AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0121630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0121630 MtrunA17_Chr1g0180791 95.455 792 3 1 1 759 1 792 0.0 1535
Msa0121630 MtrunA17_Chr7g0264521 92.967 782 20 3 1 748 1 781 0.0 1471
Msa0121630 MtrunA17_Chr2g0327121 86.962 790 67 3 3 756 2 791 0.0 1402
Msa0121630 MtrunA17_Chr2g0327231 94.118 272 13 1 334 605 238 506 4.71e-179 523
Msa0121630 MtrunA17_Chr2g0327231 72.901 262 64 3 40 298 19 276 9.90e-122 375
Msa0121630 MtrunA17_Chr2g0327231 45.625 160 84 1 172 328 346 505 1.41e-41 159
Msa0121630 MtrunA17_Chr2g0327231 43.956 91 47 1 446 536 154 240 3.89e-18 88.6
Msa0121630 MtrunA17_Chr2g0277831 43.986 582 289 8 174 735 245 809 3.09e-154 470
Msa0121630 MtrunA17_Chr2g0277831 38.321 274 163 2 162 433 523 792 5.90e-49 186
Msa0121630 MtrunA17_Chr7g0255721 43.148 540 272 9 168 678 384 917 5.20e-142 442
Msa0121630 MtrunA17_Chr7g0255721 41.667 276 144 2 163 436 676 936 1.88e-60 221
Msa0121630 MtrunA17_Chr7g0255721 33.916 286 177 5 401 680 338 617 7.43e-37 149
Msa0121630 MtrunA17_Chr7g0255691 43.444 511 271 6 175 678 20 519 3.61e-135 412
Msa0121630 MtrunA17_Chr7g0255691 38.828 273 149 2 171 440 285 542 7.44e-52 190
Msa0121630 MtrunA17_Chr7g0255641 45.745 470 242 6 211 678 432 890 1.45e-134 423
Msa0121630 MtrunA17_Chr7g0255641 41.007 278 147 2 158 433 644 906 9.58e-60 219
Msa0121630 MtrunA17_Chr3g0086401 38.907 604 302 12 175 735 96 675 3.37e-127 395
Msa0121630 MtrunA17_Chr7g0255651 39.773 528 294 7 157 677 4 514 5.76e-122 379
Msa0121630 MtrunA17_Chr3g0086411 42.637 455 217 8 261 674 8 459 9.90e-109 341
Msa0121630 MtrunA17_Chr3g0086411 35.052 291 163 3 161 433 204 486 2.22e-45 170
Msa0121630 MtrunA17_Chr3g0086411 33.654 208 109 6 533 720 7 205 1.24e-20 96.3
Msa0121630 MtrunA17_Chr7g0255901 35.614 570 297 20 211 728 362 913 4.53e-86 292
Msa0121630 MtrunA17_Chr7g0255901 41.544 272 150 7 168 433 635 903 8.28e-49 186
Msa0121630 MtrunA17_Chr4g0043381 32.584 623 353 19 158 745 530 1120 7.22e-78 273
Msa0121630 MtrunA17_Chr6g0459841 58.095 210 53 3 2 177 3 211 1.75e-67 238
Msa0121630 MtrunA17_Chr4g0033451 37.438 406 230 10 168 551 375 778 2.63e-65 236
Msa0121630 MtrunA17_Chr4g0033451 37.395 238 134 5 444 672 379 610 1.21e-39 158
Msa0121630 MtrunA17_Chr3g0145011 46.522 230 119 2 444 671 138 365 4.77e-62 214
Msa0121630 MtrunA17_Chr3g0145011 44.304 237 129 2 172 405 139 375 6.69e-59 205
Msa0121630 MtrunA17_Chr4g0050561 35.905 337 202 7 346 672 52 384 2.17e-61 213
Msa0121630 MtrunA17_Chr4g0050561 44.915 236 126 2 174 405 158 393 2.69e-61 213
Msa0121630 MtrunA17_Chr3g0141901 45.652 230 121 2 444 671 135 362 2.21e-61 212
Msa0121630 MtrunA17_Chr3g0141901 43.882 237 130 2 172 405 136 372 2.98e-58 204
Msa0121630 MtrunA17_Chr8g0345461 43.154 241 137 0 431 671 151 391 6.01e-61 212
Msa0121630 MtrunA17_Chr8g0345461 39.689 257 149 4 171 424 164 417 5.00e-58 204
Msa0121630 MtrunA17_Chr7g0262801 47.577 227 116 2 174 397 189 415 3.08e-60 210
Msa0121630 MtrunA17_Chr7g0262801 41.453 234 137 0 439 672 181 414 4.25e-54 193
Msa0121630 MtrunA17_Chr1g0182711 47.137 227 117 2 174 397 190 416 3.90e-60 210
Msa0121630 MtrunA17_Chr1g0182711 41.453 234 137 0 439 672 182 415 1.98e-54 194
Msa0121630 MtrunA17_Chr7g0217421 43.154 241 134 2 443 681 35 274 2.98e-59 206
Msa0121630 MtrunA17_Chr7g0217421 44.033 243 130 4 172 409 39 280 2.35e-56 198
Msa0121630 MtrunA17_Chr1g0200081 43.154 241 136 1 431 671 161 400 1.02e-58 206
Msa0121630 MtrunA17_Chr1g0200081 39.300 257 149 5 171 424 174 426 1.28e-55 197
Msa0121630 MtrunA17_Chr1g0192151 41.702 235 137 0 439 673 161 395 1.51e-58 205
Msa0121630 MtrunA17_Chr1g0192151 41.702 235 134 2 174 405 169 403 2.98e-57 201
Msa0121630 MtrunA17_Chr4g0014731 41.702 235 137 0 439 673 162 396 1.95e-58 205
Msa0121630 MtrunA17_Chr4g0014731 41.702 235 134 2 174 405 170 404 3.69e-57 201
Msa0121630 MtrunA17_Chr4g0004121 38.816 304 163 7 436 730 233 522 5.95e-55 198
Msa0121630 MtrunA17_Chr4g0004121 42.373 236 124 4 172 398 242 474 9.79e-47 175
Msa0121630 MtrunA17_Chr4g0052411 46.696 227 117 3 172 395 229 454 5.53e-54 199
Msa0121630 MtrunA17_Chr4g0052411 41.991 231 131 2 443 671 225 454 8.60e-53 195
Msa0121630 MtrunA17_Chr3g0143721 40.329 243 141 3 441 681 243 483 1.24e-53 198
Msa0121630 MtrunA17_Chr3g0143721 43.802 242 131 4 172 410 249 488 4.98e-53 196
Msa0121630 MtrunA17_Chr2g0316851 44.105 229 122 2 173 395 595 823 1.90e-53 201
Msa0121630 MtrunA17_Chr2g0316851 36.596 235 138 4 447 674 596 826 9.19e-43 168
Msa0121630 MtrunA17_Chr3g0108321 42.308 234 125 3 407 632 115 346 1.79e-52 187
Msa0121630 MtrunA17_Chr3g0108321 49.153 177 87 1 171 344 158 334 5.05e-48 174
Msa0121630 MtrunA17_Chr2g0297281 45.815 227 119 3 172 395 286 511 1.81e-52 195
Msa0121630 MtrunA17_Chr2g0297281 41.991 231 131 2 443 671 282 511 5.50e-52 194
Msa0121630 MtrunA17_Chr6g0460061 60.625 160 29 2 51 177 1 159 8.41e-52 192
Msa0121630 MtrunA17_Chr6g0456351 43.220 236 131 2 172 405 317 551 1.81e-51 190
Msa0121630 MtrunA17_Chr6g0456351 38.211 246 138 4 447 682 319 560 4.21e-46 174
Msa0121630 MtrunA17_Chr3g0104211 43.802 242 129 4 167 402 299 539 6.03e-51 191
Msa0121630 MtrunA17_Chr3g0104211 33.607 366 214 9 354 707 228 576 1.88e-48 184
Msa0121630 MtrunA17_Chr4g0052271 39.241 237 139 4 436 671 110 342 6.74e-51 183
Msa0121630 MtrunA17_Chr4g0052271 34.457 267 168 5 172 434 119 382 1.48e-39 151
Msa0121630 MtrunA17_Chr2g0331161 39.544 263 148 3 153 405 389 650 1.43e-50 191
Msa0121630 MtrunA17_Chr2g0331161 40.870 230 135 1 444 673 414 642 3.52e-50 190
Msa0121630 MtrunA17_Chr5g0429571 43.028 251 130 5 170 408 311 560 4.97e-50 188
Msa0121630 MtrunA17_Chr5g0429571 37.091 275 161 5 444 707 312 585 5.48e-49 185
Msa0121630 MtrunA17_Chr8g0388371 40.476 252 134 5 172 409 404 653 5.44e-50 189
Msa0121630 MtrunA17_Chr8g0388371 40.598 234 130 3 447 672 406 638 4.65e-46 177
Msa0121630 MtrunA17_Chr7g0248361 42.982 228 126 3 447 671 194 420 2.36e-49 184
Msa0121630 MtrunA17_Chr7g0248361 40.773 233 129 4 170 395 190 420 1.06e-45 174
Msa0121630 MtrunA17_Chr1g0158881 40.486 247 141 3 431 676 314 555 2.42e-49 186
Msa0121630 MtrunA17_Chr1g0158881 42.601 223 126 2 174 396 331 551 1.78e-44 172
Msa0121630 MtrunA17_Chr2g0321241 42.478 226 122 6 439 662 126 345 2.24e-48 177
Msa0121630 MtrunA17_Chr2g0321241 37.607 234 138 6 172 401 132 361 1.50e-41 157
Msa0121630 MtrunA17_Chr7g0260601 42.000 250 135 5 154 395 221 468 2.61e-48 182
Msa0121630 MtrunA17_Chr7g0260601 42.105 228 128 3 447 671 242 468 4.82e-48 181
Msa0121630 MtrunA17_Chr4g0026631 42.035 226 123 6 439 662 121 340 2.67e-48 177
Msa0121630 MtrunA17_Chr4g0026631 38.034 234 137 6 172 401 127 356 7.64e-43 161
Msa0121630 MtrunA17_Chr6g0476861 41.667 228 129 3 447 671 199 425 4.00e-48 181
Msa0121630 MtrunA17_Chr6g0476861 41.564 243 135 4 159 395 184 425 1.04e-46 177
Msa0121630 MtrunA17_Chr5g0432631 42.672 232 132 1 174 405 231 461 5.15e-48 183
Msa0121630 MtrunA17_Chr5g0432631 37.959 245 144 3 444 684 228 468 2.25e-42 166
Msa0121630 MtrunA17_Chr4g0031821 42.795 229 125 4 447 671 322 548 1.43e-47 181
Msa0121630 MtrunA17_Chr4g0031821 42.149 242 131 4 161 395 309 548 3.65e-47 180
Msa0121630 MtrunA17_Chr5g0397121 34.733 262 165 4 445 704 513 770 1.46e-47 181
Msa0121630 MtrunA17_Chr5g0397121 41.667 228 128 3 172 396 513 738 4.94e-47 180
Msa0121630 MtrunA17_Chr8g0362771 42.553 235 133 2 172 405 237 470 1.94e-47 180
Msa0121630 MtrunA17_Chr8g0362771 38.525 244 145 3 423 666 217 455 4.76e-47 179
Msa0121630 MtrunA17_Chr8g0387641 39.916 238 138 3 171 405 520 755 3.59e-47 180
Msa0121630 MtrunA17_Chr8g0387641 34.201 269 163 6 444 702 520 784 5.35e-46 177
Msa0121630 MtrunA17_Chr3g0135721 42.241 232 133 1 174 405 226 456 4.30e-47 179
Msa0121630 MtrunA17_Chr3g0135721 39.035 228 125 3 444 666 223 441 8.57e-45 172
Msa0121630 MtrunA17_Chr1g0195741 37.037 297 169 8 446 736 939 1223 7.52e-47 181
Msa0121630 MtrunA17_Chr1g0195741 43.777 233 123 5 172 399 938 1167 9.89e-45 174
Msa0121630 MtrunA17_Chr1g0195731 37.417 302 172 8 446 741 935 1225 9.80e-47 180
Msa0121630 MtrunA17_Chr1g0195731 43.103 232 126 4 172 399 934 1163 1.67e-45 176
Msa0121630 MtrunA17_Chr3g0094871 39.407 236 137 3 447 677 13 247 1.09e-46 172
Msa0121630 MtrunA17_Chr3g0094871 34.177 316 164 7 172 481 11 288 4.94e-42 159
Msa0121630 MtrunA17_Chr3g0135761 42.174 230 132 1 176 405 226 454 6.99e-46 175
Msa0121630 MtrunA17_Chr3g0135761 38.158 228 127 3 444 666 221 439 2.93e-43 167
Msa0121630 MtrunA17_Chr4g0038101 39.916 238 136 4 447 681 723 956 9.67e-46 177
Msa0121630 MtrunA17_Chr4g0038101 39.655 232 134 4 172 399 721 950 3.25e-43 169
Msa0121630 MtrunA17_Chr1g0202371 42.174 230 127 4 172 398 397 623 2.08e-45 174
Msa0121630 MtrunA17_Chr1g0202371 37.607 234 137 5 446 676 398 625 1.69e-42 165
Msa0121630 MtrunA17_Chr6g0462581 42.105 228 126 4 172 396 500 724 3.73e-45 174
Msa0121630 MtrunA17_Chr6g0462581 33.770 305 189 6 445 741 500 799 6.69e-45 173
Msa0121630 MtrunA17_Chr7g0246111 42.489 233 128 4 167 396 207 436 4.11e-45 169
Msa0121630 MtrunA17_Chr7g0246111 37.768 233 136 5 443 672 210 436 1.73e-42 162
Msa0121630 MtrunA17_Chr3g0127401 40.000 235 131 5 167 396 77 306 5.32e-45 166
Msa0121630 MtrunA17_Chr3g0127401 37.447 235 133 5 444 672 80 306 6.53e-43 160
Msa0121630 MtrunA17_Chr3g0127431 33.451 284 177 6 447 725 86 362 1.40e-44 166
Msa0121630 MtrunA17_Chr3g0127431 37.917 240 139 5 165 399 78 312 3.71e-44 164
Msa0121630 MtrunA17_Chr4g0047411 29.913 458 286 14 163 601 169 610 3.03e-44 170
Msa0121630 MtrunA17_Chr4g0047411 39.738 229 119 5 471 681 202 429 2.03e-40 159
Msa0121630 MtrunA17_Chr6g0459541 32.432 333 176 9 437 742 34 344 6.26e-44 162
Msa0121630 MtrunA17_Chr6g0459541 33.333 297 151 10 172 433 42 326 3.47e-35 137
Msa0121630 MtrunA17_Chr1g0204031 41.558 231 126 6 171 396 556 782 7.90e-44 171
Msa0121630 MtrunA17_Chr1g0204031 38.261 230 134 5 446 672 558 782 7.86e-42 164
Msa0121630 MtrunA17_Chr1g0202381 38.298 235 137 5 445 676 468 697 1.09e-43 169
Msa0121630 MtrunA17_Chr1g0202381 40.870 230 129 5 171 396 467 693 6.96e-43 167
Msa0121630 MtrunA17_Chr5g0432641 41.810 232 131 2 176 404 195 425 2.59e-43 167
Msa0121630 MtrunA17_Chr5g0432641 37.004 227 139 2 449 675 195 417 2.14e-40 158
Msa0121630 MtrunA17_Chr3g0116131 43.304 224 119 5 172 390 902 1122 2.73e-43 169
Msa0121630 MtrunA17_Chr3g0116131 40.807 223 125 4 446 665 903 1121 3.89e-43 169
Msa0121630 MtrunA17_Chr3g0129971 39.759 249 137 6 172 410 296 541 5.09e-43 168
Msa0121630 MtrunA17_Chr3g0129971 39.615 260 148 6 422 675 275 531 2.67e-41 162
Msa0121630 MtrunA17_Chr6g0459561 34.653 303 172 7 443 742 380 659 1.14e-42 165
Msa0121630 MtrunA17_Chr6g0459561 36.934 287 155 11 159 433 369 641 2.99e-38 152
Msa0121630 MtrunA17_Chr6g0459551 31.915 329 168 10 443 739 100 404 2.11e-35 139
Msa0121630 MtrunA17_Chr6g0459551 31.438 299 157 9 159 416 89 380 5.92e-33 132
Msa0121630 MtrunA17_Chr3g0135781 38.919 185 107 3 423 607 35 213 1.45e-33 128
Msa0121630 MtrunA17_Chr3g0135781 44.025 159 88 1 172 330 55 212 1.41e-32 125
Msa0121630 MtrunA17_Chr8g0357301 36.017 236 136 5 195 418 492 724 1.16e-32 136
Msa0121630 MtrunA17_Chr8g0357301 33.913 230 134 4 451 671 479 699 1.70e-28 122
Msa0121630 MtrunA17_Chr2g0289231 35.808 229 131 5 171 389 296 518 6.58e-32 131
Msa0121630 MtrunA17_Chr2g0289231 30.000 290 169 8 406 680 267 537 1.66e-28 121
Msa0121630 MtrunA17_Chr6g0459531 29.773 309 164 9 437 742 59 317 4.40e-30 121
Msa0121630 MtrunA17_Chr6g0459531 29.630 270 148 8 159 416 54 293 1.96e-25 107
Msa0121630 MtrunA17_Chr1g0190401 33.023 215 139 3 440 650 672 885 2.19e-28 122
Msa0121630 MtrunA17_Chr1g0190401 29.524 315 190 9 186 491 691 982 2.25e-24 110
Msa0121630 MtrunA17_Chr1g0168321 42.236 161 88 3 515 671 196 355 6.78e-28 118
Msa0121630 MtrunA17_Chr1g0168321 33.047 233 110 5 170 395 162 355 7.09e-27 115
Msa0121630 MtrunA17_Chr2g0315971 24.030 541 331 20 102 616 154 640 5.78e-26 114
Msa0121630 MtrunA17_Chr5g0432391 38.854 157 96 0 249 405 80 236 2.48e-25 109
Msa0121630 MtrunA17_Chr5g0432391 30.653 199 128 3 513 707 74 266 2.92e-24 106
Msa0121630 MtrunA17_Chr4g0062081 52.564 78 36 1 176 252 11 88 1.49e-21 90.1
Msa0121630 MtrunA17_Chr4g0062081 46.154 78 41 1 449 525 11 88 7.23e-18 79.7
Msa0121630 MtrunA17_Chr2g0327221 87.234 47 6 0 691 737 1 47 4.53e-20 84.0
Msa0121630 MtrunA17_Chr5g0404291 29.858 211 115 8 476 661 382 584 5.28e-16 82.4
Msa0121630 MtrunA17_Chr5g0404291 29.268 205 111 7 208 385 387 584 6.61e-13 72.4
Msa0121630 MtrunA17_Chr3g0116941 29.268 205 125 6 447 634 160 361 4.05e-15 79.0
Msa0121630 MtrunA17_Chr6g0450161 28.774 212 119 8 476 662 357 561 4.31e-15 79.3
Msa0121630 MtrunA17_Chr6g0450161 30.872 149 98 4 208 355 362 506 2.85e-13 73.6
Msa0121630 MtrunA17_Chr4g0039781 31.288 163 104 5 473 634 360 515 4.06e-14 76.3
Msa0121630 MtrunA17_Chr4g0039781 29.480 173 103 7 197 355 345 512 4.78e-12 69.7
Msa0121630 MtrunA17_Chr3g0086421 42.529 87 45 2 174 257 236 320 2.30e-13 72.4
Msa0121630 MtrunA17_Chr8g0372701 29.940 167 104 5 455 616 232 390 4.85e-12 69.3
Msa0121630 MtrunA17_Chr2g0315921 28.916 249 137 13 102 341 159 376 1.19e-11 67.8
Msa0121630 MtrunA17_Chr2g0315911 28.571 168 107 5 454 616 213 372 2.50e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0121630 AT5G03340.1 89.533 793 49 2 1 760 1 792 0.0 1451
Msa0121630 AT3G53230.1 88.146 793 59 2 1 760 1 791 0.0 1409
Msa0121630 AT3G09840.1 89.029 793 51 4 1 759 1 791 0.0 1409
Msa0121630 AT3G01610.1 42.159 593 305 7 174 743 232 809 2.12e-147 453
Msa0121630 AT3G01610.1 36.054 294 160 4 446 720 231 515 3.94e-48 183
Msa0121630 AT3G01610.1 38.290 269 160 4 171 437 524 788 4.94e-42 165
Msa0121630 AT3G01610.2 42.159 593 305 7 174 743 232 809 2.73e-147 453
Msa0121630 AT3G01610.2 36.054 294 160 4 446 720 231 515 4.63e-48 183
Msa0121630 AT3G01610.2 38.290 269 160 4 171 437 524 788 5.27e-42 165
Msa0121630 AT2G03670.1 42.604 507 267 5 176 674 23 513 3.07e-136 417
Msa0121630 AT2G03670.1 40.210 286 152 2 158 439 269 539 3.28e-54 198
Msa0121630 AT2G03670.2 43.095 420 215 5 176 587 23 426 1.69e-108 338
Msa0121630 AT2G03670.2 36.000 225 131 4 449 665 23 242 1.76e-35 140
Msa0121630 AT2G03670.2 40.260 154 88 1 158 307 269 422 6.09e-25 108
Msa0121630 AT1G03000.1 33.913 575 314 17 211 735 379 937 8.98e-88 298
Msa0121630 AT1G03000.1 42.066 271 151 5 168 433 651 920 8.78e-53 198
Msa0121630 AT3G56690.1 47.328 262 137 1 414 675 690 950 4.80e-78 272
Msa0121630 AT3G56690.1 45.902 244 130 1 171 412 720 963 1.42e-60 222
Msa0121630 AT3G56690.1 45.536 224 120 2 177 399 387 609 3.68e-58 215
Msa0121630 AT3G56690.1 40.887 203 112 3 477 676 413 610 3.99e-39 157
Msa0121630 AT5G08470.3 34.630 514 287 12 201 689 576 1065 1.19e-73 261
Msa0121630 AT5G08470.3 42.544 228 131 0 172 399 832 1059 1.38e-49 189
Msa0121630 AT5G08470.1 34.630 514 287 12 201 689 585 1074 1.74e-73 260
Msa0121630 AT5G08470.1 42.544 228 131 0 172 399 841 1068 1.60e-49 189
Msa0121630 AT1G05910.1 44.643 280 144 5 170 441 376 652 1.71e-64 234
Msa0121630 AT1G05910.1 33.808 281 155 7 444 712 377 638 4.47e-39 157
Msa0121630 AT1G45000.1 46.522 230 119 2 444 671 135 362 2.37e-62 215
Msa0121630 AT1G45000.1 44.304 237 129 2 172 405 136 372 4.20e-58 204
Msa0121630 AT5G19990.2 36.446 332 198 7 349 672 2 328 2.61e-62 214
Msa0121630 AT5G19990.2 44.915 236 126 2 174 405 102 337 4.43e-62 213
Msa0121630 AT5G20000.1 36.499 337 200 7 346 672 54 386 5.87e-62 215
Msa0121630 AT5G20000.1 44.915 236 126 2 174 405 160 395 1.20e-61 214
Msa0121630 AT2G20140.1 48.018 227 115 1 174 397 187 413 6.90e-62 215
Msa0121630 AT2G20140.1 42.308 234 135 0 439 672 179 412 1.52e-55 198
Msa0121630 AT5G19990.1 35.988 339 203 7 344 672 52 386 7.04e-62 214
Msa0121630 AT5G19990.1 44.915 236 126 2 174 405 160 395 9.94e-62 214
Msa0121630 AT5G19990.3 35.988 339 203 7 344 672 52 386 7.04e-62 214
Msa0121630 AT5G19990.3 44.915 236 126 2 174 405 160 395 9.94e-62 214
Msa0121630 AT5G43010.1 46.087 230 120 2 444 671 135 362 9.13e-62 214
Msa0121630 AT5G43010.1 43.882 237 130 2 172 405 136 372 8.17e-58 202
Msa0121630 AT4G29040.1 47.577 227 116 2 174 397 187 413 8.47e-61 212
Msa0121630 AT4G29040.1 41.880 234 136 0 439 672 179 412 5.97e-55 196
Msa0121630 AT1G53750.1 43.154 241 137 0 431 671 151 391 1.19e-60 211
Msa0121630 AT1G53750.1 39.689 257 149 4 171 424 164 417 9.06e-58 203
Msa0121630 AT5G58290.1 39.792 289 160 4 407 683 108 394 5.48e-60 209
Msa0121630 AT5G58290.1 44.444 234 127 1 171 401 151 384 2.86e-58 204
Msa0121630 AT3G05530.1 42.553 235 135 0 439 673 162 396 2.65e-59 207
Msa0121630 AT3G05530.1 42.553 235 132 2 174 405 170 404 8.12e-58 203
Msa0121630 AT1G09100.1 42.128 235 136 0 439 673 161 395 2.73e-58 205
Msa0121630 AT1G09100.1 41.702 235 134 2 174 405 169 403 3.08e-56 199
Msa0121630 AT1G53780.1 43.333 240 136 0 431 670 323 562 8.66e-58 208
Msa0121630 AT1G53780.1 43.111 225 123 2 174 394 339 562 1.54e-54 199
Msa0121630 AT1G53780.4 43.333 240 136 0 431 670 323 562 8.66e-58 208
Msa0121630 AT1G53780.4 43.111 225 123 2 174 394 339 562 1.54e-54 199
Msa0121630 AT1G53780.3 43.333 240 136 0 431 670 322 561 8.94e-58 208
Msa0121630 AT1G53780.3 43.111 225 123 2 174 394 338 561 1.56e-54 199
Msa0121630 AT1G53780.2 43.333 240 136 0 431 670 344 583 1.32e-57 208
Msa0121630 AT1G53780.2 43.111 225 123 2 174 394 360 583 2.28e-54 199
Msa0121630 AT1G80350.1 38.944 303 164 6 436 730 227 516 1.30e-56 203
Msa0121630 AT1G80350.1 40.486 247 135 4 161 398 225 468 1.08e-45 172
Msa0121630 AT5G15250.1 41.949 236 134 2 443 676 217 451 2.31e-55 203
Msa0121630 AT5G15250.1 44.444 243 129 4 172 409 221 462 2.82e-53 197
Msa0121630 AT3G15120.2 40.942 276 151 3 173 436 727 1002 2.23e-54 205
Msa0121630 AT3G15120.2 38.362 232 130 5 447 670 728 954 4.92e-42 167
Msa0121630 AT3G15120.1 40.942 276 151 3 173 436 717 992 2.48e-54 204
Msa0121630 AT3G15120.1 38.362 232 130 5 447 670 718 944 5.41e-42 166
Msa0121630 AT5G42270.1 41.152 243 139 3 441 681 241 481 2.94e-54 200
Msa0121630 AT5G42270.1 42.975 242 133 4 172 410 247 486 1.04e-52 196
Msa0121630 AT2G30950.4 44.856 243 128 4 172 409 228 469 1.37e-53 198
Msa0121630 AT2G30950.4 41.991 231 131 2 443 671 224 453 1.70e-52 195
Msa0121630 AT2G30950.1 44.856 243 128 4 172 409 224 465 1.48e-53 198
Msa0121630 AT2G30950.1 41.991 231 131 2 443 671 220 449 1.75e-52 195
Msa0121630 AT2G30950.2 44.856 243 128 4 172 409 224 465 1.48e-53 198
Msa0121630 AT2G30950.2 41.991 231 131 2 443 671 220 449 1.75e-52 195
Msa0121630 AT2G30950.3 44.856 243 128 4 172 409 224 465 1.48e-53 198
Msa0121630 AT2G30950.3 41.991 231 131 2 443 671 220 449 1.75e-52 195
Msa0121630 AT1G50250.1 40.329 243 141 3 441 681 253 493 3.65e-53 197
Msa0121630 AT1G50250.1 42.975 242 133 4 172 410 259 498 2.55e-52 194
Msa0121630 AT1G06430.1 44.033 243 130 4 172 409 217 458 7.11e-53 196
Msa0121630 AT1G06430.1 41.558 231 132 2 443 671 213 442 1.21e-51 192
Msa0121630 AT1G06430.3 44.033 243 130 4 172 409 217 458 7.11e-53 196
Msa0121630 AT1G06430.3 41.558 231 132 2 443 671 213 442 1.21e-51 192
Msa0121630 AT1G06430.2 44.033 243 130 4 172 409 217 458 7.11e-53 196
Msa0121630 AT1G06430.2 41.558 231 132 2 443 671 213 442 1.21e-51 192
Msa0121630 AT2G34560.1 38.333 240 144 3 436 674 91 327 4.01e-52 186
Msa0121630 AT2G34560.1 34.328 268 168 5 172 434 100 364 1.14e-41 157
Msa0121630 AT5G15250.2 39.382 259 131 4 443 676 217 474 5.24e-52 190
Msa0121630 AT5G15250.2 40.602 266 129 5 172 409 221 485 6.52e-50 184
Msa0121630 AT2G34560.2 38.272 243 146 3 433 674 97 336 5.41e-52 186
Msa0121630 AT2G34560.2 34.328 268 168 5 172 434 109 373 1.10e-41 157
Msa0121630 AT3G47060.1 44.048 252 126 5 170 408 320 569 6.45e-52 194
Msa0121630 AT3G47060.1 37.091 275 161 5 444 707 321 594 2.45e-50 190
Msa0121630 AT5G08470.2 33.413 419 238 11 201 594 585 987 4.57e-51 194
Msa0121630 AT5G08470.2 42.484 153 86 1 172 322 841 993 3.73e-29 125
Msa0121630 AT5G58870.1 44.167 240 125 4 170 402 324 561 7.77e-51 191
Msa0121630 AT5G58870.1 38.197 233 140 3 444 673 325 556 1.11e-47 182
Msa0121630 AT3G02450.1 43.220 236 131 2 172 405 331 565 1.89e-50 187
Msa0121630 AT3G02450.1 36.397 272 157 5 429 690 317 582 5.32e-45 172
Msa0121630 AT4G23940.1 41.129 248 131 4 172 405 427 673 4.40e-50 190
Msa0121630 AT4G23940.1 40.343 233 130 3 449 673 431 662 1.92e-45 176
Msa0121630 AT3G16290.1 40.611 229 135 1 444 672 406 633 5.22e-50 189
Msa0121630 AT3G16290.1 40.161 249 138 3 158 396 386 633 2.13e-48 185
Msa0121630 AT5G53170.1 41.126 231 131 2 446 676 360 585 9.46e-50 188
Msa0121630 AT5G53170.1 43.498 223 124 2 174 396 361 581 5.29e-46 177
Msa0121630 AT1G07510.1 43.478 230 124 4 447 672 326 553 1.43e-48 185
Msa0121630 AT1G07510.1 40.078 257 145 5 161 409 313 568 3.15e-47 181
Msa0121630 AT2G45500.4 39.485 233 132 5 443 672 78 304 4.29e-48 174
Msa0121630 AT2G45500.4 40.773 233 132 4 167 396 75 304 4.54e-46 169
Msa0121630 AT2G45500.3 39.485 233 132 5 443 672 78 304 4.29e-48 174
Msa0121630 AT2G45500.3 40.773 233 132 4 167 396 75 304 4.54e-46 169
Msa0121630 AT4G28000.1 40.511 274 150 7 139 406 483 749 1.41e-47 182
Msa0121630 AT4G28000.1 35.439 285 169 7 446 720 516 795 1.15e-44 173
Msa0121630 AT4G28000.3 40.909 264 144 6 148 406 495 751 1.49e-47 182
Msa0121630 AT4G28000.3 35.563 284 168 7 446 719 518 796 1.04e-44 173
Msa0121630 AT4G28000.2 40.909 264 144 6 148 406 495 751 1.51e-47 182
Msa0121630 AT4G28000.2 35.439 285 169 7 446 720 518 797 1.09e-44 173
Msa0121630 AT4G02480.1 41.739 230 127 4 446 672 961 1186 4.68e-47 182
Msa0121630 AT4G02480.1 44.105 229 122 4 172 396 960 1186 1.05e-45 177
Msa0121630 AT2G45500.2 39.485 233 132 5 443 672 211 437 5.85e-47 175
Msa0121630 AT2G45500.2 40.773 233 132 4 167 396 208 437 6.59e-45 169
Msa0121630 AT2G45500.1 39.485 233 132 5 443 672 215 441 7.02e-47 174
Msa0121630 AT2G45500.1 40.773 233 132 4 167 396 212 441 8.27e-45 169
Msa0121630 AT2G45500.5 39.485 233 132 5 443 672 221 447 8.49e-47 174
Msa0121630 AT2G45500.5 40.773 233 132 4 167 396 218 447 7.11e-45 169
Msa0121630 AT1G02890.1 41.250 240 133 5 446 682 942 1176 1.00e-46 181
Msa0121630 AT1G02890.1 33.073 384 235 12 28 399 797 1170 2.52e-46 179
Msa0121630 AT2G29080.1 42.105 228 129 2 447 672 321 547 1.41e-46 179
Msa0121630 AT2G29080.1 41.152 243 135 4 161 397 308 548 3.47e-46 177
Msa0121630 AT2G26140.1 44.545 220 121 1 174 393 226 444 1.48e-46 177
Msa0121630 AT2G26140.1 39.013 223 132 2 444 666 223 441 8.69e-45 172
Msa0121630 AT2G27600.1 40.708 226 126 6 439 662 123 342 1.60e-46 172
Msa0121630 AT2G27600.1 36.325 234 141 6 172 401 129 358 5.25e-40 154
Msa0121630 AT1G50140.2 41.453 234 130 4 447 677 691 920 1.98e-46 179
Msa0121630 AT1G50140.2 41.921 229 127 4 172 396 689 915 1.19e-44 174
Msa0121630 AT1G50140.5 41.453 234 130 4 447 677 691 920 1.98e-46 179
Msa0121630 AT1G50140.5 41.921 229 127 4 172 396 689 915 1.19e-44 174
Msa0121630 AT4G27680.1 39.076 238 135 5 167 399 77 309 2.01e-46 171
Msa0121630 AT4G27680.1 37.500 248 143 6 450 693 86 325 2.68e-44 165
Msa0121630 AT1G50140.3 41.453 234 130 4 447 677 713 942 2.33e-46 179
Msa0121630 AT1G50140.3 41.921 229 127 4 172 396 711 937 1.63e-44 173
Msa0121630 AT1G50140.1 41.453 234 130 4 447 677 713 942 2.33e-46 179
Msa0121630 AT1G50140.1 41.921 229 127 4 172 396 711 937 1.63e-44 173
Msa0121630 AT1G50140.4 41.453 234 130 4 447 677 713 942 2.33e-46 179
Msa0121630 AT1G50140.4 41.921 229 127 4 172 396 711 937 1.63e-44 173
Msa0121630 AT1G64110.1 41.228 228 129 3 172 396 513 738 4.18e-46 177
Msa0121630 AT1G64110.1 34.082 267 166 5 444 704 512 774 6.09e-46 177
Msa0121630 AT1G64110.5 41.228 228 129 3 172 396 516 741 4.29e-46 177
Msa0121630 AT1G64110.5 34.082 267 166 5 444 704 515 777 6.55e-46 177
Msa0121630 AT1G64110.3 41.228 228 129 3 172 396 516 741 4.29e-46 177
Msa0121630 AT1G64110.3 34.082 267 166 5 444 704 515 777 6.55e-46 177
Msa0121630 AT1G64110.2 41.921 229 126 4 172 396 518 743 4.51e-46 177
Msa0121630 AT1G64110.2 34.082 267 166 5 444 704 517 779 6.63e-46 177
Msa0121630 AT1G64110.4 41.921 229 126 4 172 396 518 743 4.51e-46 177
Msa0121630 AT1G64110.4 34.082 267 166 5 444 704 517 779 6.63e-46 177
Msa0121630 AT5G53540.1 37.500 248 143 6 450 693 89 328 2.43e-45 168
Msa0121630 AT5G53540.1 32.298 322 190 7 171 471 83 397 4.24e-44 164
Msa0121630 AT4G04910.1 30.508 413 249 12 163 553 206 602 2.54e-45 174
Msa0121630 AT4G04910.1 39.091 220 120 4 471 677 239 457 2.02e-39 156
Msa0121630 AT5G52882.1 40.336 238 136 4 172 406 514 748 3.44e-45 175
Msa0121630 AT5G52882.1 37.551 245 142 6 445 683 514 753 1.25e-43 170
Msa0121630 AT4G24860.3 41.631 233 130 4 171 399 814 1044 5.80e-44 172
Msa0121630 AT4G24860.3 38.843 242 140 5 444 682 814 1050 2.33e-43 170
Msa0121630 AT4G24860.1 41.631 233 130 4 171 399 816 1046 6.08e-44 172
Msa0121630 AT4G24860.1 38.843 242 140 5 444 682 816 1052 2.25e-43 170
Msa0121630 AT4G24860.4 41.631 233 130 4 171 399 789 1019 6.21e-44 172
Msa0121630 AT4G24860.4 38.843 242 140 5 444 682 789 1025 1.94e-43 170
Msa0121630 AT4G24860.2 41.631 233 130 4 171 399 812 1042 6.39e-44 172
Msa0121630 AT4G24860.2 38.843 242 140 5 444 682 812 1048 2.16e-43 170
Msa0121630 AT3G19740.1 39.744 234 134 4 447 677 703 932 7.12e-44 171
Msa0121630 AT3G19740.1 41.048 229 129 4 172 396 701 927 1.66e-43 170
Msa0121630 AT3G27120.1 34.364 291 171 6 443 730 398 671 1.15e-43 169
Msa0121630 AT3G27120.1 36.299 281 165 8 159 433 387 659 6.41e-38 151
Msa0121630 AT5G64580.1 36.486 296 162 8 172 449 313 600 3.54e-43 169
Msa0121630 AT5G64580.1 37.687 268 155 5 441 697 309 575 2.70e-41 163
Msa0121630 AT1G62130.2 36.170 235 131 5 446 677 744 962 2.30e-36 148
Msa0121630 AT1G62130.2 35.918 245 136 7 172 412 743 970 7.04e-34 140
Msa0121630 AT1G62130.1 36.170 235 131 5 446 677 751 969 2.86e-36 148
Msa0121630 AT1G62130.1 35.918 245 136 7 172 412 750 977 7.54e-34 140
Msa0121630 AT1G02890.2 29.688 384 220 13 28 399 797 1142 1.04e-33 140
Msa0121630 AT1G02890.2 35.417 240 119 6 446 682 942 1148 1.47e-32 136
Msa0121630 AT1G45000.2 43.165 139 79 0 444 582 135 273 2.85e-33 131
Msa0121630 AT1G45000.2 45.652 138 72 2 172 306 136 273 1.92e-31 126
Msa0121630 AT1G79560.3 35.470 234 136 5 197 418 514 744 5.33e-33 137
Msa0121630 AT1G79560.3 30.745 322 191 8 364 672 418 720 7.00e-29 124
Msa0121630 AT1G79560.2 35.470 234 136 5 197 418 514 744 6.04e-33 137
Msa0121630 AT1G79560.2 30.745 322 191 8 364 672 418 720 6.62e-29 124
Msa0121630 AT1G79560.1 35.470 234 136 5 197 418 514 744 6.50e-33 137
Msa0121630 AT1G79560.1 30.745 322 191 8 364 672 418 720 7.74e-29 124
Msa0121630 AT4G04180.2 34.335 233 139 5 166 389 305 532 1.83e-31 130
Msa0121630 AT4G04180.2 33.913 230 133 7 446 665 312 532 6.50e-30 126
Msa0121630 AT4G04180.1 34.335 233 139 5 166 389 310 537 1.86e-31 130
Msa0121630 AT4G04180.1 33.913 230 133 7 446 665 317 537 6.67e-30 126
Msa0121630 AT3G04340.1 34.197 193 125 2 440 631 776 967 1.55e-27 120
Msa0121630 AT3G04340.1 33.163 196 123 4 186 374 795 989 1.67e-21 101
Msa0121630 AT4G36580.1 27.778 216 120 7 476 662 376 584 2.59e-14 77.4
Msa0121630 AT4G36580.1 32.639 144 90 6 208 349 381 519 7.07e-12 69.3
Msa0121630 AT2G18330.1 28.837 215 114 8 480 662 383 590 2.76e-14 77.4
Msa0121630 AT2G18330.1 30.675 163 108 4 208 369 384 542 8.09e-13 72.4
Msa0121630 AT5G17760.1 27.000 200 125 6 427 616 199 387 1.67e-13 74.3
Msa0121630 AT4G24710.1 30.220 182 103 7 474 634 189 367 4.40e-13 72.8
Msa0121630 AT4G24710.3 30.220 182 103 7 474 634 201 379 4.67e-13 72.8
Msa0121630 AT5G16930.1 31.333 150 96 6 208 355 397 541 1.90e-12 71.2
Msa0121630 AT5G16930.1 29.375 160 105 5 476 634 392 544 5.73e-12 69.7
Msa0121630 AT3G03060.1 30.201 149 99 4 208 355 385 529 4.34e-12 70.1
Msa0121630 AT3G03060.1 28.750 160 106 5 476 634 380 532 8.65e-12 69.3
Msa0121630 AT4G24710.4 32.168 143 75 6 474 595 201 342 3.54e-11 66.2
Msa0121630 AT4G24710.2 32.168 143 75 6 474 595 201 342 3.54e-11 66.2
Msa0121630 AT5G17730.1 27.811 169 108 5 454 616 217 377 4.33e-11 66.6
Msa0121630 AT5G17740.1 27.011 174 108 4 454 616 217 382 4.62e-11 66.6

Find 229 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGGGTTCTCTCAACTCTTT+TGG 0.167865 1_3:-47685087 Msa0121630:three_prime_UTR
CCATTAGTCTTCTCCCTCTT+TGG 0.192457 1_3:+47687380 None:intergenic
CCTGAGAAATTTGAGAAGTT+TGG 0.210931 1_3:-47686541 Msa0121630:CDS
CTCTTGACTGCTGCAAAGTT+TGG 0.216514 1_3:+47685435 None:intergenic
CGATTTCAGTACGGCGATTC+TGG 0.227132 1_3:-47689357 Msa0121630:CDS
ACAATTATTTGGTCAGCTTC+TGG 0.235003 1_3:-47685124 Msa0121630:three_prime_UTR
TGAAGTTTCTCCATGGTTTC+AGG 0.238671 1_3:+47689260 None:intergenic
AAACATTTGAAACAATTATT+TGG 0.249754 1_3:-47685135 Msa0121630:three_prime_UTR
CATTGCCCCGTAAAAGATAT+TGG 0.277832 1_3:-47685183 Msa0121630:three_prime_UTR
GTGAAGGAGAGCCTGTTAAA+AGG 0.279427 1_3:-47687757 Msa0121630:CDS
CAATGTCCTGATGTCAAATA+TGG 0.279869 1_3:-47688949 Msa0121630:CDS
CCAAACTTCTCAAATTTCTC+AGG 0.287062 1_3:+47686541 None:intergenic
AATCAAAAGGTACATAAATT+AGG 0.295583 1_3:+47685247 None:intergenic
ATGCTGGTGGTGCTGCTGAC+AGG 0.307840 1_3:-47686067 Msa0121630:CDS
CATCAATGGTTTCATCTTCT+AGG 0.308644 1_3:+47686933 None:intergenic
GAAGTTTGCTTGACATTCAT+TGG 0.319366 1_3:+47686444 None:intergenic
GATACTATTGAAGGGGTTAC+TGG 0.323515 1_3:-47688898 Msa0121630:CDS
AATAAGCTAATATTAGAAAT+AGG 0.328952 1_3:+47684964 None:intergenic
TCAGTGCATCAGAGAGAAAA+TGG 0.329410 1_3:-47686966 Msa0121630:CDS
TTTGATCGGGAGATTGATAT+TGG 0.332722 1_3:-47687224 Msa0121630:CDS
AGGAAGAAGATGAAGAGAAT+TGG 0.335553 1_3:+47689527 None:intergenic
GAATCAACTGCTTACAGAAA+TGG 0.338525 1_3:-47686039 Msa0121630:CDS
GACCCTGCTCTTCGGAGGTT+TGG 0.338552 1_3:-47687251 Msa0121630:CDS
AAGAAAACTGTGTTTATCAT+TGG 0.338719 1_3:-47686002 Msa0121630:CDS
AGATGAAGAGAATTGGGAAT+TGG 0.339271 1_3:+47689534 None:intergenic
AACATATCTCCCTTCCTAAC+TGG 0.340000 1_3:+47687875 None:intergenic
CCACAATTATTCAAGTCTAT+TGG 0.341498 1_3:-47687632 Msa0121630:CDS
AAAGATATTGGTACATCATT+AGG 0.342060 1_3:-47685171 Msa0121630:three_prime_UTR
GATTACGAATCGGAGGATTC+AGG 0.348248 1_3:+47689490 None:intergenic
ATTGTTGAATTTATTCTTCA+AGG 0.348848 1_3:+47685007 None:intergenic
TTGCAGCAGTCAAGAGGGTT+TGG 0.349332 1_3:-47685428 Msa0121630:CDS
TTGCAGAGAGGTAGTAGTTC+AGG 0.356705 1_3:-47686092 Msa0121630:intron
AGAAAACTGTGTTTATCATT+GGG 0.358046 1_3:-47686001 Msa0121630:CDS
GATGGCTCAGATTCGGGAAT+TGG 0.362974 1_3:-47687675 Msa0121630:CDS
CAATTATTTGGTCAGCTTCT+GGG 0.366317 1_3:-47685123 Msa0121630:three_prime_UTR
TTATCCTCTTCCATAGCTTC+AGG 0.367349 1_3:+47685566 None:intergenic
AAGAGCAGGGTCGATGCTAT+TGG 0.367446 1_3:+47687262 None:intergenic
GATGAAGAGAATTGGGAATT+GGG 0.372200 1_3:+47689535 None:intergenic
TCAGCTTCTGGGACCATATA+TGG 0.372203 1_3:-47685112 Msa0121630:three_prime_UTR
CCATACAACAAAATCCCTTT+TGG 0.374010 1_3:+47687599 None:intergenic
CCGTGCGCATGTAATTGTTA+TGG 0.381381 1_3:-47687300 Msa0121630:CDS
ACATTCATTGGCAATAGCTT+TGG 0.385260 1_3:+47686456 None:intergenic
CGCTTTCCATATTTGACATC+AGG 0.387613 1_3:+47688943 None:intergenic
TTCCCAGCTCTTGACCCTCA+TGG 0.390536 1_3:-47687336 Msa0121630:CDS
AATATCTTCCCAGCTGCAAT+TGG 0.390700 1_3:+47686707 None:intergenic
AAAGCAGATGGCTCAGATTC+GGG 0.391221 1_3:-47687681 Msa0121630:CDS
TCTTGACTGCTGCAAAGTTT+GGG 0.392250 1_3:+47685436 None:intergenic
GGAAGAAGATGAAGAGAATT+GGG 0.399256 1_3:+47689528 None:intergenic
CTCTTCATCTTCTTCCTCCA+TGG 0.406022 1_3:-47689521 Msa0121630:exon
CGTGCGCATGTAATTGTTAT+GGG 0.408023 1_3:-47687299 Msa0121630:CDS
CGAGCTGTTGCAAATGAAAC+TGG 0.410371 1_3:-47687545 Msa0121630:CDS
ATTGTTTCAAATGTTTAGAA+AGG 0.414115 1_3:+47685142 None:intergenic
AGAGAACCCGTGACCATATA+TGG 0.414197 1_3:+47685099 None:intergenic
GAAAGCAGATGGCTCAGATT+CGG 0.416171 1_3:-47687682 Msa0121630:CDS
CGTCCAGGTCGTAGTAGAGC+AGG 0.418938 1_3:+47685951 None:intergenic
CCAGCACTTGCAGTTGCAAA+AGG 0.423662 1_3:+47685342 None:intergenic
GTTTAGTACTTACTGTTTCA+CGG 0.424549 1_3:+47686834 None:intergenic
CAGCTCTTGACCCTCATGGA+TGG 0.429744 1_3:-47687332 Msa0121630:CDS
AATTGCAGCTGGGAAGATAT+TGG 0.431694 1_3:-47686705 Msa0121630:CDS
AGAGCAGGGTCGATGCTATT+GGG 0.432897 1_3:+47687263 None:intergenic
ATGTCAACATCCTTTGCAAT+GGG 0.437399 1_3:+47685849 None:intergenic
CCTGTGGATGATACTATTGA+AGG 0.437543 1_3:-47688907 Msa0121630:CDS
ATAAAGAAAGTGAGAGGGTT+TGG 0.439759 1_3:+47689580 None:intergenic
CTTGCAGTTGCAAAAGGGTC+AGG 0.440057 1_3:+47685348 None:intergenic
GTTCTGTTCTATGGTCCTCC+TGG 0.444694 1_3:-47686499 Msa0121630:CDS
TTCTATGGTCCTCCTGGTTG+TGG 0.449593 1_3:-47686493 Msa0121630:CDS
AGCTCTTGACCCTCATGGAT+GGG 0.452610 1_3:-47687331 Msa0121630:CDS
CTTCTCCCTCTTTGGAGCAA+TGG 0.454941 1_3:+47687388 None:intergenic
CTTCCAAACCTCCGAAGAGC+AGG 0.457920 1_3:+47687248 None:intergenic
GATGAGAAGTGTGGAATTCA+AGG 0.459086 1_3:-47687837 Msa0121630:CDS
ATTAAAGTCTTACCAGATCC+AGG 0.459464 1_3:+47687572 None:intergenic
GAGCTACTCACAATGTGGTT+TGG 0.459720 1_3:-47686403 Msa0121630:CDS
CTGCTCTTCGGAGGTTTGGA+AGG 0.463909 1_3:-47687247 Msa0121630:CDS
CATCCATGAGGGTCAAGAGC+TGG 0.467092 1_3:+47687333 None:intergenic
GTTTGGAATGTCACCTTCAA+AGG 0.467990 1_3:-47686524 Msa0121630:CDS
ACTGAAGCCTTGAGTGTACT+TGG 0.468487 1_3:+47685815 None:intergenic
GTCGGGAATCCTCGTCTGGA+AGG 0.469180 1_3:+47685904 None:intergenic
TCAAGACGTCCAACTTCATC+TGG 0.469206 1_3:+47687197 None:intergenic
AATTTCTCAGGGTGTTCCAC+TGG 0.471754 1_3:+47686553 None:intergenic
GGAGGTTTGGAAGGTTTGAT+CGG 0.472205 1_3:-47687238 Msa0121630:CDS
TGAAGATGACCTCTACAGTT+AGG 0.475290 1_3:-47685310 Msa0121630:CDS
GGCAGGACATTGAGAGAGAA+AGG 0.476041 1_3:-47685604 Msa0121630:intron
AATTGGTGGAACTGCCTTTG+AGG 0.476289 1_3:-47687658 Msa0121630:CDS
CAAACTTCTCAAATTTCTCA+GGG 0.479836 1_3:+47686542 None:intergenic
TCGAGGCATATCGTCCAGTT+AGG 0.479905 1_3:-47687889 Msa0121630:CDS
GAGGTTTGGAAGGTTTGATC+GGG 0.482378 1_3:-47687237 Msa0121630:CDS
CGGGAATCCTCGTCTGGAAG+GGG 0.484878 1_3:+47685906 None:intergenic
TCACAGAAAATCTCAGTGTC+AGG 0.485251 1_3:+47687776 None:intergenic
GCAAAGTTTGGGCAAAGGCT+TGG 0.485421 1_3:+47685447 None:intergenic
GTTAAGTATCTCAGCATCAA+TGG 0.488535 1_3:+47686919 None:intergenic
TGATGTCGGGAATCCTCGTC+TGG 0.489413 1_3:+47685900 None:intergenic
AGCTTTGAATATCTGATGTC+GGG 0.490617 1_3:+47685887 None:intergenic
TTGAAGTGCCCAATTGCAGC+TGG 0.490656 1_3:-47686716 Msa0121630:CDS
GAAAGTGAGAGGGTTTGGTT+AGG 0.491111 1_3:+47689585 None:intergenic
ATAGCATCGACCCTGCTCTT+CGG 0.492285 1_3:-47687259 Msa0121630:CDS
ATCAACTGATCCAGCCGTCC+AGG 0.492998 1_3:+47685936 None:intergenic
CTCATCAATGAAGATGATTG+AGG 0.493640 1_3:+47687418 None:intergenic
CGGTGATACAATTCTGATCA+AGG 0.494228 1_3:-47689228 Msa0121630:intron
TGCTGGTGGTGCTGCTGACA+GGG 0.496100 1_3:-47686066 Msa0121630:CDS
CGCACTTCATCCTGAAACCA+TGG 0.497406 1_3:-47689270 Msa0121630:CDS
GAGGATCGTTTAGATGAGGT+TGG 0.497619 1_3:-47687728 Msa0121630:CDS
GTCAACATCCTTTGCAATGG+GGG 0.502418 1_3:+47685851 None:intergenic
ATTGGTGTGAAGCCACCAAA+AGG 0.504550 1_3:-47687614 Msa0121630:CDS
CTGCTGCAAAGTTTGGGCAA+AGG 0.506510 1_3:+47685442 None:intergenic
ACTTGATTCTATTGCAACTC+AGG 0.507015 1_3:-47686305 Msa0121630:intron
GGTAGTAGTTCAGGAGATGC+TGG 0.507175 1_3:-47686083 Msa0121630:CDS
AACCACATTGTGAGTAGCTC+GGG 0.507234 1_3:+47686406 None:intergenic
GAACATTTCAGTACCGCACT+TGG 0.508014 1_3:-47686878 Msa0121630:CDS
CCAAAGAGGGAGAAGACTAA+TGG 0.512008 1_3:-47687380 Msa0121630:CDS
GCAAACTTCATTAGTATCAA+AGG 0.512270 1_3:-47686430 Msa0121630:CDS
GAGAAACTTCAACTCTTTCG+CGG 0.515636 1_3:-47689248 Msa0121630:CDS
TCGGGAATCCTCGTCTGGAA+GGG 0.516469 1_3:+47685905 None:intergenic
TCATCAATGAAGATGATTGA+GGG 0.516809 1_3:+47687419 None:intergenic
AAGCGATAATCCTGAAGCTA+TGG 0.517073 1_3:-47685576 Msa0121630:CDS
AGAGCAGGGTCTATAATGTC+AGG 0.519523 1_3:+47685966 None:intergenic
TGAAGGAGAGCCTGTTAAAA+GGG 0.519670 1_3:-47687756 Msa0121630:CDS
ATCCATGAGGGTCAAGAGCT+GGG 0.519780 1_3:+47687334 None:intergenic
GGCATATCGTCCAGTTAGGA+AGG 0.520634 1_3:-47687885 Msa0121630:CDS
TCATCAACGACGAGACGGTT+CGG 0.521611 1_3:+47689320 None:intergenic
GCAACAACACAATACTCAGC+AGG 0.522065 1_3:+47687800 None:intergenic
AGATTTGCCGACAACAGTGC+TGG 0.524300 1_3:-47685395 Msa0121630:CDS
TTTGGAATGTCACCTTCAAA+GGG 0.524681 1_3:-47686523 Msa0121630:CDS
TTTGCAACTGCAAGTGCTGG+CGG 0.527145 1_3:-47685339 Msa0121630:CDS
CCAATAGACTTGAATAATTG+TGG 0.528305 1_3:+47687632 None:intergenic
GATGTCAACATCCTTTGCAA+TGG 0.530887 1_3:+47685848 None:intergenic
CTGTGGATGATACTATTGAA+GGG 0.532423 1_3:-47688906 Msa0121630:CDS
GCCAGCTTTGACATGATCTC+AGG 0.533324 1_3:+47687497 None:intergenic
GGCTCAGATTCGGGAATTGG+TGG 0.533657 1_3:-47687672 Msa0121630:CDS
TCTACTACGACCTGGACGGC+TGG 0.534075 1_3:-47685946 Msa0121630:CDS
GGCAATAGCTTTGGCCAAGA+GGG 0.537496 1_3:+47686465 None:intergenic
GGATTCAGGTTGGTTAGCCA+TGG 0.537678 1_3:+47689504 None:intergenic
TATAATGTCAGGTCGATTAG+TGG 0.537689 1_3:+47685977 None:intergenic
AGTGCCACCAGCACTGTTGT+CGG 0.538206 1_3:+47685388 None:intergenic
ATACTATTGAAGGGGTTACT+GGG 0.538555 1_3:-47688897 Msa0121630:CDS
AAATGTTAAGCGAGAACTCC+AGG 0.539350 1_3:-47686673 Msa0121630:CDS
TGGTTGTGGTAAAACCCTCT+TGG 0.543623 1_3:-47686479 Msa0121630:CDS
ATATCTTCCCAGCTGCAATT+GGG 0.543834 1_3:+47686708 None:intergenic
GATATGTTCCTTGTGAGAGG+GGG 0.547635 1_3:-47687860 Msa0121630:CDS
AATAATTGTGGATGCCTCAA+AGG 0.548058 1_3:+47687644 None:intergenic
TCCTGAGATCATGTCAAAGC+TGG 0.550232 1_3:-47687498 Msa0121630:CDS
TAATCCTGAAGCTATGGAAG+AGG 0.550285 1_3:-47685570 Msa0121630:CDS
TGATTTAGAAAAGATTGCTA+AGG 0.550906 1_3:-47687044 Msa0121630:CDS
TACAGAAATGGACGGAATGT+CGG 0.552742 1_3:-47686027 Msa0121630:CDS
AAGGGTCAGGGCAGCTGCAG+CGG 0.553332 1_3:+47685361 None:intergenic
CAGCACTTGCAGTTGCAAAA+GGG 0.554347 1_3:+47685343 None:intergenic
AAGTGAATAAAGAAAGTGAG+AGG 0.556709 1_3:+47689574 None:intergenic
GAAAACTGTGTTTATCATTG+GGG 0.557648 1_3:-47686000 Msa0121630:CDS
CAGCTTTGAATATCTGATGT+CGG 0.557757 1_3:+47685886 None:intergenic
GCCTGTTAAAAGGGAAGATG+AGG 0.557817 1_3:-47687747 Msa0121630:CDS
AGATGAAGTTGGACGTCTTG+AGG 0.558009 1_3:-47687195 Msa0121630:CDS
GAGATCATGTCAAAGCTGGC+TGG 0.559220 1_3:-47687494 Msa0121630:CDS
AAACCACATTGTGAGTAGCT+CGG 0.560700 1_3:+47686405 None:intergenic
ACTGTTTCACGGAGAGCAGA+AGG 0.564595 1_3:+47686845 None:intergenic
CCATAACAATTACATGCGCA+CGG 0.568519 1_3:+47687300 None:intergenic
TAGCATACTTGCAAGCGCGC+TGG 0.572912 1_3:+47685769 None:intergenic
TGCTGAGATACTTAACTCAA+TGG 0.573485 1_3:-47686912 Msa0121630:CDS
CTGGGACCATATATGGTCAC+GGG 0.576187 1_3:-47685105 Msa0121630:three_prime_UTR
AAACAATCTTAGGTTAGACT+TGG 0.581942 1_3:-47688991 Msa0121630:intron
TTGGTGTGAAGCCACCAAAA+GGG 0.584782 1_3:-47687613 Msa0121630:CDS
CAAACTTTGCAGCAGTCAAG+AGG 0.585980 1_3:-47685434 Msa0121630:CDS
GCGAGTTCATATTCTTCCTG+TGG 0.586206 1_3:-47688923 Msa0121630:CDS
GTTGGTTATGATGATGTTGG+TGG 0.586235 1_3:-47687710 Msa0121630:CDS
TCTGGGACCATATATGGTCA+CGG 0.589674 1_3:-47685106 Msa0121630:three_prime_UTR
GGAGATATGTTCCTTGTGAG+AGG 0.590793 1_3:-47687863 Msa0121630:CDS
AGAGGATAATGAAGACGATG+AGG 0.590957 1_3:-47685552 Msa0121630:CDS
AACGAAGCGCGATTTCAGTA+CGG 0.592595 1_3:-47689366 Msa0121630:CDS
AGATATGTTCCTTGTGAGAG+GGG 0.593916 1_3:-47687861 Msa0121630:CDS
GAGGTTGGTTATGATGATGT+TGG 0.597279 1_3:-47687713 Msa0121630:CDS
AAAGAGTTGAAGTTTCTCCA+TGG 0.598637 1_3:+47689253 None:intergenic
TTCAGGTTGGTTAGCCATGG+AGG 0.600074 1_3:+47689507 None:intergenic
GACCCTGCTCTACTACGACC+TGG 0.600678 1_3:-47685954 Msa0121630:CDS
GAGATATGTTCCTTGTGAGA+GGG 0.602152 1_3:-47687862 Msa0121630:CDS
ATCAGCACCAACATAACCAT+GGG 0.603295 1_3:+47687018 None:intergenic
AGATGAGGATCGTTTAGATG+AGG 0.604669 1_3:-47687732 Msa0121630:CDS
GCATCGACCCTGCTCTTCGG+AGG 0.608582 1_3:-47687256 Msa0121630:CDS
TGTGGATGATACTATTGAAG+GGG 0.608629 1_3:-47688905 Msa0121630:CDS
CAGCTTCATCAACGACGAGA+CGG 0.608880 1_3:+47689315 None:intergenic
TTAAAGTCTTACCAGATCCA+GGG 0.612077 1_3:+47687573 None:intergenic
TGCAGCTGGGAAGATATTGG+TGG 0.612280 1_3:-47686702 Msa0121630:CDS
ATTGGTGTACCAGATGAAGT+TGG 0.615281 1_3:-47687206 Msa0121630:CDS
GGGAATCCTCGTCTGGAAGG+GGG 0.617154 1_3:+47685907 None:intergenic
GCAGACTGTTCAATATCCAG+TGG 0.617349 1_3:-47686569 Msa0121630:intron
AAGGAAACCCATGGTTATGT+TGG 0.618105 1_3:-47687025 Msa0121630:CDS
AGACTCCATTGCTCCAAAGA+GGG 0.619206 1_3:-47687393 Msa0121630:CDS
TTGCAGTTGCAAAAGGGTCA+GGG 0.619961 1_3:+47685349 None:intergenic
CATAACAATTACATGCGCAC+GGG 0.621798 1_3:+47687301 None:intergenic
ACGAATCGGAGGATTCAGGT+TGG 0.622076 1_3:+47689494 None:intergenic
TAGACTCCATTGCTCCAAAG+AGG 0.622591 1_3:-47687394 Msa0121630:CDS
GTCCAGGTCGTAGTAGAGCA+GGG 0.623019 1_3:+47685952 None:intergenic
GAGTGAAAGTAATCTGAGGA+AGG 0.624269 1_3:-47687468 Msa0121630:CDS
AGTGAATAAAGAAAGTGAGA+GGG 0.625061 1_3:+47689575 None:intergenic
GCTCTTGCCAAGTACACTCA+AGG 0.625937 1_3:-47685822 Msa0121630:CDS
AAACTTTGCAGCAGTCAAGA+GGG 0.627316 1_3:-47685433 Msa0121630:CDS
CCTTCAATAGTATCATCCAC+AGG 0.627350 1_3:+47688907 None:intergenic
GGATTTAAGCCCATCCATGA+GGG 0.627404 1_3:+47687322 None:intergenic
TGGAATGTCACCTTCAAAGG+GGG 0.628082 1_3:-47686521 Msa0121630:CDS
TATAAGAGAAAACATCGAGA+AGG 0.629031 1_3:-47685748 Msa0121630:intron
AAGATTGCTAAGGAAACCCA+TGG 0.630077 1_3:-47687034 Msa0121630:CDS
TGGCAATAGCTTTGGCCAAG+AGG 0.630157 1_3:+47686464 None:intergenic
AACTGTAGACCTAACTGTAG+AGG 0.630782 1_3:+47685301 None:intergenic
AGAAAGTGAGGCTAATGTGA+GGG 0.635263 1_3:-47686380 Msa0121630:CDS
TTCCAAACCTCCGAAGAGCA+GGG 0.636312 1_3:+47687249 None:intergenic
TCATCAAAGAAAAGAACACA+TGG 0.639306 1_3:+47686328 None:intergenic
GCATATCGTCCAGTTAGGAA+GGG 0.644679 1_3:-47687884 Msa0121630:CDS
GGAAGAGGATTACGAATCGG+AGG 0.645434 1_3:+47689483 None:intergenic
AATCAGCACCAACATAACCA+TGG 0.646369 1_3:+47687017 None:intergenic
CTGCTCTACTACGACCTGGA+CGG 0.648155 1_3:-47685950 Msa0121630:CDS
AAGTACACTCAAGGCTTCAG+TGG 0.648697 1_3:-47685813 Msa0121630:CDS
AATGTGGTTTGGAGAAAGTG+AGG 0.650668 1_3:-47686392 Msa0121630:CDS
TGAAGTGCCCAATTGCAGCT+GGG 0.653466 1_3:-47686715 Msa0121630:CDS
TTTGCCGACAACAGTGCTGG+TGG 0.655107 1_3:-47685392 Msa0121630:CDS
ATATGTTCCTTGTGAGAGGG+GGG 0.655286 1_3:-47687859 Msa0121630:CDS
TAAAGTCTTACCAGATCCAG+GGG 0.658292 1_3:+47687574 None:intergenic
GAGAAAGTGAGGCTAATGTG+AGG 0.663629 1_3:-47686381 Msa0121630:CDS
GGGATTTAAGCCCATCCATG+AGG 0.663629 1_3:+47687321 None:intergenic
CAACAACACAATACTCAGCA+GGG 0.666697 1_3:+47687801 None:intergenic
TGGTGGTGTTAGAAAGCAGA+TGG 0.677645 1_3:-47687693 Msa0121630:CDS
TGTCAACATCCTTTGCAATG+GGG 0.677894 1_3:+47685850 None:intergenic
GTGAGAGTGAAAGTAATCTG+AGG 0.683292 1_3:-47687472 Msa0121630:CDS
AGGACATTGAGAGAGAAAGG+AGG 0.691679 1_3:-47685601 Msa0121630:CDS
TTGGAATGTCACCTTCAAAG+GGG 0.692077 1_3:-47686522 Msa0121630:CDS
CAACTGCTTACAGAAATGGA+CGG 0.693068 1_3:-47686035 Msa0121630:CDS
AGTAGTTCAGGAGATGCTGG+TGG 0.701928 1_3:-47686080 Msa0121630:CDS
GTCCCGAGCTACTCACAATG+TGG 0.708759 1_3:-47686408 Msa0121630:CDS
AGGATTGCTTGATCCAAGTG+CGG 0.712751 1_3:+47686865 None:intergenic
TGAGATACTTAACTCAATGG+CGG 0.713084 1_3:-47686909 Msa0121630:CDS
TAACTGGACGATATGCCTCG+AGG 0.731678 1_3:+47687891 None:intergenic
TGTTAAGCGAGAACTCCAGG+AGG 0.754733 1_3:-47686670 Msa0121630:intron
AAAGTCTTACCAGATCCAGG+GGG 0.808828 1_3:+47687575 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGATAATATATTTTTTTGA+TGG - chr1_3:47686410-47686429 Msa0121630:CDS 10.0%
!!! TTTTTGTTTATTTTTCAGTA+AGG - chr1_3:47685187-47685206 Msa0121630:three_prime_UTR 15.0%
!!! TTTTGTTTATTTTTCAGTAA+GGG - chr1_3:47685188-47685207 Msa0121630:three_prime_UTR 15.0%
!! AAAAACTGTTCAATAAAAAA+GGG + chr1_3:47685870-47685889 None:intergenic 15.0%
!!! TTTTCTATTATTTAATTTGC+AGG - chr1_3:47687509-47687528 Msa0121630:CDS 15.0%
!!! TTTAATTTAAACAGTTAATG+AGG + chr1_3:47688447-47688466 None:intergenic 15.0%
!!! AAACATTTGAAACAATTATT+TGG - chr1_3:47689442-47689461 Msa0121630:intron 15.0%
!! AATAAGCTAATATTAGAAAT+AGG + chr1_3:47689616-47689635 None:intergenic 15.0%
!! AAATTGAATTGAGAAATTGA+AGG + chr1_3:47685139-47685158 None:intergenic 20.0%
!!! CTTTTTACAAAAGGATTTTA+GGG + chr1_3:47685417-47685436 None:intergenic 20.0%
!!! TCTTTTTACAAAAGGATTTT+AGG + chr1_3:47685418-47685437 None:intergenic 20.0%
!!! AAATCAGATCTTTTTACAAA+AGG + chr1_3:47685426-47685445 None:intergenic 20.0%
!!! TGATTCATTGTTGATTTATT+AGG - chr1_3:47685479-47685498 Msa0121630:CDS 20.0%
!!! GATTCATTGTTGATTTATTA+GGG - chr1_3:47685480-47685499 Msa0121630:CDS 20.0%
!! TTTATTAGGGTAAAAAAGAA+AGG - chr1_3:47685493-47685512 Msa0121630:CDS 20.0%
!! TATCCAAACAATAATCAAAA+CGG + chr1_3:47685814-47685833 None:intergenic 20.0%
!! GAAAAACTGTTCAATAAAAA+AGG + chr1_3:47685871-47685890 None:intergenic 20.0%
!!! TTGTATCATAGATGTATTTT+TGG - chr1_3:47686305-47686324 Msa0121630:intron 20.0%
!!! TTGATAAGATATTTTGACAA+TGG - chr1_3:47686342-47686361 Msa0121630:CDS 20.0%
!! ATATTATCATGAATCAACAA+TGG + chr1_3:47686400-47686419 None:intergenic 20.0%
!! AAATGAATATCTATTCACAA+GGG + chr1_3:47686487-47686506 None:intergenic 20.0%
!! AAAATGAATATCTATTCACA+AGG + chr1_3:47686488-47686507 None:intergenic 20.0%
!!! TTTGTTCTGTCATTTTTTAT+TGG - chr1_3:47686582-47686601 Msa0121630:intron 20.0%
!! TAGATAAATAACACAACTTA+GGG + chr1_3:47687467-47687486 None:intergenic 20.0%
!! TTTATCTGATAATCTAATCA+TGG + chr1_3:47688314-47688333 None:intergenic 20.0%
!!! AATCAAAAGGTACATAAATT+AGG + chr1_3:47689333-47689352 None:intergenic 20.0%
!!! TACCTTTTGATTTGTTTTTA+TGG - chr1_3:47689341-47689360 Msa0121630:CDS 20.0%
!! TTCCATAAAAACAAATCAAA+AGG + chr1_3:47689346-47689365 None:intergenic 20.0%
!! ATTGTTTCAAATGTTTAGAA+AGG + chr1_3:47689438-47689457 None:intergenic 20.0%
!! ATTGTTGAATTTATTCTTCA+AGG + chr1_3:47689573-47689592 None:intergenic 20.0%
!!! TTTTGAATTAGGGTTAGTTT+GGG + chr1_3:47685394-47685413 None:intergenic 25.0%
!!! GATTTTAGGGTTTTGAATTA+GGG + chr1_3:47685404-47685423 None:intergenic 25.0%
! TATGTGATTAGTATGTGATT+AGG - chr1_3:47685447-47685466 Msa0121630:CDS 25.0%
! ACCTTATTCATTCTTATCTT+TGG + chr1_3:47685560-47685579 None:intergenic 25.0%
! ATCCAAACAATAATCAAAAC+GGG + chr1_3:47685813-47685832 None:intergenic 25.0%
!! AGCACAAAGCTAATTTTATT+TGG - chr1_3:47685942-47685961 Msa0121630:CDS 25.0%
!!! ATTGTATCATAGCTTTGTTT+TGG - chr1_3:47686372-47686391 Msa0121630:CDS 25.0%
!!! TTGTATCATAGCTTTGTTTT+GGG - chr1_3:47686373-47686392 Msa0121630:CDS 25.0%
! TGTTCATTGAAGTTAAATGT+TGG - chr1_3:47686542-47686561 Msa0121630:CDS 25.0%
! ATAAGCTGCAAAAGAAAAAA+AGG + chr1_3:47686664-47686683 None:intergenic 25.0%
!!! TCATATTTTTTGTATGGATG+CGG + chr1_3:47687412-47687431 None:intergenic 25.0%
!!! CAAGCTTCATATTTTTTGTA+TGG + chr1_3:47687418-47687437 None:intergenic 25.0%
! AGATAAATAACACAACTTAG+GGG + chr1_3:47687466-47687485 None:intergenic 25.0%
! CTAGATAAATAACACAACTT+AGG + chr1_3:47687468-47687487 None:intergenic 25.0%
! TGATTTAGAAAAGATTGCTA+AGG - chr1_3:47687533-47687552 Msa0121630:CDS 25.0%
! CATAAAAGATTATTGAGCAA+TGG + chr1_3:47687791-47687810 None:intergenic 25.0%
! AAGAAAACTGTGTTTATCAT+TGG - chr1_3:47688575-47688594 Msa0121630:intron 25.0%
! AGAAAACTGTGTTTATCATT+GGG - chr1_3:47688576-47688595 Msa0121630:intron 25.0%
! ATAGTGTACATAAGTCAAAA+GGG + chr1_3:47688885-47688904 None:intergenic 25.0%
! AATAGTGTACATAAGTCAAA+AGG + chr1_3:47688886-47688905 None:intergenic 25.0%
!! TTCTGTAGAACTTTTCTAAT+TGG - chr1_3:47688909-47688928 Msa0121630:CDS 25.0%
!!! TGATTTGTTTTTATGGAATC+TGG - chr1_3:47689348-47689367 Msa0121630:CDS 25.0%
!! TGATGTACCAATATCTTTTA+CGG + chr1_3:47689404-47689423 None:intergenic 25.0%
! AAAGATATTGGTACATCATT+AGG - chr1_3:47689406-47689425 Msa0121630:intron 25.0%
!! TTTGGTTAGGTTTTATAGTG+TGG + chr1_3:47684982-47685001 None:intergenic 30.0%
AGTGAATAAAGAAAGTGAGA+GGG + chr1_3:47685005-47685024 None:intergenic 30.0%
AAGTGAATAAAGAAAGTGAG+AGG + chr1_3:47685006-47685025 None:intergenic 30.0%
!!! GTTTTGAATTAGGGTTAGTT+TGG + chr1_3:47685395-47685414 None:intergenic 30.0%
!!! GGATTTTAGGGTTTTGAATT+AGG + chr1_3:47685405-47685424 None:intergenic 30.0%
GCCAAAGATAAGAATGAATA+AGG - chr1_3:47685556-47685575 Msa0121630:CDS 30.0%
AAACAATCTTAGGTTAGACT+TGG - chr1_3:47685586-47685605 Msa0121630:CDS 30.0%
! ATAAGGTTAGTTAGACTGTT+TGG + chr1_3:47686212-47686231 None:intergenic 30.0%
AACAACAGTATTCTTTACGA+AGG + chr1_3:47686444-47686463 None:intergenic 30.0%
CCAATAGACTTGAATAATTG+TGG + chr1_3:47686948-47686967 None:intergenic 30.0%
CCACAATTATTCAAGTCTAT+TGG - chr1_3:47686945-47686964 Msa0121630:CDS 30.0%
! GCTTTCTTTTTCTGTATCAA+TGG - chr1_3:47687056-47687075 Msa0121630:intron 30.0%
TCATCAATGAAGATGATTGA+GGG + chr1_3:47687161-47687180 None:intergenic 30.0%
GATAAATAACACAACTTAGG+GGG + chr1_3:47687465-47687484 None:intergenic 30.0%
GTTTAGTACTTACTGTTTCA+CGG + chr1_3:47687746-47687765 None:intergenic 30.0%
AAAGATTATTGAGCAATGGA+GGG + chr1_3:47687787-47687806 None:intergenic 30.0%
AAAAGATTATTGAGCAATGG+AGG + chr1_3:47687788-47687807 None:intergenic 30.0%
AAAGATGGAGTTACAAAGTT+TGG + chr1_3:47687824-47687843 None:intergenic 30.0%
CAAACTTCTCAAATTTCTCA+GGG + chr1_3:47688038-47688057 None:intergenic 30.0%
GCAAACTTCATTAGTATCAA+AGG - chr1_3:47688147-47688166 Msa0121630:intron 30.0%
TCATCAAAGAAAAGAACACA+TGG + chr1_3:47688252-47688271 None:intergenic 30.0%
CTCATGAAGAGGAAATTTAT+CGG - chr1_3:47688367-47688386 Msa0121630:intron 30.0%
AAACAATTACAGGAGCTTAA+AGG + chr1_3:47688424-47688443 None:intergenic 30.0%
GTTAATGAGGAAACAATTAC+AGG + chr1_3:47688434-47688453 None:intergenic 30.0%
GAAAACTGTGTTTATCATTG+GGG - chr1_3:47688577-47688596 Msa0121630:intron 30.0%
TATAAGAGAAAACATCGAGA+AGG - chr1_3:47688829-47688848 Msa0121630:intron 30.0%
AAAAGGGAATGAGAGAAAAA+AGG + chr1_3:47688869-47688888 None:intergenic 30.0%
!!! CAGTTTGCTGTCTTTTATTT+TGG - chr1_3:47689294-47689313 Msa0121630:CDS 30.0%
! ATGTACCAATATCTTTTACG+GGG + chr1_3:47689402-47689421 None:intergenic 30.0%
! GATGTACCAATATCTTTTAC+GGG + chr1_3:47689403-47689422 None:intergenic 30.0%
!! GTTAGGTTTTATAGTGTGGT+GGG + chr1_3:47684978-47684997 None:intergenic 35.0%
ATAAAGAAAGTGAGAGGGTT+TGG + chr1_3:47685000-47685019 None:intergenic 35.0%
GATGAAGAGAATTGGGAATT+GGG + chr1_3:47685045-47685064 None:intergenic 35.0%
AGATGAAGAGAATTGGGAAT+TGG + chr1_3:47685046-47685065 None:intergenic 35.0%
GGAAGAAGATGAAGAGAATT+GGG + chr1_3:47685052-47685071 None:intergenic 35.0%
AGGAAGAAGATGAAGAGAAT+TGG + chr1_3:47685053-47685072 None:intergenic 35.0%
AAAGAGTTGAAGTTTCTCCA+TGG + chr1_3:47685327-47685346 None:intergenic 35.0%
AGGTTGTGAGAAACAATCTT+AGG - chr1_3:47685576-47685595 Msa0121630:CDS 35.0%
CAATGTCCTGATGTCAAATA+TGG - chr1_3:47685628-47685647 Msa0121630:intron 35.0%
CTGTGGATGATACTATTGAA+GGG - chr1_3:47685671-47685690 Msa0121630:intron 35.0%
TGTGGATGATACTATTGAAG+GGG - chr1_3:47685672-47685691 Msa0121630:intron 35.0%
ATACTATTGAAGGGGTTACT+GGG - chr1_3:47685680-47685699 Msa0121630:intron 35.0%
!!! GACCCGTTTTGATTATTGTT+TGG - chr1_3:47685808-47685827 Msa0121630:CDS 35.0%
AAGATTAAAGACAAGCGCTT+GGG + chr1_3:47685983-47686002 None:intergenic 35.0%
AAAGATTAAAGACAAGCGCT+TGG + chr1_3:47685984-47686003 None:intergenic 35.0%
TGAGCTAACTAACTGACATA+AGG + chr1_3:47686229-47686248 None:intergenic 35.0%
AAGGGTCAATGTACAGAAAA+GGG + chr1_3:47686469-47686488 None:intergenic 35.0%
AATAATTGTGGATGCCTCAA+AGG + chr1_3:47686936-47686955 None:intergenic 35.0%
! TACAACAAAATCCCTTTTGG+TGG + chr1_3:47686978-47686997 None:intergenic 35.0%
! CCATACAACAAAATCCCTTT+TGG + chr1_3:47686981-47687000 None:intergenic 35.0%
!! CCAAAAGGGATTTTGTTGTA+TGG - chr1_3:47686978-47686997 Msa0121630:CDS 35.0%
TTAAAGTCTTACCAGATCCA+GGG + chr1_3:47687007-47687026 None:intergenic 35.0%
ATTAAAGTCTTACCAGATCC+AGG + chr1_3:47687008-47687027 None:intergenic 35.0%
CTCATCAATGAAGATGATTG+AGG + chr1_3:47687162-47687181 None:intergenic 35.0%
TTTGATCGGGAGATTGATAT+TGG - chr1_3:47687353-47687372 Msa0121630:CDS 35.0%
CATCAATGGTTTCATCTTCT+AGG + chr1_3:47687647-47687666 None:intergenic 35.0%
GTTAAGTATCTCAGCATCAA+TGG + chr1_3:47687661-47687680 None:intergenic 35.0%
TGCTGAGATACTTAACTCAA+TGG - chr1_3:47687665-47687684 Msa0121630:CDS 35.0%
TGAGATACTTAACTCAATGG+CGG - chr1_3:47687668-47687687 Msa0121630:CDS 35.0%
TGTTTCTTATCATCAGCTTC+TGG - chr1_3:47687962-47687981 Msa0121630:intron 35.0%
GTTTCTTATCATCAGCTTCT+GGG - chr1_3:47687963-47687982 Msa0121630:intron 35.0%
CCAAACTTCTCAAATTTCTC+AGG + chr1_3:47688039-47688058 None:intergenic 35.0%
CCTGAGAAATTTGAGAAGTT+TGG - chr1_3:47688036-47688055 Msa0121630:intron 35.0%
! TTTGGAATGTCACCTTCAAA+GGG - chr1_3:47688054-47688073 Msa0121630:intron 35.0%
ACATTCATTGGCAATAGCTT+TGG + chr1_3:47688124-47688143 None:intergenic 35.0%
! GAAGTTTGCTTGACATTCAT+TGG + chr1_3:47688136-47688155 None:intergenic 35.0%
! GAAATTTTTGACAAAGCTCG+TGG - chr1_3:47688219-47688238 Msa0121630:intron 35.0%
ACTTGATTCTATTGCAACTC+AGG - chr1_3:47688272-47688291 Msa0121630:intron 35.0%
AATCTAATCATGGCTCGATA+TGG + chr1_3:47688304-47688323 None:intergenic 35.0%
GAATCAACTGCTTACAGAAA+TGG - chr1_3:47688538-47688557 Msa0121630:intron 35.0%
TATAATGTCAGGTCGATTAG+TGG + chr1_3:47688603-47688622 None:intergenic 35.0%
!! AGCTTTGAATATCTGATGTC+GGG + chr1_3:47688693-47688712 None:intergenic 35.0%
!! CAGCTTTGAATATCTGATGT+CGG + chr1_3:47688694-47688713 None:intergenic 35.0%
ATGTCAACATCCTTTGCAAT+GGG + chr1_3:47688731-47688750 None:intergenic 35.0%
!! AACATCGAGAAGGTACATTT+TGG - chr1_3:47688839-47688858 Msa0121630:intron 35.0%
!! ACATCGAGAAGGTACATTTT+GGG - chr1_3:47688840-47688859 Msa0121630:intron 35.0%
ACAATTATTTGGTCAGCTTC+TGG - chr1_3:47689453-47689472 Msa0121630:intron 35.0%
CAATTATTTGGTCAGCTTCT+GGG - chr1_3:47689454-47689473 Msa0121630:intron 35.0%
!! GGTTAGGTTTTATAGTGTGG+TGG + chr1_3:47684979-47684998 None:intergenic 40.0%
GAAGGAATTGAGATCTGAGA+AGG + chr1_3:47685121-47685140 None:intergenic 40.0%
TGAAGTTTCTCCATGGTTTC+AGG + chr1_3:47685320-47685339 None:intergenic 40.0%
GAGAAACTTCAACTCTTTCG+CGG - chr1_3:47685329-47685348 Msa0121630:CDS 40.0%
CGGTGATACAATTCTGATCA+AGG - chr1_3:47685349-47685368 Msa0121630:CDS 40.0%
CGCTTTCCATATTTGACATC+AGG + chr1_3:47685637-47685656 None:intergenic 40.0%
CCTTCAATAGTATCATCCAC+AGG + chr1_3:47685673-47685692 None:intergenic 40.0%
CCTGTGGATGATACTATTGA+AGG - chr1_3:47685670-47685689 Msa0121630:intron 40.0%
GATACTATTGAAGGGGTTAC+TGG - chr1_3:47685679-47685698 Msa0121630:intron 40.0%
!!! CTTTTTTCAAGCCTCGTCTA+GGG + chr1_3:47686272-47686291 None:intergenic 40.0%
!!! TCTTTTTTCAAGCCTCGTCT+AGG + chr1_3:47686273-47686292 None:intergenic 40.0%
CAAGGGTCAATGTACAGAAA+AGG + chr1_3:47686470-47686489 None:intergenic 40.0%
! TTTTGCAGCTTATTTCCTCG+AGG - chr1_3:47686671-47686690 Msa0121630:CDS 40.0%
AACATATCTCCCTTCCTAAC+TGG + chr1_3:47686705-47686724 None:intergenic 40.0%
GAGATATGTTCCTTGTGAGA+GGG - chr1_3:47686715-47686734 Msa0121630:CDS 40.0%
AGATATGTTCCTTGTGAGAG+GGG - chr1_3:47686716-47686735 Msa0121630:CDS 40.0%
! GATGAGAAGTGTGGAATTCA+AGG - chr1_3:47686740-47686759 Msa0121630:intron 40.0%
CAACAACACAATACTCAGCA+GGG + chr1_3:47686779-47686798 None:intergenic 40.0%
TCACAGAAAATCTCAGTGTC+AGG + chr1_3:47686804-47686823 None:intergenic 40.0%
! GACACTGAGATTTTCTGTGA+AGG - chr1_3:47686804-47686823 Msa0121630:intron 40.0%
TGAAGGAGAGCCTGTTAAAA+GGG - chr1_3:47686821-47686840 Msa0121630:intron 40.0%
! TCCTCATCTTCCCTTTTAAC+AGG + chr1_3:47686834-47686853 None:intergenic 40.0%
AGATGAGGATCGTTTAGATG+AGG - chr1_3:47686845-47686864 Msa0121630:intron 40.0%
! GAGGTTGGTTATGATGATGT+TGG - chr1_3:47686864-47686883 Msa0121630:CDS 40.0%
! GTTGGTTATGATGATGTTGG+TGG - chr1_3:47686867-47686886 Msa0121630:CDS 40.0%
TAAAGTCTTACCAGATCCAG+GGG + chr1_3:47687006-47687025 None:intergenic 40.0%
GTGAGAGTGAAAGTAATCTG+AGG - chr1_3:47687105-47687124 Msa0121630:intron 40.0%
GAGTGAAAGTAATCTGAGGA+AGG - chr1_3:47687109-47687128 Msa0121630:intron 40.0%
CATAACAATTACATGCGCAC+GGG + chr1_3:47687279-47687298 None:intergenic 40.0%
CCATAACAATTACATGCGCA+CGG + chr1_3:47687280-47687299 None:intergenic 40.0%
CGTGCGCATGTAATTGTTAT+GGG - chr1_3:47687278-47687297 Msa0121630:CDS 40.0%
ATTGGTGTACCAGATGAAGT+TGG - chr1_3:47687371-47687390 Msa0121630:CDS 40.0%
AAGATTGCTAAGGAAACCCA+TGG - chr1_3:47687543-47687562 Msa0121630:CDS 40.0%
AAGGAAACCCATGGTTATGT+TGG - chr1_3:47687552-47687571 Msa0121630:CDS 40.0%
ATCAGCACCAACATAACCAT+GGG + chr1_3:47687562-47687581 None:intergenic 40.0%
AATCAGCACCAACATAACCA+TGG + chr1_3:47687563-47687582 None:intergenic 40.0%
TCAGTGCATCAGAGAGAAAA+TGG - chr1_3:47687611-47687630 Msa0121630:CDS 40.0%
TCCATCTTTGCTAATGAACC+AGG - chr1_3:47687835-47687854 Msa0121630:CDS 40.0%
ACCTGGTTCATTAGCAAAGA+TGG + chr1_3:47687839-47687858 None:intergenic 40.0%
ATATCTTCCCAGCTGCAATT+GGG + chr1_3:47687872-47687891 None:intergenic 40.0%
AATATCTTCCCAGCTGCAAT+TGG + chr1_3:47687873-47687892 None:intergenic 40.0%
AATTGCAGCTGGGAAGATAT+TGG - chr1_3:47687872-47687891 Msa0121630:CDS 40.0%
AAATGTTAAGCGAGAACTCC+AGG - chr1_3:47687904-47687923 Msa0121630:intron 40.0%
! GTTTGGAATGTCACCTTCAA+AGG - chr1_3:47688053-47688072 Msa0121630:intron 40.0%
TTGGAATGTCACCTTCAAAG+GGG - chr1_3:47688055-47688074 Msa0121630:intron 40.0%
AAACCACATTGTGAGTAGCT+CGG + chr1_3:47688175-47688194 None:intergenic 40.0%
! AATGTGGTTTGGAGAAAGTG+AGG - chr1_3:47688185-47688204 Msa0121630:intron 40.0%
AGAAAGTGAGGCTAATGTGA+GGG - chr1_3:47688197-47688216 Msa0121630:intron 40.0%
GCACACTAATTAGCACTCTA+TGG + chr1_3:47688402-47688421 None:intergenic 40.0%
TACTACCTCTCTGCAAGATA+AGG + chr1_3:47688481-47688500 None:intergenic 40.0%
CAACTGCTTACAGAAATGGA+CGG - chr1_3:47688542-47688561 Msa0121630:intron 40.0%
TACAGAAATGGACGGAATGT+CGG - chr1_3:47688550-47688569 Msa0121630:intron 40.0%
TGTCAACATCCTTTGCAATG+GGG + chr1_3:47688730-47688749 None:intergenic 40.0%
GATGTCAACATCCTTTGCAA+TGG + chr1_3:47688732-47688751 None:intergenic 40.0%
!! CATCGAGAAGGTACATTTTG+GGG - chr1_3:47688841-47688860 Msa0121630:intron 40.0%
! TTTTCTCCCTAACTTCTCTG+TGG - chr1_3:47688952-47688971 Msa0121630:CDS 40.0%
AAGCGATAATCCTGAAGCTA+TGG - chr1_3:47689001-47689020 Msa0121630:intron 40.0%
TAATCCTGAAGCTATGGAAG+AGG - chr1_3:47689007-47689026 Msa0121630:intron 40.0%
TTATCCTCTTCCATAGCTTC+AGG + chr1_3:47689014-47689033 None:intergenic 40.0%
AGAGGATAATGAAGACGATG+AGG - chr1_3:47689025-47689044 Msa0121630:intron 40.0%
TCTTGACTGCTGCAAAGTTT+GGG + chr1_3:47689144-47689163 None:intergenic 40.0%
AAACTTTGCAGCAGTCAAGA+GGG - chr1_3:47689144-47689163 Msa0121630:intron 40.0%
TGAAGATGACCTCTACAGTT+AGG - chr1_3:47689267-47689286 Msa0121630:CDS 40.0%
AACTGTAGACCTAACTGTAG+AGG + chr1_3:47689279-47689298 None:intergenic 40.0%
CATTGCCCCGTAAAAGATAT+TGG - chr1_3:47689394-47689413 Msa0121630:intron 40.0%
! GAAAGTGAGAGGGTTTGGTT+AGG + chr1_3:47684995-47685014 None:intergenic 45.0%
CTCTTCATCTTCTTCCTCCA+TGG - chr1_3:47685056-47685075 Msa0121630:three_prime_UTR 45.0%
GATTACGAATCGGAGGATTC+AGG + chr1_3:47685090-47685109 None:intergenic 45.0%
GGAGGAAGAGGATTACGAAT+CGG + chr1_3:47685100-47685119 None:intergenic 45.0%
GGAATTGAGATCTGAGAAGG+AGG + chr1_3:47685118-47685137 None:intergenic 45.0%
AACGAAGCGCGATTTCAGTA+CGG - chr1_3:47685211-47685230 Msa0121630:three_prime_UTR 45.0%
GCGAGTTCATATTCTTCCTG+TGG - chr1_3:47685654-47685673 Msa0121630:intron 45.0%
GCATATCGTCCAGTTAGGAA+GGG - chr1_3:47686693-47686712 Msa0121630:CDS 45.0%
GGAGATATGTTCCTTGTGAG+AGG - chr1_3:47686714-47686733 Msa0121630:CDS 45.0%
GATATGTTCCTTGTGAGAGG+GGG - chr1_3:47686717-47686736 Msa0121630:CDS 45.0%
ATATGTTCCTTGTGAGAGGG+GGG - chr1_3:47686718-47686737 Msa0121630:CDS 45.0%
GCAACAACACAATACTCAGC+AGG + chr1_3:47686780-47686799 None:intergenic 45.0%
GTGAAGGAGAGCCTGTTAAA+AGG - chr1_3:47686820-47686839 Msa0121630:intron 45.0%
GCCTGTTAAAAGGGAAGATG+AGG - chr1_3:47686830-47686849 Msa0121630:intron 45.0%
GAGGATCGTTTAGATGAGGT+TGG - chr1_3:47686849-47686868 Msa0121630:CDS 45.0%
! TGGTGGTGTTAGAAAGCAGA+TGG - chr1_3:47686884-47686903 Msa0121630:CDS 45.0%
GAAAGCAGATGGCTCAGATT+CGG - chr1_3:47686895-47686914 Msa0121630:CDS 45.0%
AAAGCAGATGGCTCAGATTC+GGG - chr1_3:47686896-47686915 Msa0121630:CDS 45.0%
AATTGGTGGAACTGCCTTTG+AGG - chr1_3:47686919-47686938 Msa0121630:CDS 45.0%
ATTGGTGTGAAGCCACCAAA+AGG - chr1_3:47686963-47686982 Msa0121630:CDS 45.0%
TTGGTGTGAAGCCACCAAAA+GGG - chr1_3:47686964-47686983 Msa0121630:CDS 45.0%
!! ATTTTGTTGTATGGACCCCC+TGG - chr1_3:47686987-47687006 Msa0121630:CDS 45.0%
AAAGTCTTACCAGATCCAGG+GGG + chr1_3:47687005-47687024 None:intergenic 45.0%
CGAGCTGTTGCAAATGAAAC+TGG - chr1_3:47687032-47687051 Msa0121630:CDS 45.0%
TCCTGAGATCATGTCAAAGC+TGG - chr1_3:47687079-47687098 Msa0121630:intron 45.0%
TAGACTCCATTGCTCCAAAG+AGG - chr1_3:47687183-47687202 Msa0121630:CDS 45.0%
AGACTCCATTGCTCCAAAGA+GGG - chr1_3:47687184-47687203 Msa0121630:CDS 45.0%
!! CCATTAGTCTTCTCCCTCTT+TGG + chr1_3:47687200-47687219 None:intergenic 45.0%
CCAAAGAGGGAGAAGACTAA+TGG - chr1_3:47687197-47687216 Msa0121630:CDS 45.0%
GGATTTAAGCCCATCCATGA+GGG + chr1_3:47687258-47687277 None:intergenic 45.0%
CCGTGCGCATGTAATTGTTA+TGG - chr1_3:47687277-47687296 Msa0121630:CDS 45.0%
GGAGGTTTGGAAGGTTTGAT+CGG - chr1_3:47687339-47687358 Msa0121630:CDS 45.0%
GAGGTTTGGAAGGTTTGATC+GGG - chr1_3:47687340-47687359 Msa0121630:CDS 45.0%
TCAAGACGTCCAACTTCATC+TGG + chr1_3:47687383-47687402 None:intergenic 45.0%
AGATGAAGTTGGACGTCTTG+AGG - chr1_3:47687382-47687401 Msa0121630:CDS 45.0%
GAACATTTCAGTACCGCACT+TGG - chr1_3:47687699-47687718 Msa0121630:CDS 45.0%
AGGATTGCTTGATCCAAGTG+CGG + chr1_3:47687715-47687734 None:intergenic 45.0%
AATTGGGCACTTCAACAACC+TGG + chr1_3:47687856-47687875 None:intergenic 45.0%
GCAGACTGTTCAATATCCAG+TGG - chr1_3:47688008-47688027 Msa0121630:intron 45.0%
! AATTTCTCAGGGTGTTCCAC+TGG + chr1_3:47688027-47688046 None:intergenic 45.0%
TGGAATGTCACCTTCAAAGG+GGG - chr1_3:47688056-47688075 Msa0121630:intron 45.0%
TAGAACAGAACCCCCTTTGA+AGG + chr1_3:47688069-47688088 None:intergenic 45.0%
TCAAAGGGGGTTCTGTTCTA+TGG - chr1_3:47688069-47688088 Msa0121630:intron 45.0%
! AAGAGGGTTTTACCACAACC+AGG + chr1_3:47688099-47688118 None:intergenic 45.0%
TGGTTGTGGTAAAACCCTCT+TGG - chr1_3:47688098-47688117 Msa0121630:intron 45.0%
AACCACATTGTGAGTAGCTC+GGG + chr1_3:47688174-47688193 None:intergenic 45.0%
GAGCTACTCACAATGTGGTT+TGG - chr1_3:47688174-47688193 Msa0121630:intron 45.0%
GAGAAAGTGAGGCTAATGTG+AGG - chr1_3:47688196-47688215 Msa0121630:intron 45.0%
ATGTGCTTGTGCTCATGAAG+AGG - chr1_3:47688356-47688375 Msa0121630:intron 45.0%
TTGCAGAGAGGTAGTAGTTC+AGG - chr1_3:47688485-47688504 Msa0121630:intron 45.0%
AGAGCAGGGTCTATAATGTC+AGG + chr1_3:47688614-47688633 None:intergenic 45.0%
! TGCAATGGGGGATTTTCTCA+AGG + chr1_3:47688717-47688736 None:intergenic 45.0%
GAGAAAATCCCCCATTGCAA+AGG - chr1_3:47688718-47688737 Msa0121630:intron 45.0%
GTCAACATCCTTTGCAATGG+GGG + chr1_3:47688729-47688748 None:intergenic 45.0%
ACTGAAGCCTTGAGTGTACT+TGG + chr1_3:47688765-47688784 None:intergenic 45.0%
AAGTACACTCAAGGCTTCAG+TGG - chr1_3:47688764-47688783 Msa0121630:intron 45.0%
AGGACATTGAGAGAGAAAGG+AGG - chr1_3:47688976-47688995 Msa0121630:CDS 45.0%
CTCTTGACTGCTGCAAAGTT+TGG + chr1_3:47689145-47689164 None:intergenic 45.0%
CAAACTTTGCAGCAGTCAAG+AGG - chr1_3:47689143-47689162 Msa0121630:intron 45.0%
TTGCAGTTGCAAAAGGGTCA+GGG + chr1_3:47689231-47689250 None:intergenic 45.0%
CAGCACTTGCAGTTGCAAAA+GGG + chr1_3:47689237-47689256 None:intergenic 45.0%
!! TCAGCTTCTGGGACCATATA+TGG - chr1_3:47689465-47689484 Msa0121630:intron 45.0%
! TCTGGGACCATATATGGTCA+CGG - chr1_3:47689471-47689490 Msa0121630:intron 45.0%
AGAGAACCCGTGACCATATA+TGG + chr1_3:47689481-47689500 None:intergenic 45.0%
! ACGGGTTCTCTCAACTCTTT+TGG - chr1_3:47689490-47689509 Msa0121630:intron 45.0%
! CGGGTTCTCTCAACTCTTTT+GGG - chr1_3:47689491-47689510 Msa0121630:intron 45.0%
! GGGTTCTCTCAACTCTTTTG+GGG - chr1_3:47689492-47689511 Msa0121630:intron 45.0%
!! TTCAGGTTGGTTAGCCATGG+AGG + chr1_3:47685073-47685092 None:intergenic 50.0%
!! GGATTCAGGTTGGTTAGCCA+TGG + chr1_3:47685076-47685095 None:intergenic 50.0%
ACGAATCGGAGGATTCAGGT+TGG + chr1_3:47685086-47685105 None:intergenic 50.0%
GGAAGAGGATTACGAATCGG+AGG + chr1_3:47685097-47685116 None:intergenic 50.0%
GAGATCTGAGAAGGAGGAAG+AGG + chr1_3:47685112-47685131 None:intergenic 50.0%
CGATTTCAGTACGGCGATTC+TGG - chr1_3:47685220-47685239 Msa0121630:three_prime_UTR 50.0%
TCATCAACGACGAGACGGTT+CGG + chr1_3:47685260-47685279 None:intergenic 50.0%
CAGCTTCATCAACGACGAGA+CGG + chr1_3:47685265-47685284 None:intergenic 50.0%
CGCACTTCATCCTGAAACCA+TGG - chr1_3:47685307-47685326 Msa0121630:CDS 50.0%
! CGTCTAGGGCTTGTTTGGAT+TGG + chr1_3:47686258-47686277 None:intergenic 50.0%
ATCCAAACAAGCCCTAGACG+AGG - chr1_3:47686258-47686277 Msa0121630:intron 50.0%
TAACTGGACGATATGCCTCG+AGG + chr1_3:47686689-47686708 None:intergenic 50.0%
TCGAGGCATATCGTCCAGTT+AGG - chr1_3:47686688-47686707 Msa0121630:CDS 50.0%
GGCATATCGTCCAGTTAGGA+AGG - chr1_3:47686692-47686711 Msa0121630:CDS 50.0%
GATGGCTCAGATTCGGGAAT+TGG - chr1_3:47686902-47686921 Msa0121630:CDS 50.0%
! GCCAGCTTTGACATGATCTC+AGG + chr1_3:47687083-47687102 None:intergenic 50.0%
GAGATCATGTCAAAGCTGGC+TGG - chr1_3:47687083-47687102 Msa0121630:intron 50.0%
!! CTTCTCCCTCTTTGGAGCAA+TGG + chr1_3:47687192-47687211 None:intergenic 50.0%
ATCCATGAGGGTCAAGAGCT+GGG + chr1_3:47687246-47687265 None:intergenic 50.0%
AGCTCTTGACCCTCATGGAT+GGG - chr1_3:47687246-47687265 Msa0121630:CDS 50.0%
GGGATTTAAGCCCATCCATG+AGG + chr1_3:47687259-47687278 None:intergenic 50.0%
AGAGCAGGGTCGATGCTATT+GGG + chr1_3:47687317-47687336 None:intergenic 50.0%
AAGAGCAGGGTCGATGCTAT+TGG + chr1_3:47687318-47687337 None:intergenic 50.0%
!! ATAGCATCGACCCTGCTCTT+CGG - chr1_3:47687318-47687337 Msa0121630:CDS 50.0%
TTCCAAACCTCCGAAGAGCA+GGG + chr1_3:47687331-47687350 None:intergenic 50.0%
ACTGTTTCACGGAGAGCAGA+AGG + chr1_3:47687735-47687754 None:intergenic 50.0%
! TTGAAGTGCCCAATTGCAGC+TGG - chr1_3:47687861-47687880 Msa0121630:CDS 50.0%
! TGAAGTGCCCAATTGCAGCT+GGG - chr1_3:47687862-47687881 Msa0121630:CDS 50.0%
TGCAGCTGGGAAGATATTGG+TGG - chr1_3:47687875-47687894 Msa0121630:CDS 50.0%
TGTTAAGCGAGAACTCCAGG+AGG - chr1_3:47687907-47687926 Msa0121630:intron 50.0%
CAAGAGCTTGAGTTACCTCC+TGG + chr1_3:47687925-47687944 None:intergenic 50.0%
GTTCTGTTCTATGGTCCTCC+TGG - chr1_3:47688078-47688097 Msa0121630:intron 50.0%
TTCTATGGTCCTCCTGGTTG+TGG - chr1_3:47688084-47688103 Msa0121630:intron 50.0%
! AGGGTTTTACCACAACCAGG+AGG + chr1_3:47688096-47688115 None:intergenic 50.0%
!! GGCAATAGCTTTGGCCAAGA+GGG + chr1_3:47688115-47688134 None:intergenic 50.0%
!! TGGCAATAGCTTTGGCCAAG+AGG + chr1_3:47688116-47688135 None:intergenic 50.0%
GTGTGCCTTATCTTGCAGAG+AGG - chr1_3:47688473-47688492 Msa0121630:intron 50.0%
GGTAGTAGTTCAGGAGATGC+TGG - chr1_3:47688494-47688513 Msa0121630:intron 50.0%
AGTAGTTCAGGAGATGCTGG+TGG - chr1_3:47688497-47688516 Msa0121630:intron 50.0%
TTATATCCCCCTTCCAGACG+AGG - chr1_3:47688664-47688683 Msa0121630:intron 50.0%
GCTCTTGCCAAGTACACTCA+AGG - chr1_3:47688755-47688774 Msa0121630:intron 50.0%
GTCCTGCCACAGAGAAGTTA+GGG + chr1_3:47688961-47688980 None:intergenic 50.0%
TGTCCTGCCACAGAGAAGTT+AGG + chr1_3:47688962-47688981 None:intergenic 50.0%
GGCAGGACATTGAGAGAGAA+AGG - chr1_3:47688973-47688992 Msa0121630:CDS 50.0%
GCAAAGTTTGGGCAAAGGCT+TGG + chr1_3:47689133-47689152 None:intergenic 50.0%
CTGCTGCAAAGTTTGGGCAA+AGG + chr1_3:47689138-47689157 None:intergenic 50.0%
TTGCAGCAGTCAAGAGGGTT+TGG - chr1_3:47689149-47689168 Msa0121630:intron 50.0%
AGATTTGCCGACAACAGTGC+TGG - chr1_3:47689182-47689201 Msa0121630:intron 50.0%
CTTGCAGTTGCAAAAGGGTC+AGG + chr1_3:47689232-47689251 None:intergenic 50.0%
CCAGCACTTGCAGTTGCAAA+AGG + chr1_3:47689238-47689257 None:intergenic 50.0%
! CCTTTTGCAACTGCAAGTGC+TGG - chr1_3:47689235-47689254 Msa0121630:CDS 50.0%
!! TTTGCAACTGCAAGTGCTGG+CGG - chr1_3:47689238-47689257 Msa0121630:CDS 50.0%
CTGGGACCATATATGGTCAC+GGG - chr1_3:47689472-47689491 Msa0121630:intron 50.0%
! AGCCTCGTCTAGGGCTTGTT+TGG + chr1_3:47686263-47686282 None:intergenic 55.0%
TTCTCATCCCCCCTCTCACA+AGG + chr1_3:47686728-47686747 None:intergenic 55.0%
GGCTCAGATTCGGGAATTGG+TGG - chr1_3:47686905-47686924 Msa0121630:CDS 55.0%
TTGTATGGACCCCCTGGATC+TGG - chr1_3:47686993-47687012 Msa0121630:CDS 55.0%
TTCCCAGCTCTTGACCCTCA+TGG - chr1_3:47687241-47687260 Msa0121630:CDS 55.0%
CATCCATGAGGGTCAAGAGC+TGG + chr1_3:47687247-47687266 None:intergenic 55.0%
CAGCTCTTGACCCTCATGGA+TGG - chr1_3:47687245-47687264 Msa0121630:CDS 55.0%
CTTCCAAACCTCCGAAGAGC+AGG + chr1_3:47687332-47687351 None:intergenic 55.0%
CTGCTCTTCGGAGGTTTGGA+AGG - chr1_3:47687330-47687349 Msa0121630:CDS 55.0%
GTCCCGAGCTACTCACAATG+TGG - chr1_3:47688169-47688188 Msa0121630:intron 55.0%
GTCCAGGTCGTAGTAGAGCA+GGG + chr1_3:47688628-47688647 None:intergenic 55.0%
CTGCTCTACTACGACCTGGA+CGG - chr1_3:47688627-47688646 Msa0121630:intron 55.0%
ATCAACTGATCCAGCCGTCC+AGG + chr1_3:47688644-47688663 None:intergenic 55.0%
TCGGGAATCCTCGTCTGGAA+GGG + chr1_3:47688675-47688694 None:intergenic 55.0%
TGATGTCGGGAATCCTCGTC+TGG + chr1_3:47688680-47688699 None:intergenic 55.0%
TAGCATACTTGCAAGCGCGC+TGG + chr1_3:47688811-47688830 None:intergenic 55.0%
CTCCCTAACTTCTCTGTGGC+AGG - chr1_3:47688956-47688975 Msa0121630:CDS 55.0%
! TTTGCCGACAACAGTGCTGG+TGG - chr1_3:47689185-47689204 Msa0121630:intron 55.0%
AGTGCCACCAGCACTGTTGT+CGG + chr1_3:47689192-47689211 None:intergenic 55.0%
GAGAGGGGGGATGAGAAGTG+TGG - chr1_3:47686731-47686750 Msa0121630:intron 60.0%
GACCCTGCTCTTCGGAGGTT+TGG - chr1_3:47687326-47687345 Msa0121630:CDS 60.0%
!! ATGCTGGTGGTGCTGCTGAC+AGG - chr1_3:47688510-47688529 Msa0121630:intron 60.0%
!! TGCTGGTGGTGCTGCTGACA+GGG - chr1_3:47688511-47688530 Msa0121630:intron 60.0%
GACCCTGCTCTACTACGACC+TGG - chr1_3:47688623-47688642 Msa0121630:intron 60.0%
CGTCCAGGTCGTAGTAGAGC+AGG + chr1_3:47688629-47688648 None:intergenic 60.0%
TCTACTACGACCTGGACGGC+TGG - chr1_3:47688631-47688650 Msa0121630:intron 60.0%
GGGAATCCTCGTCTGGAAGG+GGG + chr1_3:47688673-47688692 None:intergenic 60.0%
CGGGAATCCTCGTCTGGAAG+GGG + chr1_3:47688674-47688693 None:intergenic 60.0%
GTCGGGAATCCTCGTCTGGA+AGG + chr1_3:47688676-47688695 None:intergenic 60.0%
! GCATCGACCCTGCTCTTCGG+AGG - chr1_3:47687321-47687340 Msa0121630:CDS 65.0%
AAGGGTCAGGGCAGCTGCAG+CGG + chr1_3:47689219-47689238 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 47684946 47689653 47684946 ID=Msa0121630;Name=Msa0121630
chr1_3 mRNA 47684946 47689653 47684946 ID=Msa0121630-mRNA-1;Parent=Msa0121630;Name=Msa0121630-mRNA-1;_AED=0.07;_eAED=0.07;_QI=129|0.87|0.88|1|1|1|9|319|794
chr1_3 exon 47684946 47685621 47684946 ID=Msa0121630-mRNA-1:exon:14366;Parent=Msa0121630-mRNA-1
chr1_3 exon 47685749 47686108 47685749 ID=Msa0121630-mRNA-1:exon:14365;Parent=Msa0121630-mRNA-1
chr1_3 exon 47686306 47686587 47686306 ID=Msa0121630-mRNA-1:exon:14364;Parent=Msa0121630-mRNA-1
chr1_3 exon 47686671 47686742 47686671 ID=Msa0121630-mRNA-1:exon:14363;Parent=Msa0121630-mRNA-1
chr1_3 exon 47686847 47687068 47686847 ID=Msa0121630-mRNA-1:exon:14362;Parent=Msa0121630-mRNA-1
chr1_3 exon 47687154 47687920 47687154 ID=Msa0121630-mRNA-1:exon:14361;Parent=Msa0121630-mRNA-1
chr1_3 exon 47688872 47689001 47688872 ID=Msa0121630-mRNA-1:exon:14360;Parent=Msa0121630-mRNA-1
chr1_3 exon 47689229 47689394 47689229 ID=Msa0121630-mRNA-1:exon:14359;Parent=Msa0121630-mRNA-1
chr1_3 exon 47689496 47689653 47689496 ID=Msa0121630-mRNA-1:exon:14358;Parent=Msa0121630-mRNA-1
chr1_3 five_prime_UTR 47689525 47689653 47689525 ID=Msa0121630-mRNA-1:five_prime_utr;Parent=Msa0121630-mRNA-1
chr1_3 CDS 47689496 47689524 47689496 ID=Msa0121630-mRNA-1:cds;Parent=Msa0121630-mRNA-1
chr1_3 CDS 47689229 47689394 47689229 ID=Msa0121630-mRNA-1:cds;Parent=Msa0121630-mRNA-1
chr1_3 CDS 47688872 47689001 47688872 ID=Msa0121630-mRNA-1:cds;Parent=Msa0121630-mRNA-1
chr1_3 CDS 47687154 47687920 47687154 ID=Msa0121630-mRNA-1:cds;Parent=Msa0121630-mRNA-1
chr1_3 CDS 47686847 47687068 47686847 ID=Msa0121630-mRNA-1:cds;Parent=Msa0121630-mRNA-1
chr1_3 CDS 47686671 47686742 47686671 ID=Msa0121630-mRNA-1:cds;Parent=Msa0121630-mRNA-1
chr1_3 CDS 47686306 47686587 47686306 ID=Msa0121630-mRNA-1:cds;Parent=Msa0121630-mRNA-1
chr1_3 CDS 47685749 47686108 47685749 ID=Msa0121630-mRNA-1:cds;Parent=Msa0121630-mRNA-1
chr1_3 CDS 47685265 47685621 47685265 ID=Msa0121630-mRNA-1:cds;Parent=Msa0121630-mRNA-1
chr1_3 three_prime_UTR 47684946 47685264 47684946 ID=Msa0121630-mRNA-1:three_prime_utr;Parent=Msa0121630-mRNA-1
Gene Sequence

>Msa0121630

ATGGCTAACCAACCTGAATCCTCCGATTCTAAGGGAACGAAGCGCGATTTCAGTACGGCGATTCTGGAACGCAAAAAGTCACCGAACCGTCTCGTCGTTGATGAAGCTGTCAACGATGACAACTCAGTTGTCGCACTTCATCCTGAAACCATGGAGAAACTTCAACTCTTTCGCGGTGATACAATTCTGATCAAGGTTAGACTTGGTGATGTTGTTTCTGTTCATCAATGTCCTGATGTCAAATATGGAAAGCGAGTTCATATTCTTCCTGTGGATGATACTATTGAAGGGGTTACTGGGAATCTCTTTGATGCTTACTTAAAACCTTATTTCCTCGAGGCATATCGTCCAGTTAGGAAGGGAGATATGTTCCTTGTGAGAGGGGGGATGAGAAGTGTGGAATTCAAGGTTATCGAGTGTGACCCTGCTGAGTATTGTGTTGTTGCACCTGACACTGAGATTTTCTGTGAAGGAGAGCCTGTTAAAAGGGAAGATGAGGATCGTTTAGATGAGGTTGGTTATGATGATGTTGGTGGTGTTAGAAAGCAGATGGCTCAGATTCGGGAATTGGTGGAACTGCCTTTGAGGCATCCACAATTATTCAAGTCTATTGGTGTGAAGCCACCAAAAGGGATTTTGTTGTATGGACCCCCTGGATCTGGTAAGACTTTAATTGCACGAGCTGTTGCAAATGAAACTGGTGCTTTCTTTTTCTGTATCAATGGTCCTGAGATCATGTCAAAGCTGGCTGGTGAGAGTGAAAGTAATCTGAGGAAGGCATTCGAAGAAGCTGAGAAGAATGCACCCTCAATCATCTTCATTGATGAGATAGACTCCATTGCTCCAAAGAGGGAGAAGACTAATGGTGAAGTTGAGCGAAGAATTGTTTCCCAGCTCTTGACCCTCATGGATGGGCTTAAATCCCGTGCGCATGTAATTGTTATGGGAGCAACAAATCGTCCCAATAGCATCGACCCTGCTCTTCGGAGGTTTGGAAGGTTTGATCGGGAGATTGATATTGGTGTACCAGATGAAGTTGGACGTCTTGAGGTTCTCCGCATCCATACAAAAAATATGAAGCTTGCAGAAGATGTTGATTTAGAAAAGATTGCTAAGGAAACCCATGGTTATGTTGGTGCTGATTTAGCTGCTTTGTGTACTGAAGCTGCACTTCAGTGCATCAGAGAGAAAATGGATGTGATTGACCTAGAAGATGAAACCATTGATGCTGAGATACTTAACTCAATGGCGGTCACAAATGAACATTTCAGTACCGCACTTGGATCAAGCAATCCTTCTGCTCTCCGTGAAACAGTTGTTGAAGTGCCCAATTGCAGCTGGGAAGATATTGGTGGTCTTGAAAATGTTAAGCGAGAACTCCAGGAGACTGTTCAATATCCAGTGGAACACCCTGAGAAATTTGAGAAGTTTGGAATGTCACCTTCAAAGGGGGTTCTGTTCTATGGTCCTCCTGGTTGTGGTAAAACCCTCTTGGCCAAAGCTATTGCCAATGAATGTCAAGCAAACTTCATTAGTATCAAAGGTCCCGAGCTACTCACAATGTGGTTTGGAGAAAGTGAGGCTAATGTGAGGGAAATTTTTGACAAAGCTCGTGGTTCTGCTCCATGTGTTCTTTTCTTTGATGAACTTGATTCTATTGCAACTCAGAGAGGTAGTAGTTCAGGAGATGCTGGTGGTGCTGCTGACAGGGTTTTGAATCAACTGCTTACAGAAATGGACGGAATGTCGGCAAAGAAAACTGTGTTTATCATTGGGGCCACTAATCGACCTGACATTATAGACCCTGCTCTACTACGACCTGGACGGCTGGATCAGTTGATTTATATCCCCCTTCCAGACGAGGATTCCCGACATCAGATATTCAAAGCTGCCTTGAGAAAATCCCCCATTGCAAAGGATGTTGACATCAGAGCTCTTGCCAAGTACACTCAAGGCTTCAGTGGTGCTGATATTACTGAGATTTGCCAGCGCGCTTGCAAGTATGCTATAAGAGAAAACATCGAGAAGGACATTGAGAGAGAAAGGAGGAGAAGCGATAATCCTGAAGCTATGGAAGAGGATAATGAAGACGATGAGGTAGCTGAAATCAAAGCAGCACATTTTGAAGAATCGATGAAGTATGCACGAAGAAGTGTTAGTGACGCTGACATTCGCAAGTACCAAGCCTTTGCCCAAACTTTGCAGCAGTCAAGAGGGTTTGGATCTGAATTCAGATTTGCCGACAACAGTGCTGGTGGCACTACTGCCGCTGCAGCTGCCCTGACCCTTTTGCAACTGCAAGTGCTGGCGGAGCTGATGAAGATGACCTCTACAGTTAGGTCTACAGTTTGCTGTCTTTTATTTTGGAACTACAATGCTGCCTAA
Protein sequence

>Msa0121630

MANQPESSDSKGTKRDFSTAILERKKSPNRLVVDEAVNDDNSVVALHPETMEKLQLFRGDTILIKVRLGDVVSVHQCPDVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDMFLVRGGMRSVEFKVIECDPAEYCVVAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKIAKETHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFSTALGSSNPSALRETVVEVPNCSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKAALRKSPIAKDVDIRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSDNPEAMEEDNEDDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFADNSAGGTTAAAAALTLLQLQVLAELMKMTSTVRSTVCCLLFWNYNAA*