1337850-mRNA-1:three_prime_utr;Parent=Msa1337850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
