AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0073500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0073500 MtrunA17_Chr1g0180791 99.630 810 3 0 1 810 1 810 0.0 1654
Msa0073500 MtrunA17_Chr7g0264521 95.443 812 32 4 1 810 1 809 0.0 1568
Msa0073500 MtrunA17_Chr2g0327121 89.642 811 77 3 3 810 2 808 0.0 1498
Msa0073500 MtrunA17_Chr2g0327231 94.118 272 13 1 367 638 238 506 9.23e-179 523
Msa0073500 MtrunA17_Chr2g0327231 79.478 268 50 2 65 331 13 276 1.63e-143 432
Msa0073500 MtrunA17_Chr2g0327231 45.625 160 84 1 205 361 346 505 1.30e-41 159
Msa0073500 MtrunA17_Chr2g0327231 44.444 90 46 1 480 569 155 240 4.16e-18 88.6
Msa0073500 MtrunA17_Chr2g0277831 43.986 582 289 8 207 768 245 809 3.56e-154 470
Msa0073500 MtrunA17_Chr2g0277831 38.321 274 163 2 195 466 523 792 4.62e-49 186
Msa0073500 MtrunA17_Chr7g0255721 43.148 540 272 9 201 711 384 917 1.30e-141 442
Msa0073500 MtrunA17_Chr7g0255721 41.667 276 144 2 196 469 676 936 2.38e-60 221
Msa0073500 MtrunA17_Chr7g0255721 33.916 286 177 5 434 713 338 617 6.86e-37 149
Msa0073500 MtrunA17_Chr7g0255691 43.444 511 271 6 208 711 20 519 8.24e-135 412
Msa0073500 MtrunA17_Chr7g0255691 38.828 273 149 2 204 473 285 542 7.46e-52 190
Msa0073500 MtrunA17_Chr7g0255641 45.745 470 242 6 244 711 432 890 3.39e-134 422
Msa0073500 MtrunA17_Chr7g0255641 41.007 278 147 2 191 466 644 906 1.09e-59 219
Msa0073500 MtrunA17_Chr3g0086401 39.073 604 301 12 208 768 96 675 5.69e-127 395
Msa0073500 MtrunA17_Chr7g0255651 39.773 528 294 7 190 710 4 514 1.94e-121 378
Msa0073500 MtrunA17_Chr3g0086411 42.637 455 217 8 294 707 8 459 2.50e-108 341
Msa0073500 MtrunA17_Chr3g0086411 35.052 291 163 3 194 466 204 486 2.92e-45 170
Msa0073500 MtrunA17_Chr3g0086411 33.654 208 109 6 566 753 7 205 1.35e-20 96.3
Msa0073500 MtrunA17_Chr6g0459841 68.571 210 64 2 2 210 3 211 3.60e-89 298
Msa0073500 MtrunA17_Chr7g0255901 35.614 570 297 20 244 761 362 913 5.58e-86 293
Msa0073500 MtrunA17_Chr7g0255901 41.544 272 150 7 201 466 635 903 9.70e-49 186
Msa0073500 MtrunA17_Chr4g0043381 32.584 623 353 19 191 778 530 1120 1.18e-77 272
Msa0073500 MtrunA17_Chr6g0460061 74.375 160 40 1 51 210 1 159 7.27e-73 252
Msa0073500 MtrunA17_Chr4g0033451 37.221 403 230 9 203 584 378 778 1.23e-65 238
Msa0073500 MtrunA17_Chr4g0033451 37.395 238 134 5 477 705 379 610 9.33e-40 159
Msa0073500 MtrunA17_Chr3g0145011 46.522 230 119 2 477 704 138 365 6.25e-62 214
Msa0073500 MtrunA17_Chr3g0145011 44.304 237 129 2 205 438 139 375 1.13e-58 205
Msa0073500 MtrunA17_Chr3g0141901 45.652 230 121 2 477 704 135 362 3.29e-61 212
Msa0073500 MtrunA17_Chr3g0141901 43.882 237 130 2 205 438 136 372 5.01e-58 203
Msa0073500 MtrunA17_Chr4g0050561 35.905 337 202 7 379 705 52 384 3.77e-61 212
Msa0073500 MtrunA17_Chr4g0050561 44.915 236 126 2 207 438 158 393 5.05e-61 212
Msa0073500 MtrunA17_Chr8g0345461 43.154 241 137 0 464 704 151 391 7.92e-61 212
Msa0073500 MtrunA17_Chr8g0345461 39.689 257 149 4 204 457 164 417 7.09e-58 204
Msa0073500 MtrunA17_Chr7g0262801 47.137 227 117 1 207 430 189 415 3.88e-60 210
Msa0073500 MtrunA17_Chr7g0262801 41.453 234 137 0 472 705 181 414 5.32e-54 193
Msa0073500 MtrunA17_Chr1g0182711 46.696 227 118 1 207 430 190 416 4.97e-60 210
Msa0073500 MtrunA17_Chr1g0182711 41.453 234 137 0 472 705 182 415 2.30e-54 194
Msa0073500 MtrunA17_Chr7g0217421 43.154 241 134 2 476 714 35 274 5.05e-59 206
Msa0073500 MtrunA17_Chr7g0217421 44.033 243 130 4 205 442 39 280 4.32e-56 198
Msa0073500 MtrunA17_Chr1g0200081 43.154 241 136 1 464 704 161 400 1.20e-58 206
Msa0073500 MtrunA17_Chr1g0200081 39.300 257 149 5 204 457 174 426 1.59e-55 197
Msa0073500 MtrunA17_Chr1g0192151 41.702 235 137 0 472 706 161 395 2.30e-58 205
Msa0073500 MtrunA17_Chr1g0192151 41.702 235 134 2 207 438 169 403 3.91e-57 201
Msa0073500 MtrunA17_Chr4g0014731 41.702 235 137 0 472 706 162 396 2.68e-58 204
Msa0073500 MtrunA17_Chr4g0014731 35.974 303 178 4 152 438 102 404 5.20e-57 201
Msa0073500 MtrunA17_Chr4g0004121 38.816 304 163 7 469 763 233 522 3.01e-55 199
Msa0073500 MtrunA17_Chr4g0004121 42.373 236 124 4 205 431 242 474 4.62e-47 176
Msa0073500 MtrunA17_Chr4g0052411 46.696 227 117 3 205 428 229 454 1.14e-53 198
Msa0073500 MtrunA17_Chr4g0052411 41.991 231 131 2 476 704 225 454 1.92e-52 194
Msa0073500 MtrunA17_Chr2g0316851 44.105 229 122 2 206 428 595 823 1.36e-53 202
Msa0073500 MtrunA17_Chr2g0316851 36.596 235 138 4 480 707 596 826 8.06e-43 169
Msa0073500 MtrunA17_Chr3g0143721 40.329 243 141 3 474 714 243 483 2.75e-53 197
Msa0073500 MtrunA17_Chr3g0143721 43.802 242 131 4 205 443 249 488 1.12e-52 195
Msa0073500 MtrunA17_Chr3g0108321 42.308 234 125 3 440 665 115 346 2.99e-52 186
Msa0073500 MtrunA17_Chr3g0108321 49.153 177 87 1 204 377 158 334 7.64e-48 174
Msa0073500 MtrunA17_Chr2g0297281 45.815 227 119 3 205 428 286 511 4.06e-52 194
Msa0073500 MtrunA17_Chr2g0297281 41.991 231 131 2 476 704 282 511 1.46e-51 192
Msa0073500 MtrunA17_Chr6g0456351 43.220 236 131 2 205 438 317 551 2.85e-51 189
Msa0073500 MtrunA17_Chr6g0456351 38.211 246 138 4 480 715 319 560 7.09e-46 174
Msa0073500 MtrunA17_Chr4g0052271 39.167 240 141 4 466 704 107 342 5.17e-51 184
Msa0073500 MtrunA17_Chr4g0052271 34.457 267 168 5 205 467 119 382 9.38e-40 152
Msa0073500 MtrunA17_Chr3g0104211 43.802 242 129 4 200 435 299 539 1.20e-50 191
Msa0073500 MtrunA17_Chr3g0104211 33.607 366 214 9 387 740 228 576 3.64e-48 183
Msa0073500 MtrunA17_Chr2g0331161 39.544 263 148 3 186 438 389 650 2.59e-50 190
Msa0073500 MtrunA17_Chr2g0331161 40.870 230 135 1 477 706 414 642 6.34e-50 189
Msa0073500 MtrunA17_Chr5g0429571 43.028 251 130 5 203 441 311 560 7.22e-50 188
Msa0073500 MtrunA17_Chr5g0429571 37.091 275 161 5 477 740 312 585 9.18e-49 185
Msa0073500 MtrunA17_Chr8g0388371 40.476 252 134 5 205 442 404 653 9.96e-50 189
Msa0073500 MtrunA17_Chr8g0388371 40.598 234 130 3 480 705 406 638 7.83e-46 177
Msa0073500 MtrunA17_Chr7g0248361 42.982 228 126 3 480 704 194 420 4.54e-49 184
Msa0073500 MtrunA17_Chr7g0248361 40.773 233 129 4 203 428 190 420 1.63e-45 173
Msa0073500 MtrunA17_Chr1g0158881 40.486 247 141 3 464 709 314 555 5.85e-49 185
Msa0073500 MtrunA17_Chr1g0158881 42.601 223 126 2 207 429 331 551 3.49e-44 171
Msa0073500 MtrunA17_Chr2g0321241 42.478 226 122 6 472 695 126 345 2.39e-48 177
Msa0073500 MtrunA17_Chr2g0321241 37.607 234 138 6 205 434 132 361 1.22e-41 158
Msa0073500 MtrunA17_Chr4g0026631 42.035 226 123 6 472 695 121 340 2.54e-48 177
Msa0073500 MtrunA17_Chr4g0026631 38.034 234 137 6 205 434 127 356 5.92e-43 162
Msa0073500 MtrunA17_Chr7g0260601 42.000 250 135 5 187 428 221 468 4.77e-48 182
Msa0073500 MtrunA17_Chr7g0260601 42.105 228 128 3 480 704 242 468 9.05e-48 181
Msa0073500 MtrunA17_Chr6g0476861 41.667 228 129 3 480 704 199 425 8.41e-48 181
Msa0073500 MtrunA17_Chr6g0476861 41.564 243 135 4 192 428 184 425 2.02e-46 177
Msa0073500 MtrunA17_Chr5g0432631 42.672 232 132 1 207 438 231 461 8.96e-48 182
Msa0073500 MtrunA17_Chr5g0432631 37.959 245 144 3 477 717 228 468 4.25e-42 165
Msa0073500 MtrunA17_Chr5g0397121 34.733 262 165 4 478 737 513 770 1.77e-47 181
Msa0073500 MtrunA17_Chr5g0397121 41.667 228 128 3 205 429 513 738 4.96e-47 180
Msa0073500 MtrunA17_Chr4g0031821 42.795 229 125 4 480 704 322 548 2.60e-47 181
Msa0073500 MtrunA17_Chr4g0031821 42.149 242 131 4 194 428 309 548 6.13e-47 179
Msa0073500 MtrunA17_Chr8g0387641 39.916 238 138 3 204 438 520 755 3.18e-47 181
Msa0073500 MtrunA17_Chr8g0387641 34.201 269 163 6 477 735 520 784 6.42e-46 177
Msa0073500 MtrunA17_Chr8g0362771 42.553 235 133 2 205 438 237 470 3.83e-47 179
Msa0073500 MtrunA17_Chr8g0362771 38.525 244 145 3 456 699 217 455 1.02e-46 178
Msa0073500 MtrunA17_Chr1g0195741 37.037 297 169 8 479 769 939 1223 5.60e-47 181
Msa0073500 MtrunA17_Chr1g0195741 43.103 232 126 4 205 432 938 1167 7.28e-45 175
Msa0073500 MtrunA17_Chr1g0195731 37.417 302 172 8 479 774 935 1225 8.19e-47 181
Msa0073500 MtrunA17_Chr1g0195731 43.103 232 126 4 205 432 934 1163 1.38e-45 177
Msa0073500 MtrunA17_Chr3g0135721 42.241 232 133 1 207 438 226 456 8.63e-47 178
Msa0073500 MtrunA17_Chr3g0135721 39.035 228 125 3 477 699 223 441 1.85e-44 171
Msa0073500 MtrunA17_Chr3g0094871 39.407 236 137 3 480 710 13 247 2.57e-46 171
Msa0073500 MtrunA17_Chr3g0094871 34.177 316 164 7 205 514 11 288 9.04e-42 158
Msa0073500 MtrunA17_Chr4g0038101 39.916 238 136 4 480 714 723 956 7.81e-46 177
Msa0073500 MtrunA17_Chr4g0038101 39.655 232 134 4 205 432 721 950 2.10e-43 170
Msa0073500 MtrunA17_Chr3g0135761 42.174 230 132 1 209 438 226 454 1.47e-45 174
Msa0073500 MtrunA17_Chr3g0135761 38.158 228 127 3 477 699 221 439 6.19e-43 166
Msa0073500 MtrunA17_Chr1g0202371 42.174 230 127 4 205 431 397 623 2.69e-45 174
Msa0073500 MtrunA17_Chr1g0202371 37.607 234 137 5 479 709 398 625 2.39e-42 165
Msa0073500 MtrunA17_Chr6g0462581 42.105 228 126 4 205 429 500 724 2.86e-45 174
Msa0073500 MtrunA17_Chr6g0462581 33.770 305 189 6 478 774 500 799 5.05e-45 174
Msa0073500 MtrunA17_Chr3g0127401 40.000 235 131 5 200 429 77 306 3.45e-45 167
Msa0073500 MtrunA17_Chr3g0127401 37.447 235 133 5 477 705 80 306 5.66e-43 160
Msa0073500 MtrunA17_Chr7g0246111 42.489 233 128 4 200 429 207 436 4.38e-45 169
Msa0073500 MtrunA17_Chr7g0246111 37.768 233 136 5 476 705 210 436 1.90e-42 162
Msa0073500 MtrunA17_Chr3g0127431 33.451 284 177 6 480 758 86 362 1.36e-44 166
Msa0073500 MtrunA17_Chr3g0127431 37.917 240 139 5 198 432 78 312 2.88e-44 165
Msa0073500 MtrunA17_Chr4g0047411 29.913 458 286 14 196 634 169 610 4.10e-44 170
Msa0073500 MtrunA17_Chr4g0047411 39.738 229 119 5 504 714 202 429 2.96e-40 158
Msa0073500 MtrunA17_Chr6g0459541 32.432 333 176 9 470 775 34 344 6.11e-44 162
Msa0073500 MtrunA17_Chr6g0459541 33.221 298 152 10 205 467 42 327 2.93e-35 137
Msa0073500 MtrunA17_Chr1g0204031 41.558 231 126 6 204 429 556 782 7.35e-44 171
Msa0073500 MtrunA17_Chr1g0204031 38.261 230 134 5 479 705 558 782 9.22e-42 164
Msa0073500 MtrunA17_Chr1g0202381 38.298 235 137 5 478 709 468 697 1.11e-43 169
Msa0073500 MtrunA17_Chr1g0202381 40.870 230 129 5 204 429 467 693 6.63e-43 167
Msa0073500 MtrunA17_Chr3g0116131 42.601 223 122 4 205 423 902 1122 2.18e-43 170
Msa0073500 MtrunA17_Chr3g0116131 40.807 223 125 4 479 698 903 1121 3.08e-43 169
Msa0073500 MtrunA17_Chr5g0432641 41.810 232 131 2 209 437 195 425 4.59e-43 166
Msa0073500 MtrunA17_Chr5g0432641 37.004 227 139 2 482 708 195 417 3.73e-40 157
Msa0073500 MtrunA17_Chr6g0459561 34.653 303 172 7 476 775 380 659 7.46e-43 166
Msa0073500 MtrunA17_Chr6g0459561 36.934 287 155 11 192 466 369 641 2.08e-38 152
Msa0073500 MtrunA17_Chr3g0129971 39.759 249 137 6 205 443 296 541 7.79e-43 167
Msa0073500 MtrunA17_Chr3g0129971 41.350 237 132 5 478 708 296 531 4.75e-41 162
Msa0073500 MtrunA17_Chr6g0459551 31.915 329 168 10 476 772 100 404 2.13e-35 139
Msa0073500 MtrunA17_Chr6g0459551 31.438 299 157 9 192 449 89 380 6.34e-33 132
Msa0073500 MtrunA17_Chr3g0135781 38.919 185 107 3 456 640 35 213 3.02e-33 127
Msa0073500 MtrunA17_Chr3g0135781 44.025 159 88 1 205 363 55 212 2.67e-32 124
Msa0073500 MtrunA17_Chr8g0357301 36.017 236 136 5 228 451 492 724 1.26e-32 136
Msa0073500 MtrunA17_Chr8g0357301 33.913 230 134 4 484 704 479 699 1.41e-28 123
Msa0073500 MtrunA17_Chr2g0289231 35.808 229 131 5 204 422 296 518 8.51e-32 131
Msa0073500 MtrunA17_Chr2g0289231 32.129 249 146 7 479 713 298 537 2.52e-28 120
Msa0073500 MtrunA17_Chr6g0459531 29.773 309 164 9 470 775 59 317 5.75e-30 121
Msa0073500 MtrunA17_Chr6g0459531 29.630 270 148 8 192 449 54 293 2.25e-25 107
Msa0073500 MtrunA17_Chr1g0190401 33.023 215 139 3 473 683 672 885 3.35e-28 122
Msa0073500 MtrunA17_Chr1g0190401 29.524 315 190 9 219 524 691 982 2.62e-24 109
Msa0073500 MtrunA17_Chr1g0168321 42.236 161 88 3 548 704 196 355 1.03e-27 118
Msa0073500 MtrunA17_Chr1g0168321 33.047 233 110 5 203 428 162 355 9.84e-27 115
Msa0073500 MtrunA17_Chr2g0315971 24.030 541 331 20 135 649 154 640 9.96e-26 113
Msa0073500 MtrunA17_Chr5g0432391 38.854 157 96 0 282 438 80 236 2.41e-25 109
Msa0073500 MtrunA17_Chr5g0432391 30.653 199 128 3 546 740 74 266 3.07e-24 106
Msa0073500 MtrunA17_Chr4g0062081 52.564 78 36 1 209 285 11 88 1.66e-21 90.1
Msa0073500 MtrunA17_Chr4g0062081 46.154 78 41 1 482 558 11 88 7.75e-18 79.3
Msa0073500 MtrunA17_Chr2g0327221 87.234 47 6 0 724 770 1 47 4.15e-20 84.3
Msa0073500 MtrunA17_Chr5g0404291 29.858 211 115 8 509 694 382 584 5.70e-16 82.0
Msa0073500 MtrunA17_Chr5g0404291 30.049 203 112 7 241 418 387 584 6.59e-13 72.4
Msa0073500 MtrunA17_Chr3g0116941 29.268 205 125 6 480 667 160 361 2.96e-15 79.3
Msa0073500 MtrunA17_Chr6g0450161 28.774 212 119 8 509 695 357 561 5.12e-15 79.0
Msa0073500 MtrunA17_Chr6g0450161 30.872 149 98 4 241 388 362 506 2.52e-13 73.6
Msa0073500 MtrunA17_Chr4g0039781 31.288 163 104 5 506 667 360 515 4.16e-14 76.3
Msa0073500 MtrunA17_Chr4g0039781 30.667 150 97 6 241 388 368 512 4.48e-12 69.7
Msa0073500 MtrunA17_Chr3g0086421 42.529 87 45 2 207 290 236 320 2.43e-13 72.0
Msa0073500 MtrunA17_Chr3g0086421 38.372 86 50 2 480 563 236 320 9.83e-11 64.3
Msa0073500 MtrunA17_Chr8g0372701 29.940 167 104 5 488 649 232 390 5.85e-12 68.9
Msa0073500 MtrunA17_Chr2g0315921 28.916 249 137 13 135 374 159 376 1.45e-11 67.4
Msa0073500 MtrunA17_Chr2g0315911 27.976 168 108 5 487 649 213 372 3.43e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0073500 AT5G03340.1 93.508 801 47 3 1 798 1 799 0.0 1540
Msa0073500 AT3G53230.1 90.709 818 65 3 1 810 1 815 0.0 1508
Msa0073500 AT3G09840.1 92.232 811 60 3 1 810 1 809 0.0 1505
Msa0073500 AT3G01610.1 42.159 593 305 7 207 776 232 809 2.56e-147 453
Msa0073500 AT3G01610.1 36.054 294 160 4 479 753 231 515 5.02e-48 183
Msa0073500 AT3G01610.1 37.634 279 168 4 194 470 514 788 3.22e-42 166
Msa0073500 AT3G01610.2 42.159 593 305 7 207 776 232 809 2.99e-147 453
Msa0073500 AT3G01610.2 36.054 294 160 4 479 753 231 515 5.08e-48 183
Msa0073500 AT3G01610.2 37.634 279 168 4 194 470 514 788 3.53e-42 166
Msa0073500 AT2G03670.1 42.604 507 267 5 209 707 23 513 3.32e-136 417
Msa0073500 AT2G03670.1 40.210 286 152 2 191 472 269 539 2.29e-54 199
Msa0073500 AT2G03670.2 43.095 420 215 5 209 620 23 426 1.69e-108 339
Msa0073500 AT2G03670.2 36.000 225 131 4 482 698 23 242 1.99e-35 140
Msa0073500 AT2G03670.2 40.260 154 88 1 191 340 269 422 3.91e-25 109
Msa0073500 AT1G03000.1 33.972 574 315 17 244 768 379 937 1.31e-87 298
Msa0073500 AT1G03000.1 42.066 271 151 5 201 466 651 920 1.30e-52 198
Msa0073500 AT3G56690.1 46.970 264 139 1 447 710 690 952 6.76e-78 272
Msa0073500 AT3G56690.1 45.902 244 130 1 204 445 720 963 1.70e-60 222
Msa0073500 AT3G56690.1 45.536 224 120 2 210 432 387 609 4.79e-58 215
Msa0073500 AT3G56690.1 40.887 203 112 3 510 709 413 610 5.17e-39 156
Msa0073500 AT5G08470.3 34.630 514 287 12 234 722 576 1065 1.54e-73 261
Msa0073500 AT5G08470.3 42.544 228 131 0 205 432 832 1059 1.56e-49 189
Msa0073500 AT5G08470.1 34.630 514 287 12 234 722 585 1074 1.85e-73 261
Msa0073500 AT5G08470.1 42.544 228 131 0 205 432 841 1068 1.53e-49 189
Msa0073500 AT1G05910.1 44.643 280 144 5 203 474 376 652 1.36e-64 235
Msa0073500 AT1G05910.1 33.808 281 155 7 477 745 377 638 3.20e-39 157
Msa0073500 AT1G45000.1 46.522 230 119 2 477 704 135 362 2.93e-62 215
Msa0073500 AT1G45000.1 44.304 237 129 2 205 438 136 372 5.55e-58 203
Msa0073500 AT5G19990.2 36.446 332 198 7 382 705 2 328 3.90e-62 214
Msa0073500 AT5G19990.2 44.915 236 126 2 207 438 102 337 6.89e-62 213
Msa0073500 AT5G20000.1 36.499 337 200 7 379 705 54 386 8.10e-62 214
Msa0073500 AT5G20000.1 44.915 236 126 2 207 438 160 395 1.95e-61 213
Msa0073500 AT2G20140.1 48.018 227 115 1 207 430 187 413 9.25e-62 215
Msa0073500 AT2G20140.1 42.308 234 135 0 472 705 179 412 1.83e-55 197
Msa0073500 AT5G43010.1 46.087 230 120 2 477 704 135 362 9.97e-62 214
Msa0073500 AT5G43010.1 43.882 237 130 2 205 438 136 372 9.54e-58 203
Msa0073500 AT5G19990.1 35.988 339 203 7 377 705 52 386 1.41e-61 214
Msa0073500 AT5G19990.1 44.915 236 126 2 207 438 160 395 1.80e-61 214
Msa0073500 AT5G19990.3 35.988 339 203 7 377 705 52 386 1.41e-61 214
Msa0073500 AT5G19990.3 44.915 236 126 2 207 438 160 395 1.80e-61 214
Msa0073500 AT4G29040.1 47.577 227 116 2 207 430 187 413 1.31e-60 212
Msa0073500 AT4G29040.1 41.880 234 136 0 472 705 179 412 8.56e-55 196
Msa0073500 AT1G53750.1 43.154 241 137 0 464 704 151 391 1.37e-60 211
Msa0073500 AT1G53750.1 39.382 259 151 4 204 459 164 419 1.05e-57 203
Msa0073500 AT5G58290.1 39.792 289 160 4 440 716 108 394 7.85e-60 209
Msa0073500 AT5G58290.1 44.444 234 127 1 204 434 151 384 4.35e-58 204
Msa0073500 AT3G05530.1 42.553 235 135 0 472 706 162 396 4.15e-59 207
Msa0073500 AT3G05530.1 42.553 235 132 2 207 438 170 404 1.20e-57 203
Msa0073500 AT1G09100.1 42.128 235 136 0 472 706 161 395 5.03e-58 204
Msa0073500 AT1G09100.1 41.702 235 134 2 207 438 169 403 5.44e-56 199
Msa0073500 AT1G53780.1 43.333 240 136 0 464 703 323 562 1.21e-57 208
Msa0073500 AT1G53780.1 43.111 225 123 2 207 427 339 562 1.66e-54 199
Msa0073500 AT1G53780.4 43.333 240 136 0 464 703 323 562 1.21e-57 208
Msa0073500 AT1G53780.4 43.111 225 123 2 207 427 339 562 1.66e-54 199
Msa0073500 AT1G53780.3 43.333 240 136 0 464 703 322 561 1.21e-57 207
Msa0073500 AT1G53780.3 43.111 225 123 2 207 427 338 561 1.73e-54 199
Msa0073500 AT1G53780.2 43.333 240 136 0 464 703 344 583 1.42e-57 208
Msa0073500 AT1G53780.2 43.111 225 123 2 207 427 360 583 2.27e-54 199
Msa0073500 AT1G80350.1 38.944 303 164 6 469 763 227 516 1.09e-56 203
Msa0073500 AT1G80350.1 40.486 247 135 4 194 431 225 468 6.78e-46 172
Msa0073500 AT5G15250.1 41.949 236 134 2 476 709 217 451 5.49e-55 202
Msa0073500 AT5G15250.1 44.444 243 129 4 205 442 221 462 5.99e-53 196
Msa0073500 AT3G15120.1 40.942 276 151 3 206 469 717 992 1.29e-54 206
Msa0073500 AT3G15120.1 38.362 232 130 5 480 703 718 944 3.80e-42 167
Msa0073500 AT3G15120.2 40.942 276 151 3 206 469 727 1002 1.34e-54 206
Msa0073500 AT3G15120.2 38.362 232 130 5 480 703 728 954 3.71e-42 167
Msa0073500 AT5G42270.1 41.152 243 139 3 474 714 241 481 6.97e-54 199
Msa0073500 AT5G42270.1 42.975 242 133 4 205 443 247 486 2.53e-52 194
Msa0073500 AT2G30950.1 44.856 243 128 4 205 442 224 465 2.64e-53 197
Msa0073500 AT2G30950.1 41.991 231 131 2 476 704 220 449 3.16e-52 194
Msa0073500 AT2G30950.2 44.856 243 128 4 205 442 224 465 2.64e-53 197
Msa0073500 AT2G30950.2 41.991 231 131 2 476 704 220 449 3.16e-52 194
Msa0073500 AT2G30950.3 44.856 243 128 4 205 442 224 465 2.64e-53 197
Msa0073500 AT2G30950.3 41.991 231 131 2 476 704 220 449 3.16e-52 194
Msa0073500 AT2G30950.4 44.856 243 128 4 205 442 228 469 2.68e-53 197
Msa0073500 AT2G30950.4 41.991 231 131 2 476 704 224 453 3.32e-52 194
Msa0073500 AT1G50250.1 40.329 243 141 3 474 714 253 493 7.86e-53 196
Msa0073500 AT1G50250.1 42.975 242 133 4 205 443 259 498 5.11e-52 194
Msa0073500 AT1G06430.1 44.033 243 130 4 205 442 217 458 2.00e-52 194
Msa0073500 AT1G06430.1 41.558 231 132 2 476 704 213 442 2.97e-51 191
Msa0073500 AT1G06430.3 44.033 243 130 4 205 442 217 458 2.00e-52 194
Msa0073500 AT1G06430.3 41.558 231 132 2 476 704 213 442 2.97e-51 191
Msa0073500 AT1G06430.2 44.033 243 130 4 205 442 217 458 2.00e-52 194
Msa0073500 AT1G06430.2 41.558 231 132 2 476 704 213 442 2.97e-51 191
Msa0073500 AT2G34560.1 38.272 243 146 3 466 707 88 327 3.22e-52 187
Msa0073500 AT2G34560.1 34.328 268 168 5 205 467 100 364 8.69e-42 157
Msa0073500 AT2G34560.2 38.272 243 146 3 466 707 97 336 4.14e-52 187
Msa0073500 AT2G34560.2 34.328 268 168 5 205 467 109 373 7.84e-42 158
Msa0073500 AT5G15250.2 39.382 259 131 4 476 709 217 474 1.00e-51 189
Msa0073500 AT5G15250.2 40.602 266 129 5 205 442 221 485 1.13e-49 183
Msa0073500 AT3G47060.1 44.048 252 126 5 203 441 320 569 1.24e-51 194
Msa0073500 AT3G47060.1 37.091 275 161 5 477 740 321 594 5.59e-50 189
Msa0073500 AT5G08470.2 33.413 419 238 11 234 627 585 987 5.40e-51 194
Msa0073500 AT5G08470.2 42.484 153 86 1 205 355 841 993 3.96e-29 125
Msa0073500 AT5G58870.1 44.167 240 125 4 203 435 324 561 1.31e-50 191
Msa0073500 AT5G58870.1 38.197 233 140 3 477 706 325 556 1.92e-47 181
Msa0073500 AT3G02450.1 43.220 236 131 2 205 438 331 565 3.69e-50 187
Msa0073500 AT3G02450.1 36.397 272 157 5 462 723 317 582 9.78e-45 171
Msa0073500 AT3G16290.1 40.611 229 135 1 477 705 406 633 6.62e-50 189
Msa0073500 AT3G16290.1 40.161 249 138 3 191 429 386 633 2.35e-48 185
Msa0073500 AT4G23940.1 41.129 248 131 4 205 438 427 673 7.63e-50 190
Msa0073500 AT4G23940.1 40.343 233 130 3 482 706 431 662 2.95e-45 176
Msa0073500 AT5G53170.1 41.126 231 131 2 479 709 360 585 1.62e-49 187
Msa0073500 AT5G53170.1 43.498 223 124 2 207 429 361 581 8.13e-46 177
Msa0073500 AT1G07510.1 43.478 230 124 4 480 705 326 553 2.12e-48 184
Msa0073500 AT1G07510.1 40.078 257 145 5 194 442 313 568 4.80e-47 180
Msa0073500 AT2G45500.4 39.485 233 132 5 476 705 78 304 4.01e-48 174
Msa0073500 AT2G45500.4 40.773 233 132 4 200 429 75 304 4.07e-46 169
Msa0073500 AT2G45500.3 39.485 233 132 5 476 705 78 304 4.01e-48 174
Msa0073500 AT2G45500.3 40.773 233 132 4 200 429 75 304 4.07e-46 169
Msa0073500 AT4G28000.3 40.909 264 144 6 181 439 495 751 1.18e-47 182
Msa0073500 AT4G28000.3 35.563 284 168 7 479 752 518 796 1.26e-44 173
Msa0073500 AT4G28000.1 40.909 264 144 6 181 439 493 749 1.21e-47 182
Msa0073500 AT4G28000.1 35.439 285 169 7 479 753 516 795 1.45e-44 173
Msa0073500 AT4G28000.2 40.909 264 144 6 181 439 495 751 1.43e-47 182
Msa0073500 AT4G28000.2 35.439 285 169 7 479 753 518 797 1.62e-44 173
Msa0073500 AT4G02480.1 41.739 230 127 4 479 705 961 1186 4.14e-47 182
Msa0073500 AT4G02480.1 44.105 229 122 4 205 429 960 1186 8.61e-46 178
Msa0073500 AT2G45500.2 39.485 233 132 5 476 705 211 437 5.78e-47 175
Msa0073500 AT2G45500.2 40.773 233 132 4 200 429 208 437 6.37e-45 169
Msa0073500 AT2G45500.1 39.485 233 132 5 476 705 215 441 6.86e-47 175
Msa0073500 AT2G45500.1 40.773 233 132 4 200 429 212 441 7.99e-45 169
Msa0073500 AT1G02890.1 41.250 240 133 5 479 715 942 1176 7.81e-47 181
Msa0073500 AT1G02890.1 35.484 341 201 10 104 432 837 1170 6.31e-46 178
Msa0073500 AT2G45500.5 39.485 233 132 5 476 705 221 447 8.62e-47 174
Msa0073500 AT2G45500.5 40.773 233 132 4 200 429 218 447 7.78e-45 169
Msa0073500 AT2G27600.1 40.708 226 126 6 472 695 123 342 1.29e-46 172
Msa0073500 AT2G27600.1 36.325 234 141 6 205 434 129 358 3.80e-40 154
Msa0073500 AT4G27680.1 39.076 238 135 5 200 432 77 309 1.63e-46 171
Msa0073500 AT4G27680.1 37.500 248 143 6 483 726 86 325 2.36e-44 165
Msa0073500 AT1G50140.2 41.453 234 130 4 480 710 691 920 1.75e-46 179
Msa0073500 AT1G50140.2 41.921 229 127 4 205 429 689 915 1.01e-44 174
Msa0073500 AT1G50140.5 41.453 234 130 4 480 710 691 920 1.75e-46 179
Msa0073500 AT1G50140.5 41.921 229 127 4 205 429 689 915 1.01e-44 174
Msa0073500 AT1G50140.3 41.453 234 130 4 480 710 713 942 1.99e-46 179
Msa0073500 AT1G50140.3 41.921 229 127 4 205 429 711 937 1.12e-44 174
Msa0073500 AT1G50140.1 41.453 234 130 4 480 710 713 942 1.99e-46 179
Msa0073500 AT1G50140.1 41.921 229 127 4 205 429 711 937 1.12e-44 174
Msa0073500 AT1G50140.4 41.453 234 130 4 480 710 713 942 1.99e-46 179
Msa0073500 AT1G50140.4 41.921 229 127 4 205 429 711 937 1.12e-44 174
Msa0073500 AT2G26140.1 44.545 220 121 1 207 426 226 444 2.37e-46 177
Msa0073500 AT2G26140.1 38.938 226 134 2 477 702 223 444 1.53e-44 172
Msa0073500 AT2G29080.1 42.105 228 129 2 480 705 321 547 2.47e-46 178
Msa0073500 AT2G29080.1 41.152 243 135 4 194 430 308 548 5.85e-46 177
Msa0073500 AT1G64110.5 41.228 228 129 3 205 429 516 741 3.26e-46 178
Msa0073500 AT1G64110.5 34.082 267 166 5 477 737 515 777 6.54e-46 177
Msa0073500 AT1G64110.3 41.228 228 129 3 205 429 516 741 3.26e-46 178
Msa0073500 AT1G64110.3 34.082 267 166 5 477 737 515 777 6.54e-46 177
Msa0073500 AT1G64110.1 41.228 228 129 3 205 429 513 738 3.61e-46 178
Msa0073500 AT1G64110.1 34.082 267 166 5 477 737 512 774 6.31e-46 177
Msa0073500 AT1G64110.2 41.228 228 129 3 205 429 518 743 3.65e-46 178
Msa0073500 AT1G64110.2 34.082 267 166 5 477 737 517 779 7.32e-46 177
Msa0073500 AT1G64110.4 41.228 228 129 3 205 429 518 743 3.65e-46 178
Msa0073500 AT1G64110.4 34.082 267 166 5 477 737 517 779 7.32e-46 177
Msa0073500 AT5G53540.1 37.500 248 143 6 483 726 89 328 2.22e-45 168
Msa0073500 AT5G53540.1 32.298 322 190 7 204 504 83 397 4.16e-44 164
Msa0073500 AT5G52882.1 40.336 238 136 4 205 439 514 748 2.70e-45 175
Msa0073500 AT5G52882.1 37.551 245 142 6 478 716 514 753 1.11e-43 170
Msa0073500 AT4G04910.1 30.361 415 251 12 194 586 204 602 4.17e-45 174
Msa0073500 AT4G04910.1 39.091 220 120 4 504 710 239 457 2.86e-39 156
Msa0073500 AT4G24860.2 41.631 233 130 4 204 432 812 1042 5.48e-44 172
Msa0073500 AT4G24860.2 38.843 242 140 5 477 715 812 1048 2.29e-43 170
Msa0073500 AT4G24860.3 41.631 233 130 4 204 432 814 1044 5.49e-44 172
Msa0073500 AT4G24860.3 38.843 242 140 5 477 715 814 1050 2.53e-43 170
Msa0073500 AT3G19740.1 39.744 234 134 4 480 710 703 932 5.79e-44 172
Msa0073500 AT3G19740.1 41.048 229 129 4 205 429 701 927 1.25e-43 171
Msa0073500 AT4G24860.4 41.631 233 130 4 204 432 789 1019 5.86e-44 172
Msa0073500 AT4G24860.4 38.843 242 140 5 477 715 789 1025 2.35e-43 170
Msa0073500 AT4G24860.1 41.631 233 130 4 204 432 816 1046 5.96e-44 172
Msa0073500 AT4G24860.1 38.843 242 140 5 477 715 816 1052 2.72e-43 170
Msa0073500 AT3G27120.1 34.364 291 171 6 476 763 398 671 6.58e-44 169
Msa0073500 AT3G27120.1 36.299 281 165 8 192 466 387 659 3.56e-38 152
Msa0073500 AT5G64580.1 36.486 296 162 8 205 482 313 600 6.45e-43 168
Msa0073500 AT5G64580.1 37.687 268 155 5 474 730 309 575 4.51e-41 162
Msa0073500 AT1G62130.2 36.170 235 131 5 479 710 744 962 2.32e-36 148
Msa0073500 AT1G62130.2 35.918 245 136 7 205 445 743 970 6.33e-34 140
Msa0073500 AT1G62130.1 36.170 235 131 5 479 710 751 969 2.38e-36 148
Msa0073500 AT1G62130.1 35.918 245 136 7 205 445 750 977 6.44e-34 140
Msa0073500 AT1G02890.2 31.672 341 186 11 104 432 837 1142 2.07e-33 139
Msa0073500 AT1G02890.2 35.417 240 119 6 479 715 942 1148 1.13e-32 137
Msa0073500 AT1G45000.2 43.165 139 79 0 477 615 135 273 2.45e-33 132
Msa0073500 AT1G45000.2 45.652 138 72 2 205 339 136 273 1.91e-31 126
Msa0073500 AT1G79560.1 35.470 234 136 5 230 451 514 744 9.00e-33 137
Msa0073500 AT1G79560.1 30.745 322 191 8 397 705 418 720 4.72e-29 125
Msa0073500 AT1G79560.3 35.470 234 136 5 230 451 514 744 9.02e-33 137
Msa0073500 AT1G79560.3 30.745 322 191 8 397 705 418 720 5.11e-29 125
Msa0073500 AT1G79560.2 35.470 234 136 5 230 451 514 744 1.10e-32 136
Msa0073500 AT1G79560.2 30.745 322 191 8 397 705 418 720 5.71e-29 125
Msa0073500 AT4G04180.2 34.335 233 139 5 199 422 305 532 1.62e-31 131
Msa0073500 AT4G04180.2 33.913 230 133 7 479 698 312 532 5.79e-30 126
Msa0073500 AT4G04180.1 34.335 233 139 5 199 422 310 537 2.03e-31 130
Msa0073500 AT4G04180.1 33.913 230 133 7 479 698 317 537 6.68e-30 126
Msa0073500 AT3G04340.1 34.197 193 125 2 473 664 776 967 2.27e-27 120
Msa0073500 AT3G04340.1 33.163 196 123 4 219 407 795 989 2.44e-21 100
Msa0073500 AT2G18330.1 28.837 215 114 8 513 695 383 590 2.64e-14 77.4
Msa0073500 AT2G18330.1 30.675 163 108 4 241 402 384 542 8.13e-13 72.4
Msa0073500 AT4G36580.1 27.778 216 120 7 509 695 376 584 2.65e-14 77.4
Msa0073500 AT4G36580.1 31.469 143 93 4 241 382 381 519 6.68e-12 69.7
Msa0073500 AT5G17760.1 27.000 200 125 6 460 649 199 387 1.94e-13 74.3
Msa0073500 AT4G24710.3 30.220 182 103 7 507 667 201 379 4.65e-13 72.8
Msa0073500 AT4G24710.1 30.556 180 101 7 507 665 189 365 4.78e-13 72.8
Msa0073500 AT5G16930.1 31.333 150 96 6 241 388 397 541 1.57e-12 71.6
Msa0073500 AT5G16930.1 29.375 160 105 5 509 667 392 544 4.68e-12 70.1
Msa0073500 AT3G03060.1 30.201 149 99 4 241 388 385 529 4.00e-12 70.5
Msa0073500 AT3G03060.1 28.750 160 106 5 509 667 380 532 8.11e-12 69.3
Msa0073500 AT4G24710.4 32.168 143 75 6 507 628 201 342 4.36e-11 65.9
Msa0073500 AT4G24710.2 32.168 143 75 6 507 628 201 342 4.36e-11 65.9
Msa0073500 AT5G17740.1 27.011 174 108 4 487 649 217 382 4.72e-11 66.6
Msa0073500 AT5G17730.1 27.811 169 108 5 487 649 217 377 4.99e-11 66.2

Find 232 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGGGTTCTCTCAACTCTTT+TGG 0.167865 1_2:+47195256 Msa0073500:three_prime_UTR
CCATTAGTCTTCTCCCTCTT+TGG 0.192457 1_2:-47192939 None:intergenic
CCTGAGAAATTTGAGAAGTT+TGG 0.210931 1_2:+47193807 Msa0073500:CDS
CTCTTGACTGCTGCAAAGTT+TGG 0.216514 1_2:-47194913 None:intergenic
CGATTTCAGTACGGCGATTC+TGG 0.227132 1_2:+47190958 Msa0073500:CDS
ACCTTATTCATTCTTATCTT+TGG 0.233235 1_2:-47191296 None:intergenic
ACAATTATTTGGTCAGCTTC+TGG 0.235003 1_2:+47195219 Msa0073500:three_prime_UTR
TGAAGTTTCTCCATGGTTTC+AGG 0.238671 1_2:-47191055 None:intergenic
AAACATTTGAAACAATTATT+TGG 0.249754 1_2:+47195208 Msa0073500:three_prime_UTR
CATTGCCCCGTAAAAGATAT+TGG 0.277832 1_2:+47195160 Msa0073500:three_prime_UTR
GTGAAGGAGAGCCTGTTAAA+AGG 0.279427 1_2:+47192562 Msa0073500:CDS
CAATGTCCTGATGTCAAATA+TGG 0.279869 1_2:+47191368 Msa0073500:CDS
AGGTTGTGAGAAACAATCTT+AGG 0.285333 1_2:+47191315 Msa0073500:CDS
CCAAACTTCTCAAATTTCTC+AGG 0.287062 1_2:-47193807 None:intergenic
AATCAAAAGGTACATAAATT+AGG 0.295583 1_2:-47195096 None:intergenic
ATGCTGGTGGTGCTGCTGAC+AGG 0.307840 1_2:+47194281 Msa0073500:CDS
CATCAATGGTTTCATCTTCT+AGG 0.308644 1_2:-47193386 None:intergenic
GAAGTTTGCTTGACATTCAT+TGG 0.319366 1_2:-47193904 None:intergenic
GATACTATTGAAGGGGTTAC+TGG 0.323515 1_2:+47191419 Msa0073500:CDS
GCCAAAGATAAGAATGAATA+AGG 0.323786 1_2:+47191295 Msa0073500:CDS
AATAAGCTAATATTAGAAAT+AGG 0.328952 1_2:-47195377 None:intergenic
TCAGTGCATCAGAGAGAAAA+TGG 0.329410 1_2:+47193353 Msa0073500:CDS
TTTGATCGGGAGATTGATAT+TGG 0.332722 1_2:+47193095 Msa0073500:CDS
AGGAAGAAGATGAAGAGAAT+TGG 0.335553 1_2:-47190787 None:intergenic
GAATCAACTGCTTACAGAAA+TGG 0.338525 1_2:+47194309 Msa0073500:CDS
GACCCTGCTCTTCGGAGGTT+TGG 0.338552 1_2:+47193068 Msa0073500:CDS
AAGAAAACTGTGTTTATCAT+TGG 0.338719 1_2:+47194346 Msa0073500:CDS
AGATGAAGAGAATTGGGAAT+TGG 0.339271 1_2:-47190780 None:intergenic
AACATATCTCCCTTCCTAAC+TGG 0.340000 1_2:-47192444 None:intergenic
CCACAATTATTCAAGTCTAT+TGG 0.341498 1_2:+47192687 Msa0073500:CDS
AAAGATATTGGTACATCATT+AGG 0.342060 1_2:+47195172 Msa0073500:three_prime_UTR
GATTACGAATCGGAGGATTC+AGG 0.348248 1_2:-47190824 None:intergenic
ATTGTTGAATTTATTCTTCA+AGG 0.348848 1_2:-47195334 None:intergenic
TTGCAGCAGTCAAGAGGGTT+TGG 0.349332 1_2:+47194920 Msa0073500:CDS
TTGCAGAGAGGTAGTAGTTC+AGG 0.356705 1_2:+47194256 Msa0073500:intron
AGAAAACTGTGTTTATCATT+GGG 0.358046 1_2:+47194347 Msa0073500:CDS
GATGGCTCAGATTCGGGAAT+TGG 0.362974 1_2:+47192644 Msa0073500:CDS
CAATTATTTGGTCAGCTTCT+GGG 0.366317 1_2:+47195220 Msa0073500:three_prime_UTR
TTATCCTCTTCCATAGCTTC+AGG 0.367349 1_2:-47194782 None:intergenic
AAGAGCAGGGTCGATGCTAT+TGG 0.367446 1_2:-47193057 None:intergenic
GATGAAGAGAATTGGGAATT+GGG 0.372200 1_2:-47190779 None:intergenic
TCAGCTTCTGGGACCATATA+TGG 0.372203 1_2:+47195231 Msa0073500:three_prime_UTR
CCATACAACAAAATCCCTTT+TGG 0.374010 1_2:-47192720 None:intergenic
CCGTGCGCATGTAATTGTTA+TGG 0.381381 1_2:+47193019 Msa0073500:CDS
ACATTCATTGGCAATAGCTT+TGG 0.385260 1_2:-47193892 None:intergenic
CGCTTTCCATATTTGACATC+AGG 0.387613 1_2:-47191374 None:intergenic
TTCCCAGCTCTTGACCCTCA+TGG 0.390536 1_2:+47192983 Msa0073500:CDS
AATATCTTCCCAGCTGCAAT+TGG 0.390700 1_2:-47193641 None:intergenic
AAAGCAGATGGCTCAGATTC+GGG 0.391221 1_2:+47192638 Msa0073500:CDS
TCTTGACTGCTGCAAAGTTT+GGG 0.392250 1_2:-47194912 None:intergenic
GGAAGAAGATGAAGAGAATT+GGG 0.399256 1_2:-47190786 None:intergenic
CTCTTCATCTTCTTCCTCCA+TGG 0.406022 1_2:+47190793 Msa0073500:exon
CGTGCGCATGTAATTGTTAT+GGG 0.408023 1_2:+47193020 Msa0073500:CDS
CGAGCTGTTGCAAATGAAAC+TGG 0.410371 1_2:+47192774 Msa0073500:CDS
ATTGTTTCAAATGTTTAGAA+AGG 0.414115 1_2:-47195201 None:intergenic
AGAGAACCCGTGACCATATA+TGG 0.414197 1_2:-47195244 None:intergenic
CTACAATACTTACTGTTTCA+CGG 0.414643 1_2:-47193485 None:intergenic
GAAAGCAGATGGCTCAGATT+CGG 0.416171 1_2:+47192637 Msa0073500:CDS
CGTCCAGGTCGTAGTAGAGC+AGG 0.418938 1_2:-47194397 None:intergenic
CCAGCACTTGCAGTTGCAAA+AGG 0.423662 1_2:-47195001 None:intergenic
CAGCTCTTGACCCTCATGGA+TGG 0.429744 1_2:+47192987 Msa0073500:CDS
AATTGCAGCTGGGAAGATAT+TGG 0.431694 1_2:+47193643 Msa0073500:CDS
AGAGCAGGGTCGATGCTATT+GGG 0.432897 1_2:-47193056 None:intergenic
ATGTCAACATCCTTTGCAAT+GGG 0.437399 1_2:-47194499 None:intergenic
CCTGTGGATGATACTATTGA+AGG 0.437543 1_2:+47191410 Msa0073500:CDS
ATAAAGAAAGTGAGAGGGTT+TGG 0.439759 1_2:-47190734 None:intergenic
GTTCTGTTCTATGGTCCTCC+TGG 0.444694 1_2:+47193849 Msa0073500:CDS
TTCTATGGTCCTCCTGGTTG+TGG 0.449593 1_2:+47193855 Msa0073500:CDS
AGCTCTTGACCCTCATGGAT+GGG 0.452610 1_2:+47192988 Msa0073500:CDS
CTTCTCCCTCTTTGGAGCAA+TGG 0.454941 1_2:-47192931 None:intergenic
CTTCCAAACCTCCGAAGAGC+AGG 0.457920 1_2:-47193071 None:intergenic
GATGAGAAGTGTGGAATTCA+AGG 0.459086 1_2:+47192482 Msa0073500:CDS
ATTAAAGTCTTACCAGATCC+AGG 0.459464 1_2:-47192747 None:intergenic
GAGCTACTCACAATGTGGTT+TGG 0.459720 1_2:+47193945 Msa0073500:CDS
CTGCTCTTCGGAGGTTTGGA+AGG 0.463909 1_2:+47193072 Msa0073500:CDS
CATCCATGAGGGTCAAGAGC+TGG 0.467092 1_2:-47192986 None:intergenic
GTTTGGAATGTCACCTTCAA+AGG 0.467990 1_2:+47193824 Msa0073500:CDS
ACTGAAGCCTTGAGTGTACT+TGG 0.468487 1_2:-47194533 None:intergenic
GTCGGGAATCCTCGTCTGGA+AGG 0.469180 1_2:-47194444 None:intergenic
TCAAGACGTCCAACTTCATC+TGG 0.469206 1_2:-47193122 None:intergenic
AATTTCTCAGGGTGTTCCAC+TGG 0.471754 1_2:-47193795 None:intergenic
GGAGGTTTGGAAGGTTTGAT+CGG 0.472205 1_2:+47193081 Msa0073500:CDS
TGAAGATGACCTCTACAGTT+AGG 0.475290 1_2:+47195033 Msa0073500:CDS
GGCAGGACATTGAGAGAGAA+AGG 0.476041 1_2:+47194744 Msa0073500:intron
AATTGGTGGAACTGCCTTTG+AGG 0.476289 1_2:+47192661 Msa0073500:CDS
CAAACTTCTCAAATTTCTCA+GGG 0.479836 1_2:-47193806 None:intergenic
TCGAGGCATATCGTCCAGTT+AGG 0.479905 1_2:+47192430 Msa0073500:CDS
GAGGTTTGGAAGGTTTGATC+GGG 0.482378 1_2:+47193082 Msa0073500:CDS
CGGGAATCCTCGTCTGGAAG+GGG 0.484878 1_2:-47194442 None:intergenic
TCACAGAAAATCTCAGTGTC+AGG 0.485251 1_2:-47192543 None:intergenic
GCAAAGTTTGGGCAAAGGCT+TGG 0.485421 1_2:-47194901 None:intergenic
GTTAAGTATCTCAGCATCAA+TGG 0.488535 1_2:-47193400 None:intergenic
TGATGTCGGGAATCCTCGTC+TGG 0.489413 1_2:-47194448 None:intergenic
AGCTTTGAATATCTGATGTC+GGG 0.490617 1_2:-47194461 None:intergenic
TTGAAGTGCCCAATTGCAGC+TGG 0.490656 1_2:+47193632 Msa0073500:CDS
GAAAGTGAGAGGGTTTGGTT+AGG 0.491111 1_2:-47190729 None:intergenic
ATAGCATCGACCCTGCTCTT+CGG 0.492285 1_2:+47193060 Msa0073500:CDS
ATCAACTGATCCAGCCGTCC+AGG 0.492998 1_2:-47194412 None:intergenic
CTCATCAATGAAGATGATTG+AGG 0.493640 1_2:-47192901 None:intergenic
CGGTGATACAATTCTGATCA+AGG 0.494228 1_2:+47191087 Msa0073500:CDS
TGCTGGTGGTGCTGCTGACA+GGG 0.496100 1_2:+47194282 Msa0073500:CDS
CGCACTTCATCCTGAAACCA+TGG 0.497406 1_2:+47191045 Msa0073500:CDS
GAGGATCGTTTAGATGAGGT+TGG 0.497619 1_2:+47192591 Msa0073500:CDS
GTCAACATCCTTTGCAATGG+GGG 0.502418 1_2:-47194497 None:intergenic
GGTTGTGAGAAACAATCTTA+GGG 0.503444 1_2:+47191316 Msa0073500:CDS
ATTGGTGTGAAGCCACCAAA+AGG 0.504550 1_2:+47192705 Msa0073500:CDS
CTGCTGCAAAGTTTGGGCAA+AGG 0.506510 1_2:-47194906 None:intergenic
ACTTGATTCTATTGCAACTC+AGG 0.507015 1_2:+47194043 Msa0073500:CDS
GGTAGTAGTTCAGGAGATGC+TGG 0.507175 1_2:+47194265 Msa0073500:CDS
AACCACATTGTGAGTAGCTC+GGG 0.507234 1_2:-47193942 None:intergenic
GAACATTTCAGTACCGCACT+TGG 0.508014 1_2:+47193441 Msa0073500:CDS
CCAAAGAGGGAGAAGACTAA+TGG 0.512008 1_2:+47192939 Msa0073500:CDS
GCAAACTTCATTAGTATCAA+AGG 0.512270 1_2:+47193918 Msa0073500:CDS
GAGAAACTTCAACTCTTTCG+CGG 0.515636 1_2:+47191067 Msa0073500:CDS
TCGGGAATCCTCGTCTGGAA+GGG 0.516469 1_2:-47194443 None:intergenic
TCATCAATGAAGATGATTGA+GGG 0.516809 1_2:-47192900 None:intergenic
AAGCGATAATCCTGAAGCTA+TGG 0.517073 1_2:+47194772 Msa0073500:CDS
AGAGCAGGGTCTATAATGTC+AGG 0.519523 1_2:-47194382 None:intergenic
TGAAGGAGAGCCTGTTAAAA+GGG 0.519670 1_2:+47192563 Msa0073500:CDS
ATCCATGAGGGTCAAGAGCT+GGG 0.519780 1_2:-47192985 None:intergenic
GGCATATCGTCCAGTTAGGA+AGG 0.520634 1_2:+47192434 Msa0073500:CDS
TCATCAACGACGAGACGGTT+CGG 0.521611 1_2:-47190995 None:intergenic
TGCAAAAGGGTCAGCTGCAG+CGG 0.521922 1_2:-47194987 None:intergenic
GCAACAACACAATACTCAGC+AGG 0.522065 1_2:-47192519 None:intergenic
AGATTTGCCGACAACAGTGC+TGG 0.524300 1_2:+47194953 Msa0073500:CDS
TTTGGAATGTCACCTTCAAA+GGG 0.524681 1_2:+47193825 Msa0073500:CDS
TTTGCAACTGCAAGTGCTGG+CGG 0.527145 1_2:+47195004 Msa0073500:CDS
CCAATAGACTTGAATAATTG+TGG 0.528305 1_2:-47192687 None:intergenic
GATGTCAACATCCTTTGCAA+TGG 0.530887 1_2:-47194500 None:intergenic
CTGTGGATGATACTATTGAA+GGG 0.532423 1_2:+47191411 Msa0073500:CDS
GCCAGCTTTGACATGATCTC+AGG 0.533324 1_2:-47192822 None:intergenic
GGCTCAGATTCGGGAATTGG+TGG 0.533657 1_2:+47192647 Msa0073500:CDS
TCTACTACGACCTGGACGGC+TGG 0.534075 1_2:+47194402 Msa0073500:CDS
TTATTAGGGTAAGAAAAGAA+AGG 0.535683 1_2:+47191232 Msa0073500:intron
GGCAATAGCTTTGGCCAAGA+GGG 0.537496 1_2:-47193883 None:intergenic
GGATTCAGGTTGGTTAGCCA+TGG 0.537678 1_2:-47190810 None:intergenic
TATAATGTCAGGTCGATTAG+TGG 0.537689 1_2:-47194371 None:intergenic
AGTGCCACCAGCACTGTTGT+CGG 0.538206 1_2:-47194960 None:intergenic
ATACTATTGAAGGGGTTACT+GGG 0.538555 1_2:+47191420 Msa0073500:CDS
AAATGTTAAGCGAGAACTCC+AGG 0.539350 1_2:+47193675 Msa0073500:CDS
TGGTTGTGGTAAAACCCTCT+TGG 0.543623 1_2:+47193869 Msa0073500:CDS
ATATCTTCCCAGCTGCAATT+GGG 0.543834 1_2:-47193640 None:intergenic
GATATGTTCCTTGTGAGAGG+GGG 0.547635 1_2:+47192459 Msa0073500:CDS
AATAATTGTGGATGCCTCAA+AGG 0.548058 1_2:-47192675 None:intergenic
TCCTGAGATCATGTCAAAGC+TGG 0.550232 1_2:+47192821 Msa0073500:CDS
TAATCCTGAAGCTATGGAAG+AGG 0.550285 1_2:+47194778 Msa0073500:CDS
TGATTTAGAAAAGATTGCTA+AGG 0.550906 1_2:+47193275 Msa0073500:CDS
TACAGAAATGGACGGAATGT+CGG 0.552742 1_2:+47194321 Msa0073500:CDS
CAGCACTTGCAGTTGCAAAA+GGG 0.554347 1_2:-47195000 None:intergenic
AAGTGAATAAAGAAAGTGAG+AGG 0.556709 1_2:-47190740 None:intergenic
GAAAACTGTGTTTATCATTG+GGG 0.557648 1_2:+47194348 Msa0073500:CDS
CAGCTTTGAATATCTGATGT+CGG 0.557757 1_2:-47194462 None:intergenic
GCCTGTTAAAAGGGAAGATG+AGG 0.557817 1_2:+47192572 Msa0073500:CDS
AGATGAAGTTGGACGTCTTG+AGG 0.558009 1_2:+47193124 Msa0073500:CDS
GAGATCATGTCAAAGCTGGC+TGG 0.559220 1_2:+47192825 Msa0073500:CDS
AAACCACATTGTGAGTAGCT+CGG 0.560700 1_2:-47193943 None:intergenic
ACTGTTTCACGGAGAGCAGA+AGG 0.564595 1_2:-47193474 None:intergenic
CCATAACAATTACATGCGCA+CGG 0.568519 1_2:-47193019 None:intergenic
TAGCATACTTGCAAGCGCGC+TGG 0.572912 1_2:-47194579 None:intergenic
TGCTGAGATACTTAACTCAA+TGG 0.573485 1_2:+47193407 Msa0073500:CDS
AACAATCTTAGGGTTAGACT+TGG 0.576162 1_2:+47191326 Msa0073500:CDS
CTGGGACCATATATGGTCAC+GGG 0.576187 1_2:+47195238 Msa0073500:three_prime_UTR
TTGGTGTGAAGCCACCAAAA+GGG 0.584782 1_2:+47192706 Msa0073500:CDS
CAAACTTTGCAGCAGTCAAG+AGG 0.585980 1_2:+47194914 Msa0073500:CDS
GCGAGTTCATATTCTTCCTG+TGG 0.586206 1_2:+47191394 Msa0073500:CDS
GTTGGTTATGATGATGTTGG+TGG 0.586235 1_2:+47192609 Msa0073500:CDS
TCTGGGACCATATATGGTCA+CGG 0.589674 1_2:+47195237 Msa0073500:three_prime_UTR
GGAGATATGTTCCTTGTGAG+AGG 0.590793 1_2:+47192456 Msa0073500:CDS
AGAGGATAATGAAGACGATG+AGG 0.590957 1_2:+47194796 Msa0073500:CDS
AACGAAGCGCGATTTCAGTA+CGG 0.592595 1_2:+47190949 Msa0073500:CDS
AGATATGTTCCTTGTGAGAG+GGG 0.593916 1_2:+47192458 Msa0073500:CDS
GAGGTTGGTTATGATGATGT+TGG 0.597279 1_2:+47192606 Msa0073500:CDS
AAAGAGTTGAAGTTTCTCCA+TGG 0.598637 1_2:-47191062 None:intergenic
TTCAGGTTGGTTAGCCATGG+AGG 0.600074 1_2:-47190807 None:intergenic
GACCCTGCTCTACTACGACC+TGG 0.600678 1_2:+47194394 Msa0073500:CDS
GAGATATGTTCCTTGTGAGA+GGG 0.602152 1_2:+47192457 Msa0073500:CDS
ATCAGCACCAACATAACCAT+GGG 0.603295 1_2:-47193301 None:intergenic
AGATGAGGATCGTTTAGATG+AGG 0.604669 1_2:+47192587 Msa0073500:CDS
GCATCGACCCTGCTCTTCGG+AGG 0.608582 1_2:+47193063 Msa0073500:CDS
TGTGGATGATACTATTGAAG+GGG 0.608629 1_2:+47191412 Msa0073500:CDS
CAGCTTCATCAACGACGAGA+CGG 0.608880 1_2:-47191000 None:intergenic
TTAAAGTCTTACCAGATCCA+GGG 0.612077 1_2:-47192746 None:intergenic
TGCAGCTGGGAAGATATTGG+TGG 0.612280 1_2:+47193646 Msa0073500:CDS
ATTGGTGTACCAGATGAAGT+TGG 0.615281 1_2:+47193113 Msa0073500:CDS
GGGAATCCTCGTCTGGAAGG+GGG 0.617154 1_2:-47194441 None:intergenic
GCAGACTGTTCAATATCCAG+TGG 0.617349 1_2:+47193779 Msa0073500:intron
AAGGAAACCCATGGTTATGT+TGG 0.618105 1_2:+47193294 Msa0073500:CDS
AGACTCCATTGCTCCAAAGA+GGG 0.619206 1_2:+47192926 Msa0073500:CDS
CATAACAATTACATGCGCAC+GGG 0.621798 1_2:-47193018 None:intergenic
ACGAATCGGAGGATTCAGGT+TGG 0.622076 1_2:-47190820 None:intergenic
TAGACTCCATTGCTCCAAAG+AGG 0.622591 1_2:+47192925 Msa0073500:CDS
GTCCAGGTCGTAGTAGAGCA+GGG 0.623019 1_2:-47194396 None:intergenic
GAGTGAAAGTAATCTGAGGA+AGG 0.624269 1_2:+47192851 Msa0073500:CDS
AGTGAATAAAGAAAGTGAGA+GGG 0.625061 1_2:-47190739 None:intergenic
GCTCTTGCCAAGTACACTCA+AGG 0.625937 1_2:+47194526 Msa0073500:CDS
AAACTTTGCAGCAGTCAAGA+GGG 0.627316 1_2:+47194915 Msa0073500:CDS
CCTTCAATAGTATCATCCAC+AGG 0.627350 1_2:-47191410 None:intergenic
GGATTTAAGCCCATCCATGA+GGG 0.627404 1_2:-47192997 None:intergenic
TGGAATGTCACCTTCAAAGG+GGG 0.628082 1_2:+47193827 Msa0073500:CDS
TATAAGAGAAAACATCGAGA+AGG 0.629031 1_2:+47194600 Msa0073500:CDS
AAGATTGCTAAGGAAACCCA+TGG 0.630077 1_2:+47193285 Msa0073500:CDS
TGGCAATAGCTTTGGCCAAG+AGG 0.630157 1_2:-47193884 None:intergenic
AACTGTAGACCTAACTGTAG+AGG 0.630782 1_2:-47195042 None:intergenic
AGAAAGTGAGGCTAATGTGA+GGG 0.635263 1_2:+47193968 Msa0073500:CDS
TTCCAAACCTCCGAAGAGCA+GGG 0.636312 1_2:-47193070 None:intergenic
TCATCAAAGAAAAGAACACA+TGG 0.639306 1_2:-47194020 None:intergenic
GCATATCGTCCAGTTAGGAA+GGG 0.644679 1_2:+47192435 Msa0073500:CDS
AATCAGCACCAACATAACCA+TGG 0.646369 1_2:-47193302 None:intergenic
CTGCTCTACTACGACCTGGA+CGG 0.648155 1_2:+47194398 Msa0073500:CDS
AAGTACACTCAAGGCTTCAG+TGG 0.648697 1_2:+47194535 Msa0073500:CDS
AATGTGGTTTGGAGAAAGTG+AGG 0.650668 1_2:+47193956 Msa0073500:CDS
GGAAGAGGATTACGAATCGG+AGG 0.651891 1_2:-47190831 None:intergenic
TGAAGTGCCCAATTGCAGCT+GGG 0.653466 1_2:+47193633 Msa0073500:CDS
TTTGCCGACAACAGTGCTGG+TGG 0.655107 1_2:+47194956 Msa0073500:CDS
ATATGTTCCTTGTGAGAGGG+GGG 0.655286 1_2:+47192460 Msa0073500:CDS
TAAAGTCTTACCAGATCCAG+GGG 0.658292 1_2:-47192745 None:intergenic
GGGATTTAAGCCCATCCATG+AGG 0.663629 1_2:-47192998 None:intergenic
GAGAAAGTGAGGCTAATGTG+AGG 0.663629 1_2:+47193967 Msa0073500:CDS
CAACAACACAATACTCAGCA+GGG 0.666697 1_2:-47192518 None:intergenic
TGGTGGTGTTAGAAAGCAGA+TGG 0.677645 1_2:+47192626 Msa0073500:CDS
TGTCAACATCCTTTGCAATG+GGG 0.677894 1_2:-47194498 None:intergenic
GTGAGAGTGAAAGTAATCTG+AGG 0.683292 1_2:+47192847 Msa0073500:CDS
AGGACATTGAGAGAGAAAGG+AGG 0.691679 1_2:+47194747 Msa0073500:intron
TTGGAATGTCACCTTCAAAG+GGG 0.692077 1_2:+47193826 Msa0073500:CDS
CAACTGCTTACAGAAATGGA+CGG 0.693068 1_2:+47194313 Msa0073500:CDS
AGTAGTTCAGGAGATGCTGG+TGG 0.701928 1_2:+47194268 Msa0073500:CDS
GTCCCGAGCTACTCACAATG+TGG 0.708759 1_2:+47193940 Msa0073500:CDS
AGGATTGCTTGATCCAAGTG+CGG 0.712751 1_2:-47193454 None:intergenic
TGAGATACTTAACTCAATGG+CGG 0.713084 1_2:+47193410 Msa0073500:CDS
TAACTGGACGATATGCCTCG+AGG 0.731678 1_2:-47192428 None:intergenic
TGTTAAGCGAGAACTCCAGG+AGG 0.754733 1_2:+47193678 Msa0073500:CDS
AAAGTCTTACCAGATCCAGG+GGG 0.808828 1_2:-47192744 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGATAATATATTTTTTTGA+TGG + chr1_2:47192152-47192171 Msa0073500:intron 10.0%
!!! TTTTGTTTATTTTTTCAGTA+AGG + chr1_2:47190925-47190944 Msa0073500:intron 15.0%
!!! TTTGTTTATTTTTTCAGTAA+GGG + chr1_2:47190926-47190945 Msa0073500:intron 15.0%
!! AAAAACTGTTCAATAAAAAA+GGG - chr1_2:47191611-47191630 None:intergenic 15.0%
!!! TTTTCTATTATTTAATTTGC+AGG + chr1_2:47193251-47193270 Msa0073500:intron 15.0%
!!! TTTAATTTAAACAGTTAATG+AGG - chr1_2:47194218-47194237 None:intergenic 15.0%
!!! AAACATTTGAAACAATTATT+TGG + chr1_2:47195208-47195227 Msa0073500:three_prime_UTR 15.0%
!! AATAAGCTAATATTAGAAAT+AGG - chr1_2:47195380-47195399 None:intergenic 15.0%
!! AAATTGAATTGAGAAATTGA+AGG - chr1_2:47190876-47190895 None:intergenic 20.0%
!!! CTTTTTACAAAAGGATTTTA+GGG - chr1_2:47191155-47191174 None:intergenic 20.0%
!!! TCTTTTTACAAAAGGATTTT+AGG - chr1_2:47191156-47191175 None:intergenic 20.0%
!!! AAATCAGATCTTTTTACAAA+AGG - chr1_2:47191164-47191183 None:intergenic 20.0%
!!! TGATTCATTGTTGATTTATT+AGG + chr1_2:47191217-47191236 Msa0073500:intron 20.0%
!!! GATTCATTGTTGATTTATTA+GGG + chr1_2:47191218-47191237 Msa0073500:intron 20.0%
!! TATCCAAACAATAATCAAAA+CGG - chr1_2:47191554-47191573 None:intergenic 20.0%
!! GAAAAACTGTTCAATAAAAA+AGG - chr1_2:47191612-47191631 None:intergenic 20.0%
!!! TTGTATCATAGATGTATTTT+TGG + chr1_2:47192047-47192066 Msa0073500:intron 20.0%
!!! TTGATAAGATATTTTGACAA+TGG + chr1_2:47192084-47192103 Msa0073500:intron 20.0%
!! ATATTATCATGAATCAACAA+TGG - chr1_2:47192142-47192161 None:intergenic 20.0%
!! AAATGAATATCTATTCACAA+GGG - chr1_2:47192229-47192248 None:intergenic 20.0%
!! AAAATGAATATCTATTCACA+AGG - chr1_2:47192230-47192249 None:intergenic 20.0%
!!! TTTGTTCTGTCATTTTTTAT+TGG + chr1_2:47192324-47192343 Msa0073500:intron 20.0%
!! TAGATAAATAACACAACTTA+GGG - chr1_2:47193209-47193228 None:intergenic 20.0%
!! TTTATCTGATAATCTAATCA+TGG - chr1_2:47194085-47194104 None:intergenic 20.0%
!!! AATCAAAAGGTACATAAATT+AGG - chr1_2:47195099-47195118 None:intergenic 20.0%
!!! TACCTTTTGATTTGTTTTTA+TGG + chr1_2:47195107-47195126 Msa0073500:three_prime_UTR 20.0%
!! TTCCATAAAAACAAATCAAA+AGG - chr1_2:47195112-47195131 None:intergenic 20.0%
!! ATTGTTTCAAATGTTTAGAA+AGG - chr1_2:47195204-47195223 None:intergenic 20.0%
!! ATTGTTGAATTTATTCTTCA+AGG - chr1_2:47195337-47195356 None:intergenic 20.0%
!!! TTTTGAATTAGGGTTAGTTT+GGG - chr1_2:47191132-47191151 None:intergenic 25.0%
!!! GATTTTAGGGTTTTGAATTA+GGG - chr1_2:47191142-47191161 None:intergenic 25.0%
! TATGTGATTAGTATGTGATT+AGG + chr1_2:47191185-47191204 Msa0073500:intron 25.0%
! TTATTAGGGTAAGAAAAGAA+AGG + chr1_2:47191232-47191251 Msa0073500:intron 25.0%
! ACCTTATTCATTCTTATCTT+TGG - chr1_2:47191299-47191318 None:intergenic 25.0%
! ATCCAAACAATAATCAAAAC+GGG - chr1_2:47191553-47191572 None:intergenic 25.0%
!! AGCACAAAGCTAATTTTATT+TGG + chr1_2:47191683-47191702 Msa0073500:intron 25.0%
!!! ATTGTATCATTGCTTTGTTT+TGG + chr1_2:47192114-47192133 Msa0073500:intron 25.0%
!!! TTGTATCATTGCTTTGTTTT+GGG + chr1_2:47192115-47192134 Msa0073500:intron 25.0%
! TGTTCATTGAAGTTAAATGT+TGG + chr1_2:47192284-47192303 Msa0073500:intron 25.0%
! ATAAGCTGCAAAAGAAAAAA+AGG - chr1_2:47192406-47192425 None:intergenic 25.0%
!!! TCATATTTTTTGTATGGATG+CGG - chr1_2:47193154-47193173 None:intergenic 25.0%
!!! CAAGCTTCATATTTTTTGTA+TGG - chr1_2:47193160-47193179 None:intergenic 25.0%
! AGATAAATAACACAACTTAG+GGG - chr1_2:47193208-47193227 None:intergenic 25.0%
! CTAGATAAATAACACAACTT+AGG - chr1_2:47193210-47193229 None:intergenic 25.0%
! TGATTTAGAAAAGATTGCTA+AGG + chr1_2:47193275-47193294 Msa0073500:CDS 25.0%
! CATAAAAGATTATTGAGCAA+TGG - chr1_2:47193562-47193581 None:intergenic 25.0%
! AAGAAAACTGTGTTTATCAT+TGG + chr1_2:47194346-47194365 Msa0073500:CDS 25.0%
! AGAAAACTGTGTTTATCATT+GGG + chr1_2:47194347-47194366 Msa0073500:CDS 25.0%
! ATAGTGTACATAAGTCAAAA+GGG - chr1_2:47194656-47194675 None:intergenic 25.0%
! AATAGTGTACATAAGTCAAA+AGG - chr1_2:47194657-47194676 None:intergenic 25.0%
!! TTCTGTAGAACTTTTCTAAT+TGG + chr1_2:47194680-47194699 Msa0073500:intron 25.0%
!!! TGATTTGTTTTTATGGAATC+TGG + chr1_2:47195114-47195133 Msa0073500:three_prime_UTR 25.0%
!! TGATGTACCAATATCTTTTA+CGG - chr1_2:47195170-47195189 None:intergenic 25.0%
! AAAGATATTGGTACATCATT+AGG + chr1_2:47195172-47195191 Msa0073500:three_prime_UTR 25.0%
!! TTTGGTTAGGTTTTATAGTG+TGG - chr1_2:47190719-47190738 None:intergenic 30.0%
AGTGAATAAAGAAAGTGAGA+GGG - chr1_2:47190742-47190761 None:intergenic 30.0%
AAGTGAATAAAGAAAGTGAG+AGG - chr1_2:47190743-47190762 None:intergenic 30.0%
!!! GTTTTGAATTAGGGTTAGTT+TGG - chr1_2:47191133-47191152 None:intergenic 30.0%
!!! GGATTTTAGGGTTTTGAATT+AGG - chr1_2:47191143-47191162 None:intergenic 30.0%
GCCAAAGATAAGAATGAATA+AGG + chr1_2:47191295-47191314 Msa0073500:CDS 30.0%
! ATAAGGTTAGTTAGACTGTT+TGG - chr1_2:47191954-47191973 None:intergenic 30.0%
AACAACAGTATTCTTTACGA+AGG - chr1_2:47192186-47192205 None:intergenic 30.0%
CCAATAGACTTGAATAATTG+TGG - chr1_2:47192690-47192709 None:intergenic 30.0%
CCACAATTATTCAAGTCTAT+TGG + chr1_2:47192687-47192706 Msa0073500:CDS 30.0%
! GCTTTCTTTTTCTGTATCAA+TGG + chr1_2:47192798-47192817 Msa0073500:CDS 30.0%
TCATCAATGAAGATGATTGA+GGG - chr1_2:47192903-47192922 None:intergenic 30.0%
GATAAATAACACAACTTAGG+GGG - chr1_2:47193207-47193226 None:intergenic 30.0%
CTACAATACTTACTGTTTCA+CGG - chr1_2:47193488-47193507 None:intergenic 30.0%
AAAGATTATTGAGCAATGGA+GGG - chr1_2:47193558-47193577 None:intergenic 30.0%
AAAAGATTATTGAGCAATGG+AGG - chr1_2:47193559-47193578 None:intergenic 30.0%
AAAGATGGAGTTACAAAGTT+TGG - chr1_2:47193595-47193614 None:intergenic 30.0%
CAAACTTCTCAAATTTCTCA+GGG - chr1_2:47193809-47193828 None:intergenic 30.0%
GCAAACTTCATTAGTATCAA+AGG + chr1_2:47193918-47193937 Msa0073500:CDS 30.0%
TCATCAAAGAAAAGAACACA+TGG - chr1_2:47194023-47194042 None:intergenic 30.0%
CTCATGAAGAGGAAATTTAT+CGG + chr1_2:47194138-47194157 Msa0073500:intron 30.0%
AAACAATTACAGGAGCTTAA+AGG - chr1_2:47194195-47194214 None:intergenic 30.0%
GTTAATGAGGAAACAATTAC+AGG - chr1_2:47194205-47194224 None:intergenic 30.0%
GAAAACTGTGTTTATCATTG+GGG + chr1_2:47194348-47194367 Msa0073500:CDS 30.0%
TATAAGAGAAAACATCGAGA+AGG + chr1_2:47194600-47194619 Msa0073500:CDS 30.0%
AAAAGGGAATGAGAGAAAAA+AGG - chr1_2:47194640-47194659 None:intergenic 30.0%
!!! CAGTTTGCTGTCTTTTATTT+TGG + chr1_2:47195060-47195079 Msa0073500:three_prime_UTR 30.0%
! ATGTACCAATATCTTTTACG+GGG - chr1_2:47195168-47195187 None:intergenic 30.0%
! GATGTACCAATATCTTTTAC+GGG - chr1_2:47195169-47195188 None:intergenic 30.0%
!! GTTAGGTTTTATAGTGTGGT+GGG - chr1_2:47190715-47190734 None:intergenic 35.0%
ATAAAGAAAGTGAGAGGGTT+TGG - chr1_2:47190737-47190756 None:intergenic 35.0%
GATGAAGAGAATTGGGAATT+GGG - chr1_2:47190782-47190801 None:intergenic 35.0%
AGATGAAGAGAATTGGGAAT+TGG - chr1_2:47190783-47190802 None:intergenic 35.0%
GGAAGAAGATGAAGAGAATT+GGG - chr1_2:47190789-47190808 None:intergenic 35.0%
AGGAAGAAGATGAAGAGAAT+TGG - chr1_2:47190790-47190809 None:intergenic 35.0%
AAAGAGTTGAAGTTTCTCCA+TGG - chr1_2:47191065-47191084 None:intergenic 35.0%
AGGTTGTGAGAAACAATCTT+AGG + chr1_2:47191315-47191334 Msa0073500:CDS 35.0%
GGTTGTGAGAAACAATCTTA+GGG + chr1_2:47191316-47191335 Msa0073500:CDS 35.0%
AACAATCTTAGGGTTAGACT+TGG + chr1_2:47191326-47191345 Msa0073500:CDS 35.0%
CAATGTCCTGATGTCAAATA+TGG + chr1_2:47191368-47191387 Msa0073500:CDS 35.0%
CTGTGGATGATACTATTGAA+GGG + chr1_2:47191411-47191430 Msa0073500:CDS 35.0%
TGTGGATGATACTATTGAAG+GGG + chr1_2:47191412-47191431 Msa0073500:CDS 35.0%
ATACTATTGAAGGGGTTACT+GGG + chr1_2:47191420-47191439 Msa0073500:CDS 35.0%
!!! GACCCGTTTTGATTATTGTT+TGG + chr1_2:47191548-47191567 Msa0073500:intron 35.0%
AAGATTAAAGACAAGCGCTT+GGG - chr1_2:47191724-47191743 None:intergenic 35.0%
AAAGATTAAAGACAAGCGCT+TGG - chr1_2:47191725-47191744 None:intergenic 35.0%
TGAGCTAACTAACTGACATA+AGG - chr1_2:47191971-47191990 None:intergenic 35.0%
AAGGGTCAATGTACAGAAAA+GGG - chr1_2:47192211-47192230 None:intergenic 35.0%
AATAATTGTGGATGCCTCAA+AGG - chr1_2:47192678-47192697 None:intergenic 35.0%
! TACAACAAAATCCCTTTTGG+TGG - chr1_2:47192720-47192739 None:intergenic 35.0%
! CCATACAACAAAATCCCTTT+TGG - chr1_2:47192723-47192742 None:intergenic 35.0%
!! CCAAAAGGGATTTTGTTGTA+TGG + chr1_2:47192720-47192739 Msa0073500:CDS 35.0%
TTAAAGTCTTACCAGATCCA+GGG - chr1_2:47192749-47192768 None:intergenic 35.0%
ATTAAAGTCTTACCAGATCC+AGG - chr1_2:47192750-47192769 None:intergenic 35.0%
CTCATCAATGAAGATGATTG+AGG - chr1_2:47192904-47192923 None:intergenic 35.0%
TTTGATCGGGAGATTGATAT+TGG + chr1_2:47193095-47193114 Msa0073500:CDS 35.0%
CATCAATGGTTTCATCTTCT+AGG - chr1_2:47193389-47193408 None:intergenic 35.0%
GTTAAGTATCTCAGCATCAA+TGG - chr1_2:47193403-47193422 None:intergenic 35.0%
TGCTGAGATACTTAACTCAA+TGG + chr1_2:47193407-47193426 Msa0073500:CDS 35.0%
TGAGATACTTAACTCAATGG+CGG + chr1_2:47193410-47193429 Msa0073500:CDS 35.0%
TGTTTCTTATCATCAGCTTC+TGG + chr1_2:47193733-47193752 Msa0073500:intron 35.0%
GTTTCTTATCATCAGCTTCT+GGG + chr1_2:47193734-47193753 Msa0073500:intron 35.0%
CCAAACTTCTCAAATTTCTC+AGG - chr1_2:47193810-47193829 None:intergenic 35.0%
CCTGAGAAATTTGAGAAGTT+TGG + chr1_2:47193807-47193826 Msa0073500:CDS 35.0%
! TTTGGAATGTCACCTTCAAA+GGG + chr1_2:47193825-47193844 Msa0073500:CDS 35.0%
ACATTCATTGGCAATAGCTT+TGG - chr1_2:47193895-47193914 None:intergenic 35.0%
! GAAGTTTGCTTGACATTCAT+TGG - chr1_2:47193907-47193926 None:intergenic 35.0%
! GAAATTTTTGACAAAGCTCG+TGG + chr1_2:47193990-47194009 Msa0073500:CDS 35.0%
ACTTGATTCTATTGCAACTC+AGG + chr1_2:47194043-47194062 Msa0073500:CDS 35.0%
AATCTAATCATGGCTCGATA+TGG - chr1_2:47194075-47194094 None:intergenic 35.0%
GAATCAACTGCTTACAGAAA+TGG + chr1_2:47194309-47194328 Msa0073500:CDS 35.0%
TATAATGTCAGGTCGATTAG+TGG - chr1_2:47194374-47194393 None:intergenic 35.0%
!! AGCTTTGAATATCTGATGTC+GGG - chr1_2:47194464-47194483 None:intergenic 35.0%
!! CAGCTTTGAATATCTGATGT+CGG - chr1_2:47194465-47194484 None:intergenic 35.0%
ATGTCAACATCCTTTGCAAT+GGG - chr1_2:47194502-47194521 None:intergenic 35.0%
!! AACATCGAGAAGGTACATTT+TGG + chr1_2:47194610-47194629 Msa0073500:intron 35.0%
!! ACATCGAGAAGGTACATTTT+GGG + chr1_2:47194611-47194630 Msa0073500:intron 35.0%
ACAATTATTTGGTCAGCTTC+TGG + chr1_2:47195219-47195238 Msa0073500:three_prime_UTR 35.0%
CAATTATTTGGTCAGCTTCT+GGG + chr1_2:47195220-47195239 Msa0073500:three_prime_UTR 35.0%
!! GGTTAGGTTTTATAGTGTGG+TGG - chr1_2:47190716-47190735 None:intergenic 40.0%
AGTGGAAGAGGATTACGAAT+CGG - chr1_2:47190837-47190856 None:intergenic 40.0%
GGAATTGAGATCTGAGAAAG+TGG - chr1_2:47190855-47190874 None:intergenic 40.0%
TGAAGTTTCTCCATGGTTTC+AGG - chr1_2:47191058-47191077 None:intergenic 40.0%
GAGAAACTTCAACTCTTTCG+CGG + chr1_2:47191067-47191086 Msa0073500:CDS 40.0%
CGGTGATACAATTCTGATCA+AGG + chr1_2:47191087-47191106 Msa0073500:CDS 40.0%
CGCTTTCCATATTTGACATC+AGG - chr1_2:47191377-47191396 None:intergenic 40.0%
CCTTCAATAGTATCATCCAC+AGG - chr1_2:47191413-47191432 None:intergenic 40.0%
CCTGTGGATGATACTATTGA+AGG + chr1_2:47191410-47191429 Msa0073500:CDS 40.0%
GATACTATTGAAGGGGTTAC+TGG + chr1_2:47191419-47191438 Msa0073500:CDS 40.0%
!!! CTTTTTTCAAGCCTCGTCTA+GGG - chr1_2:47192014-47192033 None:intergenic 40.0%
!!! TCTTTTTTCAAGCCTCGTCT+AGG - chr1_2:47192015-47192034 None:intergenic 40.0%
CAAGGGTCAATGTACAGAAA+AGG - chr1_2:47192212-47192231 None:intergenic 40.0%
! TTTTGCAGCTTATTTCCTCG+AGG + chr1_2:47192413-47192432 Msa0073500:intron 40.0%
AACATATCTCCCTTCCTAAC+TGG - chr1_2:47192447-47192466 None:intergenic 40.0%
GAGATATGTTCCTTGTGAGA+GGG + chr1_2:47192457-47192476 Msa0073500:CDS 40.0%
AGATATGTTCCTTGTGAGAG+GGG + chr1_2:47192458-47192477 Msa0073500:CDS 40.0%
! GATGAGAAGTGTGGAATTCA+AGG + chr1_2:47192482-47192501 Msa0073500:CDS 40.0%
CAACAACACAATACTCAGCA+GGG - chr1_2:47192521-47192540 None:intergenic 40.0%
TCACAGAAAATCTCAGTGTC+AGG - chr1_2:47192546-47192565 None:intergenic 40.0%
! GACACTGAGATTTTCTGTGA+AGG + chr1_2:47192546-47192565 Msa0073500:CDS 40.0%
TGAAGGAGAGCCTGTTAAAA+GGG + chr1_2:47192563-47192582 Msa0073500:CDS 40.0%
! TCCTCATCTTCCCTTTTAAC+AGG - chr1_2:47192576-47192595 None:intergenic 40.0%
AGATGAGGATCGTTTAGATG+AGG + chr1_2:47192587-47192606 Msa0073500:CDS 40.0%
! GAGGTTGGTTATGATGATGT+TGG + chr1_2:47192606-47192625 Msa0073500:CDS 40.0%
! GTTGGTTATGATGATGTTGG+TGG + chr1_2:47192609-47192628 Msa0073500:CDS 40.0%
TAAAGTCTTACCAGATCCAG+GGG - chr1_2:47192748-47192767 None:intergenic 40.0%
GTGAGAGTGAAAGTAATCTG+AGG + chr1_2:47192847-47192866 Msa0073500:CDS 40.0%
GAGTGAAAGTAATCTGAGGA+AGG + chr1_2:47192851-47192870 Msa0073500:CDS 40.0%
CATAACAATTACATGCGCAC+GGG - chr1_2:47193021-47193040 None:intergenic 40.0%
CCATAACAATTACATGCGCA+CGG - chr1_2:47193022-47193041 None:intergenic 40.0%
CGTGCGCATGTAATTGTTAT+GGG + chr1_2:47193020-47193039 Msa0073500:CDS 40.0%
ATTGGTGTACCAGATGAAGT+TGG + chr1_2:47193113-47193132 Msa0073500:CDS 40.0%
AAGATTGCTAAGGAAACCCA+TGG + chr1_2:47193285-47193304 Msa0073500:CDS 40.0%
AAGGAAACCCATGGTTATGT+TGG + chr1_2:47193294-47193313 Msa0073500:CDS 40.0%
ATCAGCACCAACATAACCAT+GGG - chr1_2:47193304-47193323 None:intergenic 40.0%
AATCAGCACCAACATAACCA+TGG - chr1_2:47193305-47193324 None:intergenic 40.0%
TCAGTGCATCAGAGAGAAAA+TGG + chr1_2:47193353-47193372 Msa0073500:CDS 40.0%
TCCATCTTTGCTAATGAACC+AGG + chr1_2:47193606-47193625 Msa0073500:intron 40.0%
ACCTGGTTCATTAGCAAAGA+TGG - chr1_2:47193610-47193629 None:intergenic 40.0%
ATATCTTCCCAGCTGCAATT+GGG - chr1_2:47193643-47193662 None:intergenic 40.0%
AATATCTTCCCAGCTGCAAT+TGG - chr1_2:47193644-47193663 None:intergenic 40.0%
AATTGCAGCTGGGAAGATAT+TGG + chr1_2:47193643-47193662 Msa0073500:CDS 40.0%
AAATGTTAAGCGAGAACTCC+AGG + chr1_2:47193675-47193694 Msa0073500:CDS 40.0%
! GTTTGGAATGTCACCTTCAA+AGG + chr1_2:47193824-47193843 Msa0073500:CDS 40.0%
TTGGAATGTCACCTTCAAAG+GGG + chr1_2:47193826-47193845 Msa0073500:CDS 40.0%
AAACCACATTGTGAGTAGCT+CGG - chr1_2:47193946-47193965 None:intergenic 40.0%
! AATGTGGTTTGGAGAAAGTG+AGG + chr1_2:47193956-47193975 Msa0073500:CDS 40.0%
AGAAAGTGAGGCTAATGTGA+GGG + chr1_2:47193968-47193987 Msa0073500:CDS 40.0%
GCACACTAATTAGCACTCTA+TGG - chr1_2:47194173-47194192 None:intergenic 40.0%
TACTACCTCTCTGCAAGATA+AGG - chr1_2:47194252-47194271 None:intergenic 40.0%
CAACTGCTTACAGAAATGGA+CGG + chr1_2:47194313-47194332 Msa0073500:CDS 40.0%
TACAGAAATGGACGGAATGT+CGG + chr1_2:47194321-47194340 Msa0073500:CDS 40.0%
TGTCAACATCCTTTGCAATG+GGG - chr1_2:47194501-47194520 None:intergenic 40.0%
GATGTCAACATCCTTTGCAA+TGG - chr1_2:47194503-47194522 None:intergenic 40.0%
!! CATCGAGAAGGTACATTTTG+GGG + chr1_2:47194612-47194631 Msa0073500:intron 40.0%
! TTTTCTCCCTAACTTCTCTG+TGG + chr1_2:47194723-47194742 Msa0073500:intron 40.0%
AAGCGATAATCCTGAAGCTA+TGG + chr1_2:47194772-47194791 Msa0073500:CDS 40.0%
TAATCCTGAAGCTATGGAAG+AGG + chr1_2:47194778-47194797 Msa0073500:CDS 40.0%
TTATCCTCTTCCATAGCTTC+AGG - chr1_2:47194785-47194804 None:intergenic 40.0%
AGAGGATAATGAAGACGATG+AGG + chr1_2:47194796-47194815 Msa0073500:CDS 40.0%
TCTTGACTGCTGCAAAGTTT+GGG - chr1_2:47194915-47194934 None:intergenic 40.0%
AAACTTTGCAGCAGTCAAGA+GGG + chr1_2:47194915-47194934 Msa0073500:CDS 40.0%
TGAAGATGACCTCTACAGTT+AGG + chr1_2:47195033-47195052 Msa0073500:CDS 40.0%
AACTGTAGACCTAACTGTAG+AGG - chr1_2:47195045-47195064 None:intergenic 40.0%
CATTGCCCCGTAAAAGATAT+TGG + chr1_2:47195160-47195179 Msa0073500:three_prime_UTR 40.0%
! GAAAGTGAGAGGGTTTGGTT+AGG - chr1_2:47190732-47190751 None:intergenic 45.0%
CTCTTCATCTTCTTCCTCCA+TGG + chr1_2:47190793-47190812 Msa0073500:exon 45.0%
GATTACGAATCGGAGGATTC+AGG - chr1_2:47190827-47190846 None:intergenic 45.0%
GAGATCTGAGAAAGTGGAAG+AGG - chr1_2:47190849-47190868 None:intergenic 45.0%
AACGAAGCGCGATTTCAGTA+CGG + chr1_2:47190949-47190968 Msa0073500:CDS 45.0%
GCGAGTTCATATTCTTCCTG+TGG + chr1_2:47191394-47191413 Msa0073500:CDS 45.0%
GCATATCGTCCAGTTAGGAA+GGG + chr1_2:47192435-47192454 Msa0073500:CDS 45.0%
GGAGATATGTTCCTTGTGAG+AGG + chr1_2:47192456-47192475 Msa0073500:CDS 45.0%
GATATGTTCCTTGTGAGAGG+GGG + chr1_2:47192459-47192478 Msa0073500:CDS 45.0%
ATATGTTCCTTGTGAGAGGG+GGG + chr1_2:47192460-47192479 Msa0073500:CDS 45.0%
GCAACAACACAATACTCAGC+AGG - chr1_2:47192522-47192541 None:intergenic 45.0%
GTGAAGGAGAGCCTGTTAAA+AGG + chr1_2:47192562-47192581 Msa0073500:CDS 45.0%
GCCTGTTAAAAGGGAAGATG+AGG + chr1_2:47192572-47192591 Msa0073500:CDS 45.0%
GAGGATCGTTTAGATGAGGT+TGG + chr1_2:47192591-47192610 Msa0073500:CDS 45.0%
! TGGTGGTGTTAGAAAGCAGA+TGG + chr1_2:47192626-47192645 Msa0073500:CDS 45.0%
GAAAGCAGATGGCTCAGATT+CGG + chr1_2:47192637-47192656 Msa0073500:CDS 45.0%
AAAGCAGATGGCTCAGATTC+GGG + chr1_2:47192638-47192657 Msa0073500:CDS 45.0%
AATTGGTGGAACTGCCTTTG+AGG + chr1_2:47192661-47192680 Msa0073500:CDS 45.0%
ATTGGTGTGAAGCCACCAAA+AGG + chr1_2:47192705-47192724 Msa0073500:CDS 45.0%
TTGGTGTGAAGCCACCAAAA+GGG + chr1_2:47192706-47192725 Msa0073500:CDS 45.0%
!! ATTTTGTTGTATGGACCCCC+TGG + chr1_2:47192729-47192748 Msa0073500:CDS 45.0%
AAAGTCTTACCAGATCCAGG+GGG - chr1_2:47192747-47192766 None:intergenic 45.0%
CGAGCTGTTGCAAATGAAAC+TGG + chr1_2:47192774-47192793 Msa0073500:CDS 45.0%
TCCTGAGATCATGTCAAAGC+TGG + chr1_2:47192821-47192840 Msa0073500:CDS 45.0%
TAGACTCCATTGCTCCAAAG+AGG + chr1_2:47192925-47192944 Msa0073500:CDS 45.0%
AGACTCCATTGCTCCAAAGA+GGG + chr1_2:47192926-47192945 Msa0073500:CDS 45.0%
!! CCATTAGTCTTCTCCCTCTT+TGG - chr1_2:47192942-47192961 None:intergenic 45.0%
CCAAAGAGGGAGAAGACTAA+TGG + chr1_2:47192939-47192958 Msa0073500:CDS 45.0%
GGATTTAAGCCCATCCATGA+GGG - chr1_2:47193000-47193019 None:intergenic 45.0%
CCGTGCGCATGTAATTGTTA+TGG + chr1_2:47193019-47193038 Msa0073500:CDS 45.0%
GGAGGTTTGGAAGGTTTGAT+CGG + chr1_2:47193081-47193100 Msa0073500:CDS 45.0%
GAGGTTTGGAAGGTTTGATC+GGG + chr1_2:47193082-47193101 Msa0073500:CDS 45.0%
TCAAGACGTCCAACTTCATC+TGG - chr1_2:47193125-47193144 None:intergenic 45.0%
AGATGAAGTTGGACGTCTTG+AGG + chr1_2:47193124-47193143 Msa0073500:CDS 45.0%
GAACATTTCAGTACCGCACT+TGG + chr1_2:47193441-47193460 Msa0073500:CDS 45.0%
AGGATTGCTTGATCCAAGTG+CGG - chr1_2:47193457-47193476 None:intergenic 45.0%
AATTGGGCACTTCAACAACC+TGG - chr1_2:47193627-47193646 None:intergenic 45.0%
GCAGACTGTTCAATATCCAG+TGG + chr1_2:47193779-47193798 Msa0073500:intron 45.0%
! AATTTCTCAGGGTGTTCCAC+TGG - chr1_2:47193798-47193817 None:intergenic 45.0%
TGGAATGTCACCTTCAAAGG+GGG + chr1_2:47193827-47193846 Msa0073500:CDS 45.0%
TAGAACAGAACCCCCTTTGA+AGG - chr1_2:47193840-47193859 None:intergenic 45.0%
TCAAAGGGGGTTCTGTTCTA+TGG + chr1_2:47193840-47193859 Msa0073500:CDS 45.0%
! AAGAGGGTTTTACCACAACC+AGG - chr1_2:47193870-47193889 None:intergenic 45.0%
TGGTTGTGGTAAAACCCTCT+TGG + chr1_2:47193869-47193888 Msa0073500:CDS 45.0%
AACCACATTGTGAGTAGCTC+GGG - chr1_2:47193945-47193964 None:intergenic 45.0%
GAGCTACTCACAATGTGGTT+TGG + chr1_2:47193945-47193964 Msa0073500:CDS 45.0%
GAGAAAGTGAGGCTAATGTG+AGG + chr1_2:47193967-47193986 Msa0073500:CDS 45.0%
ATGTGCTTCTGCTCATGAAG+AGG + chr1_2:47194127-47194146 Msa0073500:intron 45.0%
TTGCAGAGAGGTAGTAGTTC+AGG + chr1_2:47194256-47194275 Msa0073500:intron 45.0%
AGAGCAGGGTCTATAATGTC+AGG - chr1_2:47194385-47194404 None:intergenic 45.0%
! TGCAATGGGGGATTTTCTCA+AGG - chr1_2:47194488-47194507 None:intergenic 45.0%
GAGAAAATCCCCCATTGCAA+AGG + chr1_2:47194489-47194508 Msa0073500:CDS 45.0%
GTCAACATCCTTTGCAATGG+GGG - chr1_2:47194500-47194519 None:intergenic 45.0%
ACTGAAGCCTTGAGTGTACT+TGG - chr1_2:47194536-47194555 None:intergenic 45.0%
AAGTACACTCAAGGCTTCAG+TGG + chr1_2:47194535-47194554 Msa0073500:CDS 45.0%
AGGACATTGAGAGAGAAAGG+AGG + chr1_2:47194747-47194766 Msa0073500:intron 45.0%
CTCTTGACTGCTGCAAAGTT+TGG - chr1_2:47194916-47194935 None:intergenic 45.0%
CAAACTTTGCAGCAGTCAAG+AGG + chr1_2:47194914-47194933 Msa0073500:CDS 45.0%
CAGCACTTGCAGTTGCAAAA+GGG - chr1_2:47195003-47195022 None:intergenic 45.0%
!! TCAGCTTCTGGGACCATATA+TGG + chr1_2:47195231-47195250 Msa0073500:three_prime_UTR 45.0%
! TCTGGGACCATATATGGTCA+CGG + chr1_2:47195237-47195256 Msa0073500:three_prime_UTR 45.0%
AGAGAACCCGTGACCATATA+TGG - chr1_2:47195247-47195266 None:intergenic 45.0%
! ACGGGTTCTCTCAACTCTTT+TGG + chr1_2:47195256-47195275 Msa0073500:three_prime_UTR 45.0%
! CGGGTTCTCTCAACTCTTTT+GGG + chr1_2:47195257-47195276 Msa0073500:three_prime_UTR 45.0%
! GGGTTCTCTCAACTCTTTTG+GGG + chr1_2:47195258-47195277 Msa0073500:three_prime_UTR 45.0%
!! TTCAGGTTGGTTAGCCATGG+AGG - chr1_2:47190810-47190829 None:intergenic 50.0%
!! GGATTCAGGTTGGTTAGCCA+TGG - chr1_2:47190813-47190832 None:intergenic 50.0%
ACGAATCGGAGGATTCAGGT+TGG - chr1_2:47190823-47190842 None:intergenic 50.0%
GGAAGAGGATTACGAATCGG+AGG - chr1_2:47190834-47190853 None:intergenic 50.0%
CGATTTCAGTACGGCGATTC+TGG + chr1_2:47190958-47190977 Msa0073500:CDS 50.0%
TCATCAACGACGAGACGGTT+CGG - chr1_2:47190998-47191017 None:intergenic 50.0%
CAGCTTCATCAACGACGAGA+CGG - chr1_2:47191003-47191022 None:intergenic 50.0%
CGCACTTCATCCTGAAACCA+TGG + chr1_2:47191045-47191064 Msa0073500:CDS 50.0%
! CGTCTAGGGCTTGTTTGGAT+TGG - chr1_2:47192000-47192019 None:intergenic 50.0%
ATCCAAACAAGCCCTAGACG+AGG + chr1_2:47192000-47192019 Msa0073500:intron 50.0%
TAACTGGACGATATGCCTCG+AGG - chr1_2:47192431-47192450 None:intergenic 50.0%
TCGAGGCATATCGTCCAGTT+AGG + chr1_2:47192430-47192449 Msa0073500:CDS 50.0%
GGCATATCGTCCAGTTAGGA+AGG + chr1_2:47192434-47192453 Msa0073500:CDS 50.0%
GATGGCTCAGATTCGGGAAT+TGG + chr1_2:47192644-47192663 Msa0073500:CDS 50.0%
! GCCAGCTTTGACATGATCTC+AGG - chr1_2:47192825-47192844 None:intergenic 50.0%
GAGATCATGTCAAAGCTGGC+TGG + chr1_2:47192825-47192844 Msa0073500:CDS 50.0%
!! CTTCTCCCTCTTTGGAGCAA+TGG - chr1_2:47192934-47192953 None:intergenic 50.0%
ATCCATGAGGGTCAAGAGCT+GGG - chr1_2:47192988-47193007 None:intergenic 50.0%
AGCTCTTGACCCTCATGGAT+GGG + chr1_2:47192988-47193007 Msa0073500:CDS 50.0%
GGGATTTAAGCCCATCCATG+AGG - chr1_2:47193001-47193020 None:intergenic 50.0%
AGAGCAGGGTCGATGCTATT+GGG - chr1_2:47193059-47193078 None:intergenic 50.0%
AAGAGCAGGGTCGATGCTAT+TGG - chr1_2:47193060-47193079 None:intergenic 50.0%
!! ATAGCATCGACCCTGCTCTT+CGG + chr1_2:47193060-47193079 Msa0073500:CDS 50.0%
TTCCAAACCTCCGAAGAGCA+GGG - chr1_2:47193073-47193092 None:intergenic 50.0%
ACTGTTTCACGGAGAGCAGA+AGG - chr1_2:47193477-47193496 None:intergenic 50.0%
! TTGAAGTGCCCAATTGCAGC+TGG + chr1_2:47193632-47193651 Msa0073500:CDS 50.0%
! TGAAGTGCCCAATTGCAGCT+GGG + chr1_2:47193633-47193652 Msa0073500:CDS 50.0%
TGCAGCTGGGAAGATATTGG+TGG + chr1_2:47193646-47193665 Msa0073500:CDS 50.0%
TGTTAAGCGAGAACTCCAGG+AGG + chr1_2:47193678-47193697 Msa0073500:CDS 50.0%
CAAGAGCTTGAGTTACCTCC+TGG - chr1_2:47193696-47193715 None:intergenic 50.0%
GTTCTGTTCTATGGTCCTCC+TGG + chr1_2:47193849-47193868 Msa0073500:CDS 50.0%
TTCTATGGTCCTCCTGGTTG+TGG + chr1_2:47193855-47193874 Msa0073500:CDS 50.0%
! AGGGTTTTACCACAACCAGG+AGG - chr1_2:47193867-47193886 None:intergenic 50.0%
!! GGCAATAGCTTTGGCCAAGA+GGG - chr1_2:47193886-47193905 None:intergenic 50.0%
!! TGGCAATAGCTTTGGCCAAG+AGG - chr1_2:47193887-47193906 None:intergenic 50.0%
GTGTGCCTTATCTTGCAGAG+AGG + chr1_2:47194244-47194263 Msa0073500:intron 50.0%
GGTAGTAGTTCAGGAGATGC+TGG + chr1_2:47194265-47194284 Msa0073500:CDS 50.0%
AGTAGTTCAGGAGATGCTGG+TGG + chr1_2:47194268-47194287 Msa0073500:CDS 50.0%
TTATATCCCCCTTCCAGACG+AGG + chr1_2:47194435-47194454 Msa0073500:CDS 50.0%
GCTCTTGCCAAGTACACTCA+AGG + chr1_2:47194526-47194545 Msa0073500:CDS 50.0%
GTCCTGCCACAGAGAAGTTA+GGG - chr1_2:47194732-47194751 None:intergenic 50.0%
TGTCCTGCCACAGAGAAGTT+AGG - chr1_2:47194733-47194752 None:intergenic 50.0%
GGCAGGACATTGAGAGAGAA+AGG + chr1_2:47194744-47194763 Msa0073500:intron 50.0%
GCAAAGTTTGGGCAAAGGCT+TGG - chr1_2:47194904-47194923 None:intergenic 50.0%
CTGCTGCAAAGTTTGGGCAA+AGG - chr1_2:47194909-47194928 None:intergenic 50.0%
TTGCAGCAGTCAAGAGGGTT+TGG + chr1_2:47194920-47194939 Msa0073500:CDS 50.0%
AGATTTGCCGACAACAGTGC+TGG + chr1_2:47194953-47194972 Msa0073500:CDS 50.0%
CCAGCACTTGCAGTTGCAAA+AGG - chr1_2:47195004-47195023 None:intergenic 50.0%
! CCTTTTGCAACTGCAAGTGC+TGG + chr1_2:47195001-47195020 Msa0073500:CDS 50.0%
!! TTTGCAACTGCAAGTGCTGG+CGG + chr1_2:47195004-47195023 Msa0073500:CDS 50.0%
CTGGGACCATATATGGTCAC+GGG + chr1_2:47195238-47195257 Msa0073500:three_prime_UTR 50.0%
! AGCCTCGTCTAGGGCTTGTT+TGG - chr1_2:47192005-47192024 None:intergenic 55.0%
TTCTCATCCCCCCTCTCACA+AGG - chr1_2:47192470-47192489 None:intergenic 55.0%
GGCTCAGATTCGGGAATTGG+TGG + chr1_2:47192647-47192666 Msa0073500:CDS 55.0%
TTGTATGGACCCCCTGGATC+TGG + chr1_2:47192735-47192754 Msa0073500:CDS 55.0%
TTCCCAGCTCTTGACCCTCA+TGG + chr1_2:47192983-47193002 Msa0073500:CDS 55.0%
CATCCATGAGGGTCAAGAGC+TGG - chr1_2:47192989-47193008 None:intergenic 55.0%
CAGCTCTTGACCCTCATGGA+TGG + chr1_2:47192987-47193006 Msa0073500:CDS 55.0%
CTTCCAAACCTCCGAAGAGC+AGG - chr1_2:47193074-47193093 None:intergenic 55.0%
CTGCTCTTCGGAGGTTTGGA+AGG + chr1_2:47193072-47193091 Msa0073500:CDS 55.0%
GTCCCGAGCTACTCACAATG+TGG + chr1_2:47193940-47193959 Msa0073500:CDS 55.0%
GTCCAGGTCGTAGTAGAGCA+GGG - chr1_2:47194399-47194418 None:intergenic 55.0%
CTGCTCTACTACGACCTGGA+CGG + chr1_2:47194398-47194417 Msa0073500:CDS 55.0%
ATCAACTGATCCAGCCGTCC+AGG - chr1_2:47194415-47194434 None:intergenic 55.0%
TCGGGAATCCTCGTCTGGAA+GGG - chr1_2:47194446-47194465 None:intergenic 55.0%
TGATGTCGGGAATCCTCGTC+TGG - chr1_2:47194451-47194470 None:intergenic 55.0%
TAGCATACTTGCAAGCGCGC+TGG - chr1_2:47194582-47194601 None:intergenic 55.0%
CTCCCTAACTTCTCTGTGGC+AGG + chr1_2:47194727-47194746 Msa0073500:intron 55.0%
! TTTGCCGACAACAGTGCTGG+TGG + chr1_2:47194956-47194975 Msa0073500:CDS 55.0%
AGTGCCACCAGCACTGTTGT+CGG - chr1_2:47194963-47194982 None:intergenic 55.0%
TGCAAAAGGGTCAGCTGCAG+CGG - chr1_2:47194990-47195009 None:intergenic 55.0%
GAGAGGGGGGATGAGAAGTG+TGG + chr1_2:47192473-47192492 Msa0073500:CDS 60.0%
GACCCTGCTCTTCGGAGGTT+TGG + chr1_2:47193068-47193087 Msa0073500:CDS 60.0%
!! ATGCTGGTGGTGCTGCTGAC+AGG + chr1_2:47194281-47194300 Msa0073500:CDS 60.0%
!! TGCTGGTGGTGCTGCTGACA+GGG + chr1_2:47194282-47194301 Msa0073500:CDS 60.0%
GACCCTGCTCTACTACGACC+TGG + chr1_2:47194394-47194413 Msa0073500:CDS 60.0%
CGTCCAGGTCGTAGTAGAGC+AGG - chr1_2:47194400-47194419 None:intergenic 60.0%
TCTACTACGACCTGGACGGC+TGG + chr1_2:47194402-47194421 Msa0073500:CDS 60.0%
GGGAATCCTCGTCTGGAAGG+GGG - chr1_2:47194444-47194463 None:intergenic 60.0%
CGGGAATCCTCGTCTGGAAG+GGG - chr1_2:47194445-47194464 None:intergenic 60.0%
GTCGGGAATCCTCGTCTGGA+AGG - chr1_2:47194447-47194466 None:intergenic 60.0%
! GCATCGACCCTGCTCTTCGG+AGG + chr1_2:47193063-47193082 Msa0073500:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 47190683 47195417 47190683 ID=Msa0073500;Name=Msa0073500
chr1_2 mRNA 47190683 47195417 47190683 ID=Msa0073500-mRNA-1;Parent=Msa0073500;Name=Msa0073500-mRNA-1;_AED=0.07;_eAED=0.07;_QI=129|1|1|1|1|1|9|363|810
chr1_2 exon 47190683 47190840 47190683 ID=Msa0073500-mRNA-1:exon:14345;Parent=Msa0073500-mRNA-1
chr1_2 exon 47190943 47191108 47190943 ID=Msa0073500-mRNA-1:exon:14346;Parent=Msa0073500-mRNA-1
chr1_2 exon 47191239 47191467 47191239 ID=Msa0073500-mRNA-1:exon:14347;Parent=Msa0073500-mRNA-1
chr1_2 exon 47192421 47193187 47192421 ID=Msa0073500-mRNA-1:exon:14348;Parent=Msa0073500-mRNA-1
chr1_2 exon 47193273 47193494 47193273 ID=Msa0073500-mRNA-1:exon:14349;Parent=Msa0073500-mRNA-1
chr1_2 exon 47193628 47193699 47193628 ID=Msa0073500-mRNA-1:exon:14350;Parent=Msa0073500-mRNA-1
chr1_2 exon 47193783 47194064 47193783 ID=Msa0073500-mRNA-1:exon:14351;Parent=Msa0073500-mRNA-1
chr1_2 exon 47194262 47194621 47194262 ID=Msa0073500-mRNA-1:exon:14352;Parent=Msa0073500-mRNA-1
chr1_2 exon 47194749 47195417 47194749 ID=Msa0073500-mRNA-1:exon:14353;Parent=Msa0073500-mRNA-1
chr1_2 five_prime_UTR 47190683 47190811 47190683 ID=Msa0073500-mRNA-1:five_prime_utr;Parent=Msa0073500-mRNA-1
chr1_2 CDS 47190812 47190840 47190812 ID=Msa0073500-mRNA-1:cds;Parent=Msa0073500-mRNA-1
chr1_2 CDS 47190943 47191108 47190943 ID=Msa0073500-mRNA-1:cds;Parent=Msa0073500-mRNA-1
chr1_2 CDS 47191239 47191467 47191239 ID=Msa0073500-mRNA-1:cds;Parent=Msa0073500-mRNA-1
chr1_2 CDS 47192421 47193187 47192421 ID=Msa0073500-mRNA-1:cds;Parent=Msa0073500-mRNA-1
chr1_2 CDS 47193273 47193494 47193273 ID=Msa0073500-mRNA-1:cds;Parent=Msa0073500-mRNA-1
chr1_2 CDS 47193628 47193699 47193628 ID=Msa0073500-mRNA-1:cds;Parent=Msa0073500-mRNA-1
chr1_2 CDS 47193783 47194064 47193783 ID=Msa0073500-mRNA-1:cds;Parent=Msa0073500-mRNA-1
chr1_2 CDS 47194262 47194621 47194262 ID=Msa0073500-mRNA-1:cds;Parent=Msa0073500-mRNA-1
chr1_2 CDS 47194749 47195054 47194749 ID=Msa0073500-mRNA-1:cds;Parent=Msa0073500-mRNA-1
chr1_2 three_prime_UTR 47195055 47195417 47195055 ID=Msa0073500-mRNA-1:three_prime_utr;Parent=Msa0073500-mRNA-1
Gene Sequence

>Msa0073500

ATGGCTAACCAACCTGAATCCTCCGATTCTAAGGGAACGAAGCGCGATTTCAGTACGGCGATTCTGGAACGCAAAAAGTCACCGAACCGTCTCGTCGTTGATGAAGCTGTCAACGATGACAACTCAGTTGTCGCACTTCATCCTGAAACCATGGAGAAACTTCAACTCTTTCGCGGTGATACAATTCTGATCAAGGGTAAGAAAAGAAAGGATACGATTTGTATTGCACTTGCTGATGAAACATGTGAAGAGCCAAAGATAAGAATGAATAAGGTTGTGAGAAACAATCTTAGGGTTAGACTTGGTGATGTTGTTTCTGTTCATCAATGTCCTGATGTCAAATATGGAAAGCGAGTTCATATTCTTCCTGTGGATGATACTATTGAAGGGGTTACTGGGAATCTCTTTGATGCTTACTTAAAACCTTATTTCCTCGAGGCATATCGTCCAGTTAGGAAGGGAGATATGTTCCTTGTGAGAGGGGGGATGAGAAGTGTGGAATTCAAGGTTATCGAGTGTGACCCTGCTGAGTATTGTGTTGTTGCACCTGACACTGAGATTTTCTGTGAAGGAGAGCCTGTTAAAAGGGAAGATGAGGATCGTTTAGATGAGGTTGGTTATGATGATGTTGGTGGTGTTAGAAAGCAGATGGCTCAGATTCGGGAATTGGTGGAACTGCCTTTGAGGCATCCACAATTATTCAAGTCTATTGGTGTGAAGCCACCAAAAGGGATTTTGTTGTATGGACCCCCTGGATCTGGTAAGACTTTAATTGCACGAGCTGTTGCAAATGAAACTGGTGCTTTCTTTTTCTGTATCAATGGTCCTGAGATCATGTCAAAGCTGGCTGGTGAGAGTGAAAGTAATCTGAGGAAGGCATTCGAAGAAGCTGAGAAGAATGCACCCTCAATCATCTTCATTGATGAGATAGACTCCATTGCTCCAAAGAGGGAGAAGACTAATGGTGAAGTTGAGCGAAGAATTGTTTCCCAGCTCTTGACCCTCATGGATGGGCTTAAATCCCGTGCGCATGTAATTGTTATGGGAGCAACAAATCGTCCCAATAGCATCGACCCTGCTCTTCGGAGGTTTGGAAGGTTTGATCGGGAGATTGATATTGGTGTACCAGATGAAGTTGGACGTCTTGAGGTTCTCCGCATCCATACAAAAAATATGAAGCTTGCAGAAGATGTTGATTTAGAAAAGATTGCTAAGGAAACCCATGGTTATGTTGGTGCTGATTTAGCTGCTTTGTGTACTGAAGCTGCACTTCAGTGCATCAGAGAGAAAATGGATGTGATTGACCTAGAAGATGAAACCATTGATGCTGAGATACTTAACTCAATGGCGGTCACAAATGAACATTTCAGTACCGCACTTGGATCAAGCAATCCTTCTGCTCTCCGTGAAACAGTTGTTGAAGTGCCCAATTGCAGCTGGGAAGATATTGGTGGTCTTGAAAATGTTAAGCGAGAACTCCAGGAGACTGTTCAATATCCAGTGGAACACCCTGAGAAATTTGAGAAGTTTGGAATGTCACCTTCAAAGGGGGTTCTGTTCTATGGTCCTCCTGGTTGTGGTAAAACCCTCTTGGCCAAAGCTATTGCCAATGAATGTCAAGCAAACTTCATTAGTATCAAAGGTCCCGAGCTACTCACAATGTGGTTTGGAGAAAGTGAGGCTAATGTGAGGGAAATTTTTGACAAAGCTCGTGGTTCTGCTCCATGTGTTCTTTTCTTTGATGAACTTGATTCTATTGCAACTCAGAGAGGTAGTAGTTCAGGAGATGCTGGTGGTGCTGCTGACAGGGTTTTGAATCAACTGCTTACAGAAATGGACGGAATGTCGGCAAAGAAAACTGTGTTTATCATTGGGGCCACTAATCGACCTGACATTATAGACCCTGCTCTACTACGACCTGGACGGCTGGATCAGTTGATTTATATCCCCCTTCCAGACGAGGATTCCCGACATCAGATATTCAAAGCTGCCTTGAGAAAATCCCCCATTGCAAAGGATGTTGACATCAGAGCTCTTGCCAAGTACACTCAAGGCTTCAGTGGTGCTGATATTACTGAGATTTGCCAGCGCGCTTGCAAGTATGCTATAAGAGAAAACATCGAGAAGGACATTGAGAGAGAAAGGAGGAGAAGCGATAATCCTGAAGCTATGGAAGAGGATAATGAAGACGATGAGGTAGCTGAAATCAAAGCAGCACATTTTGAAGAATCGATGAAGTATGCACGAAGAAGTGTTAGTGACGCTGACATTCGCAAGTACCAAGCCTTTGCCCAAACTTTGCAGCAGTCAAGAGGGTTTGGATCTGAATTCAGATTTGCCGACAACAGTGCTGGTGGCACTACTGCCGCTGCAGCTGACCCTTTTGCAACTGCAAGTGCTGGCGGAGCTGATGAAGATGACCTCTACAGTTAG
Protein sequence

>Msa0073500

MANQPESSDSKGTKRDFSTAILERKKSPNRLVVDEAVNDDNSVVALHPETMEKLQLFRGDTILIKGKKRKDTICIALADETCEEPKIRMNKVVRNNLRVRLGDVVSVHQCPDVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDMFLVRGGMRSVEFKVIECDPAEYCVVAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKIAKETHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFSTALGSSNPSALRETVVEVPNCSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKAALRKSPIAKDVDIRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSDNPEAMEEDNEDDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFADNSAGGTTAAAADPFATASAGGADEDDLYS*