AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0074790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074790 MtrunA17_Chr1g0182801 96.260 1444 45 3 1 1440 1 1439 0.0 2847
Msa0074790 MtrunA17_Chr7g0262651 79.367 1454 281 8 1 1440 1 1449 0.0 2268
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074790 AT2G20190.1 70.345 1450 404 12 1 1437 1 1437 0.0 1962

Find 329 sgRNAs with CRISPR-Local

Find 933 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCGAGGGGTGCGCTGTTTA+AGG 0.136096 1_2:+49721474 None:intergenic
CAATTACCTTCACTCGTTAT+TGG 0.158735 1_2:-49722074 Msa0074790:CDS
TCAGCTGATCGTTGTATTTC+TGG 0.168372 1_2:+49724694 None:intergenic
CCTGCATTGTTTGAAGCTTT+TGG 0.168454 1_2:-49718062 Msa0074790:CDS
CATTACATTGGGAGATATTT+TGG 0.178641 1_2:-49721326 Msa0074790:CDS
AATCTTTGGAAGCTTGAATT+TGG 0.180104 1_2:+49722515 None:intergenic
GAAATCATTCTTGCCATATT+TGG 0.183609 1_2:-49717467 Msa0074790:CDS
ATTCATTGCATGCTTGTTAA+AGG 0.217319 1_2:+49721694 None:intergenic
CGATAACTTGCCAGAATCTT+TGG 0.223624 1_2:+49722501 None:intergenic
CCAGGTGACTCTGTTGTTAA+AGG 0.224371 1_2:+49722598 None:intergenic
TCATTACCTTCTCAAAATTC+TGG 0.244866 1_2:+49722020 None:intergenic
TTTATAAAGATGGAAACTTT+AGG 0.249342 1_2:-49722312 Msa0074790:CDS
TTTCATCATACACAAGTAAA+AGG 0.251237 1_2:-49722441 Msa0074790:CDS
TTATAAAGATGGAAACTTTA+GGG 0.265582 1_2:-49722311 Msa0074790:CDS
CCATTTGAAGACTGAGCTTT+TGG 0.272500 1_2:+49728897 None:intergenic
GCTTGCCTAACAAGCTCTTT+GGG 0.276677 1_2:+49721848 None:intergenic
ATATTGGCATCCTAAAATTA+TGG 0.280769 1_2:-49721655 Msa0074790:CDS
CCACGACCTCCCTTCTTCTT+TGG 0.284767 1_2:-49729123 Msa0074790:intron
CTGCTTAGTCCTTCCAAATA+TGG 0.292046 1_2:+49717454 None:intergenic
AATAGTGGCCTCTGAAAATT+AGG 0.293085 1_2:+49722268 None:intergenic
GAGAATCGAACGTCTTGTTT+TGG 0.297893 1_2:-49727679 Msa0074790:CDS
TAGGAATCTGCGTTTGGATT+AGG 0.300719 1_2:-49731388 Msa0074790:CDS
ATTCAAGCTTCCAAAGATTC+TGG 0.302569 1_2:-49722511 Msa0074790:CDS
CTTTAATCAGGTTCGAATCT+TGG 0.304662 1_2:+49721264 None:intergenic
TTTCCATCGATTGAATTATA+TGG 0.304710 1_2:-49717114 Msa0074790:three_prime_UTR
AACAACAGAGTCACCTGGTT+TGG 0.311199 1_2:-49722593 Msa0074790:CDS
TGCTTGCCTAACAAGCTCTT+TGG 0.311833 1_2:+49721847 None:intergenic
CCATCTGATGTGGATGTTAA+TGG 0.315828 1_2:-49721047 Msa0074790:CDS
CCGGAAGGTGCTGCAAATAT+TGG 0.317521 1_2:-49721671 Msa0074790:CDS
CAGAAATTCTAGTTTATCAT+TGG 0.319104 1_2:-49723025 Msa0074790:CDS
CAAATCTGACACTCATCTTA+AGG 0.323423 1_2:+49717196 None:intergenic
CCAATATTTGCAGCACCTTC+CGG 0.328268 1_2:+49721671 None:intergenic
TCAGATAGTTGTGTGCTTAA+TGG 0.334263 1_2:+49726727 None:intergenic
TGCTCTGCGATCTTCAAGTT+TGG 0.338940 1_2:-49722842 Msa0074790:CDS
GCTCTTTCAACAATTATTGT+AGG 0.339564 1_2:+49729833 None:intergenic
ACACATACCCTCTGAATAGA+AGG 0.341103 1_2:+49723261 None:intergenic
GTAGCTGCACGCGTGTCTTC+TGG 0.345331 1_2:-49722235 Msa0074790:CDS
AAGGTCTCCAAAGGCTAAAT+TGG 0.346396 1_2:-49721741 Msa0074790:CDS
ATAACAGCCAATTTAGCCTT+TGG 0.347639 1_2:+49721734 None:intergenic
CAATGTGGATAGGCAGTATA+TGG 0.349075 1_2:-49722341 Msa0074790:CDS
CCGGCGGTTGTTGATCGGTT+GGG 0.351427 1_2:-49731730 Msa0074790:CDS
CTTAAGATGAGTGTCAGATT+TGG 0.353026 1_2:-49717195 Msa0074790:three_prime_UTR
CGGCGGTTGTTGATCGGTTG+GGG 0.354470 1_2:-49731729 Msa0074790:CDS
TCATTTCAACGCGCTTGTTC+CGG 0.355888 1_2:-49731749 Msa0074790:CDS
GATAGGTTCAATGCCTTTCT+CGG 0.357239 1_2:+49727800 None:intergenic
AAGGGTCAAAGGATGAAAAT+AGG 0.362833 1_2:+49723280 None:intergenic
GATTGTGGGGCGGCTCTCTC+AGG 0.364925 1_2:-49718117 Msa0074790:CDS
GCAAGCATGCTCTACGACTT+TGG 0.365976 1_2:-49721831 Msa0074790:CDS
CGATCTTCAAGTTTGGATCT+AGG 0.366039 1_2:-49722835 Msa0074790:intron
GCTATTGAGAGCATGCTTAG+AGG 0.366124 1_2:-49722895 Msa0074790:CDS
TTCTCCGAATACACCTTGAT+AGG 0.368292 1_2:+49727783 None:intergenic
CTGAAACAGCAGCAGGGAAT+GGG 0.372574 1_2:+49722641 None:intergenic
CAGGTTCTGACTGGTCTGCC+AGG 0.372994 1_2:-49722108 Msa0074790:CDS
ATCTTTGGAAGCTTGAATTT+GGG 0.374481 1_2:+49722516 None:intergenic
GACAGTGTAAGCAAGATCTT+TGG 0.376905 1_2:+49721148 None:intergenic
CGTTGTATTTCTGGTGCATC+AGG 0.379467 1_2:+49724703 None:intergenic
AAGGTCTACCATTGTGAAAC+AGG 0.380415 1_2:-49726701 Msa0074790:intron
GCTTCAACTCCTAATCTATC+TGG 0.380863 1_2:-49723078 Msa0074790:CDS
TGCACAAAATAGCTGCTTCC+CGG 0.381583 1_2:+49729555 None:intergenic
TTCACTGGGTAGTACATTTG+TGG 0.382804 1_2:-49717342 Msa0074790:three_prime_UTR
TTTAATCAGGTTCGAATCTT+GGG 0.384132 1_2:+49721265 None:intergenic
ACAACAGAGTCACCTGGTTT+GGG 0.384351 1_2:-49722592 Msa0074790:CDS
TTGACCCCAAAGAGCTTGTT+AGG 0.386531 1_2:-49721853 Msa0074790:CDS
TATTCCTCAAATTCTTCATA+TGG 0.389611 1_2:-49720904 Msa0074790:intron
GATTCAATGGATCAAAACTT+TGG 0.390826 1_2:-49721125 Msa0074790:CDS
TATGATAAGGTGTTGTGTTT+CGG 0.391872 1_2:-49724659 Msa0074790:CDS
ACTCCTAATCTATCTGGTTA+TGG 0.395465 1_2:-49723072 Msa0074790:CDS
GCTACGTTCTTTCTTAATAG+TGG 0.396267 1_2:+49722253 None:intergenic
AGAAATTCTAGTTTATCATT+GGG 0.396679 1_2:-49723024 Msa0074790:CDS
GGCCACGACTGGCTTTAATC+AGG 0.397528 1_2:+49721252 None:intergenic
TGAACCTATCAAGGTGTATT+CGG 0.397599 1_2:-49727787 Msa0074790:CDS
TGTAACCTTCAAATGGCTTT+CGG 0.397798 1_2:+49721912 None:intergenic
CAGGTGACTCTGTTGTTAAA+GGG 0.398746 1_2:+49722599 None:intergenic
GACGCAAAGGAACGCATGGC+AGG 0.402496 1_2:-49731949 Msa0074790:CDS
CGAAGCTGGTTGGCCACGAC+TGG 0.405171 1_2:+49721241 None:intergenic
TGAGAGCATGCTTAGAGGCT+TGG 0.407222 1_2:-49722890 Msa0074790:CDS
TGCTTACACTGTCGATTCAA+TGG 0.407718 1_2:-49721138 Msa0074790:CDS
CAGTCGTGGCCAACCAGCTT+CGG 0.411534 1_2:-49721240 Msa0074790:CDS
CTCTACGACTTTGGAGGCTG+TGG 0.412649 1_2:-49721822 Msa0074790:CDS
CTGAGTGAAGGACTTAGTTC+AGG 0.413185 1_2:-49722127 Msa0074790:CDS
GACCGTTGTGCTTGAGGTGC+TGG 0.414056 1_2:-49719436 Msa0074790:CDS
TCAGGTCATTATCCCTCTAC+TGG 0.414745 1_2:-49718875 Msa0074790:intron
TTCTAGAAGCTTCTAGAACT+TGG 0.416007 1_2:+49731911 None:intergenic
TCCGGCGGTTGTTGATCGGT+TGG 0.417340 1_2:-49731731 Msa0074790:CDS
ATATACTGCCTATCCACATT+GGG 0.421255 1_2:+49722343 None:intergenic
GTGGATATTTATATCATGCT+TGG 0.422318 1_2:-49717490 Msa0074790:CDS
ATCACTCGTCGATTGTTGCT+TGG 0.422433 1_2:-49731863 Msa0074790:CDS
GACACTCATCTTAAGGGAAA+AGG 0.423028 1_2:+49717203 None:intergenic
TTGAACATTACCAAAGAAGA+AGG 0.423104 1_2:+49729113 None:intergenic
TTGCATAAATTGCTTGACTA+AGG 0.423762 1_2:-49718824 Msa0074790:intron
AAATCTGACACTCATCTTAA+GGG 0.425672 1_2:+49717197 None:intergenic
TTGTTGCTTGGATCTCTTGA+AGG 0.426169 1_2:-49731851 Msa0074790:CDS
ATAGTGATGGTGGCAGGAAA+TGG 0.426224 1_2:-49721292 Msa0074790:CDS
GATAGTAGCATGAACTTTGA+AGG 0.429549 1_2:-49721074 Msa0074790:CDS
AGAATCTAGGAATCTGCGTT+TGG 0.429670 1_2:-49731394 Msa0074790:intron
GGAGTGTTGGCGGTGGAATA+CGG 0.429917 1_2:-49717174 Msa0074790:three_prime_UTR
TGCTTCCCGGACAGCAGGAT+TGG 0.438372 1_2:+49729568 None:intergenic
GCAGGGTGCGCTTCAAGCAT+TGG 0.440195 1_2:-49731809 Msa0074790:CDS
GCGATCCCAATCCTGCTGTC+CGG 0.441584 1_2:-49729574 Msa0074790:CDS
CGTTCCATGTAACCTTCAAA+TGG 0.441625 1_2:+49721905 None:intergenic
ATGGATGCTCTTTATAAAGA+TGG 0.442350 1_2:-49722322 Msa0074790:CDS
GTGAACTAATGGGGCTAACT+TGG 0.442786 1_2:+49721628 None:intergenic
GTTATTGGAGCAAGGTCAAA+AGG 0.443541 1_2:-49722059 Msa0074790:CDS
TACTGAACTACCCCTTCAAC+GGG 0.443723 1_2:-49729723 Msa0074790:CDS
CTCACCATATGAAGAATTTG+AGG 0.444451 1_2:+49720900 None:intergenic
GCGAGGGGTGCGCTGTTTAA+GGG 0.444570 1_2:+49721475 None:intergenic
GGAGTCCTAAAACAGCTTGT+TGG 0.445362 1_2:-49726751 Msa0074790:CDS
TGGATATTTATATCATGCTT+GGG 0.448346 1_2:-49717489 Msa0074790:CDS
ATTATTTCCCTTCAGATTGT+GGG 0.452006 1_2:-49718131 Msa0074790:intron
CGATCCCAATCCTGCTGTCC+GGG 0.452338 1_2:-49729573 Msa0074790:CDS
AGGGGTGGTCAGATGATTAG+AGG 0.454155 1_2:+49722618 None:intergenic
AGAAAGATGTTCAAAGCCTT+CGG 0.454499 1_2:+49720995 None:intergenic
TCACTGGGTAGTACATTTGT+GGG 0.454814 1_2:-49717341 Msa0074790:three_prime_UTR
GAAGGTGATGTCACCGAGAA+AGG 0.454990 1_2:-49727813 Msa0074790:CDS
GCTGAAACAGCAGCAGGGAA+TGG 0.455146 1_2:+49722640 None:intergenic
CAGTATCCGGAACGGTGGTA+TGG 0.458057 1_2:-49722557 Msa0074790:CDS
TACATTATCAGATGGATCAT+AGG 0.458373 1_2:+49721394 None:intergenic
ATCTCTAGTGGTTATATCAC+TGG 0.460232 1_2:-49728873 Msa0074790:CDS
GGCTTTCAAGCTGACCGACT+TGG 0.461172 1_2:-49721104 Msa0074790:CDS
ATTCGGAGAAGGAATTCATC+AGG 0.461731 1_2:-49727770 Msa0074790:CDS
CTAGAAAAGCACATTACATT+GGG 0.462034 1_2:-49721337 Msa0074790:CDS
ATTAGGAGTTGAAGCTTGAC+TGG 0.465486 1_2:+49723086 None:intergenic
GCTTCCCGGACAGCAGGATT+GGG 0.465684 1_2:+49729569 None:intergenic
ACATGCCGAAAGCCATTTGA+AGG 0.466049 1_2:-49721917 Msa0074790:CDS
TTGTTCCGGCGGTTGTTGAT+CGG 0.466426 1_2:-49731735 Msa0074790:CDS
GTTCCATAACCAGATAGATT+AGG 0.467252 1_2:+49723069 None:intergenic
ACACTCATCTTAAGGGAAAA+GGG 0.467677 1_2:+49717204 None:intergenic
TGATGCTGCTATCGATTAGC+AGG 0.471701 1_2:-49717365 Msa0074790:exon
TTGGGGACTTCTATCTCCTC+TGG 0.471775 1_2:-49723006 Msa0074790:CDS
CAGGAAATGTATGCACAAGC+TGG 0.472120 1_2:-49729173 Msa0074790:CDS
CTATCGATTAGCAGGTTCAC+TGG 0.474297 1_2:-49717357 Msa0074790:exon
ATCTACCCTTGTACCAGAAA+AGG 0.475316 1_2:-49727730 Msa0074790:CDS
CTTTCACAAGCTAAGTCACT+TGG 0.476687 1_2:-49722976 Msa0074790:CDS
CCAAAAGCTCAGTCTTCAAA+TGG 0.477978 1_2:-49728897 Msa0074790:CDS
GAGGAAGAATAGCCCGTTGA+AGG 0.478849 1_2:+49729711 None:intergenic
TACAATAATTGTTGAAAGAG+CGG 0.480101 1_2:-49729831 Msa0074790:CDS
CCAAAAGCTTCAAACAATGC+AGG 0.481915 1_2:+49718062 None:intergenic
GTGTTGTGTTTCGGACGCAA+TGG 0.482310 1_2:-49724650 Msa0074790:CDS
ACAAACCCATACCACCGTTC+CGG 0.482926 1_2:+49722551 None:intergenic
AAGTTGCTCGTGTGCTTCCT+CGG 0.483255 1_2:-49724881 Msa0074790:CDS
AATTGTGATAGTGATATTGT+TGG 0.484547 1_2:-49721179 Msa0074790:CDS
CGAATCTCACATGCAAGGAC+AGG 0.484968 1_2:-49717397 Msa0074790:CDS
ACAATAATTGTTGAAAGAGC+GGG 0.485190 1_2:-49729830 Msa0074790:CDS
AGGTTCTGACTGGTCTGCCA+GGG 0.485808 1_2:-49722107 Msa0074790:CDS
TCCTCTGAAGAGGGATATGT+TGG 0.487001 1_2:-49721365 Msa0074790:CDS
TCTACACTTAAACATCTGAA+TGG 0.488025 1_2:+49718998 None:intergenic
TTGATGAAAACAGTTACATC+CGG 0.491445 1_2:-49722387 Msa0074790:CDS
CCTGGTTTGGGCGTCAATAG+AGG 0.492622 1_2:-49722580 Msa0074790:CDS
TCTGAGATAAAACAATTGTC+AGG 0.493217 1_2:+49719026 None:intergenic
GATGATAGTCACTTATCTGT+TGG 0.496533 1_2:-49722196 Msa0074790:CDS
TCTAGAAAAGCACATTACAT+TGG 0.496864 1_2:-49721338 Msa0074790:CDS
TCCTCAGTTTCATCCGAAGC+TGG 0.497185 1_2:+49721227 None:intergenic
TAGAAGCTTCTAGAACTTGG+TGG 0.498070 1_2:+49731914 None:intergenic
TAACAAGCATGCAATGAATC+CGG 0.499037 1_2:-49721690 Msa0074790:CDS
TGTTGTGTTTCGGACGCAAT+GGG 0.499272 1_2:-49724649 Msa0074790:CDS
CTTTGACCCTTCTATTCAGA+GGG 0.506049 1_2:-49723268 Msa0074790:intron
TCAAGAGAACGTAGCAATGC+GGG 0.508608 1_2:+49721770 None:intergenic
ATAGCTGCTTCCCGGACAGC+AGG 0.509856 1_2:+49729563 None:intergenic
CATATACTGCCTATCCACAT+TGG 0.511096 1_2:+49722342 None:intergenic
AGGGCTTCATGAAGAGATGC+TGG 0.516401 1_2:+49722148 None:intergenic
CTCTAGATAGTGATGGTGGC+AGG 0.516871 1_2:-49721298 Msa0074790:CDS
TTCTTGGGATTAGCATTCAA+AGG 0.517866 1_2:+49728840 None:intergenic
CAGATTTGGAGTGTTGGCGG+TGG 0.517996 1_2:-49717181 Msa0074790:three_prime_UTR
AAGCAGCACACAATTGAAGT+TGG 0.521937 1_2:-49717437 Msa0074790:CDS
AAGTAAGTGTTTGAGTGATA+AGG 0.522120 1_2:-49731357 Msa0074790:CDS
TCATATACCGCCTAGTCTCC+CGG 0.522524 1_2:+49722368 None:intergenic
TGAAACAGCAGCAGGGAATG+GGG 0.524328 1_2:+49722642 None:intergenic
AACTTCAGCTATTGTTGCAA+TGG 0.524607 1_2:-49723049 Msa0074790:CDS
AATAGGCGACGGGAACGCTC+CGG 0.525889 1_2:+49723297 None:intergenic
GCGTCAATAGAGGCAGTATC+CGG 0.527753 1_2:-49722570 Msa0074790:CDS
TATGATCCATCTGATAATGT+AGG 0.529026 1_2:-49721392 Msa0074790:CDS
CAAGCTAAGTCACTTGGTAA+TGG 0.529158 1_2:-49722970 Msa0074790:CDS
GACTTAGTTCAGGTTCTGAC+TGG 0.529168 1_2:-49722117 Msa0074790:CDS
CGCAAAGGAACGCATGGCAG+GGG 0.530233 1_2:-49731947 Msa0074790:CDS
ATCGATTGAATTATATGGTG+AGG 0.530664 1_2:-49717109 Msa0074790:three_prime_UTR
TATATTAATGCTAGGCTAGA+GGG 0.531374 1_2:-49728927 Msa0074790:CDS
GAAAGGCATTGAACCTATCA+AGG 0.532088 1_2:-49727796 Msa0074790:CDS
AAGAGCAAGCTCTCTGATTG+AGG 0.533744 1_2:+49719401 None:intergenic
CCAAAGAAGAAGGGAGGTCG+TGG 0.534430 1_2:+49729123 None:intergenic
TAACGAGTGAAGGTAATTGA+AGG 0.534963 1_2:+49722078 None:intergenic
CTTCACAATGGAGGAAGCAC+TGG 0.535217 1_2:-49731989 None:intergenic
TGTCTGTGTAGATATGCAGT+GGG 0.535325 1_2:-49720591 Msa0074790:intron
TGTTTCGGACGCAATGGGCG+AGG 0.535955 1_2:-49724644 Msa0074790:intron
TCACCATATAATTCAATCGA+TGG 0.536881 1_2:+49717111 None:intergenic
ACAGTTACATCCGGGAGACT+AGG 0.537409 1_2:-49722378 Msa0074790:CDS
CTACTGAACTACCCCTTCAA+CGG 0.537708 1_2:-49729724 Msa0074790:CDS
AAACAATGCAGGGAGAAATG+AGG 0.537889 1_2:+49718073 None:intergenic
AAAGCCATTTGAAGGTTACA+TGG 0.537923 1_2:-49721909 Msa0074790:CDS
CAAGACGTTCGATTCTCTGC+AGG 0.538026 1_2:+49727685 None:intergenic
CAGTTTCATCCGAAGCTGGT+TGG 0.538545 1_2:+49721231 None:intergenic
TTATCGTATAATAGCAATGT+TGG 0.543314 1_2:-49722484 Msa0074790:CDS
GCTTCCGCCGTTGTTCTCTC+CGG 0.543648 1_2:-49731787 Msa0074790:CDS
AGTATCCGGAACGGTGGTAT+GGG 0.543745 1_2:-49722556 Msa0074790:CDS
TTAGAGGCTGAAACAGCAGC+AGG 0.546251 1_2:+49722634 None:intergenic
TCATTCTTGCCATATTTGGA+AGG 0.546311 1_2:-49717463 Msa0074790:CDS
CCTTTGACCCTTCTATTCAG+AGG 0.546630 1_2:-49723269 Msa0074790:CDS
TGATTGTTAAGAAAATGAAA+AGG 0.547256 1_2:-49717058 Msa0074790:three_prime_UTR
TTGTTTCCAGAAAGATGCCA+TGG 0.550205 1_2:-49719219 Msa0074790:intron
AGGTGAAATATATTAATGCT+AGG 0.553111 1_2:-49728935 Msa0074790:CDS
GCTCTCTCAGGAGGAACTGA+TGG 0.555375 1_2:-49718105 Msa0074790:CDS
GGTGGTTCTCTAGATAGTGA+TGG 0.555418 1_2:-49721305 Msa0074790:CDS
TTAAGTCTACTTCAATGCGA+GGG 0.556968 1_2:+49721459 None:intergenic
GAACATTTAAATATTGCCGA+AGG 0.557366 1_2:-49721011 Msa0074790:CDS
CAAAAGCTTCAAACAATGCA+GGG 0.558776 1_2:+49718063 None:intergenic
GAAGGACGCAAAGGAACGCA+TGG 0.559104 1_2:-49731953 Msa0074790:CDS
CCTCTATTGACGCCCAAACC+AGG 0.559407 1_2:+49722580 None:intergenic
CTTCACTCGTTATTGGAGCA+AGG 0.560390 1_2:-49722067 Msa0074790:CDS
GAGATGTCAAATTATGCAGA+TGG 0.560673 1_2:-49722172 Msa0074790:CDS
TACGTTCTCTTGACGAACAA+AGG 0.561024 1_2:-49721760 Msa0074790:CDS
ACGCAAAGGAACGCATGGCA+GGG 0.562340 1_2:-49731948 Msa0074790:CDS
GGAAGAATAGCCCGTTGAAG+GGG 0.562874 1_2:+49729713 None:intergenic
AAGAAGATGGAGGCAAACAT+AGG 0.564426 1_2:-49723158 Msa0074790:CDS
TGAACATTACCAAAGAAGAA+GGG 0.565471 1_2:+49729114 None:intergenic
AAAGGCTAAAAGTTCATCAA+AGG 0.565933 1_2:-49728808 Msa0074790:CDS
CCTTTAACAACAGAGTCACC+TGG 0.567160 1_2:-49722598 Msa0074790:CDS
AACGTAGCAATGCGGGCAAG+AGG 0.567385 1_2:+49721777 None:intergenic
GATATTGACCGTTGTGCTTG+AGG 0.569910 1_2:-49719442 Msa0074790:CDS
TGAAGGTTTGCCATCTGATG+TGG 0.570068 1_2:-49721057 Msa0074790:CDS
GAAATTCTAGTTTATCATTG+GGG 0.570123 1_2:-49723023 Msa0074790:CDS
AACAATGCAGGGAGAAATGA+GGG 0.571549 1_2:+49718074 None:intergenic
TTTCAACGCGCTTGTTCCGG+CGG 0.572413 1_2:-49731746 Msa0074790:CDS
TGTCAGATTTGGAGTGTTGG+CGG 0.574517 1_2:-49717184 Msa0074790:three_prime_UTR
ATATGAACCCCAATGTGGAT+AGG 0.575880 1_2:-49722351 Msa0074790:CDS
AGATGGATCATAGGAAGACT+TGG 0.576367 1_2:+49721403 None:intergenic
ACTTATACGAGGATATGATA+AGG 0.576524 1_2:-49724672 Msa0074790:CDS
CCCTTGTACCAGAAAAGGAC+TGG 0.576763 1_2:-49727725 Msa0074790:CDS
GCGTGTCTTCTGGTAGAAGA+AGG 0.577836 1_2:-49722225 Msa0074790:CDS
TATCAAGGTGTATTCGGAGA+AGG 0.578869 1_2:-49727781 Msa0074790:CDS
CCATTAACATCCACATCAGA+TGG 0.579257 1_2:+49721047 None:intergenic
CCTCTGAATAGAAGGGTCAA+AGG 0.579355 1_2:+49723269 None:intergenic
CAGTTAATAAATGAAGAAGA+TGG 0.579873 1_2:-49723171 Msa0074790:CDS
AGGAAGAATAGCCCGTTGAA+GGG 0.580099 1_2:+49729712 None:intergenic
ACGAATAATATCTGCAAGTG+TGG 0.583341 1_2:+49721940 None:intergenic
GTAATTGAAGGCAGAAACCC+TGG 0.586113 1_2:+49722090 None:intergenic
GATGTTCCTACATTATCAGA+TGG 0.586366 1_2:+49721386 None:intergenic
CTTCATGAAGCCCTGAGTGA+AGG 0.589143 1_2:-49722139 Msa0074790:CDS
GTAGGAACATCCTCTGAAGA+GGG 0.591027 1_2:-49721374 Msa0074790:CDS
CGAACCGTGACATCTGCAAT+CGG 0.591091 1_2:-49729758 Msa0074790:CDS
TGTAGGAACATCCTCTGAAG+AGG 0.591159 1_2:-49721375 Msa0074790:CDS
TTGTCTGTGTAGATATGCAG+TGG 0.591301 1_2:-49720592 Msa0074790:intron
TCGTCCTCGGTAACCAGTAG+AGG 0.591666 1_2:+49718862 None:intergenic
TCTTCAAATGGTATCTCTAG+TGG 0.591900 1_2:-49728885 Msa0074790:CDS
ATGAAGCTTAAAATGATCGC+CGG 0.593923 1_2:+49731768 None:intergenic
AAAGGATGAAAATAGGCGAC+GGG 0.594792 1_2:+49723287 None:intergenic
AAAGCTGCTTAATGTTACAA+AGG 0.594817 1_2:-49719171 Msa0074790:CDS
GGCGGTTGTTGATCGGTTGG+GGG 0.595732 1_2:-49731728 Msa0074790:CDS
TATCGATTAGCAGGTTCACT+GGG 0.595842 1_2:-49717356 Msa0074790:exon
GGGGATCACGAGATGAGGGA+GGG 0.596624 1_2:+49722662 None:intergenic
TACAAAGGATACTGTTCCCA+AGG 0.597735 1_2:-49719156 Msa0074790:intron
AGGAAATGTATGCACAAGCT+GGG 0.598212 1_2:-49729172 Msa0074790:CDS
CCCAACCGATCAACAACCGC+CGG 0.598778 1_2:+49731730 None:intergenic
TTATTGGAGCAAGGTCAAAA+GGG 0.599354 1_2:-49722058 Msa0074790:CDS
CACATACCCTCTGAATAGAA+GGG 0.599409 1_2:+49723262 None:intergenic
TGAGTCCTGTGTTTGTCATG+TGG 0.600431 1_2:+49720928 None:intergenic
CTTGCCTAACAAGCTCTTTG+GGG 0.601192 1_2:+49721849 None:intergenic
TGTGGGGCGGCTCTCTCAGG+AGG 0.601681 1_2:-49718114 Msa0074790:CDS
TCCCAAGAAAAGTAGTCCAA+AGG 0.602354 1_2:-49728826 Msa0074790:CDS
GAAACAGCAGCAGGGAATGG+GGG 0.602928 1_2:+49722643 None:intergenic
CTGAACTAAGTCCTTCACTC+AGG 0.603325 1_2:+49722128 None:intergenic
ATTAAGTCTACTTCAATGCG+AGG 0.603360 1_2:+49721458 None:intergenic
TTATTTCCCTTCAGATTGTG+GGG 0.604820 1_2:-49718130 Msa0074790:intron
TGGTGCACTTCTATCACGAA+TGG 0.604974 1_2:+49723119 None:intergenic
ATATTAATGCTAGGCTAGAG+GGG 0.610650 1_2:-49728926 Msa0074790:CDS
ACGTAGCAATGCGGGCAAGA+GGG 0.611057 1_2:+49721778 None:intergenic
AGCATGCTCTACGACTTTGG+AGG 0.613842 1_2:-49721828 Msa0074790:CDS
ATATATTAATGCTAGGCTAG+AGG 0.614694 1_2:-49728928 Msa0074790:CDS
CCATCATAAAATCGCACATG+CGG 0.614775 1_2:-49721969 Msa0074790:CDS
AGCACGCGCGAAGGACGCAA+AGG 0.616457 1_2:-49731962 Msa0074790:CDS
AGGTGACTCTGTTGTTAAAG+GGG 0.616970 1_2:+49722600 None:intergenic
CTTGCTCCAATAACGAGTGA+AGG 0.617821 1_2:+49722068 None:intergenic
CCAGAGTGCGGATATTCGTA+AGG 0.618286 1_2:-49718036 Msa0074790:intron
CCTTACGAATATCCGCACTC+TGG 0.619470 1_2:+49718036 None:intergenic
AAGACGTTCGATTCTCTGCA+GGG 0.620290 1_2:+49727686 None:intergenic
CGTCCTCGGTAACCAGTAGA+GGG 0.620937 1_2:+49718863 None:intergenic
CAAAGGATGAAAATAGGCGA+CGG 0.621556 1_2:+49723286 None:intergenic
GATAGGTGCGGTCAACTGCA+AGG 0.621898 1_2:-49723350 Msa0074790:intron
GCACTTCTATCACGAATGGA+AGG 0.625563 1_2:+49723123 None:intergenic
ACTGGAACTAGCACGCGCGA+AGG 0.626221 1_2:-49731971 Msa0074790:CDS
TGACTCTGTTGTTAAAGGGG+TGG 0.631386 1_2:+49722603 None:intergenic
TTCGGAGAAGGAATTCATCA+GGG 0.632832 1_2:-49727769 Msa0074790:CDS
TGATGAAAACAGTTACATCC+GGG 0.633373 1_2:-49722386 Msa0074790:CDS
TGACGAACAAAGGTCTCCAA+AGG 0.635022 1_2:-49721750 Msa0074790:CDS
TCAGTCAGCTGAAGACGTGA+AGG 0.635782 1_2:-49720955 Msa0074790:CDS
TCTACGACTTTGGAGGCTGT+GGG 0.636526 1_2:-49721821 Msa0074790:CDS
GCACACAACTATCTGATCGA+AGG 0.639040 1_2:-49726720 Msa0074790:CDS
TTTGCACAATCAACTATCCG+AGG 0.640328 1_2:+49724864 None:intergenic
AGCTGACCGACTTGGATACG+TGG 0.641471 1_2:-49721096 Msa0074790:CDS
GAGTGTCAGATTTGGAGTGT+TGG 0.641571 1_2:-49717187 Msa0074790:three_prime_UTR
ATCTGCAAAACAAGAAAGAG+CGG 0.643722 1_2:-49721430 Msa0074790:CDS
ACCAGCTTCGGATGAAACTG+AGG 0.644810 1_2:-49721228 Msa0074790:CDS
TGAACTAAGTCCTTCACTCA+GGG 0.645273 1_2:+49722129 None:intergenic
TTAATAAATGAAGAAGATGG+AGG 0.648630 1_2:-49723168 Msa0074790:CDS
ATCGACGAGTGATGAAACTT+CGG 0.648728 1_2:+49731873 None:intergenic
TCTTCAGGTCTCAAACGAAG+CGG 0.650958 1_2:-49719056 Msa0074790:intron
GTCAACCACATGACAAACAC+AGG 0.652740 1_2:-49720933 Msa0074790:CDS
AAGCATGCAATGAATCCGGA+AGG 0.654808 1_2:-49721686 Msa0074790:CDS
TAGACCGATTGCAGATGTCA+CGG 0.654881 1_2:+49729754 None:intergenic
GCAGTGCAATACTTCGTGCA+AGG 0.662397 1_2:-49724833 Msa0074790:intron
CAAATCGAATCTCACATGCA+AGG 0.662437 1_2:-49717402 Msa0074790:CDS
AACCTGATTAAAGCCAGTCG+TGG 0.662903 1_2:-49721254 Msa0074790:CDS
TACTATCCACGTATCCAAGT+CGG 0.664568 1_2:+49721090 None:intergenic
ACCAACATATCCCTCTTCAG+AGG 0.665572 1_2:+49721364 None:intergenic
GGTTCTCTAGATAGTGATGG+TGG 0.666599 1_2:-49721302 Msa0074790:CDS
CAATAATTGTTGAAAGAGCG+GGG 0.667879 1_2:-49729829 Msa0074790:CDS
ACTGCATGCAAGCAAACAGA+AGG 0.668966 1_2:-49722923 Msa0074790:CDS
GTCTGTGTAGATATGCAGTG+GGG 0.669583 1_2:-49720590 Msa0074790:intron
TAAGTCTACTTCAATGCGAG+GGG 0.670383 1_2:+49721460 None:intergenic
TAGAGGCTGAAACAGCAGCA+GGG 0.672931 1_2:+49722635 None:intergenic
GTCAAGAGAACGTAGCAATG+CGG 0.674735 1_2:+49721769 None:intergenic
TCAGAGCACCTGTTTCACAA+TGG 0.675338 1_2:+49726693 None:intergenic
TTGTGAAAGAAGAACACCAG+AGG 0.676556 1_2:+49722990 None:intergenic
TTTCCCTTCAGATTGTGGGG+CGG 0.678558 1_2:-49718127 Msa0074790:intron
ATGCTTCAAAATCACCCAAG+AGG 0.679266 1_2:+49725170 None:intergenic
ATTAAACGAGAAAACACATG+AGG 0.679998 1_2:+49721875 None:intergenic
ATGATCGCCGGAGAGAACAA+CGG 0.680734 1_2:+49731780 None:intergenic
TCTGTGTAGATATGCAGTGG+GGG 0.690750 1_2:-49720589 Msa0074790:intron
GAAGCACTATTTCAAGTAAG+CGG 0.692353 1_2:-49720561 Msa0074790:CDS
TATACTGCCTATCCACATTG+GGG 0.692454 1_2:+49722344 None:intergenic
GCTTGACTGGAAGATGACAT+TGG 0.695289 1_2:+49723099 None:intergenic
ATCCAGCACCTCAAGCACAA+CGG 0.698268 1_2:+49719434 None:intergenic
AGAGGCAGTATCCGGAACGG+TGG 0.699152 1_2:-49722562 Msa0074790:CDS
GCGGTATATGAACCCCAATG+TGG 0.704015 1_2:-49722356 Msa0074790:CDS
AATAGAGGCAGTATCCGGAA+CGG 0.705699 1_2:-49722565 Msa0074790:CDS
ACATTACCAAAGAAGAAGGG+AGG 0.706777 1_2:+49729117 None:intergenic
GTTACATCCGGGAGACTAGG+CGG 0.720518 1_2:-49722375 Msa0074790:CDS
TATCCCTCTACTGGTTACCG+AGG 0.724298 1_2:-49718866 Msa0074790:CDS
ATCGCCGGAGAGAACAACGG+CGG 0.732065 1_2:+49731783 None:intergenic
ACGATCAGCTGACTTATACG+AGG 0.758181 1_2:-49724683 Msa0074790:CDS
TTGCACGAAGTATTGCACTG+CGG 0.851515 1_2:+49724835 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTGTATATGAATATTA+AGG - chr1_2:49719742-49719761 Msa0074790:intron 10.0%
!! ATGATAAGAAATATAATTAT+AGG - chr1_2:49720574-49720593 Msa0074790:CDS 10.0%
!! TGATAAGAAATATAATTATA+GGG - chr1_2:49720575-49720594 Msa0074790:CDS 10.0%
!! TATAAAACTTAAAAAATGTT+TGG + chr1_2:49722107-49722126 None:intergenic 10.0%
!! TATGCTAAAAAAAAATTATT+AGG + chr1_2:49723221-49723240 None:intergenic 10.0%
!!! TTATTTAACAGATAATATTT+TGG + chr1_2:49723261-49723280 None:intergenic 10.0%
!! CGATATTTAATATATTTATA+GGG + chr1_2:49723293-49723312 None:intergenic 10.0%
!! ACGATATTTAATATATTTAT+AGG + chr1_2:49723294-49723313 None:intergenic 10.0%
!!! AATATGAAATTTTAAGTTTT+TGG - chr1_2:49723503-49723522 Msa0074790:intron 10.0%
!!! AAATTTGATATATTTTTAGA+GGG - chr1_2:49723645-49723664 Msa0074790:intron 10.0%
!! AATAAAATAAATATATCGTT+CGG + chr1_2:49725269-49725288 None:intergenic 10.0%
!!! TTATTATTTTCATATATACA+AGG - chr1_2:49725397-49725416 Msa0074790:intron 10.0%
!! ATAGAAATAAAATATATAAC+AGG + chr1_2:49726246-49726265 None:intergenic 10.0%
!!! TAAAAATTTTATTTTGGAAA+AGG + chr1_2:49728676-49728695 None:intergenic 10.0%
!!! CTATTAATTTTTCTATATTT+TGG - chr1_2:49730074-49730093 Msa0074790:intron 10.0%
!!! ATTTATGTTAGAATCAATTT+TGG - chr1_2:49717557-49717576 Msa0074790:intron 15.0%
!!! GATTTCATTTTTAAGATTTT+TGG + chr1_2:49718210-49718229 None:intergenic 15.0%
!! AGTAAATGAAAATTTGAATA+TGG - chr1_2:49718409-49718428 Msa0074790:intron 15.0%
!! GTAAATGAAAATTTGAATAT+GGG - chr1_2:49718410-49718429 Msa0074790:intron 15.0%
!!! ATTTTACGATAAAAGTTTTT+GGG + chr1_2:49718648-49718667 None:intergenic 15.0%
!!! TATTTTACGATAAAAGTTTT+TGG + chr1_2:49718649-49718668 None:intergenic 15.0%
!!! TTGTTACTTATTATTATTGT+AGG - chr1_2:49719176-49719195 Msa0074790:CDS 15.0%
!! AATATTCATATACAATATTG+TGG + chr1_2:49719741-49719760 None:intergenic 15.0%
!! AAAACAAATTATAATGCTAT+TGG + chr1_2:49720378-49720397 None:intergenic 15.0%
!!! TAATACAGAACTTTTTTTAA+AGG + chr1_2:49720766-49720785 None:intergenic 15.0%
!! TAAGTGAAGATTAAAATATT+CGG + chr1_2:49720970-49720989 None:intergenic 15.0%
!! TTCACTTAAATGAAAAATTT+AGG - chr1_2:49720982-49721001 Msa0074790:CDS 15.0%
!! GATAAAGTGATATAATTAAA+AGG - chr1_2:49721023-49721042 Msa0074790:CDS 15.0%
!! AAAAATTAAATGTATGACTT+TGG + chr1_2:49721061-49721080 None:intergenic 15.0%
!!! ATTTGTTAATGTTGAAATTT+GGG + chr1_2:49721926-49721945 None:intergenic 15.0%
!!! TATTTGTTAATGTTGAAATT+TGG + chr1_2:49721927-49721946 None:intergenic 15.0%
!! AATAACAAAAAGAACAAAAA+AGG + chr1_2:49722957-49722976 None:intergenic 15.0%
!!! TTTTGTTCTTTTTGTTATTA+TGG - chr1_2:49722958-49722977 Msa0074790:CDS 15.0%
!!! TTTGTTCTTTTTGTTATTAT+GGG - chr1_2:49722959-49722978 Msa0074790:CDS 15.0%
!!! TATTTTAGAGATATCTTATA+AGG + chr1_2:49723150-49723169 None:intergenic 15.0%
!!! AGATATCTCTAAAATATTTT+CGG - chr1_2:49723154-49723173 Msa0074790:CDS 15.0%
!!! TTATCTGTTAAATAAGTTTT+TGG - chr1_2:49723266-49723285 Msa0074790:intron 15.0%
!!! ATATTTTCTATTAGCATTTT+TGG - chr1_2:49723357-49723376 Msa0074790:intron 15.0%
!!! GAAATTTGATATATTTTTAG+AGG - chr1_2:49723644-49723663 Msa0074790:intron 15.0%
!!! ATCCATGAATATTTTTTATT+TGG - chr1_2:49723798-49723817 Msa0074790:intron 15.0%
!! TACCAAATAAAAAATATTCA+TGG + chr1_2:49723803-49723822 None:intergenic 15.0%
!!! ATTTTCTATGTTGTTTTATA+CGG - chr1_2:49724080-49724099 Msa0074790:intron 15.0%
!!! AATAAAACCATTTTTATTGT+AGG - chr1_2:49724278-49724297 Msa0074790:intron 15.0%
!!! TTTTTTTACCTTTGATTAAA+AGG - chr1_2:49725013-49725032 Msa0074790:CDS 15.0%
!!! TTTTTTACCTTTGATTAAAA+GGG - chr1_2:49725014-49725033 Msa0074790:CDS 15.0%
!!! TTTTTTTTTAATGTTCTTAG+AGG + chr1_2:49728273-49728292 None:intergenic 15.0%
!!! TGCAACTAAAAATTTTATTT+TGG + chr1_2:49728682-49728701 None:intergenic 15.0%
!!! TTTGTCTTGTATTATTTTTT+TGG - chr1_2:49731809-49731828 Msa0074790:CDS 15.0%
!! AACAAATAGATACAATTCAA+AGG + chr1_2:49717401-49717420 None:intergenic 20.0%
!! ACTCATTAGTAAAATTGATT+CGG - chr1_2:49717450-49717469 Msa0074790:CDS 20.0%
!! TCTAACATAAATCCATAAAT+TGG + chr1_2:49717549-49717568 None:intergenic 20.0%
!! ACAATTAAAACATAATGCTA+CGG + chr1_2:49718111-49718130 None:intergenic 20.0%
!! GTATAGGATAAATAGATTTA+GGG - chr1_2:49718351-49718370 Msa0074790:intron 20.0%
!!! GTTTGTTACAATTTTTTATG+TGG - chr1_2:49718792-49718811 Msa0074790:intron 20.0%
!! AAACTTCAAATAATATATGC+CGG + chr1_2:49719532-49719551 None:intergenic 20.0%
!!! ATATTATTTGAAGTTTGAAC+TGG - chr1_2:49719536-49719555 Msa0074790:intron 20.0%
!!! ATTTGCATTTAATCCTTTTT+GGG + chr1_2:49719603-49719622 None:intergenic 20.0%
!! TGTATATGAATATTAAGGAA+TGG - chr1_2:49719747-49719766 Msa0074790:intron 20.0%
!! GTATATGAATATTAAGGAAT+GGG - chr1_2:49719748-49719767 Msa0074790:intron 20.0%
!!! ATTGTGAGATTTTAGATAAA+AGG - chr1_2:49720544-49720563 Msa0074790:CDS 20.0%
!!! AGTTTTAACTTTTGATGATA+AGG - chr1_2:49720808-49720827 Msa0074790:intron 20.0%
!! TTTGTATGATTACCAATTAT+TGG - chr1_2:49720872-49720891 Msa0074790:intron 20.0%
!!! TTACCAATTATTGGAATTTT+AGG - chr1_2:49720881-49720900 Msa0074790:intron 20.0%
!!! TACCAATTATTGGAATTTTA+GGG - chr1_2:49720882-49720901 Msa0074790:intron 20.0%
!! TTTGTTAATGTTGAAATTTG+GGG + chr1_2:49721925-49721944 None:intergenic 20.0%
!! TTCAACATTAACAAATAAAG+AGG - chr1_2:49721930-49721949 Msa0074790:CDS 20.0%
!!! TTTCTTCAATTGTAACATTT+TGG + chr1_2:49722184-49722203 None:intergenic 20.0%
!!! AAAACAACATTTTTTGTTTG+TGG - chr1_2:49722201-49722220 Msa0074790:CDS 20.0%
!!! TTGTTCTTTTTGTTATTATG+GGG - chr1_2:49722960-49722979 Msa0074790:CDS 20.0%
!!! TTTTTAGCATATCTTGAAAA+AGG - chr1_2:49723230-49723249 Msa0074790:intron 20.0%
!! GCTAATAGAAAATATTTGAA+GGG + chr1_2:49723352-49723371 None:intergenic 20.0%
!! TGCTAATAGAAAATATTTGA+AGG + chr1_2:49723353-49723372 None:intergenic 20.0%
!! ACATAATTCAAAATTTGGAA+GGG + chr1_2:49723409-49723428 None:intergenic 20.0%
!! AACATAATTCAAAATTTGGA+AGG + chr1_2:49723410-49723429 None:intergenic 20.0%
!! GCAAAACATAATTCAAAATT+TGG + chr1_2:49723414-49723433 None:intergenic 20.0%
!!! AAAATTCTAAACTTTTGCAA+GGG + chr1_2:49723465-49723484 None:intergenic 20.0%
!!! AAAAATTCTAAACTTTTGCA+AGG + chr1_2:49723466-49723485 None:intergenic 20.0%
!!! CTCAAATGAAAATTTTTAGA+GGG - chr1_2:49723612-49723631 Msa0074790:intron 20.0%
!!! CTTAGATTGGAATTTTAATT+TGG - chr1_2:49723737-49723756 Msa0074790:intron 20.0%
!! TATCTATGTATATCATGTAT+TGG - chr1_2:49723928-49723947 Msa0074790:intron 20.0%
!! ATCTTAATTAATACATGATC+CGG - chr1_2:49723961-49723980 Msa0074790:intron 20.0%
!! AGAACAAAAAAGTAAATACA+AGG + chr1_2:49724575-49724594 None:intergenic 20.0%
!! CCAATAAATAACTTTGATTA+TGG + chr1_2:49724644-49724663 None:intergenic 20.0%
!! CCATAATCAAAGTTATTTAT+TGG - chr1_2:49724641-49724660 Msa0074790:intron 20.0%
!!! AAAATATAAGGGTATTCTAT+AGG + chr1_2:49724738-49724757 None:intergenic 20.0%
!! GACAGATAATCAAAATATAA+GGG + chr1_2:49724749-49724768 None:intergenic 20.0%
!! AGACAGATAATCAAAATATA+AGG + chr1_2:49724750-49724769 None:intergenic 20.0%
!! CATATGAAATGATGAATTAA+TGG + chr1_2:49725201-49725220 None:intergenic 20.0%
!! CTATTACTTATTTATCTTTG+AGG - chr1_2:49725227-49725246 Msa0074790:intron 20.0%
!!! TCATATATACAAGGTTTTAT+TGG - chr1_2:49725406-49725425 Msa0074790:intron 20.0%
!!! TAAGCAAAAAACTACTTTTT+AGG - chr1_2:49725493-49725512 Msa0074790:intron 20.0%
!!! TAAGCAAAAAACTACTTTTT+AGG + chr1_2:49725493-49725512 None:intergenic 20.0%
!!! AGAAATTCTAGTTTATCATT+GGG - chr1_2:49726016-49726035 Msa0074790:intron 20.0%
!! ATATAACAGGTTAACTTATT+TGG + chr1_2:49726233-49726252 None:intergenic 20.0%
!! TTTATAAAGATGGAAACTTT+AGG - chr1_2:49726728-49726747 Msa0074790:CDS 20.0%
!! TTATAAAGATGGAAACTTTA+GGG - chr1_2:49726729-49726748 Msa0074790:CDS 20.0%
!!! TATTTTTATCGTGAACTAAT+GGG + chr1_2:49727425-49727444 None:intergenic 20.0%
!!! TCTCTTTATAAACGAAATTT+TGG + chr1_2:49728219-49728238 None:intergenic 20.0%
!!! CTATAAGTATATTTTAACTG+AGG - chr1_2:49728388-49728407 Msa0074790:intron 20.0%
!!! TTTTTAGTTGCATATAATAG+TGG - chr1_2:49728690-49728709 Msa0074790:intron 20.0%
!! ACAAAATTGACCAATATATT+TGG - chr1_2:49729520-49729539 Msa0074790:intron 20.0%
!!! TAAAAAGGTTTTGTTGAAAA+AGG - chr1_2:49730112-49730131 Msa0074790:intron 20.0%
!!! AAAAAGGTTTTGTTGAAAAA+GGG - chr1_2:49730113-49730132 Msa0074790:intron 20.0%
!! CAAATGAATAAAGATACAAA+TGG - chr1_2:49730413-49730432 Msa0074790:intron 20.0%
!! AGTAACATAAATAGAGAAAA+AGG + chr1_2:49731466-49731485 None:intergenic 20.0%
!! TAAAATGAGAATAATTGAAG+AGG + chr1_2:49731491-49731510 None:intergenic 20.0%
! AATTGTATCTATTTGTTCTG+CGG - chr1_2:49717404-49717423 Msa0074790:CDS 25.0%
! TAAGGATGAAAAACTGATAA+AGG - chr1_2:49717701-49717720 Msa0074790:intron 25.0%
! GAATTTGAAAAAGTTAGATC+AGG - chr1_2:49717737-49717756 Msa0074790:intron 25.0%
!!! ACGTAACCTTTAATTTTTCT+AGG - chr1_2:49717823-49717842 Msa0074790:intron 25.0%
!!! ACCTTTAATTTTTCTAGGAT+TGG - chr1_2:49717828-49717847 Msa0074790:intron 25.0%
! ACCAATCCTAGAAAAATTAA+AGG + chr1_2:49717832-49717851 None:intergenic 25.0%
!!! TGATTTCTTTTGTTTTCTTG+AGG - chr1_2:49717851-49717870 Msa0074790:intron 25.0%
!!! GATTTCTTTTGTTTTCTTGA+GGG - chr1_2:49717852-49717871 Msa0074790:intron 25.0%
!!! ATTTCTTTTGTTTTCTTGAG+GGG - chr1_2:49717853-49717872 Msa0074790:intron 25.0%
! AAACCTTATAACATCTTCAT+TGG + chr1_2:49717899-49717918 None:intergenic 25.0%
! TTGTTTGATTATACATGTAG+TGG - chr1_2:49717956-49717975 Msa0074790:intron 25.0%
!! CAGAATTCTTATCTAAGATA+TGG + chr1_2:49718024-49718043 None:intergenic 25.0%
! CAATTAAAACATAATGCTAC+GGG + chr1_2:49718110-49718129 None:intergenic 25.0%
!! TGCCATTCTTTGAAAAATAT+AGG - chr1_2:49718328-49718347 Msa0074790:intron 25.0%
!! GCCATTCTTTGAAAAATATA+GGG - chr1_2:49718329-49718348 Msa0074790:intron 25.0%
!!! ACCCTATATTTTTCAAAGAA+TGG + chr1_2:49718333-49718352 None:intergenic 25.0%
!! CTTTGAAAAATATAGGGTAT+AGG - chr1_2:49718335-49718354 Msa0074790:intron 25.0%
! GGTATAGGATAAATAGATTT+AGG - chr1_2:49718350-49718369 Msa0074790:intron 25.0%
! TTTGAATATGGGTGAAAAAA+TGG - chr1_2:49718421-49718440 Msa0074790:intron 25.0%
! TGTACATACTACATAGTTAT+TGG - chr1_2:49718770-49718789 Msa0074790:intron 25.0%
!!! ACAATTTTTTATGTGGCATT+AGG - chr1_2:49718799-49718818 Msa0074790:intron 25.0%
!! TTTAAAACTGCAACAAAAAC+AGG + chr1_2:49719093-49719112 None:intergenic 25.0%
! TACAATAATTGTTGAAAGAG+CGG - chr1_2:49719209-49719228 Msa0074790:CDS 25.0%
! AACTTCAAATAATATATGCC+GGG + chr1_2:49719531-49719550 None:intergenic 25.0%
!! TTTGCATTTAATCCTTTTTG+GGG + chr1_2:49719602-49719621 None:intergenic 25.0%
!! GATTTGCATTTAATCCTTTT+TGG + chr1_2:49719604-49719623 None:intergenic 25.0%
! CTTATCCAAATAAAGAAGAA+TGG - chr1_2:49719633-49719652 Msa0074790:intron 25.0%
! AATATTAAGGAATGGGAAAA+TGG - chr1_2:49719755-49719774 Msa0074790:intron 25.0%
! CTGATTCAATTTCAGATTAA+CGG - chr1_2:49719810-49719829 Msa0074790:intron 25.0%
!!! ATCCATATTTTAACTTTCAC+AGG - chr1_2:49719848-49719867 Msa0074790:intron 25.0%
! TTCCTGTGAAAGTTAAAATA+TGG + chr1_2:49719853-49719872 None:intergenic 25.0%
! AGGTGAAATATATTAATGCT+AGG - chr1_2:49720105-49720124 Msa0074790:intron 25.0%
! AAAATTTAGCAATATGTTCC+AGG + chr1_2:49720427-49720446 None:intergenic 25.0%
!! GAACATATTGCTAAATTTTG+TGG - chr1_2:49720428-49720447 Msa0074790:intron 25.0%
! GTATCTTAGATTATCTCTAT+GGG + chr1_2:49720650-49720669 None:intergenic 25.0%
! TGTATCTTAGATTATCTCTA+TGG + chr1_2:49720651-49720670 None:intergenic 25.0%
! ATTACTGAAAACAGATTCTA+AGG - chr1_2:49720670-49720689 Msa0074790:intron 25.0%
! TTACTGAAAACAGATTCTAA+GGG - chr1_2:49720671-49720690 Msa0074790:intron 25.0%
! AAAAAAGTTCTGTATTATGC+TGG - chr1_2:49720769-49720788 Msa0074790:intron 25.0%
! TACCCTAAAATTCCAATAAT+TGG + chr1_2:49720887-49720906 None:intergenic 25.0%
! AAATATGTTATCGACACTTA+TGG - chr1_2:49721125-49721144 Msa0074790:CDS 25.0%
! ACAAAAATACAGAGAAAATG+TGG + chr1_2:49721163-49721182 None:intergenic 25.0%
! GTTTCTTGTTAAATATAAGC+AGG - chr1_2:49721203-49721222 Msa0074790:CDS 25.0%
!!! TTGGTTTTTCTCATCTTTTT+AGG - chr1_2:49721388-49721407 Msa0074790:CDS 25.0%
! TTAGAACATTTGTCATTGTA+TGG - chr1_2:49721549-49721568 Msa0074790:CDS 25.0%
! AATACATCTAAGAAAACTAC+AGG + chr1_2:49721607-49721626 None:intergenic 25.0%
!! GTAGTTTTCTTAGATGTATT+TGG - chr1_2:49721607-49721626 Msa0074790:CDS 25.0%
!!! TGGTTTTAGTTTTTACTTGT+AGG - chr1_2:49721627-49721646 Msa0074790:CDS 25.0%
! AATTTCCAACAGTTAACAAT+GGG + chr1_2:49721727-49721746 None:intergenic 25.0%
! AGTTACAATACTATACAACA+TGG - chr1_2:49722542-49722561 Msa0074790:CDS 25.0%
! TTGTTAACAAGATTTAGAGA+TGG + chr1_2:49722613-49722632 None:intergenic 25.0%
!! TGAGATGATGAAATTTTTGA+GGG - chr1_2:49722762-49722781 Msa0074790:intron 25.0%
! ATTGAAGCGTAATAGAAATT+TGG - chr1_2:49722794-49722813 Msa0074790:intron 25.0%
! TTGAAGCGTAATAGAAATTT+GGG - chr1_2:49722795-49722814 Msa0074790:intron 25.0%
!!! TGTTTGATTTTGATTGAAGT+TGG - chr1_2:49723024-49723043 Msa0074790:CDS 25.0%
!!! GTTTGATTTTGATTGAAGTT+GGG - chr1_2:49723025-49723044 Msa0074790:CDS 25.0%
! TTAGAGATATCTTATAAGGT+AGG + chr1_2:49723146-49723165 None:intergenic 25.0%
! GTTTGAAGAAAAACTTTAGA+GGG + chr1_2:49723324-49723343 None:intergenic 25.0%
! TGTTTGAAGAAAAACTTTAG+AGG + chr1_2:49723325-49723344 None:intergenic 25.0%
!!! GCTCAAATGAAAATTTTTAG+AGG - chr1_2:49723611-49723630 Msa0074790:intron 25.0%
!!! GATTGGAATTTTAATTTGGA+TGG - chr1_2:49723741-49723760 Msa0074790:intron 25.0%
!!! TTCATGGATTAGTACTAATA+AGG + chr1_2:49723787-49723806 None:intergenic 25.0%
! AGATAAAAAGTAGAACTTAC+TGG + chr1_2:49723913-49723932 None:intergenic 25.0%
! TTGATTATCTGTCTTTCAAA+TGG - chr1_2:49724756-49724775 Msa0074790:intron 25.0%
! CTTTCAAAAAAAATGATAGC+AGG + chr1_2:49725110-49725129 None:intergenic 25.0%
!!! CTGCTATCATTTTTTTTGAA+AGG - chr1_2:49725108-49725127 Msa0074790:intron 25.0%
!! ACTTATTTATCTTTGAGGAA+AGG - chr1_2:49725232-49725251 Msa0074790:intron 25.0%
! TGAAAATAATAAGTTTCCCT+AGG + chr1_2:49725389-49725408 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + chr1_2:49725592-49725611 None:intergenic 25.0%
! CATTGAATAAATGATGTATG+TGG + chr1_2:49725557-49725576 None:intergenic 25.0%
! TTCATATTTGACCAAATTGT+TGG - chr1_2:49725629-49725648 Msa0074790:intron 25.0%
! TAATCATTTCAAACATTCCT+TGG + chr1_2:49725657-49725676 None:intergenic 25.0%
! CAGTTAATAAATGAAGAAGA+TGG - chr1_2:49725869-49725888 Msa0074790:intron 25.0%
! TTAATAAATGAAGAAGATGG+AGG - chr1_2:49725872-49725891 Msa0074790:intron 25.0%
!!! CAGAAATTCTAGTTTATCAT+TGG - chr1_2:49726015-49726034 Msa0074790:intron 25.0%
!!! GAAATTCTAGTTTATCATTG+GGG - chr1_2:49726017-49726036 Msa0074790:intron 25.0%
!! GTTTTATAACTTTTTGTGAG+CGG - chr1_2:49726317-49726336 Msa0074790:intron 25.0%
! TTATCGTATAATAGCAATGT+TGG - chr1_2:49726556-49726575 Msa0074790:intron 25.0%
! TATGATGAAAAATCTGATGA+AGG + chr1_2:49726589-49726608 None:intergenic 25.0%
! TTTCATCATACACAAGTAAA+AGG - chr1_2:49726599-49726618 Msa0074790:intron 25.0%
! AGGACTATTGAAAAATTACA+AGG - chr1_2:49726619-49726638 Msa0074790:intron 25.0%
!!! GAAGTTATTTTTTCAACACT+TGG - chr1_2:49727041-49727060 Msa0074790:intron 25.0%
! ATATTGGCATCCTAAAATTA+TGG - chr1_2:49727385-49727404 Msa0074790:intron 25.0%
!! ATTTTTATCGTGAACTAATG+GGG + chr1_2:49727424-49727443 None:intergenic 25.0%
!!! GTATTTTTATCGTGAACTAA+TGG + chr1_2:49727426-49727445 None:intergenic 25.0%
!! AATTGTGATAGTGATATTGT+TGG - chr1_2:49727861-49727880 Msa0074790:intron 25.0%
! TATTCCTCAAATTCTTCATA+TGG - chr1_2:49728136-49728155 Msa0074790:intron 25.0%
!!! GATCTTTAATTTGTTATCCT+TGG - chr1_2:49728189-49728208 Msa0074790:intron 25.0%
! GAAGAGAAATCCAAATATAT+TGG + chr1_2:49729533-49729552 None:intergenic 25.0%
! TATATTTGGATTTCTCTTCT+TGG - chr1_2:49729534-49729553 Msa0074790:intron 25.0%
!! TTGGTTTAATGGTTATTTCA+TGG - chr1_2:49729553-49729572 Msa0074790:CDS 25.0%
! CATTAATCTGAACAAAAAGA+TGG + chr1_2:49729713-49729732 None:intergenic 25.0%
!! ACATAGTTTTCTTTCTTCTA+AGG - chr1_2:49729945-49729964 Msa0074790:intron 25.0%
!! GTGTTAACTTCAAATTTTTC+AGG - chr1_2:49730147-49730166 Msa0074790:intron 25.0%
!! GTTTTGCTTCTATGTAATTT+TGG - chr1_2:49730259-49730278 Msa0074790:intron 25.0%
!! TGTTAGAATGTTTTTCTGTT+TGG - chr1_2:49730342-49730361 Msa0074790:intron 25.0%
!! ATGTTTTATAGCATTACACT+AGG + chr1_2:49730390-49730409 None:intergenic 25.0%
! ATGAATAAAGATACAAATGG+AGG - chr1_2:49730416-49730435 Msa0074790:intron 25.0%
! AATGTAAAAGTTACTAGTTG+TGG + chr1_2:49730493-49730512 None:intergenic 25.0%
!! ACAACTAGTAACTTTTACAT+TGG - chr1_2:49730492-49730511 Msa0074790:intron 25.0%
!! AAGACAAACTTTCTTTTTGT+AGG - chr1_2:49730567-49730586 Msa0074790:intron 25.0%
! TCTCTCTACATAAATAAGAA+AGG + chr1_2:49730632-49730651 None:intergenic 25.0%
! TCTTCTTTAAATGTGTTAAG+AGG + chr1_2:49731071-49731090 None:intergenic 25.0%
! CACATTTAAAGAAGATTAAG+TGG - chr1_2:49731076-49731095 Msa0074790:intron 25.0%
!!! TGTGAAGTAGTATTTTGTTT+CGG - chr1_2:49731125-49731144 Msa0074790:intron 25.0%
! GGTTATTATAGAAATTAGCA+TGG - chr1_2:49731213-49731232 Msa0074790:intron 25.0%
! TTATAGAAATTAGCATGGTT+TGG - chr1_2:49731218-49731237 Msa0074790:intron 25.0%
! TATAGAAATTAGCATGGTTT+GGG - chr1_2:49731219-49731238 Msa0074790:intron 25.0%
!! TTGTTTCTTTCTCTAATTGT+TGG - chr1_2:49731424-49731443 Msa0074790:intron 25.0%
!!! TTCTCATTTTATGTTGATTG+TGG - chr1_2:49731500-49731519 Msa0074790:intron 25.0%
! TGGATATTTATATCATGCTT+GGG - chr1_2:49731551-49731570 Msa0074790:intron 25.0%
!!! ATTGTGTGCATGAAATTTTT+TGG - chr1_2:49731761-49731780 Msa0074790:CDS 25.0%
!! TTTCCATCGATTGAATTATA+TGG - chr1_2:49731926-49731945 Msa0074790:CDS 25.0%
GAATTAGAAGCTCCAATTTA+TGG - chr1_2:49717534-49717553 Msa0074790:intron 30.0%
! TTTTGTGATGTAGAGAATCT+AGG - chr1_2:49717633-49717652 Msa0074790:intron 30.0%
AAGTAAGTGTTTGAGTGATA+AGG - chr1_2:49717683-49717702 Msa0074790:intron 30.0%
TGAAGATGTTATAAGGTTTC+TGG - chr1_2:49717900-49717919 Msa0074790:intron 30.0%
GGTGATATGATTTAGAAACT+AGG + chr1_2:49718003-49718022 None:intergenic 30.0%
AGGTCATAAGTAAGGATTTA+AGG + chr1_2:49718054-49718073 None:intergenic 30.0%
GTTAGAATCTATGATGACAT+TGG - chr1_2:49718297-49718316 Msa0074790:intron 30.0%
AAATGGTGTATATATGTCTG+TGG - chr1_2:49718438-49718457 Msa0074790:intron 30.0%
AATGGTGTATATATGTCTGT+GGG - chr1_2:49718439-49718458 Msa0074790:intron 30.0%
!!! TACGATAAAAGTTTTTGGGT+AGG + chr1_2:49718644-49718663 None:intergenic 30.0%
TTTCCAAAATGACGTATGAA+TGG - chr1_2:49718673-49718692 Msa0074790:intron 30.0%
TGCTTTATAACAAGTTATGC+TGG - chr1_2:49718711-49718730 Msa0074790:intron 30.0%
TATGCTGGAAGCTATTTAAT+AGG - chr1_2:49718726-49718745 Msa0074790:intron 30.0%
ATGCTGGAAGCTATTTAATA+GGG - chr1_2:49718727-49718746 Msa0074790:intron 30.0%
ATGTACAACACATATAGCAA+GGG + chr1_2:49718757-49718776 None:intergenic 30.0%
TATGTACAACACATATAGCA+AGG + chr1_2:49718758-49718777 None:intergenic 30.0%
GTCATATATCACCAAACAAA+TGG - chr1_2:49718824-49718843 Msa0074790:intron 30.0%
!! GTTGAAGCTTTTAACTGTTA+TGG + chr1_2:49718945-49718964 None:intergenic 30.0%
! AATGATTCTGTGTGTAGTTT+TGG - chr1_2:49718973-49718992 Msa0074790:intron 30.0%
TCTATTCTACATGTACTTGA+TGG + chr1_2:49719010-49719029 None:intergenic 30.0%
!!! TGCAGTTTTAAAATACTCTC+TGG - chr1_2:49719101-49719120 Msa0074790:intron 30.0%
!!! GCAGTTTTAAAATACTCTCT+GGG - chr1_2:49719102-49719121 Msa0074790:intron 30.0%
GCTCTTTCAACAATTATTGT+AGG + chr1_2:49719210-49719229 None:intergenic 30.0%
ACAATAATTGTTGAAAGAGC+GGG - chr1_2:49719210-49719229 Msa0074790:CDS 30.0%
TGAACATTACCAAAGAAGAA+GGG + chr1_2:49719929-49719948 None:intergenic 30.0%
TTGAACATTACCAAAGAAGA+AGG + chr1_2:49719930-49719949 None:intergenic 30.0%
ATATATTAATGCTAGGCTAG+AGG - chr1_2:49720112-49720131 Msa0074790:intron 30.0%
TATATTAATGCTAGGCTAGA+GGG - chr1_2:49720113-49720132 Msa0074790:intron 30.0%
!! TTTGATGAACTTTTAGCCTT+TGG + chr1_2:49720233-49720252 None:intergenic 30.0%
AAAGGCTAAAAGTTCATCAA+AGG - chr1_2:49720232-49720251 Msa0074790:intron 30.0%
! ATTTTGTGGTCAAAGAATCA+AGG - chr1_2:49720442-49720461 Msa0074790:intron 30.0%
TTCCTTTCACATACTTTGTT+TGG - chr1_2:49720511-49720530 Msa0074790:intron 30.0%
TACCAAACAAAGTATGTGAA+AGG + chr1_2:49720516-49720535 None:intergenic 30.0%
TGATCATATATACTGCTAGT+TGG + chr1_2:49720842-49720861 None:intergenic 30.0%
TGTTAAATATAAGCAGGAGA+AGG - chr1_2:49721209-49721228 Msa0074790:CDS 30.0%
ACTATTGCATCAAAGAGTTA+TGG - chr1_2:49721691-49721710 Msa0074790:CDS 30.0%
AATATCCCATTGTTAACTGT+TGG - chr1_2:49721719-49721738 Msa0074790:CDS 30.0%
GAATTTCCAACAGTTAACAA+TGG + chr1_2:49721728-49721747 None:intergenic 30.0%
CTTGAGAAGAGTTTATAAAG+AGG - chr1_2:49721854-49721873 Msa0074790:CDS 30.0%
TGGACTCACATTTAATTGAA+TGG + chr1_2:49721996-49722015 None:intergenic 30.0%
AAATGTGAGTCCATTTATAG+AGG - chr1_2:49722003-49722022 Msa0074790:CDS 30.0%
!!! TTTTGAGTATGCTACTTTTC+AGG - chr1_2:49722241-49722260 Msa0074790:CDS 30.0%
! TTTAGGACTCCAAAAAAACA+CGG + chr1_2:49722280-49722299 None:intergenic 30.0%
AATTGGGAATATTCGTTGTT+TGG - chr1_2:49722462-49722481 Msa0074790:CDS 30.0%
GTATTGTAACTGAACAAACT+AGG + chr1_2:49722533-49722552 None:intergenic 30.0%
!! ATTGAAAATTCTAGAGCACT+TGG + chr1_2:49722585-49722604 None:intergenic 30.0%
!!! TGAGATTTTTGAAGTAGCAA+AGG - chr1_2:49722662-49722681 Msa0074790:CDS 30.0%
TTGCTATAAACCCAAATCTT+TGG - chr1_2:49722710-49722729 Msa0074790:intron 30.0%
ATTTCCTGAACCAAAGATTT+GGG + chr1_2:49722723-49722742 None:intergenic 30.0%
AATTTCCTGAACCAAAGATT+TGG + chr1_2:49722724-49722743 None:intergenic 30.0%
! CTGAGATGATGAAATTTTTG+AGG - chr1_2:49722761-49722780 Msa0074790:intron 30.0%
!! GAGATGATGAAATTTTTGAG+GGG - chr1_2:49722763-49722782 Msa0074790:intron 30.0%
!! AGATGATGAAATTTTTGAGG+GGG - chr1_2:49722764-49722783 Msa0074790:intron 30.0%
! GAGCTTATATGGATTTTGTA+AGG - chr1_2:49723053-49723072 Msa0074790:CDS 30.0%
AGAAACTGCAATTAACATCT+GGG + chr1_2:49723676-49723695 None:intergenic 30.0%
AAGAAACTGCAATTAACATC+TGG + chr1_2:49723677-49723696 None:intergenic 30.0%
! TTCTTATTCTGTTGTTTGAC+TGG - chr1_2:49723702-49723721 Msa0074790:intron 30.0%
! TCTTATTCTGTTGTTTGACT+GGG - chr1_2:49723703-49723722 Msa0074790:intron 30.0%
!! TTTGGTATTCGTTTTGTTCT+AGG - chr1_2:49723816-49723835 Msa0074790:intron 30.0%
TCGACAAAAAACATAACAGA+TGG + chr1_2:49723846-49723865 None:intergenic 30.0%
TGCAGATAACTGCATAAAAA+CGG - chr1_2:49724038-49724057 Msa0074790:intron 30.0%
AGGTATGAATTACCTAATCT+TGG - chr1_2:49724227-49724246 Msa0074790:intron 30.0%
GGTATGAATTACCTAATCTT+GGG - chr1_2:49724228-49724247 Msa0074790:intron 30.0%
GTATGAATTACCTAATCTTG+GGG - chr1_2:49724229-49724248 Msa0074790:intron 30.0%
ACATATATATCCCCAAGATT+AGG + chr1_2:49724242-49724261 None:intergenic 30.0%
! GGATATATATGTGAACGTTT+TGG - chr1_2:49724250-49724269 Msa0074790:intron 30.0%
! CTCTTTTGATACTAGAACAT+TGG - chr1_2:49724314-49724333 Msa0074790:intron 30.0%
ACTTATACGAGGATATGATA+AGG - chr1_2:49724368-49724387 Msa0074790:intron 30.0%
!! TATGATAAGGTGTTGTGTTT+CGG - chr1_2:49724381-49724400 Msa0074790:intron 30.0%
! TGTTTTCAACAACTTAAGCT+AGG + chr1_2:49724543-49724562 None:intergenic 30.0%
! ACTGTTTTCTACAGATATGT+TGG + chr1_2:49724846-49724865 None:intergenic 30.0%
TACATAATGAACATGATAGC+AGG + chr1_2:49725139-49725158 None:intergenic 30.0%
! AATGATGAATTAATGGACGT+AGG + chr1_2:49725194-49725213 None:intergenic 30.0%
! AAATATATCGTTCGGAGTTT+TGG + chr1_2:49725261-49725280 None:intergenic 30.0%
TAAAACAAACTGCATAATGC+AGG + chr1_2:49725339-49725358 None:intergenic 30.0%
ATTACAATGCGAAACTTGAT+AGG - chr1_2:49725673-49725692 Msa0074790:intron 30.0%
ACAGAATGTTTGCAAAAACT+TGG - chr1_2:49725720-49725739 Msa0074790:intron 30.0%
TAACATCATCAACCATTGAA+TGG + chr1_2:49726289-49726308 None:intergenic 30.0%
! ATCTTTGGAAGCTTGAATTT+GGG + chr1_2:49726527-49726546 None:intergenic 30.0%
! AATCTTTGGAAGCTTGAATT+TGG + chr1_2:49726528-49726547 None:intergenic 30.0%
TTGATGAAAACAGTTACATC+CGG - chr1_2:49726653-49726672 Msa0074790:intron 30.0%
ATGGATGCTCTTTATAAAGA+TGG - chr1_2:49726718-49726737 Msa0074790:CDS 30.0%
TCATTACCTTCTCAAAATTC+TGG + chr1_2:49727023-49727042 None:intergenic 30.0%
ATTAAACGAGAAAACACATG+AGG + chr1_2:49727168-49727187 None:intergenic 30.0%
! ATTCATTGCATGCTTGTTAA+AGG + chr1_2:49727349-49727368 None:intergenic 30.0%
TACATTATCAGATGGATCAT+AGG + chr1_2:49727649-49727668 None:intergenic 30.0%
! TATGATCCATCTGATAATGT+AGG - chr1_2:49727648-49727667 Msa0074790:intron 30.0%
! TCTAGAAAAGCACATTACAT+TGG - chr1_2:49727702-49727721 Msa0074790:CDS 30.0%
! CTAGAAAAGCACATTACATT+GGG - chr1_2:49727703-49727722 Msa0074790:CDS 30.0%
! CATTACATTGGGAGATATTT+TGG - chr1_2:49727714-49727733 Msa0074790:CDS 30.0%
TTTAATCAGGTTCGAATCTT+GGG + chr1_2:49727778-49727797 None:intergenic 30.0%
GATTCAATGGATCAAAACTT+TGG - chr1_2:49727915-49727934 Msa0074790:intron 30.0%
GAACATTTAAATATTGCCGA+AGG - chr1_2:49728029-49728048 Msa0074790:intron 30.0%
!! AACGAAATTTTGGTATTCCA+AGG + chr1_2:49728209-49728228 None:intergenic 30.0%
ATGACTGTATATAAGCATAC+AGG + chr1_2:49728367-49728386 None:intergenic 30.0%
!!! ATTTTAACTGAGGCATACTT+TGG - chr1_2:49728398-49728417 Msa0074790:intron 30.0%
AAGCAAATGATCATTCTGTT+TGG - chr1_2:49728533-49728552 Msa0074790:intron 30.0%
AAAACATCAGTGTGACAATA+AGG + chr1_2:49728593-49728612 None:intergenic 30.0%
GATTTCTCTTCTTGGTTTAA+TGG - chr1_2:49729542-49729561 Msa0074790:intron 30.0%
AGTTGAAATGCTTAAAAACC+AGG - chr1_2:49729670-49729689 Msa0074790:intron 30.0%
! TGCACATATTTTTCCTTTTG+TGG - chr1_2:49729757-49729776 Msa0074790:CDS 30.0%
! GCACATATTTTTCCTTTTGT+GGG - chr1_2:49729758-49729777 Msa0074790:CDS 30.0%
! AATCTCAACTGAATTTTCCA+TGG + chr1_2:49729841-49729860 None:intergenic 30.0%
AAAGCTGCTTAATGTTACAA+AGG - chr1_2:49729869-49729888 Msa0074790:intron 30.0%
TAAGTTAAGTCAGTTACCTT+GGG + chr1_2:49729903-49729922 None:intergenic 30.0%
TTAAGTTAAGTCAGTTACCT+TGG + chr1_2:49729904-49729923 None:intergenic 30.0%
ATGTACTAGACAAACTAGAA+CGG + chr1_2:49729929-49729948 None:intergenic 30.0%
! TCTGAGATAAAACAATTGTC+AGG + chr1_2:49730017-49730036 None:intergenic 30.0%
TCTACACTTAAACATCTGAA+TGG + chr1_2:49730045-49730064 None:intergenic 30.0%
! TCCTCTTTGCTTCTTTAAAA+AGG - chr1_2:49730097-49730116 Msa0074790:intron 30.0%
!! ACCTTTTTAAAGAAGCAAAG+AGG + chr1_2:49730101-49730120 None:intergenic 30.0%
TTGCATAAATTGCTTGACTA+AGG - chr1_2:49730216-49730235 Msa0074790:intron 30.0%
ACAAATGGAGGATTTCTTAT+TGG - chr1_2:49730428-49730447 Msa0074790:intron 30.0%
ATGCTTAAACAATGCCTTAA+GGG + chr1_2:49730470-49730489 None:intergenic 30.0%
TTGTTGAGTTAGTTAATAGG+AGG + chr1_2:49730702-49730721 None:intergenic 30.0%
GGATTGTTGAGTTAGTTAAT+AGG + chr1_2:49730705-49730724 None:intergenic 30.0%
! AGGATTGTTGTGATTTTGTT+AGG + chr1_2:49730726-49730745 None:intergenic 30.0%
CTGATTGTTGTGATTATGTT+AGG + chr1_2:49730746-49730765 None:intergenic 30.0%
TATTATTTCCCTTCAGATTG+TGG - chr1_2:49730908-49730927 Msa0074790:intron 30.0%
ATTATTTCCCTTCAGATTGT+GGG - chr1_2:49730909-49730928 Msa0074790:intron 30.0%
TGGTTGCATCTATTACTTAA+TGG - chr1_2:49731041-49731060 Msa0074790:intron 30.0%
CTTTAAATGTGTTAAGAGGA+GGG + chr1_2:49731067-49731086 None:intergenic 30.0%
TCTTTAAATGTGTTAAGAGG+AGG + chr1_2:49731068-49731087 None:intergenic 30.0%
ATAGAAATTAGCATGGTTTG+GGG - chr1_2:49731220-49731239 Msa0074790:intron 30.0%
! ATAATCCCAAGTTTCAAGTA+GGG + chr1_2:49731330-49731349 None:intergenic 30.0%
! AATAATCCCAAGTTTCAAGT+AGG + chr1_2:49731331-49731350 None:intergenic 30.0%
!! AGGGAAGTATTAGAAAAAAG+CGG + chr1_2:49731402-49731421 None:intergenic 30.0%
ATTAGAGAAAGAAACAAGCA+GGG + chr1_2:49731421-49731440 None:intergenic 30.0%
AATTAGAGAAAGAAACAAGC+AGG + chr1_2:49731422-49731441 None:intergenic 30.0%
!! CATTTTATGTTGATTGTGGA+TGG - chr1_2:49731504-49731523 Msa0074790:intron 30.0%
GTGGATATTTATATCATGCT+TGG - chr1_2:49731550-49731569 Msa0074790:intron 30.0%
GAAATCATTCTTGCCATATT+TGG - chr1_2:49731573-49731592 Msa0074790:intron 30.0%
!!! TGTGCATGAAATTTTTTGGT+GGG - chr1_2:49731765-49731784 Msa0074790:CDS 30.0%
AAATCTGACACTCATCTTAA+GGG + chr1_2:49731846-49731865 None:intergenic 30.0%
TCACCATATAATTCAATCGA+TGG + chr1_2:49731932-49731951 None:intergenic 30.0%
ATCGATTGAATTATATGGTG+AGG - chr1_2:49731931-49731950 Msa0074790:CDS 30.0%
! GAATTATATGGTGAGGTTTT+TGG - chr1_2:49731938-49731957 Msa0074790:CDS 30.0%
!! TTCTAGAAGCTTCTAGAACT+TGG + chr1_2:49717132-49717151 None:intergenic 35.0%
ATGAAGCTTAAAATGATCGC+CGG + chr1_2:49717275-49717294 None:intergenic 35.0%
AAACTGATAAAGGTAGTTGC+TGG - chr1_2:49717711-49717730 Msa0074790:intron 35.0%
ATAACTTTGAGTGTGCGAAA+AGG - chr1_2:49717763-49717782 Msa0074790:intron 35.0%
TATAACATCTTCATTGGCAC+TGG + chr1_2:49717893-49717912 None:intergenic 35.0%
GTGCCAATGAAGATGTTATA+AGG - chr1_2:49717893-49717912 Msa0074790:intron 35.0%
ATCCTTACTTATGACCTTTC+TGG - chr1_2:49718057-49718076 Msa0074790:CDS 35.0%
TCCTTACTTATGACCTTTCT+GGG - chr1_2:49718058-49718077 Msa0074790:CDS 35.0%
AGTGAAAATCATTGCACATG+TGG - chr1_2:49718137-49718156 Msa0074790:intron 35.0%
CATGAGATTCTAGTAGTAGT+AGG - chr1_2:49718175-49718194 Msa0074790:intron 35.0%
AGATTCTAGTAGTAGTAGGT+TGG - chr1_2:49718179-49718198 Msa0074790:intron 35.0%
ATGGTGTATATATGTCTGTG+GGG - chr1_2:49718440-49718459 Msa0074790:intron 35.0%
ATAGGAATTAGGAGCTGAAT+GGG - chr1_2:49718474-49718493 Msa0074790:intron 35.0%
AGTGAATTTCAATGATCTGC+TGG - chr1_2:49718579-49718598 Msa0074790:intron 35.0%
! ATGCCATTCATACGTCATTT+TGG + chr1_2:49718679-49718698 None:intergenic 35.0%
AAATGACGTATGAATGGCAT+AGG - chr1_2:49718679-49718698 Msa0074790:intron 35.0%
CACGAAAAACTCCATTTGTT+TGG + chr1_2:49718838-49718857 None:intergenic 35.0%
! CAAACAAATGGAGTTTTTCG+TGG - chr1_2:49718836-49718855 Msa0074790:CDS 35.0%
! TCTGTCTTGAACATTGCTTT+TGG - chr1_2:49718900-49718919 Msa0074790:intron 35.0%
TGTTATGGAATGCAGAGATT+GGG + chr1_2:49718930-49718949 None:intergenic 35.0%
!! ACATGTACTTGATGGATTCA+TGG + chr1_2:49719002-49719021 None:intergenic 35.0%
GAATAGAACTGAAAAGCGAA+AGG + chr1_2:49719141-49719160 None:intergenic 35.0%
CAATAATTGTTGAAAGAGCG+GGG - chr1_2:49719211-49719230 Msa0074790:CDS 35.0%
GTAAAACCCAACAAACATAC+AGG + chr1_2:49719354-49719373 None:intergenic 35.0%
!!! TTAATCCTTTTTGGGGTAAC+AGG + chr1_2:49719595-49719614 None:intergenic 35.0%
GCACTCCATTCTTCTTTATT+TGG + chr1_2:49719641-49719660 None:intergenic 35.0%
AAGGAATGGGAAAATGGAAT+TGG - chr1_2:49719761-49719780 Msa0074790:intron 35.0%
TTGAATCAGTCATACTGTCT+AGG + chr1_2:49719799-49719818 None:intergenic 35.0%
TGCATTTCACATATGTCGTT+CGG - chr1_2:49720003-49720022 Msa0074790:intron 35.0%
CATCTACTACTGTGAGTTTA+CGG - chr1_2:49720053-49720072 Msa0074790:intron 35.0%
TATTTCACCTGAAACCATTG+TGG + chr1_2:49720095-49720114 None:intergenic 35.0%
ATATTAATGCTAGGCTAGAG+GGG - chr1_2:49720114-49720133 Msa0074790:intron 35.0%
TCTTCAAATGGTATCTCTAG+TGG - chr1_2:49720155-49720174 Msa0074790:intron 35.0%
ATCTCTAGTGGTTATATCAC+TGG - chr1_2:49720167-49720186 Msa0074790:intron 35.0%
! TTCTTGGGATTAGCATTCAA+AGG + chr1_2:49720203-49720222 None:intergenic 35.0%
! TCAAAGGAGACATCTCTTTT+TGG - chr1_2:49720248-49720267 Msa0074790:intron 35.0%
CCACGACAATATACAATATG+TGG + chr1_2:49721087-49721106 None:intergenic 35.0%
CCACATATTGTATATTGTCG+TGG - chr1_2:49721084-49721103 Msa0074790:CDS 35.0%
TGAACCTATCAAGGTGTATT+CGG - chr1_2:49721253-49721272 Msa0074790:CDS 35.0%
!!! AGAATCGAACGTCTTGTTTT+GGG - chr1_2:49721362-49721381 Msa0074790:CDS 35.0%
! AGTTTTTACTTGTAGGCTTG+TGG - chr1_2:49721634-49721653 Msa0074790:CDS 35.0%
GAGAAGAGTTTATAAAGAGG+AGG - chr1_2:49721857-49721876 Msa0074790:CDS 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr1_2:49721901-49721920 None:intergenic 35.0%
! GAGGTAAAAGCATAAACCAT+AGG - chr1_2:49721949-49721968 Msa0074790:CDS 35.0%
AAAAACCGCACCTCTATAAA+TGG + chr1_2:49722016-49722035 None:intergenic 35.0%
!! ATTTATAGAGGTGCGGTTTT+TGG - chr1_2:49722015-49722034 Msa0074790:CDS 35.0%
!!! GCTGATTATCCGTGTTTTTT+TGG - chr1_2:49722268-49722287 Msa0074790:CDS 35.0%
TCAGATAGTTGTGTGCTTAA+TGG + chr1_2:49722316-49722335 None:intergenic 35.0%
ATTCCCAATTGCCTAAAACA+GGG + chr1_2:49722452-49722471 None:intergenic 35.0%
TATTCCCAATTGCCTAAAAC+AGG + chr1_2:49722453-49722472 None:intergenic 35.0%
AACAAGATTTAGAGATGGCA+AGG + chr1_2:49722608-49722627 None:intergenic 35.0%
! TAGCAAAGGTTTTCACAAGA+GGG - chr1_2:49722676-49722695 Msa0074790:intron 35.0%
! TAAACCCAAATCTTTGGTTC+AGG - chr1_2:49722716-49722735 Msa0074790:intron 35.0%
GAACCAAAAATCTCAGTTCT+TGG + chr1_2:49722855-49722874 None:intergenic 35.0%
!!! AGAACTGAGATTTTTGGTTC+AGG - chr1_2:49722855-49722874 Msa0074790:CDS 35.0%
!!! TGATTTTGATTGAAGTTGGG+TGG - chr1_2:49723028-49723047 Msa0074790:CDS 35.0%
!!! GATTTTGATTGAAGTTGGGT+GGG - chr1_2:49723029-49723048 Msa0074790:CDS 35.0%
!!! ATTTTGATTGAAGTTGGGTG+GGG - chr1_2:49723030-49723049 Msa0074790:CDS 35.0%
CACATGAGTCGCTTAAAAAA+AGG + chr1_2:49723384-49723403 None:intergenic 35.0%
!!! CTTTTTTTAAGCGACTCATG+TGG - chr1_2:49723382-49723401 Msa0074790:intron 35.0%
! GGTTTCAGTTTAGCTTAGAT+TGG - chr1_2:49723724-49723743 Msa0074790:intron 35.0%
!!! TTTTTTGTCGAAAGACCTCT+TGG - chr1_2:49723855-49723874 Msa0074790:intron 35.0%
! TTTTTGTCGAAAGACCTCTT+GGG - chr1_2:49723856-49723875 Msa0074790:intron 35.0%
TAATACATGATCCGGTAATC+AGG - chr1_2:49723969-49723988 Msa0074790:intron 35.0%
CTTCAAAAGAACCTGATTAC+CGG + chr1_2:49723983-49724002 None:intergenic 35.0%
!!! TAATCAGGTTCTTTTGAAGC+TGG - chr1_2:49723984-49724003 Msa0074790:intron 35.0%
CACAGCACCTACAATAAAAA+TGG + chr1_2:49724288-49724307 None:intergenic 35.0%
TAATTATTCCTTACCACGCA+TGG + chr1_2:49724687-49724706 None:intergenic 35.0%
TGTAGAAAACAGTATCCAAG+AGG - chr1_2:49724853-49724872 Msa0074790:CDS 35.0%
GTAGAAAACAGTATCCAAGA+GGG - chr1_2:49724854-49724873 Msa0074790:CDS 35.0%
! GTTGGATCCCTTTTAATCAA+AGG + chr1_2:49725024-49725043 None:intergenic 35.0%
!!! CGATCTTTCACTTTTTCCTA+GGG - chr1_2:49725370-49725389 Msa0074790:intron 35.0%
AGCTTGTCAGCATATTAGTT+TGG - chr1_2:49725440-49725459 Msa0074790:intron 35.0%
CATTGAATGAGTGATGAATG+TGG - chr1_2:49725518-49725537 Msa0074790:intron 35.0%
TTGCTTATAATAGTGACCAG+AGG - chr1_2:49725595-49725614 Msa0074790:intron 35.0%
TGCTTATAATAGTGACCAGA+GGG - chr1_2:49725596-49725615 Msa0074790:intron 35.0%
AATGTTTGCAAAAACTTGGC+CGG - chr1_2:49725724-49725743 Msa0074790:intron 35.0%
AAGGGTCAAAGGATGAAAAT+AGG + chr1_2:49725763-49725782 None:intergenic 35.0%
ACTCCTAATCTATCTGGTTA+TGG - chr1_2:49725968-49725987 Msa0074790:intron 35.0%
GTTCCATAACCAGATAGATT+AGG + chr1_2:49725974-49725993 None:intergenic 35.0%
AACTTCAGCTATTGTTGCAA+TGG - chr1_2:49725991-49726010 Msa0074790:intron 35.0%
! TAATGCTTGTTGCCATTCAA+TGG - chr1_2:49726274-49726293 Msa0074790:intron 35.0%
ATTCAAGCTTCCAAAGATTC+TGG - chr1_2:49726529-49726548 Msa0074790:intron 35.0%
TGATGAAAACAGTTACATCC+GGG - chr1_2:49726654-49726673 Msa0074790:intron 35.0%
ATATACTGCCTATCCACATT+GGG + chr1_2:49726700-49726719 None:intergenic 35.0%
! AATAGTGGCCTCTGAAAATT+AGG + chr1_2:49726775-49726794 None:intergenic 35.0%
GCTACGTTCTTTCTTAATAG+TGG + chr1_2:49726790-49726809 None:intergenic 35.0%
GATGATAGTCACTTATCTGT+TGG - chr1_2:49726844-49726863 Msa0074790:intron 35.0%
GAGATGTCAAATTATGCAGA+TGG - chr1_2:49726868-49726887 Msa0074790:intron 35.0%
TAACGAGTGAAGGTAATTGA+AGG + chr1_2:49726965-49726984 None:intergenic 35.0%
CAATTACCTTCACTCGTTAT+TGG - chr1_2:49726966-49726985 Msa0074790:intron 35.0%
TTATTGGAGCAAGGTCAAAA+GGG - chr1_2:49726982-49727001 Msa0074790:intron 35.0%
!! AGTAGTCCAGAATTTTGAGA+AGG - chr1_2:49727014-49727033 Msa0074790:intron 35.0%
ACGAATAATATCTGCAAGTG+TGG + chr1_2:49727103-49727122 None:intergenic 35.0%
TGTAACCTTCAAATGGCTTT+CGG + chr1_2:49727131-49727150 None:intergenic 35.0%
AAAGCCATTTGAAGGTTACA+TGG - chr1_2:49727131-49727150 Msa0074790:intron 35.0%
! ATAACAGCCAATTTAGCCTT+TGG + chr1_2:49727309-49727328 None:intergenic 35.0%
TAACAAGCATGCAATGAATC+CGG - chr1_2:49727350-49727369 Msa0074790:intron 35.0%
! ACTTGGCAAGCCATAATTTT+AGG + chr1_2:49727398-49727417 None:intergenic 35.0%
TTAAGTCTACTTCAATGCGA+GGG + chr1_2:49727584-49727603 None:intergenic 35.0%
ATTAAGTCTACTTCAATGCG+AGG + chr1_2:49727585-49727604 None:intergenic 35.0%
ATCTGCAAAACAAGAAAGAG+CGG - chr1_2:49727610-49727629 Msa0074790:intron 35.0%
GATGTTCCTACATTATCAGA+TGG + chr1_2:49727657-49727676 None:intergenic 35.0%
!! TACATTGGGAGATATTTTGG+TGG - chr1_2:49727717-49727736 Msa0074790:CDS 35.0%
CTTTAATCAGGTTCGAATCT+TGG + chr1_2:49727779-49727798 None:intergenic 35.0%
GATAGTAGCATGAACTTTGA+AGG - chr1_2:49727966-49727985 Msa0074790:intron 35.0%
AGAAAGATGTTCAAAGCCTT+CGG + chr1_2:49728048-49728067 None:intergenic 35.0%
CTCACCATATGAAGAATTTG+AGG + chr1_2:49728143-49728162 None:intergenic 35.0%
AGAGAGACAAATAGATAACG+AGG - chr1_2:49728234-49728253 Msa0074790:intron 35.0%
GAGAGACAAATAGATAACGA+GGG - chr1_2:49728235-49728254 Msa0074790:intron 35.0%
ACGAGGTTGAAACAAAAATG+GGG + chr1_2:49728322-49728341 None:intergenic 35.0%
GACGAGGTTGAAACAAAAAT+GGG + chr1_2:49728323-49728342 None:intergenic 35.0%
TGACGAGGTTGAAACAAAAA+TGG + chr1_2:49728324-49728343 None:intergenic 35.0%
! GAAGCACTATTTCAAGTAAG+CGG - chr1_2:49728479-49728498 Msa0074790:intron 35.0%
GAACAAAAAGATGGCACAAA+AGG + chr1_2:49729704-49729723 None:intergenic 35.0%
! TTTTCCTTTTGTGGGCATAT+CGG - chr1_2:49729766-49729785 Msa0074790:CDS 35.0%
! AATTTTCCATGGCATCTTTC+TGG + chr1_2:49729830-49729849 None:intergenic 35.0%
TGTACTAGACAAACTAGAAC+GGG + chr1_2:49729928-49729947 None:intergenic 35.0%
! TGAGTTTTCATCCTTTCTTC+AGG - chr1_2:49729969-49729988 Msa0074790:intron 35.0%
GACTAAGGTAAAGTGCATAA+AGG - chr1_2:49730231-49730250 Msa0074790:intron 35.0%
AGGAATTCTTTCTTGCTCAA+AGG + chr1_2:49730370-49730389 None:intergenic 35.0%
AATGATAACAAGTGCCCTTA+AGG - chr1_2:49730453-49730472 Msa0074790:intron 35.0%
GATGCTTAAACAATGCCTTA+AGG + chr1_2:49730471-49730490 None:intergenic 35.0%
TTCCTTAAACAATGCCCTTA+GGG - chr1_2:49730590-49730609 Msa0074790:intron 35.0%
ATTAGTTGAGGAGGAAATGT+TGG + chr1_2:49730802-49730821 None:intergenic 35.0%
TTATTTCCCTTCAGATTGTG+GGG - chr1_2:49730910-49730929 Msa0074790:intron 35.0%
CAAAAGCTTCAAACAATGCA+GGG + chr1_2:49730980-49730999 None:intergenic 35.0%
AATTCATCCAACTGGAGATT+AGG - chr1_2:49731151-49731170 Msa0074790:intron 35.0%
ATTCATCCAACTGGAGATTA+GGG - chr1_2:49731152-49731171 Msa0074790:intron 35.0%
AAATATGCCACAGGCATTTA+GGG + chr1_2:49731270-49731289 None:intergenic 35.0%
!! GGAAGTATTAGAAAAAAGCG+GGG + chr1_2:49731379-49731398 None:intergenic 35.0%
!! GGGAAGTATTAGAAAAAAGC+GGG + chr1_2:49731380-49731399 None:intergenic 35.0%
!! GGGGAAGTATTAGAAAAAAG+CGG + chr1_2:49731381-49731400 None:intergenic 35.0%
!! GGAAGTATTAGAAAAAAGCG+GGG + chr1_2:49731379-49731398 None:intergenic 35.0%
!! GGGAAGTATTAGAAAAAAGC+GGG + chr1_2:49731380-49731399 None:intergenic 35.0%
TCATTCTTGCCATATTTGGA+AGG - chr1_2:49731577-49731596 Msa0074790:intron 35.0%
!!! GTGTGCATGAAATTTTTTGG+TGG - chr1_2:49731764-49731783 Msa0074790:CDS 35.0%
ACACTCATCTTAAGGGAAAA+GGG + chr1_2:49731839-49731858 None:intergenic 35.0%
CAAATCTGACACTCATCTTA+AGG + chr1_2:49731847-49731866 None:intergenic 35.0%
CTTAAGATGAGTGTCAGATT+TGG - chr1_2:49731845-49731864 Msa0074790:CDS 35.0%
!!! TATGGTGAGGTTTTTGGTAA+AGG - chr1_2:49731944-49731963 Msa0074790:CDS 35.0%
!!! GAGGTTTTTGGTAAAGGTTA+TGG - chr1_2:49731950-49731969 Msa0074790:CDS 35.0%
!! TAGAAGCTTCTAGAACTTGG+TGG + chr1_2:49717129-49717148 None:intergenic 40.0%
ATCGACGAGTGATGAAACTT+CGG + chr1_2:49717170-49717189 None:intergenic 40.0%
! TTGTTGCTTGGATCTCTTGA+AGG - chr1_2:49717189-49717208 Msa0074790:three_prime_UTR 40.0%
AGAATCTAGGAATCTGCGTT+TGG - chr1_2:49717646-49717665 Msa0074790:intron 40.0%
TAGGAATCTGCGTTTGGATT+AGG - chr1_2:49717652-49717671 Msa0074790:intron 40.0%
TGATAAAGGTAGTTGCTGGT+TGG - chr1_2:49717715-49717734 Msa0074790:intron 40.0%
AAACATAATGCTACGGGCAA+TGG + chr1_2:49718104-49718123 None:intergenic 40.0%
GGCTTGAGAATGATTTGACA+TGG + chr1_2:49718261-49718280 None:intergenic 40.0%
GATAGGAATTAGGAGCTGAA+TGG - chr1_2:49718473-49718492 Msa0074790:intron 40.0%
TCTGACTATATAACTGCAGC+GGG + chr1_2:49718560-49718579 None:intergenic 40.0%
CTCTGACTATATAACTGCAG+CGG + chr1_2:49718561-49718580 None:intergenic 40.0%
CTGTTATGGAATGCAGAGAT+TGG + chr1_2:49718931-49718950 None:intergenic 40.0%
GGATGACGAATGTCATTGTA+AGG + chr1_2:49719055-49719074 None:intergenic 40.0%
GAAAAGCGAAAGGAAGTTGA+AGG + chr1_2:49719131-49719150 None:intergenic 40.0%
TTGCTTGGACATGCAAAAAC+TGG - chr1_2:49719238-49719257 Msa0074790:intron 40.0%
TCTTCCTCCTGTATGTTTGT+TGG - chr1_2:49719344-49719363 Msa0074790:intron 40.0%
CTTCCTCCTGTATGTTTGTT+GGG - chr1_2:49719345-49719364 Msa0074790:intron 40.0%
AAACCCAACAAACATACAGG+AGG + chr1_2:49719351-49719370 None:intergenic 40.0%
!! AGCAGCTATTTTGTGCATTG+AGG - chr1_2:49719491-49719510 Msa0074790:intron 40.0%
TGATACCTGTTACCCCAAAA+AGG - chr1_2:49719587-49719606 Msa0074790:intron 40.0%
AGGAAATGTATGCACAAGCT+GGG - chr1_2:49719868-49719887 Msa0074790:intron 40.0%
ACATTACCAAAGAAGAAGGG+AGG + chr1_2:49719926-49719945 None:intergenic 40.0%
TATGTCGTTCGGACATTTGA+AGG - chr1_2:49720014-49720033 Msa0074790:intron 40.0%
! CCATTTGAAGACTGAGCTTT+TGG + chr1_2:49720146-49720165 None:intergenic 40.0%
CCAAAAGCTCAGTCTTCAAA+TGG - chr1_2:49720143-49720162 Msa0074790:intron 40.0%
TCCCAAGAAAAGTAGTCCAA+AGG - chr1_2:49720214-49720233 Msa0074790:intron 40.0%
!! GCCTTTGGACTACTTTTCTT+GGG + chr1_2:49720218-49720237 None:intergenic 40.0%
!! AGCCTTTGGACTACTTTTCT+TGG + chr1_2:49720219-49720238 None:intergenic 40.0%
! AAGGAGACATCTCTTTTTGG+AGG - chr1_2:49720251-49720270 Msa0074790:intron 40.0%
TTGTGGTCAAAGAATCAAGG+TGG - chr1_2:49720445-49720464 Msa0074790:intron 40.0%
TTCTGTATTATGCTGGTGTG+TGG - chr1_2:49720776-49720795 Msa0074790:intron 40.0%
TCTGTATTATGCTGGTGTGT+GGG - chr1_2:49720777-49720796 Msa0074790:intron 40.0%
AGAGAAAATGTGGCTAACGA+GGG + chr1_2:49721153-49721172 None:intergenic 40.0%
GATAGGTTCAATGCCTTTCT+CGG + chr1_2:49721243-49721262 None:intergenic 40.0%
!! GAAAGGCATTGAACCTATCA+AGG - chr1_2:49721244-49721263 Msa0074790:CDS 40.0%
TTCTCCGAATACACCTTGAT+AGG + chr1_2:49721260-49721279 None:intergenic 40.0%
TATCAAGGTGTATTCGGAGA+AGG - chr1_2:49721259-49721278 Msa0074790:CDS 40.0%
ATTCGGAGAAGGAATTCATC+AGG - chr1_2:49721270-49721289 Msa0074790:CDS 40.0%
TTCGGAGAAGGAATTCATCA+GGG - chr1_2:49721271-49721290 Msa0074790:CDS 40.0%
ATCTACCCTTGTACCAGAAA+AGG - chr1_2:49721310-49721329 Msa0074790:CDS 40.0%
!!! GAGAATCGAACGTCTTGTTT+TGG - chr1_2:49721361-49721380 Msa0074790:CDS 40.0%
GTATGGACATCTTTAACACG+AGG - chr1_2:49721566-49721585 Msa0074790:CDS 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG - chr1_2:49721821-49721840 Msa0074790:CDS 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG - chr1_2:49721822-49721841 Msa0074790:CDS 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr1_2:49721899-49721918 Msa0074790:CDS 40.0%
AAGCATAAACCATAGGTCTG+TGG - chr1_2:49721956-49721975 Msa0074790:CDS 40.0%
AGCATAAACCATAGGTCTGT+GGG - chr1_2:49721957-49721976 Msa0074790:CDS 40.0%
TGAGTCCATTTATAGAGGTG+CGG - chr1_2:49722008-49722027 Msa0074790:CDS 40.0%
!! ATGGTCCAACAAGCTGTTTT+AGG + chr1_2:49722297-49722316 None:intergenic 40.0%
AAGGTCTACCATTGTGAAAC+AGG - chr1_2:49722339-49722358 Msa0074790:CDS 40.0%
! TGTTATGCAGACCCTGTTTT+AGG - chr1_2:49722438-49722457 Msa0074790:CDS 40.0%
!! AGACCCTGTTTTAGGCAATT+GGG - chr1_2:49722446-49722465 Msa0074790:CDS 40.0%
GGAATATTCGTTGTTTGGCT+AGG - chr1_2:49722467-49722486 Msa0074790:CDS 40.0%
! GTAGCAAAGGTTTTCACAAG+AGG - chr1_2:49722675-49722694 Msa0074790:intron 40.0%
! AGCAAAGGTTTTCACAAGAG+GGG - chr1_2:49722677-49722696 Msa0074790:intron 40.0%
! CAGCCAAGAACTGAGATTTT+TGG - chr1_2:49722849-49722868 Msa0074790:CDS 40.0%
!!! AGATTTTTGGTTCAGGACAG+AGG - chr1_2:49722862-49722881 Msa0074790:CDS 40.0%
AAGACAGGCGAACATACTAA+GGG + chr1_2:49722896-49722915 None:intergenic 40.0%
TTCATATGCTGAGACAAGAC+AGG + chr1_2:49722911-49722930 None:intergenic 40.0%
!! TTTTGATTGAAGTTGGGTGG+GGG - chr1_2:49723031-49723050 Msa0074790:CDS 40.0%
GTTCAACATCATCTCAGGTT+TGG + chr1_2:49723185-49723204 None:intergenic 40.0%
! ATTATTAGGCTCTAGCTGAG+AGG + chr1_2:49723207-49723226 None:intergenic 40.0%
ATGCTTCAAAATCACCCAAG+AGG + chr1_2:49723873-49723892 None:intergenic 40.0%
TTTGCACAATCAACTATCCG+AGG + chr1_2:49724179-49724198 None:intergenic 40.0%
TCAGCTGATCGTTGTATTTC+TGG + chr1_2:49724349-49724368 None:intergenic 40.0%
CCTTGCCATCATATTCCTTA+CGG - chr1_2:49724903-49724922 Msa0074790:intron 40.0%
CATCATATTCCTTACGGAGT+CGG - chr1_2:49724909-49724928 Msa0074790:intron 40.0%
ATCATATTCCTTACGGAGTC+GGG - chr1_2:49724910-49724929 Msa0074790:intron 40.0%
!!! GCGATCTTTCACTTTTTCCT+AGG - chr1_2:49725369-49725388 Msa0074790:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr1_2:49725479-49725498 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr1_2:49725480-49725499 None:intergenic 40.0%
ATGAAAAATGCTACTCCCTC+TGG + chr1_2:49725614-49725633 None:intergenic 40.0%
ATTCCTTGGCACCAACAATT+TGG + chr1_2:49725643-49725662 None:intergenic 40.0%
AATGCGAAACTTGATAGGTG+CGG - chr1_2:49725678-49725697 Msa0074790:intron 40.0%
AAAGGATGAAAATAGGCGAC+GGG + chr1_2:49725756-49725775 None:intergenic 40.0%
CAAAGGATGAAAATAGGCGA+CGG + chr1_2:49725757-49725776 None:intergenic 40.0%
CTTTGACCCTTCTATTCAGA+GGG - chr1_2:49725772-49725791 Msa0074790:intron 40.0%
CACATACCCTCTGAATAGAA+GGG + chr1_2:49725781-49725800 None:intergenic 40.0%
ACACATACCCTCTGAATAGA+AGG + chr1_2:49725782-49725801 None:intergenic 40.0%
AAGAAGATGGAGGCAAACAT+AGG - chr1_2:49725882-49725901 Msa0074790:intron 40.0%
ATTAGGAGTTGAAGCTTGAC+TGG + chr1_2:49725957-49725976 None:intergenic 40.0%
GCTTCAACTCCTAATCTATC+TGG - chr1_2:49725962-49725981 Msa0074790:intron 40.0%
TTGTGAAAGAAGAACACCAG+AGG + chr1_2:49726053-49726072 None:intergenic 40.0%
CTTTCACAAGCTAAGTCACT+TGG - chr1_2:49726064-49726083 Msa0074790:intron 40.0%
CAAGCTAAGTCACTTGGTAA+TGG - chr1_2:49726070-49726089 Msa0074790:intron 40.0%
! CGATCTTCAAGTTTGGATCT+AGG - chr1_2:49726205-49726224 Msa0074790:intron 40.0%
AGGTGACTCTGTTGTTAAAG+GGG + chr1_2:49726443-49726462 None:intergenic 40.0%
CAGGTGACTCTGTTGTTAAA+GGG + chr1_2:49726444-49726463 None:intergenic 40.0%
! CGATAACTTGCCAGAATCTT+TGG + chr1_2:49726542-49726561 None:intergenic 40.0%
ATATGAACCCCAATGTGGAT+AGG - chr1_2:49726689-49726708 Msa0074790:intron 40.0%
TATACTGCCTATCCACATTG+GGG + chr1_2:49726699-49726718 None:intergenic 40.0%
CATATACTGCCTATCCACAT+TGG + chr1_2:49726701-49726720 None:intergenic 40.0%
CAATGTGGATAGGCAGTATA+TGG - chr1_2:49726699-49726718 Msa0074790:intron 40.0%
! GTTGTGTGCCTAATTTTCAG+AGG - chr1_2:49726764-49726783 Msa0074790:CDS 40.0%
TGAACTAAGTCCTTCACTCA+GGG + chr1_2:49726914-49726933 None:intergenic 40.0%
GTTATTGGAGCAAGGTCAAA+AGG - chr1_2:49726981-49727000 Msa0074790:intron 40.0%
! GCATGTGCGATTTTATGATG+GGG + chr1_2:49727072-49727091 None:intergenic 40.0%
! CGCATGTGCGATTTTATGAT+GGG + chr1_2:49727073-49727092 None:intergenic 40.0%
CCATCATAAAATCGCACATG+CGG - chr1_2:49727071-49727090 Msa0074790:intron 40.0%
CGTTCCATGTAACCTTCAAA+TGG + chr1_2:49727138-49727157 None:intergenic 40.0%
TACGTTCTCTTGACGAACAA+AGG - chr1_2:49727280-49727299 Msa0074790:intron 40.0%
AAGGTCTCCAAAGGCTAAAT+TGG - chr1_2:49727299-49727318 Msa0074790:intron 40.0%
TAAGTCTACTTCAATGCGAG+GGG + chr1_2:49727583-49727602 None:intergenic 40.0%
AGATGGATCATAGGAAGACT+TGG + chr1_2:49727640-49727659 None:intergenic 40.0%
GACAGTGTAAGCAAGATCTT+TGG + chr1_2:49727895-49727914 None:intergenic 40.0%
!! TGCTTACACTGTCGATTCAA+TGG - chr1_2:49727902-49727921 Msa0074790:intron 40.0%
TACTATCCACGTATCCAAGT+CGG + chr1_2:49727953-49727972 None:intergenic 40.0%
CCATTAACATCCACATCAGA+TGG + chr1_2:49727996-49728015 None:intergenic 40.0%
CCATCTGATGTGGATGTTAA+TGG - chr1_2:49727993-49728012 Msa0074790:intron 40.0%
AGACAAATAGATAACGAGGG+AGG - chr1_2:49728238-49728257 Msa0074790:intron 40.0%
GACAAATAGATAACGAGGGA+GGG - chr1_2:49728239-49728258 Msa0074790:intron 40.0%
TTGTCTGTGTAGATATGCAG+TGG - chr1_2:49728448-49728467 Msa0074790:intron 40.0%
TGTCTGTGTAGATATGCAGT+GGG - chr1_2:49728449-49728468 Msa0074790:intron 40.0%
TGATCATTCTGTTTGGATCC+AGG - chr1_2:49728540-49728559 Msa0074790:intron 40.0%
CTCATCAAATCAAACATGCC+TGG + chr1_2:49728561-49728580 None:intergenic 40.0%
! TTTCCTTTTGTGGGCATATC+GGG - chr1_2:49729767-49729786 Msa0074790:CDS 40.0%
TTGTTTCCAGAAAGATGCCA+TGG - chr1_2:49729821-49729840 Msa0074790:CDS 40.0%
TACAAAGGATACTGTTCCCA+AGG - chr1_2:49729884-49729903 Msa0074790:intron 40.0%
! TTCGTTTGAGACCTGAAGAA+AGG + chr1_2:49729983-49730002 None:intergenic 40.0%
!!! GGTTTTGTTGAAAAAGGGAG+TGG - chr1_2:49730118-49730137 Msa0074790:intron 40.0%
!! AACAGCATTGATTACTGTGC+AGG + chr1_2:49730326-49730345 None:intergenic 40.0%
GTTCCTTAAACAATGCCCTT+AGG - chr1_2:49730589-49730608 Msa0074790:intron 40.0%
TTTGCTAACAAGTGCCCTAA+GGG + chr1_2:49730607-49730626 None:intergenic 40.0%
! TTTTGCTAACAAGTGCCCTA+AGG + chr1_2:49730608-49730627 None:intergenic 40.0%
! AACGTGACACAGATTAGTTG+AGG + chr1_2:49730814-49730833 None:intergenic 40.0%
CGTTGTAGCCATACTACATA+CGG - chr1_2:49730830-49730849 Msa0074790:intron 40.0%
GTGTAACTCCGTATGTAGTA+TGG + chr1_2:49730841-49730860 None:intergenic 40.0%
AACAATGCAGGGAGAAATGA+GGG + chr1_2:49730969-49730988 None:intergenic 40.0%
AAACAATGCAGGGAGAAATG+AGG + chr1_2:49730970-49730989 None:intergenic 40.0%
CCAAAAGCTTCAAACAATGC+AGG + chr1_2:49730981-49731000 None:intergenic 40.0%
!! CCTGCATTGTTTGAAGCTTT+TGG - chr1_2:49730978-49730997 Msa0074790:intron 40.0%
! GGATATTCGTAAGGTACTTG+AGG - chr1_2:49731013-49731032 Msa0074790:intron 40.0%
!! GTAAGGTACTTGAGGTCTTT+TGG - chr1_2:49731021-49731040 Msa0074790:intron 40.0%
TTCGGACAAATTCATCCAAC+TGG - chr1_2:49731143-49731162 Msa0074790:intron 40.0%
TTCATCCAACTGGAGATTAG+GGG - chr1_2:49731153-49731172 Msa0074790:intron 40.0%
!! TGTGTATGGTTTTGCAACCA+TGG - chr1_2:49731176-49731195 Msa0074790:intron 40.0%
CAAATATGCCACAGGCATTT+AGG + chr1_2:49731271-49731290 None:intergenic 40.0%
CTAAATGCCTGTGGCATATT+TGG - chr1_2:49731269-49731288 Msa0074790:intron 40.0%
TTAAGTGCCAAATATGCCAC+AGG + chr1_2:49731279-49731298 None:intergenic 40.0%
TAGCATCCCTACTTGAAACT+TGG - chr1_2:49731321-49731340 Msa0074790:intron 40.0%
AGCATCCCTACTTGAAACTT+GGG - chr1_2:49731322-49731341 Msa0074790:intron 40.0%
!!! GACTGTTGTTTTCTGTCTAG+TGG - chr1_2:49731531-49731550 Msa0074790:intron 40.0%
CTGCTTAGTCCTTCCAAATA+TGG + chr1_2:49731589-49731608 None:intergenic 40.0%
AAGCAGCACACAATTGAAGT+TGG - chr1_2:49731603-49731622 Msa0074790:intron 40.0%
CAAATCGAATCTCACATGCA+AGG - chr1_2:49731638-49731657 Msa0074790:intron 40.0%
! TATCGATTAGCAGGTTCACT+GGG - chr1_2:49731684-49731703 Msa0074790:intron 40.0%
TTCACTGGGTAGTACATTTG+TGG - chr1_2:49731698-49731717 Msa0074790:intron 40.0%
TCACTGGGTAGTACATTTGT+GGG - chr1_2:49731699-49731718 Msa0074790:intron 40.0%
GACACTCATCTTAAGGGAAA+AGG + chr1_2:49731840-49731859 None:intergenic 40.0%
! ATCACTCGTCGATTGTTGCT+TGG - chr1_2:49717177-49717196 Msa0074790:three_prime_UTR 45.0%
! TAGTAGTTTTCGCGTTTCGC+AGG - chr1_2:49717213-49717232 Msa0074790:three_prime_UTR 45.0%
! AGTAGTTTTCGCGTTTCGCA+GGG - chr1_2:49717214-49717233 Msa0074790:three_prime_UTR 45.0%
TCATTTCAACGCGCTTGTTC+CGG - chr1_2:49717291-49717310 Msa0074790:three_prime_UTR 45.0%
CTTCTAGCAGCATCTCTAAC+AGG + chr1_2:49717349-49717368 None:intergenic 45.0%
AAGACTCTTGCTCACTCTCA+TGG - chr1_2:49717366-49717385 Msa0074790:exon 45.0%
GCCCAGAAAGGTCATAAGTA+AGG + chr1_2:49718062-49718081 None:intergenic 45.0%
CAAATCATTCTCAAGCCTGC+TGG - chr1_2:49718264-49718283 Msa0074790:intron 45.0%
TATATATGTCTGTGGGGCAG+TGG - chr1_2:49718446-49718465 Msa0074790:intron 45.0%
TAGACCGATTGCAGATGTCA+CGG + chr1_2:49719289-49719308 None:intergenic 45.0%
CTACTGAACTACCCCTTCAA+CGG - chr1_2:49719316-49719335 Msa0074790:intron 45.0%
TACTGAACTACCCCTTCAAC+GGG - chr1_2:49719317-49719336 Msa0074790:intron 45.0%
AGGAAGAATAGCCCGTTGAA+GGG + chr1_2:49719331-49719350 None:intergenic 45.0%
TGCACAAAATAGCTGCTTCC+CGG + chr1_2:49719488-49719507 None:intergenic 45.0%
GAGGTAAGCATGTCTTATCC+CGG - chr1_2:49719510-49719529 Msa0074790:intron 45.0%
CAGGAAATGTATGCACAAGC+TGG - chr1_2:49719867-49719886 Msa0074790:intron 45.0%
! CATTTTGCACTGCACCACAA+TGG - chr1_2:49720078-49720097 Msa0074790:intron 45.0%
ACTAATTTCCTGCACAGTCC+TGG - chr1_2:49720406-49720425 Msa0074790:intron 45.0%
AATATGTTCCAGGACTGTGC+AGG + chr1_2:49720417-49720436 None:intergenic 45.0%
! TATTGTCGTGGTTCTGTGTC+TGG - chr1_2:49721096-49721115 Msa0074790:CDS 45.0%
CAGAGAAAATGTGGCTAACG+AGG + chr1_2:49721154-49721173 None:intergenic 45.0%
!! CCAGTCCTTTTCTGGTACAA+GGG + chr1_2:49721318-49721337 None:intergenic 45.0%
!! ACCAGTCCTTTTCTGGTACA+AGG + chr1_2:49721319-49721338 None:intergenic 45.0%
AAGACGTTCGATTCTCTGCA+GGG + chr1_2:49721357-49721376 None:intergenic 45.0%
!!! ATCGAACGTCTTGTTTTGGG+AGG - chr1_2:49721365-49721384 Msa0074790:CDS 45.0%
!!! AACGTCTTGTTTTGGGAGGT+TGG - chr1_2:49721369-49721388 Msa0074790:CDS 45.0%
TTTCCCTCTCTCTCTCGTTT+AGG - chr1_2:49721522-49721541 Msa0074790:CDS 45.0%
GTACCTAAACGAGAGAGAGA+GGG + chr1_2:49721528-49721547 None:intergenic 45.0%
TGTACCTAAACGAGAGAGAG+AGG + chr1_2:49721529-49721548 None:intergenic 45.0%
GGACATCTTTAACACGAGGT+TGG - chr1_2:49721570-49721589 Msa0074790:CDS 45.0%
!! TTAACACGAGGTTGGTGTGA+AGG - chr1_2:49721578-49721597 Msa0074790:CDS 45.0%
GTCGCAATTTAGACGACTAG+GGG + chr1_2:49721769-49721788 None:intergenic 45.0%
GGTCGCAATTTAGACGACTA+GGG + chr1_2:49721770-49721789 None:intergenic 45.0%
AGGTCGCAATTTAGACGACT+AGG + chr1_2:49721771-49721790 None:intergenic 45.0%
GTCGTCTAAATTGCGACCTT+TGG - chr1_2:49721772-49721791 Msa0074790:CDS 45.0%
CTGCAATGAAGGCAAACCAA+AGG + chr1_2:49721791-49721810 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG + chr1_2:49721814-49721833 None:intergenic 45.0%
CTCCAACACCTTCATTGTGT+TGG - chr1_2:49721812-49721831 Msa0074790:CDS 45.0%
! AGCCAACACAATGAAGGTGT+TGG + chr1_2:49721817-49721836 None:intergenic 45.0%
CCTCAAAGCCAACACAATGA+AGG + chr1_2:49721823-49721842 None:intergenic 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG - chr1_2:49721820-49721839 Msa0074790:CDS 45.0%
!! TCATTGTGTTGGCTTTGAGG+GGG - chr1_2:49721823-49721842 Msa0074790:CDS 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr1_2:49721892-49721911 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr1_2:49721889-49721908 Msa0074790:CDS 45.0%
ATAGGTCTGTGGGTGTTTGA+GGG - chr1_2:49721967-49721986 Msa0074790:CDS 45.0%
GGAGTCCTAAAACAGCTTGT+TGG - chr1_2:49722289-49722308 Msa0074790:CDS 45.0%
GCACACAACTATCTGATCGA+AGG - chr1_2:49722320-49722339 Msa0074790:CDS 45.0%
! TCAGAGCACCTGTTTCACAA+TGG + chr1_2:49722350-49722369 None:intergenic 45.0%
!! CAGACCCTGTTTTAGGCAAT+TGG - chr1_2:49722445-49722464 Msa0074790:CDS 45.0%
ATCCTCCTTTGAGCAAGCTT+AGG - chr1_2:49722507-49722526 Msa0074790:CDS 45.0%
! TCTAGAGCACTTGGTCATAG+AGG + chr1_2:49722576-49722595 None:intergenic 45.0%
CAAGACAGGCGAACATACTA+AGG + chr1_2:49722897-49722916 None:intergenic 45.0%
GAGAGGTTCAACATCATCTC+AGG + chr1_2:49723190-49723209 None:intergenic 45.0%
GCGTAGCATCTGGAAAATAG+AGG + chr1_2:49724132-49724151 None:intergenic 45.0%
CTTTGCAATTGCGTAGCATC+TGG + chr1_2:49724142-49724161 None:intergenic 45.0%
!! TTGCACGAAGTATTGCACTG+CGG + chr1_2:49724208-49724227 None:intergenic 45.0%
!! CGTTGTATTTCTGGTGCATC+AGG + chr1_2:49724340-49724359 None:intergenic 45.0%
! ACGATCAGCTGACTTATACG+AGG - chr1_2:49724357-49724376 Msa0074790:intron 45.0%
TGTTGTGTTTCGGACGCAAT+GGG - chr1_2:49724391-49724410 Msa0074790:intron 45.0%
GATGCAACTGCATTGCATGA+TGG + chr1_2:49724521-49724540 None:intergenic 45.0%
! TGTGTCTTATTGTCCATGCG+TGG - chr1_2:49724671-49724690 Msa0074790:CDS 45.0%
CTTATTGTCCATGCGTGGTA+AGG - chr1_2:49724676-49724695 Msa0074790:CDS 45.0%
AGGAATATGATGGCAAGGAG+TGG + chr1_2:49724901-49724920 None:intergenic 45.0%
CCGTAAGGAATATGATGGCA+AGG + chr1_2:49724906-49724925 None:intergenic 45.0%
CGACTCCGTAAGGAATATGA+TGG + chr1_2:49724911-49724930 None:intergenic 45.0%
!! TGACCAAATTGTTGGTGCCA+AGG - chr1_2:49725637-49725656 Msa0074790:intron 45.0%
CCTCTGAATAGAAGGGTCAA+AGG + chr1_2:49725774-49725793 None:intergenic 45.0%
CCTTTGACCCTTCTATTCAG+AGG - chr1_2:49725771-49725790 Msa0074790:intron 45.0%
GCACTTCTATCACGAATGGA+AGG + chr1_2:49725920-49725939 None:intergenic 45.0%
TGGTGCACTTCTATCACGAA+TGG + chr1_2:49725924-49725943 None:intergenic 45.0%
GCTTGACTGGAAGATGACAT+TGG + chr1_2:49725944-49725963 None:intergenic 45.0%
ACTGCATGCAAGCAAACAGA+AGG - chr1_2:49726117-49726136 Msa0074790:intron 45.0%
! GCTATTGAGAGCATGCTTAG+AGG - chr1_2:49726145-49726164 Msa0074790:intron 45.0%
! TGCTCTGCGATCTTCAAGTT+TGG - chr1_2:49726198-49726217 Msa0074790:intron 45.0%
! TCTCTTATTTCCCCTAGTGC+AGG - chr1_2:49726349-49726368 Msa0074790:intron 45.0%
TGACTCTGTTGTTAAAGGGG+TGG + chr1_2:49726440-49726459 None:intergenic 45.0%
CCAGGTGACTCTGTTGTTAA+AGG + chr1_2:49726445-49726464 None:intergenic 45.0%
CCTTTAACAACAGAGTCACC+TGG - chr1_2:49726442-49726461 Msa0074790:intron 45.0%
AACAACAGAGTCACCTGGTT+TGG - chr1_2:49726447-49726466 Msa0074790:intron 45.0%
ACAACAGAGTCACCTGGTTT+GGG - chr1_2:49726448-49726467 Msa0074790:intron 45.0%
AATAGAGGCAGTATCCGGAA+CGG - chr1_2:49726475-49726494 Msa0074790:intron 45.0%
CTGAACTAAGTCCTTCACTC+AGG + chr1_2:49726915-49726934 None:intergenic 45.0%
CTGAGTGAAGGACTTAGTTC+AGG - chr1_2:49726913-49726932 Msa0074790:intron 45.0%
! GACTTAGTTCAGGTTCTGAC+TGG - chr1_2:49726923-49726942 Msa0074790:intron 45.0%
GTAATTGAAGGCAGAAACCC+TGG + chr1_2:49726953-49726972 None:intergenic 45.0%
CTTGCTCCAATAACGAGTGA+AGG + chr1_2:49726975-49726994 None:intergenic 45.0%
CTTCACTCGTTATTGGAGCA+AGG - chr1_2:49726973-49726992 Msa0074790:intron 45.0%
! CCGCATGTGCGATTTTATGA+TGG + chr1_2:49727074-49727093 None:intergenic 45.0%
ACATGCCGAAAGCCATTTGA+AGG - chr1_2:49727123-49727142 Msa0074790:intron 45.0%
! TTGACCCCAAAGAGCTTGTT+AGG - chr1_2:49727187-49727206 Msa0074790:intron 45.0%
CTTGCCTAACAAGCTCTTTG+GGG + chr1_2:49727194-49727213 None:intergenic 45.0%
GCTTGCCTAACAAGCTCTTT+GGG + chr1_2:49727195-49727214 None:intergenic 45.0%
TGCTTGCCTAACAAGCTCTT+TGG + chr1_2:49727196-49727215 None:intergenic 45.0%
TCAAGAGAACGTAGCAATGC+GGG + chr1_2:49727273-49727292 None:intergenic 45.0%
GTCAAGAGAACGTAGCAATG+CGG + chr1_2:49727274-49727293 None:intergenic 45.0%
TGACGAACAAAGGTCTCCAA+AGG - chr1_2:49727290-49727309 Msa0074790:intron 45.0%
AAGCATGCAATGAATCCGGA+AGG - chr1_2:49727354-49727373 Msa0074790:intron 45.0%
CCAATATTTGCAGCACCTTC+CGG + chr1_2:49727372-49727391 None:intergenic 45.0%
GTGAACTAATGGGGCTAACT+TGG + chr1_2:49727415-49727434 None:intergenic 45.0%
! TGTAGGAACATCCTCTGAAG+AGG - chr1_2:49727665-49727684 Msa0074790:intron 45.0%
! GTAGGAACATCCTCTGAAGA+GGG - chr1_2:49727666-49727685 Msa0074790:intron 45.0%
! TCCTCTGAAGAGGGATATGT+TGG - chr1_2:49727675-49727694 Msa0074790:intron 45.0%
ACCAACATATCCCTCTTCAG+AGG + chr1_2:49727679-49727698 None:intergenic 45.0%
GGTGGTTCTCTAGATAGTGA+TGG - chr1_2:49727735-49727754 Msa0074790:CDS 45.0%
GGTTCTCTAGATAGTGATGG+TGG - chr1_2:49727738-49727757 Msa0074790:CDS 45.0%
!! ATAGTGATGGTGGCAGGAAA+TGG - chr1_2:49727748-49727767 Msa0074790:CDS 45.0%
AACCTGATTAAAGCCAGTCG+TGG - chr1_2:49727786-49727805 Msa0074790:CDS 45.0%
TGAAGGTTTGCCATCTGATG+TGG - chr1_2:49727983-49728002 Msa0074790:intron 45.0%
GTCAACCACATGACAAACAC+AGG - chr1_2:49728107-49728126 Msa0074790:intron 45.0%
TGAGTCCTGTGTTTGTCATG+TGG + chr1_2:49728115-49728134 None:intergenic 45.0%
GTCTGTGTAGATATGCAGTG+GGG - chr1_2:49728450-49728469 Msa0074790:intron 45.0%
TCTGTGTAGATATGCAGTGG+GGG - chr1_2:49728451-49728470 Msa0074790:intron 45.0%
GATATTGACCGTTGTGCTTG+AGG - chr1_2:49729598-49729617 Msa0074790:intron 45.0%
AAGAGCAAGCTCTCTGATTG+AGG + chr1_2:49729642-49729661 None:intergenic 45.0%
GCACAAAAGGAGTAAGAACC+TGG + chr1_2:49729691-49729710 None:intergenic 45.0%
TATCCCGATATGCCCACAAA+AGG + chr1_2:49729773-49729792 None:intergenic 45.0%
TCTTCAGGTCTCAAACGAAG+CGG - chr1_2:49729984-49730003 Msa0074790:intron 45.0%
TCAGGTCATTATCCCTCTAC+TGG - chr1_2:49730165-49730184 Msa0074790:intron 45.0%
! GACTAGAGTTTTCTCGTCCT+CGG + chr1_2:49730194-49730213 None:intergenic 45.0%
!! TGCCCTAAGGGCATTGTTTA+AGG + chr1_2:49730595-49730614 None:intergenic 45.0%
! GTGACACAGATTAGTTGAGG+AGG + chr1_2:49730811-49730830 None:intergenic 45.0%
!! AGCTTTTGGAAACCAGAGTG+CGG - chr1_2:49730992-49731011 Msa0074790:intron 45.0%
ACCATGGTTTGAGCGAAAGT+TGG - chr1_2:49731192-49731211 Msa0074790:intron 45.0%
ACCAACTTTCGCTCAAACCA+TGG + chr1_2:49731196-49731215 None:intergenic 45.0%
! CATTTAGGGTGTGCTCAGTT+TGG + chr1_2:49731256-49731275 None:intergenic 45.0%
! TGATGCTGCTATCGATTAGC+AGG - chr1_2:49731675-49731694 Msa0074790:intron 45.0%
! CTATCGATTAGCAGGTTCAC+TGG - chr1_2:49731683-49731702 Msa0074790:intron 45.0%
! GAGTGTCAGATTTGGAGTGT+TGG - chr1_2:49731853-49731872 Msa0074790:CDS 45.0%
!! TGTCAGATTTGGAGTGTTGG+CGG - chr1_2:49731856-49731875 Msa0074790:CDS 45.0%
ATGATCGCCGGAGAGAACAA+CGG + chr1_2:49717263-49717282 None:intergenic 50.0%
TTGTTCCGGCGGTTGTTGAT+CGG - chr1_2:49717305-49717324 Msa0074790:three_prime_UTR 50.0%
ACTCTTGCTCACTCTCATGG+AGG - chr1_2:49717369-49717388 Msa0074790:CDS 50.0%
CTGCATGACAAAGCCCAGAA+AGG + chr1_2:49718074-49718093 None:intergenic 50.0%
! TGGGCTTTGTCATGCAGCTA+TGG - chr1_2:49718077-49718096 Msa0074790:CDS 50.0%
CTAACCATGTAACAGCCAGC+AGG + chr1_2:49718282-49718301 None:intergenic 50.0%
! CAGTGGTGGGGATAGGAATT+AGG - chr1_2:49718463-49718482 Msa0074790:intron 50.0%
ACAAAAACAGGCCCAAGAGG+AGG + chr1_2:49719081-49719100 None:intergenic 50.0%
GCAACAAAAACAGGCCCAAG+AGG + chr1_2:49719084-49719103 None:intergenic 50.0%
! AAAGAGCGGGGTCTTTTGCT+TGG - chr1_2:49719223-49719242 Msa0074790:intron 50.0%
CGAACCGTGACATCTGCAAT+CGG - chr1_2:49719282-49719301 Msa0074790:intron 50.0%
GGAAGAATAGCCCGTTGAAG+GGG + chr1_2:49719330-49719349 None:intergenic 50.0%
GAGGAAGAATAGCCCGTTGA+AGG + chr1_2:49719332-49719351 None:intergenic 50.0%
CACTGCACCACAATGGTTTC+AGG - chr1_2:49720085-49720104 Msa0074790:intron 50.0%
GAAGGTGATGTCACCGAGAA+AGG - chr1_2:49721227-49721246 Msa0074790:CDS 50.0%
CCCTTGTACCAGAAAAGGAC+TGG - chr1_2:49721315-49721334 Msa0074790:CDS 50.0%
!! CGTACTGACCAGTCCTTTTC+TGG + chr1_2:49721326-49721345 None:intergenic 50.0%
CAAGACGTTCGATTCTCTGC+AGG + chr1_2:49721358-49721377 None:intergenic 50.0%
AGAGGGGGGGGGAAAAAAAT+TGG + chr1_2:49721451-49721470 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+GGG + chr1_2:49721467-49721486 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + chr1_2:49721468-49721487 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr1_2:49721467-49721486 None:intergenic 50.0%
GCAATTTAGACGACTAGGGG+CGG + chr1_2:49721766-49721785 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr1_2:49721887-49721906 None:intergenic 50.0%
CTCAAACACCCACAGACCTA+TGG + chr1_2:49721968-49721987 None:intergenic 50.0%
CATAGGTCTGTGGGTGTTTG+AGG - chr1_2:49721966-49721985 Msa0074790:CDS 50.0%
TAGGTCTGTGGGTGTTTGAG+GGG - chr1_2:49721968-49721987 Msa0074790:CDS 50.0%
GCTCAAAGGAGGATTGAGCA+AGG + chr1_2:49722501-49722520 None:intergenic 50.0%
! CTAGGCCTAAGCTTGCTCAA+AGG + chr1_2:49722515-49722534 None:intergenic 50.0%
AAGTTGCTCGTGTGCTTCCT+CGG - chr1_2:49724159-49724178 Msa0074790:intron 50.0%
GCAGTGCAATACTTCGTGCA+AGG - chr1_2:49724207-49724226 Msa0074790:intron 50.0%
GTGTTGTGTTTCGGACGCAA+TGG - chr1_2:49724390-49724409 Msa0074790:intron 50.0%
TTCACGACACAACTCCCTCT+TGG + chr1_2:49724871-49724890 None:intergenic 50.0%
GGTTGTTGACATACTCCCTC+CGG - chr1_2:49725461-49725480 Msa0074790:intron 50.0%
TTGGGGACTTCTATCTCCTC+TGG - chr1_2:49726034-49726053 Msa0074790:intron 50.0%
! TGAGAGCATGCTTAGAGGCT+TGG - chr1_2:49726150-49726169 Msa0074790:intron 50.0%
AATGGGGGATCACGAGATGA+GGG + chr1_2:49726385-49726404 None:intergenic 50.0%
TGAAACAGCAGCAGGGAATG+GGG + chr1_2:49726401-49726420 None:intergenic 50.0%
CTGAAACAGCAGCAGGGAAT+GGG + chr1_2:49726402-49726421 None:intergenic 50.0%
TAGAGGCTGAAACAGCAGCA+GGG + chr1_2:49726408-49726427 None:intergenic 50.0%
TTAGAGGCTGAAACAGCAGC+AGG + chr1_2:49726409-49726428 None:intergenic 50.0%
AGGGGTGGTCAGATGATTAG+AGG + chr1_2:49726425-49726444 None:intergenic 50.0%
GCGTCAATAGAGGCAGTATC+CGG - chr1_2:49726470-49726489 Msa0074790:intron 50.0%
AGTATCCGGAACGGTGGTAT+GGG - chr1_2:49726484-49726503 Msa0074790:intron 50.0%
ACAAACCCATACCACCGTTC+CGG + chr1_2:49726492-49726511 None:intergenic 50.0%
ACAGTTACATCCGGGAGACT+AGG - chr1_2:49726662-49726681 Msa0074790:intron 50.0%
TCATATACCGCCTAGTCTCC+CGG + chr1_2:49726675-49726694 None:intergenic 50.0%
GCGGTATATGAACCCCAATG+TGG - chr1_2:49726684-49726703 Msa0074790:intron 50.0%
GCGTGTCTTCTGGTAGAAGA+AGG - chr1_2:49726815-49726834 Msa0074790:intron 50.0%
AGGGCTTCATGAAGAGATGC+TGG + chr1_2:49726895-49726914 None:intergenic 50.0%
CTTCATGAAGCCCTGAGTGA+AGG - chr1_2:49726901-49726920 Msa0074790:intron 50.0%
GCAAGCATGCTCTACGACTT+TGG - chr1_2:49727209-49727228 Msa0074790:intron 50.0%
AGCATGCTCTACGACTTTGG+AGG - chr1_2:49727212-49727231 Msa0074790:intron 50.0%
! TCTACGACTTTGGAGGCTGT+GGG - chr1_2:49727219-49727238 Msa0074790:intron 50.0%
!! CCGGAAGGTGCTGCAAATAT+TGG - chr1_2:49727369-49727388 Msa0074790:intron 50.0%
!! CTCTAGATAGTGATGGTGGC+AGG - chr1_2:49727742-49727761 Msa0074790:CDS 50.0%
CAGTTTCATCCGAAGCTGGT+TGG + chr1_2:49727812-49727831 None:intergenic 50.0%
ACCAGCTTCGGATGAAACTG+AGG - chr1_2:49727812-49727831 Msa0074790:CDS 50.0%
TCCTCAGTTTCATCCGAAGC+TGG + chr1_2:49727816-49727835 None:intergenic 50.0%
TCAGTCAGCTGAAGACGTGA+AGG - chr1_2:49728085-49728104 Msa0074790:intron 50.0%
TTCAACCTCGTCAGCAGAGA+TGG - chr1_2:49728331-49728350 Msa0074790:intron 50.0%
TAGATATGCAGTGGGGGTGA+TGG - chr1_2:49728457-49728476 Msa0074790:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr1_2:49721467-49721486 None:intergenic 50.0%
ATCCAGCACCTCAAGCACAA+CGG + chr1_2:49729609-49729628 None:intergenic 50.0%
! TATCCCTCTACTGGTTACCG+AGG - chr1_2:49730174-49730193 Msa0074790:intron 50.0%
TTTCCCTTCAGATTGTGGGG+CGG - chr1_2:49730913-49730932 Msa0074790:intron 50.0%
CCTTACGAATATCCGCACTC+TGG + chr1_2:49731007-49731026 None:intergenic 50.0%
CCAGAGTGCGGATATTCGTA+AGG - chr1_2:49731004-49731023 Msa0074790:intron 50.0%
ACACACCCCTAATCTCCAGT+TGG + chr1_2:49731161-49731180 None:intergenic 50.0%
! CTGGAGATTAGGGGTGTGTA+TGG - chr1_2:49731162-49731181 Msa0074790:intron 50.0%
CGAATCTCACATGCAAGGAC+AGG - chr1_2:49731643-49731662 Msa0074790:intron 50.0%
GAAGGACGCAAAGGAACGCA+TGG - chr1_2:49717087-49717106 Msa0074790:three_prime_UTR 55.0%
ACGCAAAGGAACGCATGGCA+GGG - chr1_2:49717092-49717111 Msa0074790:three_prime_UTR 55.0%
TTTCAACGCGCTTGTTCCGG+CGG - chr1_2:49717294-49717313 Msa0074790:three_prime_UTR 55.0%
GTTGTTGATCGGTTGGGGGA+TGG - chr1_2:49717316-49717335 Msa0074790:three_prime_UTR 55.0%
! CAAGCCTGCTGGCTGTTACA+TGG - chr1_2:49718275-49718294 Msa0074790:intron 55.0%
ATATGTCTGTGGGGCAGTGG+TGG - chr1_2:49718449-49718468 Msa0074790:intron 55.0%
TATGTCTGTGGGGCAGTGGT+GGG - chr1_2:49718450-49718469 Msa0074790:intron 55.0%
! CAGCGGGCTTGAGAGTGATT+TGG + chr1_2:49718544-49718563 None:intergenic 55.0%
TCGTCATCCATGCCTCCTCT+TGG - chr1_2:49719066-49719085 Msa0074790:intron 55.0%
CGTCATCCATGCCTCCTCTT+GGG - chr1_2:49719067-49719086 Msa0074790:intron 55.0%
CCAAAGAAGAAGGGAGGTCG+TGG + chr1_2:49719920-49719939 None:intergenic 55.0%
CCACGACCTCCCTTCTTCTT+TGG - chr1_2:49719917-49719936 Msa0074790:intron 55.0%
AGAGAGAGAGAGAGAGAGGG+GGG + chr1_2:49721465-49721484 None:intergenic 55.0%
GAGAGAGAGAGAGAGAGAGG+GGG + chr1_2:49721466-49721485 None:intergenic 55.0%
!! CTAGGGGCGGACTGCAATTA+AGG + chr1_2:49721753-49721772 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG + chr1_2:49721802-49721821 None:intergenic 55.0%
!! GTGTTGGCTTTGAGGGGGAT+AGG - chr1_2:49721828-49721847 Msa0074790:CDS 55.0%
GCACTCCTCACCTTACAAGC+CGG - chr1_2:49721879-49721898 Msa0074790:CDS 55.0%
! GGCCTAAGCTTGCTCAAAGG+AGG + chr1_2:49722512-49722531 None:intergenic 55.0%
GTTGGGTGGGGGAGCTTATA+TGG - chr1_2:49723042-49723061 Msa0074790:CDS 55.0%
TTACGTCACCCGACTCCGTA+AGG + chr1_2:49724921-49724940 None:intergenic 55.0%
GATAGGTGCGGTCAACTGCA+AGG - chr1_2:49725690-49725709 Msa0074790:intron 55.0%
AGGGTCAACTCCTGCACTAG+GGG + chr1_2:49726362-49726381 None:intergenic 55.0%
GAGGGTCAACTCCTGCACTA+GGG + chr1_2:49726363-49726382 None:intergenic 55.0%
GAATGGGGGATCACGAGATG+AGG + chr1_2:49726386-49726405 None:intergenic 55.0%
GAAACAGCAGCAGGGAATGG+GGG + chr1_2:49726400-49726419 None:intergenic 55.0%
GCTGAAACAGCAGCAGGGAA+TGG + chr1_2:49726403-49726422 None:intergenic 55.0%
CCTCTATTGACGCCCAAACC+AGG + chr1_2:49726463-49726482 None:intergenic 55.0%
!! CCTGGTTTGGGCGTCAATAG+AGG - chr1_2:49726460-49726479 Msa0074790:intron 55.0%
CAGTATCCGGAACGGTGGTA+TGG - chr1_2:49726483-49726502 Msa0074790:intron 55.0%
GTTACATCCGGGAGACTAGG+CGG - chr1_2:49726665-49726684 Msa0074790:intron 55.0%
!! AGGTTCTGACTGGTCTGCCA+GGG - chr1_2:49726933-49726952 Msa0074790:intron 55.0%
! CTCTACGACTTTGGAGGCTG+TGG - chr1_2:49727218-49727237 Msa0074790:intron 55.0%
ACGTAGCAATGCGGGCAAGA+GGG + chr1_2:49727265-49727284 None:intergenic 55.0%
AACGTAGCAATGCGGGCAAG+AGG + chr1_2:49727266-49727285 None:intergenic 55.0%
!! GGCCACGACTGGCTTTAATC+AGG + chr1_2:49727791-49727810 None:intergenic 55.0%
GGCTTTCAAGCTGACCGACT+TGG - chr1_2:49727936-49727955 Msa0074790:intron 55.0%
!! AGCTGACCGACTTGGATACG+TGG - chr1_2:49727944-49727963 Msa0074790:intron 55.0%
CAAAGCCATCTCTGCTGACG+AGG + chr1_2:49728339-49728358 None:intergenic 55.0%
CGTCCTCGGTAACCAGTAGA+GGG + chr1_2:49730180-49730199 None:intergenic 55.0%
TCGTCCTCGGTAACCAGTAG+AGG + chr1_2:49730181-49730200 None:intergenic 55.0%
GCTCTCTCAGGAGGAACTGA+TGG - chr1_2:49730935-49730954 Msa0074790:intron 55.0%
GAGCACACCCTAAATGCCTG+TGG - chr1_2:49731260-49731279 Msa0074790:intron 55.0%
!! CAGATTTGGAGTGTTGGCGG+TGG - chr1_2:49731859-49731878 Msa0074790:CDS 55.0%
!! GGAGTGTTGGCGGTGGAATA+CGG - chr1_2:49731866-49731885 Msa0074790:CDS 55.0%
ACTGGAACTAGCACGCGCGA+AGG - chr1_2:49717069-49717088 Msa0074790:three_prime_UTR 60.0%
GACGCAAAGGAACGCATGGC+AGG - chr1_2:49717091-49717110 Msa0074790:three_prime_UTR 60.0%
CGCAAAGGAACGCATGGCAG+GGG - chr1_2:49717093-49717112 Msa0074790:three_prime_UTR 60.0%
GCAGGGTGCGCTTCAAGCAT+TGG - chr1_2:49717231-49717250 Msa0074790:three_prime_UTR 60.0%
GCTTCCGCCGTTGTTCTCTC+CGG - chr1_2:49717253-49717272 Msa0074790:three_prime_UTR 60.0%
ATCGCCGGAGAGAACAACGG+CGG + chr1_2:49717260-49717279 None:intergenic 60.0%
TCCGGCGGTTGTTGATCGGT+TGG - chr1_2:49717309-49717328 Msa0074790:three_prime_UTR 60.0%
CCCAACCGATCAACAACCGC+CGG + chr1_2:49717313-49717332 None:intergenic 60.0%
CCGGCGGTTGTTGATCGGTT+GGG - chr1_2:49717310-49717329 Msa0074790:three_prime_UTR 60.0%
CGGCGGTTGTTGATCGGTTG+GGG - chr1_2:49717311-49717330 Msa0074790:three_prime_UTR 60.0%
GGCGGTTGTTGATCGGTTGG+GGG - chr1_2:49717312-49717331 Msa0074790:three_prime_UTR 60.0%
ATGTCTGTGGGGCAGTGGTG+GGG - chr1_2:49718451-49718470 Msa0074790:intron 60.0%
AACAGGCCCAAGAGGAGGCA+TGG + chr1_2:49719076-49719095 None:intergenic 60.0%
GCGATCCCAATCCTGCTGTC+CGG - chr1_2:49719466-49719485 Msa0074790:intron 60.0%
CGATCCCAATCCTGCTGTCC+GGG - chr1_2:49719467-49719486 Msa0074790:intron 60.0%
GCTTCCCGGACAGCAGGATT+GGG + chr1_2:49719474-49719493 None:intergenic 60.0%
TGCTTCCCGGACAGCAGGAT+TGG + chr1_2:49719475-49719494 None:intergenic 60.0%
ATAGCTGCTTCCCGGACAGC+AGG + chr1_2:49719480-49719499 None:intergenic 60.0%
AGAGAGAGAGAGAGAGGGGG+GGG + chr1_2:49721463-49721482 None:intergenic 60.0%
GAGAGAGAGAGAGAGAGGGG+GGG + chr1_2:49721464-49721483 None:intergenic 60.0%
!! GGGGCGGACTGCAATTAAGG+CGG + chr1_2:49721750-49721769 None:intergenic 60.0%
TGTTTCGGACGCAATGGGCG+AGG - chr1_2:49724396-49724415 Msa0074790:intron 60.0%
AATAGGCGACGGGAACGCTC+CGG + chr1_2:49725746-49725765 None:intergenic 60.0%
GGAGGGTCAACTCCTGCACT+AGG + chr1_2:49726364-49726383 None:intergenic 60.0%
GGGGATCACGAGATGAGGGA+GGG + chr1_2:49726381-49726400 None:intergenic 60.0%
AGAGGCAGTATCCGGAACGG+TGG - chr1_2:49726478-49726497 Msa0074790:intron 60.0%
GTAGCTGCACGCGTGTCTTC+TGG - chr1_2:49726805-49726824 Msa0074790:intron 60.0%
!! CAGGTTCTGACTGGTCTGCC+AGG - chr1_2:49726932-49726951 Msa0074790:intron 60.0%
! GCGAGGGGTGCGCTGTTTAA+GGG + chr1_2:49727568-49727587 None:intergenic 60.0%
! TGCGAGGGGTGCGCTGTTTA+AGG + chr1_2:49727569-49727588 None:intergenic 60.0%
CAGTCGTGGCCAACCAGCTT+CGG - chr1_2:49727800-49727819 Msa0074790:CDS 60.0%
GACCGTTGTGCTTGAGGTGC+TGG - chr1_2:49729604-49729623 Msa0074790:intron 60.0%
GAGCCGCCCCACAATCTGAA+GGG + chr1_2:49730919-49730938 None:intergenic 60.0%
AGAGCCGCCCCACAATCTGA+AGG + chr1_2:49730920-49730939 None:intergenic 60.0%
AGCACGCGCGAAGGACGCAA+AGG - chr1_2:49717078-49717097 Msa0074790:three_prime_UTR 65.0%
! TGTGGGGCAGTGGTGGGGAT+AGG - chr1_2:49718456-49718475 Msa0074790:intron 65.0%
GAGAGAGAGAGAGAGGGGGG+GGG + chr1_2:49721462-49721481 None:intergenic 65.0%
GGGGGATCACGAGATGAGGG+AGG + chr1_2:49726382-49726401 None:intergenic 65.0%
! CGAAGCTGGTTGGCCACGAC+TGG + chr1_2:49727802-49727821 None:intergenic 65.0%
GATTGTGGGGCGGCTCTCTC+AGG - chr1_2:49730923-49730942 Msa0074790:intron 65.0%
TGTGGGGCGGCTCTCTCAGG+AGG - chr1_2:49730926-49730945 Msa0074790:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 49717058 49732004 49717058 ID=Msa0074790;Name=Msa0074790
chr1_2 mRNA 49717058 49732004 49717058 ID=Msa0074790-mRNA-1;Parent=Msa0074790;Name=Msa0074790-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.85|0.86|0.95|1|1|22|311|1440
chr1_2 exon 49717058 49717530 49717058 ID=Msa0074790-mRNA-1:exon:15223;Parent=Msa0074790-mRNA-1
chr1_2 exon 49718037 49718138 49718037 ID=Msa0074790-mRNA-1:exon:15222;Parent=Msa0074790-mRNA-1
chr1_2 exon 49718825 49718893 49718825 ID=Msa0074790-mRNA-1:exon:15221;Parent=Msa0074790-mRNA-1
chr1_2 exon 49719003 49719071 49719003 ID=Msa0074790-mRNA-1:exon:15220;Parent=Msa0074790-mRNA-1
chr1_2 exon 49719157 49719231 49719157 ID=Msa0074790-mRNA-1:exon:15219;Parent=Msa0074790-mRNA-1
chr1_2 exon 49719371 49719475 49719371 ID=Msa0074790-mRNA-1:exon:15218;Parent=Msa0074790-mRNA-1
chr1_2 exon 49720513 49720602 49720513 ID=Msa0074790-mRNA-1:exon:15217;Parent=Msa0074790-mRNA-1
chr1_2 exon 49720905 49722691 49720905 ID=Msa0074790-mRNA-1:exon:15216;Parent=Msa0074790-mRNA-1
chr1_2 exon 49722836 49723190 49722836 ID=Msa0074790-mRNA-1:exon:15215;Parent=Msa0074790-mRNA-1
chr1_2 exon 49723269 49723367 49723269 ID=Msa0074790-mRNA-1:exon:15214;Parent=Msa0074790-mRNA-1
chr1_2 exon 49724645 49724762 49724645 ID=Msa0074790-mRNA-1:exon:15213;Parent=Msa0074790-mRNA-1
chr1_2 exon 49724834 49724919 49724834 ID=Msa0074790-mRNA-1:exon:15212;Parent=Msa0074790-mRNA-1
chr1_2 exon 49725003 49725071 49725003 ID=Msa0074790-mRNA-1:exon:15211;Parent=Msa0074790-mRNA-1
chr1_2 exon 49725150 49725224 49725150 ID=Msa0074790-mRNA-1:exon:15210;Parent=Msa0074790-mRNA-1
chr1_2 exon 49726702 49726799 49726702 ID=Msa0074790-mRNA-1:exon:15209;Parent=Msa0074790-mRNA-1
chr1_2 exon 49727676 49727837 49727676 ID=Msa0074790-mRNA-1:exon:15208;Parent=Msa0074790-mRNA-1
chr1_2 exon 49728790 49728955 49728790 ID=Msa0074790-mRNA-1:exon:15207;Parent=Msa0074790-mRNA-1
chr1_2 exon 49729124 49729192 49729124 ID=Msa0074790-mRNA-1:exon:15206;Parent=Msa0074790-mRNA-1
chr1_2 exon 49729550 49729612 49729550 ID=Msa0074790-mRNA-1:exon:15205;Parent=Msa0074790-mRNA-1
chr1_2 exon 49729709 49729864 49729709 ID=Msa0074790-mRNA-1:exon:15204;Parent=Msa0074790-mRNA-1
chr1_2 exon 49731340 49731407 49731340 ID=Msa0074790-mRNA-1:exon:15203;Parent=Msa0074790-mRNA-1
chr1_2 exon 49731725 49732004 49731725 ID=Msa0074790-mRNA-1:exon:15202;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49731725 49732004 49731725 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49731340 49731407 49731340 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49729709 49729864 49729709 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49729550 49729612 49729550 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49729124 49729192 49729124 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49728790 49728955 49728790 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49727676 49727837 49727676 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49726702 49726799 49726702 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49725150 49725224 49725150 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49725003 49725071 49725003 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49724834 49724919 49724834 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49724645 49724762 49724645 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49723269 49723367 49723269 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49722836 49723190 49722836 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49720905 49722691 49720905 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49720513 49720602 49720513 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49719371 49719475 49719371 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49719157 49719231 49719157 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49719003 49719071 49719003 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49718825 49718893 49718825 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49718037 49718138 49718037 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 CDS 49717369 49717530 49717369 ID=Msa0074790-mRNA-1:cds;Parent=Msa0074790-mRNA-1
chr1_2 three_prime_UTR 49717058 49717368 49717058 ID=Msa0074790-mRNA-1:three_prime_utr;Parent=Msa0074790-mRNA-1
Gene Sequence

>Msa0074790

ATGGAGGAAGCACTGGAACTAGCACGCGCGAAGGACGCAAAGGAACGCATGGCAGGGGTAGAGCGTCTCCACCAAGTTCTAGAAGCTTCTAGAAAAACTCTAAGTTCAACCGAAGTTTCATCACTCGTCGATTGTTGCTTGGATCTCTTGAAGGATAGTAGTTTTCGCGTTTCGCAGGGTGCGCTTCAAGCATTGGCTTCCGCCGTTGTTCTCTCCGGCGATCATTTTAAGCTTCATTTCAACGCGCTTGTTCCGGCGGTTGTTGATCGGTTGGGGGATGGAATCTGCGTTTGGATTAGGAAAGTGAAAAGTAAGTGTTTGAGTGATAAGGATGAAAAACTGATAAAGGTTTCGTCTCCTACAATAATTGTTGAAAGAGCGGGGTCTTTTGCTTGGACATGCAAAAACTGGAGAGTCAGAGAAGAGTTTGCACGAACCGTGACATCTGCAATCGGTCTATTTTCATCTACTGAACTACCCCTTCAACGGGCTATTCTTCCTCCTACTTTGCAATTGCTGAGCGATCCCAATCCTGCTGTCCGGGAAGCAGCTATTTTGTGCATTGAGGAAATGTATGCACAAGCTGGGTCTCAATTTCGTGATGAACTTCAGCGCCACGACCTCCCTTCTTCTTTGGTGAAATATATTAATGCTAGGCTAGAGGGGATTCAACCAAAAGCTCAGTCTTCAAATGGTATCTCTAGTGGTTATATCACTGGAGAAATGAATCCTTTGAATGCTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAAGGAGACATCTCTTTTTGGAGGAGAAGGTGATGTCACCGAGAAAGGCATTGAACCTATCAAGGTGTATTCGGAGAAGGAATTCATCAGGGAAATCGAGAAGATTGTATCTACCCTTGTACCAGAAAAGGACTGGTCAGTACGAATTACTGCCCTGCAGAGAATCGAACGTCTTGTTTTGGGAGGAGCTGCTGATTATCCGTGTTTTTTTGGAGTCCTAAAACAGCTTGTTGGACCATTAAGCACACAACTATCTGATCGAAGGTCTACCATTGTGAAACAGGCATGCCATCTGTTATGTTTTTTGTCGAAAGACCTCTTGGGTGATTTTGAAGCATGTGCTGAAATGTTCATACCAGTTCTTTTGAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGCTACGCAATTGCAAAGTTGCTCGTGTGCTTCCTCGGATAGTTGATTGTGCAAAAAGTGACCGCAGTGCAATACTTCGTGCAAGGTGCTGTGATTATGCTCTTTTGATACTAGAACATTGGCCTGATGCACCAGAAATACAACGATCAGCTGACTTATACGAGGATATGATAAGGTGTTGTGTTTCGGACGCAATGGGCGAGGTGCGGTCAACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCGGAGCGTTCCCGTCGCCTATTTTCATCCTTTGACCCTTCTATTCAGAGGTTAATAAATGAAGAAGATGGAGGCAAACATAGGCGACATGCATCGCCTTCCATTCGTGATAGAAGTGCACCAATGTCATCTTCCAGTCAAGCTTCAACTCCTAATCTATCTGGTTATGGAACTTCAGCTATTGTTGCAATGGACAGAAATTCTAGTTTATCATTGGGGACTTCTATCTCCTCTGGTGTTCTTCTTTCACAAGCTAAGTCACTTGGTAATGGTACAGAACGTAGTTTAGAAAGTGTACTGCATGCAAGCAAACAGAAGGTCAGTGCTATTGAGAGCATGCTTAGAGGCTTGGATTTGTCAAATAAGCATAATTCATCTGCTCTGCGATCTTCAAGTTTGGATCTAGGAGTTGACCCTCCCTCATCTCGTGATCCCCCATTCCCTGCTGCTGTTTCAGCCTCTAATCATCTGACCACCCCTTTAACAACAGAGTCACCTGGTTTGGGCGTCAATAGAGGCAGTATCCGGAACGGTGGTATGGGTTTGTCTGATATAATCACCCAAATTCAAGCTTCCAAAGATTCTGGCAAGTTATCGTATAATAGCAATGTTGGTATCGAGCCTTCATCAGATTTTTCATCATACACAAGTAAAAGGACTATTGAAAAATTACAAGGAAGAAGTTCTGTTGATGAAAACAGTTACATCCGGGAGACTAGGCGGTATATGAACCCCAATGTGGATAGGCAGTATATGGATGCTCTTTATAAAGATGGAAACTTTAGGGATTCACAGAATAGTTGTGTGCCTAATTTTCAGAGGCCACTATTAAGAAAGAACGTAGCTGCACGCGTGTCTTCTGGTAGAAGAAGGAGTGTCGATGATAGTCACTTATCTGTTGGAGAGATGTCAAATTATGCAGATGGACCAGCATCTCTTCATGAAGCCCTGAGTGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCCAGGGTTTCTGCCTTCAATTACCTTCACTCGTTATTGGAGCAAGGTCAAAAGGGAATTCAAGAAGTAGTCCAGAATTTTGAGAAGGTAATGAAGTTATTTTTTCAACACTTGGATGATCCCCATCATAAAATCGCACATGCGGCTCTCTCCACACTTGCAGATATTATTCGTACATGCCGAAAGCCATTTGAAGGTTACATGGAACGAATGTTACCTCATGTGTTTTCTCGTTTAATTGACCCCAAAGAGCTTGTTAGGCAAGCATGCTCTACGACTTTGGAGGCTGTGGGCAAAACATACAGTATAGATTCCCTCTTGCCCGCATTGCTACGTTCTCTTGACGAACAAAGGTCTCCAAAGGCTAAATTGGCTGTTATTGAGTTTGCAATCAGTTCCTTTAACAAGCATGCAATGAATCCGGAAGGTGCTGCAAATATTGGCATCCTAAAATTATGGCTTGCCAAGTTAGCCCCATTAGTTCACGATAAAAATACAAAGCTTAAAGAAGCAGCTATTACGTGCATTATATCAGTATACTCTCACTTCGATTCATCTGCAGTTTTGAATTTTATTCTTAGTTTGTCAGTTGATGAACAAAATTCTTTGAGACGAGCCCTTAAACAGCGCACCCCTCGCATTGAAGTAGACTTAATGAACTATCTGCAAAACAAGAAAGAGCGGCGTACCAAGTCTTCCTATGATCCATCTGATAATGTAGGAACATCCTCTGAAGAGGGATATGTTGGTTTGTCTAGAAAAGCACATTACATTGGGAGATATTTTGGTGGTTCTCTAGATAGTGATGGTGGCAGGAAATGGAGTTCCCAAGATTCGAACCTGATTAAAGCCAGTCGTGGCCAACCAGCTTCGGATGAAACTGAGGATCATCTGTATCAAAATCTTCAGACTAATTGTGATAGTGATATTGTTGGTTCAAAAGCCAAAGATCTTGCTTACACTGTCGATTCAATGGATCAAAACTTTGGCTTTCAAGCTGACCGACTTGGATACGTGGATAGTAGCATGAACTTTGAAGGTTTGCCATCTGATGTGGATGTTAATGGTCTGATGTCATTAGAACATTTAAATATTGCCGAAGGCTTTGAACATCTTTCTGAATTGAACAATAATCATCAGTCAGCTGAAGACGTGAAGGTCAACCACATGACAAACACAGGACTCAGTATTCCTCAAATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCACTATTTCAAGTAAGCGGACTGCACTTCTACAGTTAGTTGAAGCTTCTGAAGCAAATGATCATTCTTACTTCAATCAGATATTGACCGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCTTGCTCTTTCATTGATAGTTGAAATGCTTAAAAACCAGAAAGATGCCATGGAAAATTCAGTTGAGATTGTAATTGAAAAGCTGCTTAATGTTACAAAGGATACTGTTCCCAAGGTCTCAAACGAAGCGGAGCACTGCCTGACAATTGTTTTATCTCAGAATGATCCATTCAGATGTTTAAGTGTCATTATCCCTCTACTGGTTACCGAGGACGAGAAAACTCTAGTCACTTGCATAAATTGCTTGACTAAGATTGTGGGGCGGCTCTCTCAGGAGGAACTGATGGCTCAGTTACCCTCATTTCTCCCTGCATTGTTTGAAGCTTTTGGAAACCAGAGTGCGGATATTCGTAAGACTGTTGTTTTCTGTCTAGTGGATATTTATATCATGCTTGGGAAATCATTCTTGCCATATTTGGAAGGACTAAGCAGCACACAATTGAAGTTGGTTACGATTTATGCAAATCGAATCTCACATGCAAGGACAGGAAAATCAATTGATGCTGCTATCGATTAG
Protein sequence

>Msa0074790

MEEALELARAKDAKERMAGVERLHQVLEASRKTLSSTEVSSLVDCCLDLLKDSSFRVSQGALQALASAVVLSGDHFKLHFNALVPAVVDRLGDGICVWIRKVKSKCLSDKDEKLIKVSSPTIIVERAGSFAWTCKNWRVREEFARTVTSAIGLFSSTELPLQRAILPPTLQLLSDPNPAVREAAILCIEEMYAQAGSQFRDELQRHDLPSSLVKYINARLEGIQPKAQSSNGISSGYITGEMNPLNANPKKSSPKAKSSSKETSLFGGEGDVTEKGIEPIKVYSEKEFIREIEKIVSTLVPEKDWSVRITALQRIERLVLGGAADYPCFFGVLKQLVGPLSTQLSDRRSTIVKQACHLLCFLSKDLLGDFEACAEMFIPVLLKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIVDCAKSDRSAILRARCCDYALLILEHWPDAPEIQRSADLYEDMIRCCVSDAMGEVRSTARMCYRMFAKTWPERSRRLFSSFDPSIQRLINEEDGGKHRRHASPSIRDRSAPMSSSSQASTPNLSGYGTSAIVAMDRNSSLSLGTSISSGVLLSQAKSLGNGTERSLESVLHASKQKVSAIESMLRGLDLSNKHNSSALRSSSLDLGVDPPSSRDPPFPAAVSASNHLTTPLTTESPGLGVNRGSIRNGGMGLSDIITQIQASKDSGKLSYNSNVGIEPSSDFSSYTSKRTIEKLQGRSSVDENSYIRETRRYMNPNVDRQYMDALYKDGNFRDSQNSCVPNFQRPLLRKNVAARVSSGRRRSVDDSHLSVGEMSNYADGPASLHEALSEGLSSGSDWSARVSAFNYLHSLLEQGQKGIQEVVQNFEKVMKLFFQHLDDPHHKIAHAALSTLADIIRTCRKPFEGYMERMLPHVFSRLIDPKELVRQACSTTLEAVGKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNPEGAANIGILKLWLAKLAPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDEQNSLRRALKQRTPRIEVDLMNYLQNKKERRTKSSYDPSDNVGTSSEEGYVGLSRKAHYIGRYFGGSLDSDGGRKWSSQDSNLIKASRGQPASDETEDHLYQNLQTNCDSDIVGSKAKDLAYTVDSMDQNFGFQADRLGYVDSSMNFEGLPSDVDVNGLMSLEHLNIAEGFEHLSELNNNHQSAEDVKVNHMTNTGLSIPQILHMICSGGDGSTISSKRTALLQLVEASEANDHSYFNQILTVVLEVLDDSDSSIRELALSLIVEMLKNQKDAMENSVEIVIEKLLNVTKDTVPKVSNEAEHCLTIVLSQNDPFRCLSVIIPLLVTEDEKTLVTCINCLTKIVGRLSQEELMAQLPSFLPALFEAFGNQSADIRKTVVFCLVDIYIMLGKSFLPYLEGLSSTQLKLVTIYANRISHARTGKSIDAAID*