AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0026940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0026940 MtrunA17_Chr1g0182801 95.507 1469 29 2 1 1462 1 1439 0.0 2878
Msa0026940 MtrunA17_Chr7g0262651 78.769 1479 267 7 1 1462 1 1449 0.0 2290
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0026940 AT2G20190.1 69.831 1475 391 11 1 1459 1 1437 0.0 1978

Find 376 sgRNAs with CRISPR-Local

Find 1031 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCGAGGGGTGCGCTGTTTA+AGG 0.136096 1_1:+51070382 None:intergenic
CAATTACCTTCACTCGTTAT+TGG 0.158735 1_1:-51070982 Msa0026940:CDS
TCAGCTGATCGTTGTATTTC+TGG 0.168372 1_1:+51073601 None:intergenic
CCTGCATTGTTTGAAGCTTT+TGG 0.168454 1_1:-51067679 Msa0026940:CDS
AATCTTTGGAAGCTTGAATT+TGG 0.180104 1_1:+51071423 None:intergenic
ATTCATTGCATGCTTGTTAA+AGG 0.217319 1_1:+51070602 None:intergenic
TGAGATTCGATTTGCATAAA+TGG 0.223342 1_1:+51067052 None:intergenic
CGATAACTTGCCAGAATCTT+TGG 0.223624 1_1:+51071409 None:intergenic
CCAGGTGACTCTGTTGTTAA+AGG 0.224371 1_1:+51071506 None:intergenic
GAAAGCATTCTTGCCATATT+TGG 0.241839 1_1:-51067108 Msa0026940:CDS
TCATTACCTTCTCAAAATTC+TGG 0.244866 1_1:+51070928 None:intergenic
TTTATAAAGATGGAAACTTT+AGG 0.249342 1_1:-51071220 Msa0026940:CDS
TTTCATCATACACAAGTAAA+AGG 0.251237 1_1:-51071349 Msa0026940:CDS
TTATAAAGATGGAAACTTTA+GGG 0.265582 1_1:-51071219 Msa0026940:CDS
CCATTTGAAGACTGAGCTTT+TGG 0.272500 1_1:+51079173 None:intergenic
CATTACATTGGGAGATATTC+TGG 0.275991 1_1:-51070234 Msa0026940:CDS
GCTTGCCTAACAAGCTCTTT+GGG 0.276677 1_1:+51070756 None:intergenic
ATATTGGCATCCTAAAATTA+TGG 0.280769 1_1:-51070563 Msa0026940:CDS
CCACGACCTCCCTTCTTCTT+TGG 0.284767 1_1:-51079399 Msa0026940:intron
CTGCTTAGTCCTTCCAAATA+TGG 0.292046 1_1:+51067095 None:intergenic
AATAGTGGCCTCTGAAAATT+AGG 0.293085 1_1:+51071176 None:intergenic
CCTTCATTGTGTTGGCTTTG+AGG 0.295252 1_1:-51077454 Msa0026940:CDS
GAGAATCGAACGTCTTGTTT+TGG 0.297893 1_1:-51077855 Msa0026940:CDS
ATTCAAGCTTCCAAAGATTC+TGG 0.302569 1_1:-51071419 Msa0026940:CDS
CTTTAATCAGGTTCGAATCT+TGG 0.304662 1_1:+51070172 None:intergenic
TTTACATCGATTGAATTATA+TGG 0.304710 1_1:-51066755 Msa0026940:three_prime_UTR
AACAACAGAGTCACCTGGTT+TGG 0.311199 1_1:-51071501 Msa0026940:CDS
TGCTTGCCTAACAAGCTCTT+TGG 0.311833 1_1:+51070755 None:intergenic
CCATCTGATGTGGATGTTAA+TGG 0.315828 1_1:-51069955 Msa0026940:CDS
CCGGAAGGTGCTGCAAATAT+TGG 0.317521 1_1:-51070579 Msa0026940:CDS
CTTCATTGTGTTGGCTTTGA+GGG 0.321505 1_1:-51077453 Msa0026940:CDS
CCAATATTTGCAGCACCTTC+CGG 0.328268 1_1:+51070579 None:intergenic
GCAGGGTGCGCTTCAAGCTT+TGG 0.330576 1_1:-51082089 Msa0026940:CDS
CTTGAGATGAGTGTCAGATT+TGG 0.332488 1_1:-51066836 Msa0026940:three_prime_UTR
TCAGATAGTTGTGTGCTTAA+TGG 0.334263 1_1:+51076961 None:intergenic
TGCTCTGCGATCTTCAAGTT+TGG 0.338940 1_1:-51071750 Msa0026940:CDS
GCTCTTTCAACAATTATTGT+AGG 0.339564 1_1:+51080110 None:intergenic
ACACATACCCTCTGAATAGA+AGG 0.341103 1_1:+51072169 None:intergenic
GTAGCTGCACGCGTGTCTTC+TGG 0.345331 1_1:-51071143 Msa0026940:CDS
AAGGTCTCCAAAGGCTAAAT+TGG 0.346396 1_1:-51070649 Msa0026940:CDS
ATAACAGCCAATTTAGCCTT+TGG 0.347639 1_1:+51070642 None:intergenic
CAATGTGGATAGGCAGTATA+TGG 0.349075 1_1:-51071249 Msa0026940:CDS
CCGGCGGTTGTTGATCGGTT+GGG 0.351427 1_1:-51082010 Msa0026940:CDS
CGGCGGTTGTTGATCGGTTG+GGG 0.354470 1_1:-51082009 Msa0026940:CDS
TCATTTCAACGCGCTTGTTC+CGG 0.355888 1_1:-51082029 Msa0026940:CDS
GATAGGTTCAATGCCTTTCT+CGG 0.357239 1_1:+51077976 None:intergenic
AAGGGTCAAAGGATGAAAAT+AGG 0.362833 1_1:+51072188 None:intergenic
GCAAGCATGCTCTACGACTT+TGG 0.365976 1_1:-51070739 Msa0026940:CDS
CGATCTTCAAGTTTGGATCT+AGG 0.366039 1_1:-51071743 Msa0026940:intron
GCTATTGAGAGCATGCTTAG+AGG 0.366124 1_1:-51071803 Msa0026940:CDS
TTCTCCGAATACACCTTGAT+AGG 0.368292 1_1:+51077959 None:intergenic
AATTCAAATGCAAATGAGTT+CGG 0.370537 1_1:+51082375 None:intergenic
CTGAAACAGCAGCAGGGAAT+GGG 0.372574 1_1:+51071549 None:intergenic
CAGGTTCTGACTGGTCTGCC+AGG 0.372994 1_1:-51071016 Msa0026940:CDS
ATCTTTGGAAGCTTGAATTT+GGG 0.374481 1_1:+51071424 None:intergenic
GACAGTGTAAGCAAGATCTT+TGG 0.376905 1_1:+51070056 None:intergenic
CGTTGTATTTCTGGTGCATC+AGG 0.379467 1_1:+51073610 None:intergenic
AAGGTCTACCATTGTGAAAC+AGG 0.380415 1_1:-51076935 Msa0026940:intron
GCTTCAACTCCTAATCTATC+TGG 0.380863 1_1:-51071986 Msa0026940:CDS
TGCACAAAATAGCTGCTTCC+CGG 0.381583 1_1:+51079831 None:intergenic
TTCACTGGGTAGTACATTTG+TGG 0.382804 1_1:-51066983 Msa0026940:three_prime_UTR
TTTAATCAGGTTCGAATCTT+GGG 0.384132 1_1:+51070173 None:intergenic
ACAACAGAGTCACCTGGTTT+GGG 0.384351 1_1:-51071500 Msa0026940:CDS
TTGACCCCAAAGAGCTTGTT+AGG 0.386531 1_1:-51070761 Msa0026940:CDS
CTCCAACACCTTCATTGTGT+TGG 0.389452 1_1:-51077462 Msa0026940:CDS
TATTCCTCAAATTCTTCATA+TGG 0.389611 1_1:-51069812 Msa0026940:intron
CCTTACAAAACCGGCTTGTA+AGG 0.389747 1_1:+51077385 None:intergenic
GATTCAATGGATCAAAACTT+TGG 0.390826 1_1:-51070033 Msa0026940:CDS
TATGATAAGGTGTTGTGTTT+CGG 0.391872 1_1:-51073566 Msa0026940:CDS
CTTCTAGCAGCATCTCTAAC+AGG 0.391986 1_1:+51081974 None:intergenic
ACTCCTAATCTATCTGGTTA+TGG 0.395465 1_1:-51071980 Msa0026940:CDS
GCTACGTTCTTTCTTAATAG+TGG 0.396267 1_1:+51071161 None:intergenic
AGTGAAGTGTAATGGCCTAA+TGG 0.396378 1_1:+51082424 None:intergenic
GGCCACGACTGGCTTTAATC+AGG 0.397528 1_1:+51070160 None:intergenic
TGAACCTATCAAGGTGTATT+CGG 0.397599 1_1:-51077963 Msa0026940:CDS
TGTAACCTTCAAATGGCTTT+CGG 0.397798 1_1:+51070820 None:intergenic
CAGGTGACTCTGTTGTTAAA+GGG 0.398746 1_1:+51071507 None:intergenic
GACGCAAAGGAACGCATGGC+AGG 0.402496 1_1:-51082229 Msa0026940:CDS
CGAAGCTGGTTGGCCACGAC+TGG 0.405171 1_1:+51070149 None:intergenic
TGAGAGCATGCTTAGAGGCT+TGG 0.407222 1_1:-51071798 Msa0026940:CDS
TGCTTACACTGTCGATTCAA+TGG 0.407718 1_1:-51070046 Msa0026940:CDS
AAGCAAATGATCATTCTGTT+TGG 0.408015 1_1:-51069417 Msa0026940:CDS
GACACTCATCTCAAGGGAAA+AGG 0.410133 1_1:+51066844 None:intergenic
CAGTCGTGGCCAACCAGCTT+CGG 0.411534 1_1:-51070148 Msa0026940:CDS
CTCTACGACTTTGGAGGCTG+TGG 0.412649 1_1:-51070730 Msa0026940:CDS
CTGAGTGAAGGACTTAGTTC+AGG 0.413185 1_1:-51071035 Msa0026940:CDS
AATTTCATGCGGTGCTGAAT+CGG 0.413678 1_1:-51082338 Msa0026940:five_prime_UTR
TCAGGTCATTATCCCTCTAC+TGG 0.414745 1_1:-51068496 Msa0026940:intron
TTCTAGAAGCTTCTAGAACT+TGG 0.416007 1_1:+51082191 None:intergenic
TCCGGCGGTTGTTGATCGGT+TGG 0.417340 1_1:-51082011 Msa0026940:CDS
ATATACTGCCTATCCACATT+GGG 0.421255 1_1:+51071251 None:intergenic
GTGGATATTTATATCATGCT+TGG 0.422318 1_1:-51067131 Msa0026940:CDS
ATCACTCGTCGATTGTTGCT+TGG 0.422433 1_1:-51082143 Msa0026940:CDS
TTGAACATTACCAAAGAAGA+AGG 0.423104 1_1:+51079389 None:intergenic
TTGCATAAATTGCTTGACTA+AGG 0.423762 1_1:-51068445 Msa0026940:intron
TTGTTGCTTGGATCTCTTGA+AGG 0.426169 1_1:-51082131 Msa0026940:CDS
ATAGTGATGGTGGCAGGAAA+TGG 0.426224 1_1:-51070200 Msa0026940:CDS
GTGAAGTGTAATGGCCTAAT+GGG 0.426501 1_1:+51082425 None:intergenic
TGATCATTCTGTTTGGATCC+AGG 0.426875 1_1:-51069410 Msa0026940:intron
GATAGTAGCATGAACTTTGA+AGG 0.429549 1_1:-51069982 Msa0026940:CDS
GGAGTGTTGGCGGTGGAATA+CGG 0.429917 1_1:-51066815 Msa0026940:three_prime_UTR
ATTCAAATGCAAATGAGTTC+GGG 0.438679 1_1:+51082376 None:intergenic
CGTTCCATGTAACCTTCAAA+TGG 0.441625 1_1:+51070813 None:intergenic
ATGGATGCTCTTTATAAAGA+TGG 0.442350 1_1:-51071230 Msa0026940:CDS
GTGAACTAATGGGGCTAACT+TGG 0.442786 1_1:+51070536 None:intergenic
GTTATTGGAGCAAGGTCAAA+AGG 0.443541 1_1:-51070967 Msa0026940:CDS
TACTGAACTACCCCTTCAAC+GGG 0.443723 1_1:-51080000 Msa0026940:CDS
CTCACCATATGAAGAATTTG+AGG 0.444451 1_1:+51069808 None:intergenic
GCGAGGGGTGCGCTGTTTAA+GGG 0.444570 1_1:+51070383 None:intergenic
GGAGTCCTAAAACAGCTTGT+TGG 0.445362 1_1:-51076985 Msa0026940:CDS
GAGAGAGAAAGAGGAAAAGA+TGG 0.445846 1_1:+51082454 None:intergenic
TGCTTCCCGGACAGAAGGAT+TGG 0.446408 1_1:+51079844 None:intergenic
TGGATATTTATATCATGCTT+GGG 0.448346 1_1:-51067130 Msa0026940:CDS
AGGGGTGGTCAGATGATTAG+AGG 0.454155 1_1:+51071526 None:intergenic
AGAAAGATGTTCAAAGCCTT+CGG 0.454499 1_1:+51069903 None:intergenic
TCACTGGGTAGTACATTTGT+GGG 0.454814 1_1:-51066982 Msa0026940:three_prime_UTR
GAAGGTGATGTCACCGAGAA+AGG 0.454990 1_1:-51077989 Msa0026940:CDS
GCTGAAACAGCAGCAGGGAA+TGG 0.455146 1_1:+51071548 None:intergenic
CAGTATCCGGAACGGTGGTA+TGG 0.458057 1_1:-51071465 Msa0026940:CDS
TACATTATCAGATGGATCAT+AGG 0.458373 1_1:+51070302 None:intergenic
GAAGATGAAGGACGCGGAGG+AGG 0.458816 1_1:+51082545 None:intergenic
ATCTCTAGTGGTTATATCAC+TGG 0.460232 1_1:-51079149 Msa0026940:CDS
GGCTTTCAAGCTGACCGACT+TGG 0.461172 1_1:-51070012 Msa0026940:CDS
GGGAGTGTAGAGAGAGAAAG+AGG 0.461524 1_1:+51082445 None:intergenic
ATTCGGAGAAGGAATTCATC+AGG 0.461731 1_1:-51077946 Msa0026940:CDS
CTAGAAAAGCACATTACATT+GGG 0.462034 1_1:-51070245 Msa0026940:CDS
AGAAATTCTAGTTTATCATC+GGG 0.463153 1_1:-51071932 Msa0026940:CDS
AGAGAGAGAGATGGAGTGTG+TGG 0.464312 1_1:+51082496 None:intergenic
ATTAGGAGTTGAAGCTTGAC+TGG 0.465486 1_1:+51071994 None:intergenic
TGGTGGTTCAGATCTGGTTA+TGG 0.465668 1_1:+51082309 None:intergenic
ACATGCCGAAAGCCATTTGA+AGG 0.466049 1_1:-51070825 Msa0026940:CDS
TTGTTCCGGCGGTTGTTGAT+CGG 0.466426 1_1:-51082015 Msa0026940:CDS
GTTCCATAACCAGATAGATT+AGG 0.467252 1_1:+51071977 None:intergenic
ACACTCATCTCAAGGGAAAA+GGG 0.468855 1_1:+51066845 None:intergenic
TGATGCTGCTATCGATTAGC+AGG 0.471701 1_1:-51067006 Msa0026940:exon
CAGGAAATGTATGCACAAGC+TGG 0.472120 1_1:-51079449 Msa0026940:CDS
CAGAAATTCTAGTTTATCAT+CGG 0.472579 1_1:-51071933 Msa0026940:CDS
GCGATCCCAATCCTTCTGTC+CGG 0.474043 1_1:-51079850 Msa0026940:CDS
CTATCGATTAGCAGGTTCAC+TGG 0.474297 1_1:-51066998 Msa0026940:exon
GGTGTGTGGTGGTTCAGATC+TGG 0.474420 1_1:+51082303 None:intergenic
ATCTACCCTTGTACCAGAAA+AGG 0.475316 1_1:-51077906 Msa0026940:CDS
CTTTCACAAGCTAAGTCACT+TGG 0.476687 1_1:-51071884 Msa0026940:CDS
CCAAAAGCTCAGTCTTCAAA+TGG 0.477978 1_1:-51079173 Msa0026940:CDS
CATTGTGAAGGGATTGGATC+TGG 0.478152 1_1:+51082282 None:intergenic
GAGGAAGAATAGCCCGTTGA+AGG 0.478849 1_1:+51079988 None:intergenic
TACAATAATTGTTGAAAGAG+CGG 0.480101 1_1:-51080108 Msa0026940:CDS
CCAAAAGCTTCAAACAATGC+AGG 0.481915 1_1:+51067679 None:intergenic
GTGTTGTGTTTCGGACGCAA+TGG 0.482310 1_1:-51073557 Msa0026940:CDS
ACAAACCCATACCACCGTTC+CGG 0.482926 1_1:+51071459 None:intergenic
AAGTTGCTCGTGTGCTTCCT+CGG 0.483255 1_1:-51073788 Msa0026940:CDS
AATTGTGATAGTGATATTGT+TGG 0.484547 1_1:-51070087 Msa0026940:CDS
CGAATCTCACATGCAAGGAC+AGG 0.484968 1_1:-51067038 Msa0026940:CDS
ACAATAATTGTTGAAAGAGC+GGG 0.485190 1_1:-51080107 Msa0026940:CDS
TTCCTCCATTGTGAAGGGAT+TGG 0.485551 1_1:+51082276 None:intergenic
AGGTTCTGACTGGTCTGCCA+GGG 0.485808 1_1:-51071015 Msa0026940:CDS
TCCTCTGAAGAGGGATATGT+TGG 0.487001 1_1:-51070273 Msa0026940:CDS
TCTACACTTAAACATCTGAA+TGG 0.488025 1_1:+51068619 None:intergenic
GAGAGAGAGATGGAGTGTGT+GGG 0.490841 1_1:+51082497 None:intergenic
TTGATGAAAACAGTTACATC+CGG 0.491445 1_1:-51071295 Msa0026940:CDS
CCTGGTTTGGGCGTCAATAG+AGG 0.492622 1_1:-51071488 Msa0026940:CDS
TCTGAGATAAAACAATTGTC+AGG 0.493217 1_1:+51068647 None:intergenic
CTATAATAGAATGTGGGAGT+GGG 0.493971 1_1:+51082522 None:intergenic
GATGATAGTCACTTATCTGT+TGG 0.496533 1_1:-51071104 Msa0026940:CDS
AAGACTCTTGCTCACTCTCA+TGG 0.496648 1_1:-51081954 Msa0026940:CDS
TCTAGAAAAGCACATTACAT+TGG 0.496864 1_1:-51070246 Msa0026940:CDS
CAGTGCTTCCTCCATTGTGA+AGG 0.497017 1_1:+51082270 None:intergenic
TCCTCAGTTTCATCCGAAGC+TGG 0.497185 1_1:+51070135 None:intergenic
TAGAAGCTTCTAGAACTTGG+TGG 0.498070 1_1:+51082194 None:intergenic
TAACAAGCATGCAATGAATC+CGG 0.499037 1_1:-51070598 Msa0026940:CDS
TGTTGTGTTTCGGACGCAAT+GGG 0.499272 1_1:-51073556 Msa0026940:CDS
AAGTGATAACAATGGTTATG+AGG 0.501274 1_1:+51082577 None:intergenic
CTTGAGAAGAGTTTATAAAG+AGG 0.503669 1_1:-51077420 Msa0026940:CDS
TCGGGGACTTCTATCTCCTC+TGG 0.504362 1_1:-51071914 Msa0026940:CDS
CTTTGACCCTTCTATTCAGA+GGG 0.506049 1_1:-51072176 Msa0026940:intron
TTCATTGTGTTGGCTTTGAG+GGG 0.506705 1_1:-51077452 Msa0026940:CDS
TCAAGAGAACGTAGCAATGC+GGG 0.508608 1_1:+51070678 None:intergenic
CATATACTGCCTATCCACAT+TGG 0.511096 1_1:+51071250 None:intergenic
TCTCTCTCTACACTCCCATT+AGG 0.512122 1_1:-51082439 Msa0026940:five_prime_UTR
TGTGGGAGTGGGGAAGATGA+AGG 0.515467 1_1:+51082533 None:intergenic
AGGGCTTCATGAAGAGATGC+TGG 0.516401 1_1:+51071056 None:intergenic
CTCTAGATAGTGATGGTGGC+AGG 0.516871 1_1:-51070206 Msa0026940:CDS
TTCTTGGGATTAGCATTCAA+AGG 0.517866 1_1:+51079116 None:intergenic
CAGATTTGGAGTGTTGGCGG+TGG 0.517996 1_1:-51066822 Msa0026940:three_prime_UTR
AGTGCTTCCTCCATTGTGAA+GGG 0.518936 1_1:+51082271 None:intergenic
TCATATACCGCCTAGTCTCC+CGG 0.522524 1_1:+51071276 None:intergenic
TGAAACAGCAGCAGGGAATG+GGG 0.524328 1_1:+51071550 None:intergenic
TATAATAGAATGTGGGAGTG+GGG 0.524448 1_1:+51082523 None:intergenic
AACTTCAGCTATTGTTGCAA+TGG 0.524607 1_1:-51071957 Msa0026940:CDS
AATAGGCGACGGGAACGCTC+CGG 0.525889 1_1:+51072205 None:intergenic
GCGTCAATAGAGGCAGTATC+CGG 0.527753 1_1:-51071478 Msa0026940:CDS
CGATCCCAATCCTTCTGTCC+GGG 0.528427 1_1:-51079849 Msa0026940:CDS
GCTTCCCGGACAGAAGGATT+GGG 0.528977 1_1:+51079845 None:intergenic
TATGATCCATCTGATAATGT+AGG 0.529026 1_1:-51070300 Msa0026940:CDS
CAAGCTAAGTCACTTGGTAA+TGG 0.529158 1_1:-51071878 Msa0026940:CDS
GACTTAGTTCAGGTTCTGAC+TGG 0.529168 1_1:-51071025 Msa0026940:CDS
AGAGAGAGATGGAGTGTGTG+GGG 0.529971 1_1:+51082498 None:intergenic
CGCAAAGGAACGCATGGCAG+GGG 0.530233 1_1:-51082227 Msa0026940:CDS
CAAATCTGACACTCATCTCA+AGG 0.530584 1_1:+51066837 None:intergenic
ATCGATTGAATTATATGGTG+AGG 0.530664 1_1:-51066750 Msa0026940:three_prime_UTR
TATATTAATGCTAGGCTAGA+GGG 0.531374 1_1:-51079203 Msa0026940:CDS
GAAAGGCATTGAACCTATCA+AGG 0.532088 1_1:-51077972 Msa0026940:CDS
AAGAGCAAGCTCTCTGATTG+AGG 0.533744 1_1:+51069022 None:intergenic
CCAAAGAAGAAGGGAGGTCG+TGG 0.534430 1_1:+51079399 None:intergenic
TAACGAGTGAAGGTAATTGA+AGG 0.534963 1_1:+51070986 None:intergenic
CTTCACAATGGAGGAAGCAC+TGG 0.535217 1_1:-51082269 Msa0026940:exon
TGTCTGTGTAGATATGCAGT+GGG 0.535325 1_1:-51069501 Msa0026940:intron
TGTTTCGGACGCAATGGGCG+AGG 0.535955 1_1:-51073551 Msa0026940:intron
ACAGTTACATCCGGGAGACT+AGG 0.537409 1_1:-51071286 Msa0026940:CDS
CTACTGAACTACCCCTTCAA+CGG 0.537708 1_1:-51080001 Msa0026940:CDS
AAACAATGCAGGGAGAAATG+AGG 0.537889 1_1:+51067690 None:intergenic
AAAGCCATTTGAAGGTTACA+TGG 0.537923 1_1:-51070817 Msa0026940:CDS
CAAGACGTTCGATTCTCTGC+AGG 0.538026 1_1:+51077861 None:intergenic
CAGTTTCATCCGAAGCTGGT+TGG 0.538545 1_1:+51070139 None:intergenic
CAACACAATGAAGGTGTTGG+AGG 0.539577 1_1:+51077463 None:intergenic
TTATCGTATAATAGCAATGT+TGG 0.543314 1_1:-51071392 Msa0026940:CDS
GCTTCCGCCGTTGTTCTCTC+CGG 0.543648 1_1:-51082067 Msa0026940:CDS
AGTATCCGGAACGGTGGTAT+GGG 0.543745 1_1:-51071464 Msa0026940:CDS
CCTCAAAGCCAACACAATGA+AGG 0.545064 1_1:+51077454 None:intergenic
TTAGAGGCTGAAACAGCAGC+AGG 0.546251 1_1:+51071542 None:intergenic
CCTTTGACCCTTCTATTCAG+AGG 0.546630 1_1:-51072177 Msa0026940:CDS
GCATTCTTGCCATATTTGGA+AGG 0.549962 1_1:-51067104 Msa0026940:CDS
TTGTTTCCAGAAAGATGCCA+TGG 0.550205 1_1:-51068840 Msa0026940:intron
TGTTTGTTAAGAAAATGAAA+AGG 0.550583 1_1:-51066699 Msa0026940:three_prime_UTR
AGCCAACACAATGAAGGTGT+TGG 0.551141 1_1:+51077460 None:intergenic
AGGTGAAATATATTAATGCT+AGG 0.553111 1_1:-51079211 Msa0026940:CDS
ACTATAATAGAATGTGGGAG+TGG 0.553226 1_1:+51082521 None:intergenic
GCTCTCTCAGGAGGAACTGA+TGG 0.555375 1_1:-51067722 Msa0026940:intron
TTAAGTCTACTTCAATGCGA+GGG 0.556968 1_1:+51070367 None:intergenic
GAACATTTAAATATTGCCGA+AGG 0.557366 1_1:-51069919 Msa0026940:CDS
AAGGGATTGGATCTGGTGTG+TGG 0.558188 1_1:+51082289 None:intergenic
CAAAAGCTTCAAACAATGCA+GGG 0.558776 1_1:+51067680 None:intergenic
GAAGGACGCAAAGGAACGCA+TGG 0.559104 1_1:-51082233 Msa0026940:CDS
CCTCTATTGACGCCCAAACC+AGG 0.559407 1_1:+51071488 None:intergenic
CTTCACTCGTTATTGGAGCA+AGG 0.560390 1_1:-51070975 Msa0026940:CDS
GAGATGTCAAATTATGCAGA+TGG 0.560673 1_1:-51071080 Msa0026940:CDS
TACGTTCTCTTGACGAACAA+AGG 0.561024 1_1:-51070668 Msa0026940:CDS
ACGCAAAGGAACGCATGGCA+GGG 0.562340 1_1:-51082228 Msa0026940:CDS
GGAAGAATAGCCCGTTGAAG+GGG 0.562874 1_1:+51079990 None:intergenic
AAGCAGCACACAGTTGAAGT+TGG 0.563963 1_1:-51067078 Msa0026940:CDS
AAGAAGATGGAGGCAAACAT+AGG 0.564426 1_1:-51072066 Msa0026940:CDS
TGAACATTACCAAAGAAGAA+GGG 0.565471 1_1:+51079390 None:intergenic
AAAGGCTAAAAGTTCATCAA+AGG 0.565933 1_1:-51079084 Msa0026940:CDS
CCTTTAACAACAGAGTCACC+TGG 0.567160 1_1:-51071506 Msa0026940:CDS
AACGTAGCAATGCGGGCAAG+AGG 0.567385 1_1:+51070685 None:intergenic
TCATTGTGTTGGCTTTGAGG+GGG 0.568318 1_1:-51077451 Msa0026940:CDS
GATATTGACCGTTGTGCTTG+AGG 0.569910 1_1:-51069063 Msa0026940:CDS
TGAAGGTTTGCCATCTGATG+TGG 0.570068 1_1:-51069965 Msa0026940:CDS
ATAGCTGCTTCCCGGACAGA+AGG 0.571062 1_1:+51079839 None:intergenic
GAGAAGAGTTTATAAAGAGG+AGG 0.571345 1_1:-51077417 Msa0026940:CDS
AACAATGCAGGGAGAAATGA+GGG 0.571549 1_1:+51067691 None:intergenic
TTTCAACGCGCTTGTTCCGG+CGG 0.572413 1_1:-51082026 Msa0026940:CDS
TGTCAGATTTGGAGTGTTGG+CGG 0.574517 1_1:-51066825 Msa0026940:three_prime_UTR
ATATGAACCCCAATGTGGAT+AGG 0.575880 1_1:-51071259 Msa0026940:CDS
GTGGGGACTATAATAGAATG+TGG 0.575887 1_1:+51082515 None:intergenic
AGATGGATCATAGGAAGACT+TGG 0.576367 1_1:+51070311 None:intergenic
ACTTATACGAGGATATGATA+AGG 0.576524 1_1:-51073579 Msa0026940:CDS
CCCTTGTACCAGAAAAGGAC+TGG 0.576763 1_1:-51077901 Msa0026940:CDS
GCGTGTCTTCTGGTAGAAGA+AGG 0.577836 1_1:-51071133 Msa0026940:CDS
TATCAAGGTGTATTCGGAGA+AGG 0.578869 1_1:-51077957 Msa0026940:CDS
CCATTAACATCCACATCAGA+TGG 0.579257 1_1:+51069955 None:intergenic
CCTCTGAATAGAAGGGTCAA+AGG 0.579355 1_1:+51072177 None:intergenic
CAGTTAATAAATGAAGAAGA+TGG 0.579873 1_1:-51072079 Msa0026940:CDS
AGGAAGAATAGCCCGTTGAA+GGG 0.580099 1_1:+51079989 None:intergenic
GGATTGGATCTGGTGTGTGG+TGG 0.582079 1_1:+51082292 None:intergenic
ACGAATAATATCTGCAAGTG+TGG 0.583341 1_1:+51070848 None:intergenic
GTAATTGAAGGCAGAAACCC+TGG 0.586113 1_1:+51070998 None:intergenic
GATGTTCCTACATTATCAGA+TGG 0.586366 1_1:+51070294 None:intergenic
CTTCATGAAGCCCTGAGTGA+AGG 0.589143 1_1:-51071047 Msa0026940:CDS
GTAGGAACATCCTCTGAAGA+GGG 0.591027 1_1:-51070282 Msa0026940:CDS
CGAACCGTGACATCTGCAAT+CGG 0.591091 1_1:-51080035 Msa0026940:CDS
TGTAGGAACATCCTCTGAAG+AGG 0.591159 1_1:-51070283 Msa0026940:CDS
TTGTCTGTGTAGATATGCAG+TGG 0.591301 1_1:-51069502 Msa0026940:intron
TCGTCCTCGGTAACCAGTAG+AGG 0.591666 1_1:+51068483 None:intergenic
TCTTCAAATGGTATCTCTAG+TGG 0.591900 1_1:-51079161 Msa0026940:CDS
GGTGGTTCTCTAGATAGTGA+TGG 0.593252 1_1:-51070213 Msa0026940:CDS
ATGAAGCTTAAAATGATCGC+CGG 0.593923 1_1:+51082048 None:intergenic
AAAGGATGAAAATAGGCGAC+GGG 0.594792 1_1:+51072195 None:intergenic
AAAGCTGCTTAATGTTACAA+AGG 0.594817 1_1:-51068792 Msa0026940:CDS
GCACTCCTCACCTTACAAGC+CGG 0.595558 1_1:-51077395 Msa0026940:intron
GGCGGTTGTTGATCGGTTGG+GGG 0.595732 1_1:-51082008 Msa0026940:CDS
TATCGATTAGCAGGTTCACT+GGG 0.595842 1_1:-51066997 Msa0026940:exon
GGGGATCACGAGATGAGGGA+GGG 0.596624 1_1:+51071570 None:intergenic
TACAAAGGATACTGTTCCCA+AGG 0.597735 1_1:-51068777 Msa0026940:intron
AGGAAATGTATGCACAAGCT+GGG 0.598212 1_1:-51079448 Msa0026940:CDS
AAATCTGACACTCATCTCAA+GGG 0.598295 1_1:+51066838 None:intergenic
CCCAACCGATCAACAACCGC+CGG 0.598778 1_1:+51082010 None:intergenic
TTATTGGAGCAAGGTCAAAA+GGG 0.599354 1_1:-51070966 Msa0026940:CDS
CACATACCCTCTGAATAGAA+GGG 0.599409 1_1:+51072170 None:intergenic
TGAGTCCTGTGTTTGTCATG+TGG 0.600431 1_1:+51069836 None:intergenic
ATCCAATCCCTTCACAATGG+AGG 0.601090 1_1:-51082278 Msa0026940:exon
CTTGCCTAACAAGCTCTTTG+GGG 0.601192 1_1:+51070757 None:intergenic
TCCCAAGAAAAGTAGTCCAA+AGG 0.602354 1_1:-51079102 Msa0026940:CDS
GAAACAGCAGCAGGGAATGG+GGG 0.602928 1_1:+51071551 None:intergenic
AAAGAAGAGAAGCACATGGA+TGG 0.603310 1_1:-51082621 Msa0026940:five_prime_UTR
CTGAACTAAGTCCTTCACTC+AGG 0.603325 1_1:+51071036 None:intergenic
ATTAAGTCTACTTCAATGCG+AGG 0.603360 1_1:+51070366 None:intergenic
TGGTGCACTTCTATCACGAA+TGG 0.604974 1_1:+51072027 None:intergenic
TGTGAGAGAGTGAAGTGTAA+TGG 0.605892 1_1:+51082416 None:intergenic
ATATTAATGCTAGGCTAGAG+GGG 0.610650 1_1:-51079202 Msa0026940:CDS
ACGTAGCAATGCGGGCAAGA+GGG 0.611057 1_1:+51070686 None:intergenic
AGCATGCTCTACGACTTTGG+AGG 0.613842 1_1:-51070736 Msa0026940:CDS
ATATATTAATGCTAGGCTAG+AGG 0.614694 1_1:-51079204 Msa0026940:CDS
CCATCATAAAATCGCACATG+CGG 0.614775 1_1:-51070877 Msa0026940:CDS
TAACAATGGTTATGAGGTGG+CGG 0.615082 1_1:+51082583 None:intergenic
AGCACGCGCGAAGGACGCAA+AGG 0.616457 1_1:-51082242 Msa0026940:CDS
AGGTGACTCTGTTGTTAAAG+GGG 0.616970 1_1:+51071508 None:intergenic
CTTGCTCCAATAACGAGTGA+AGG 0.617821 1_1:+51070976 None:intergenic
CCAGAGTGCGGATATTCGTA+AGG 0.618286 1_1:-51067653 Msa0026940:intron
TGGGGACTATAATAGAATGT+GGG 0.618525 1_1:+51082516 None:intergenic
CCTTACGAATATCCGCACTC+TGG 0.619470 1_1:+51067653 None:intergenic
AAGACGTTCGATTCTCTGCA+GGG 0.620290 1_1:+51077862 None:intergenic
CGTCCTCGGTAACCAGTAGA+GGG 0.620937 1_1:+51068484 None:intergenic
CAAAGGATGAAAATAGGCGA+CGG 0.621556 1_1:+51072194 None:intergenic
GATAGGTGCGGTCAACTGCA+AGG 0.621898 1_1:-51072258 Msa0026940:intron
GCACTTCTATCACGAATGGA+AGG 0.625563 1_1:+51072031 None:intergenic
ACTGGAACTAGCACGCGCGA+AGG 0.626221 1_1:-51082251 Msa0026940:CDS
TGACTCTGTTGTTAAAGGGG+TGG 0.631386 1_1:+51071511 None:intergenic
TTCGGAGAAGGAATTCATCA+GGG 0.632832 1_1:-51077945 Msa0026940:CDS
TGATGAAAACAGTTACATCC+GGG 0.633373 1_1:-51071294 Msa0026940:CDS
TGACGAACAAAGGTCTCCAA+AGG 0.635022 1_1:-51070658 Msa0026940:CDS
TCTACGACTTTGGAGGCTGT+GGG 0.636526 1_1:-51070729 Msa0026940:CDS
TCAGTCAGCTGAAGACGTGA+AGG 0.636700 1_1:-51069863 Msa0026940:CDS
GCACACAACTATCTGATCGA+AGG 0.639040 1_1:-51076954 Msa0026940:CDS
AGTGGGGAAGATGAAGGACG+CGG 0.639581 1_1:+51082539 None:intergenic
TTTGCACAATCAACTATCCG+AGG 0.640328 1_1:+51073771 None:intergenic
AGCTGACCGACTTGGATACG+TGG 0.641471 1_1:-51070004 Msa0026940:CDS
GAGTGTCAGATTTGGAGTGT+TGG 0.641571 1_1:-51066828 Msa0026940:three_prime_UTR
ATCTGCAAAACAAGAAAGAG+CGG 0.643722 1_1:-51070338 Msa0026940:CDS
ACCAGCTTCGGATGAAACTG+AGG 0.644810 1_1:-51070136 Msa0026940:CDS
TGAACTAAGTCCTTCACTCA+GGG 0.645273 1_1:+51071037 None:intergenic
ATTTACATTTCAATTTCATG+CGG 0.646262 1_1:-51082349 Msa0026940:five_prime_UTR
TTAATAAATGAAGAAGATGG+AGG 0.648630 1_1:-51072076 Msa0026940:CDS
ATCGACGAGTGATGAAACTT+CGG 0.648728 1_1:+51082153 None:intergenic
TCTTCAGGTCTCAAACGAAG+CGG 0.650958 1_1:-51068677 Msa0026940:intron
GTCAACCACATGACAAACAC+AGG 0.652740 1_1:-51069841 Msa0026940:CDS
CAAAACCGGCTTGTAAGGTG+AGG 0.652874 1_1:+51077390 None:intergenic
TGATAACAATGGTTATGAGG+TGG 0.653088 1_1:+51082580 None:intergenic
GGGGAAGATGAAGGACGCGG+AGG 0.654361 1_1:+51082542 None:intergenic
AAGCATGCAATGAATCCGGA+AGG 0.654808 1_1:-51070594 Msa0026940:CDS
TAGACCGATTGCAGATGTCA+CGG 0.654881 1_1:+51080031 None:intergenic
CAGATCCAATCCCTTCACAA+TGG 0.660789 1_1:-51082281 Msa0026940:exon
GCAGTGCAATACTTCGTGCA+AGG 0.662397 1_1:-51073740 Msa0026940:intron
CAAATCGAATCTCACATGCA+AGG 0.662437 1_1:-51067043 Msa0026940:CDS
AACCTGATTAAAGCCAGTCG+TGG 0.662903 1_1:-51070162 Msa0026940:CDS
TACATTGGGAGATATTCTGG+TGG 0.663979 1_1:-51070231 Msa0026940:CDS
TACTATCCACGTATCCAAGT+CGG 0.664568 1_1:+51069998 None:intergenic
ACCAACATATCCCTCTTCAG+AGG 0.665572 1_1:+51070272 None:intergenic
GGTTCTCTAGATAGTGATGG+TGG 0.666599 1_1:-51070210 Msa0026940:CDS
CAATAATTGTTGAAAGAGCG+GGG 0.667879 1_1:-51080106 Msa0026940:CDS
ACTGCATGCAAGCAAACAGA+AGG 0.668966 1_1:-51071831 Msa0026940:CDS
GTCTGTGTAGATATGCAGTG+GGG 0.669583 1_1:-51069500 Msa0026940:intron
TAAGTCTACTTCAATGCGAG+GGG 0.670383 1_1:+51070368 None:intergenic
CCGAAAAGAAGAGAAGCACA+TGG 0.670445 1_1:-51082625 Msa0026940:five_prime_UTR
TAGAGGCTGAAACAGCAGCA+GGG 0.672931 1_1:+51071543 None:intergenic
GTCAAGAGAACGTAGCAATG+CGG 0.674735 1_1:+51070677 None:intergenic
TCAGAGCACCTGTTTCACAA+TGG 0.675338 1_1:+51076927 None:intergenic
TTGTGAAAGAAGAACACCAG+AGG 0.676556 1_1:+51071898 None:intergenic
ATGCTTCAAAATCACCCAAG+AGG 0.679266 1_1:+51074077 None:intergenic
GAAATTCTAGTTTATCATCG+GGG 0.679560 1_1:-51071931 Msa0026940:CDS
ATTAAACGAGAAAACACATG+AGG 0.679998 1_1:+51070783 None:intergenic
ATGATCGCCGGAGAGAACAA+CGG 0.680734 1_1:+51082060 None:intergenic
ATCTAGCACCTCAAGCACAA+CGG 0.685561 1_1:+51069055 None:intergenic
TCTGTGTAGATATGCAGTGG+GGG 0.690750 1_1:-51069499 Msa0026940:intron
GAAGCACTATTTCAAGTAAG+CGG 0.692353 1_1:-51069471 Msa0026940:CDS
TATACTGCCTATCCACATTG+GGG 0.692454 1_1:+51071252 None:intergenic
GCTTGACTGGAAGATGACAT+TGG 0.695289 1_1:+51072007 None:intergenic
AGAGGCAGTATCCGGAACGG+TGG 0.699152 1_1:-51071470 Msa0026940:CDS
GCGGTATATGAACCCCAATG+TGG 0.704015 1_1:-51071264 Msa0026940:CDS
AATAGAGGCAGTATCCGGAA+CGG 0.705699 1_1:-51071473 Msa0026940:CDS
ACATTACCAAAGAAGAAGGG+AGG 0.706777 1_1:+51079393 None:intergenic
GTTACATCCGGGAGACTAGG+CGG 0.720518 1_1:-51071283 Msa0026940:CDS
TATCCCTCTACTGGTTACCG+AGG 0.724298 1_1:-51068487 Msa0026940:CDS
ATCGCCGGAGAGAACAACGG+CGG 0.732065 1_1:+51082063 None:intergenic
ACTCTTGCTCACTCTCATGG+AGG 0.745771 1_1:-51081951 Msa0026940:intron
ACGATCAGCTGACTTATACG+AGG 0.758181 1_1:-51073590 Msa0026940:CDS
TTGCACGAAGTATTGCACTG+CGG 0.851515 1_1:+51073742 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTGTATATGAATATTA+AGG - chr1_1:51069765-51069784 Msa0026940:intron 10.0%
!! ATGATAAGAAATATAATTAT+AGG - chr1_1:51070595-51070614 Msa0026940:CDS 10.0%
!! TGATAAGAAATATAATTATA+GGG - chr1_1:51070596-51070615 Msa0026940:CDS 10.0%
!! TATAAAACTTAAAAAATGTT+TGG + chr1_1:51072172-51072191 None:intergenic 10.0%
!! ATATGCTAAAAAAAATTATT+AGG + chr1_1:51074614-51074633 None:intergenic 10.0%
!!! TTATTTAACACATAATATTT+TGG + chr1_1:51074653-51074672 None:intergenic 10.0%
!!! AATATGAAATTTTAAGTTTT+TGG - chr1_1:51074895-51074914 Msa0026940:intron 10.0%
!!! AAATTTGATATATTTTTAGA+GGG - chr1_1:51075037-51075056 Msa0026940:intron 10.0%
!!! TTTTTTTATCTTTGATTAAA+AGG - chr1_1:51076405-51076424 Msa0026940:intron 10.0%
!!! TTTTTTATCTTTGATTAAAA+GGG - chr1_1:51076406-51076425 Msa0026940:intron 10.0%
!! AATAAAATAAATATATCGTT+CGG + chr1_1:51076660-51076679 None:intergenic 10.0%
!!! TTATTATTTTCATATATACA+AGG - chr1_1:51076788-51076807 Msa0026940:intron 10.0%
!! ATAGAAATAAAATATATAAC+AGG + chr1_1:51077637-51077656 None:intergenic 10.0%
!!! TAAAAATTTTATTTTGGAAA+AGG + chr1_1:51080065-51080084 None:intergenic 10.0%
!!! CTATTAATTTTTCTATATTT+TGG - chr1_1:51080752-51080771 Msa0026940:intron 10.0%
!!! TTTGTCTTATATTATTTTTT+TGG - chr1_1:51082467-51082486 Msa0026940:five_prime_UTR 10.0%
!!! ATTTATGTTAGAATCAATTT+TGG - chr1_1:51067581-51067600 Msa0026940:intron 15.0%
!!! GATTTCATTTTTAAGATTTT+TGG + chr1_1:51068232-51068251 None:intergenic 15.0%
!! AGTAAATGAAAATTTGAATA+TGG - chr1_1:51068431-51068450 Msa0026940:intron 15.0%
!! GTAAATGAAAATTTGAATAT+GGG - chr1_1:51068432-51068451 Msa0026940:intron 15.0%
!!! ATTTTACGATAAAAGTTTTT+GGG + chr1_1:51068670-51068689 None:intergenic 15.0%
!!! TATTTTACGATAAAAGTTTT+TGG + chr1_1:51068671-51068690 None:intergenic 15.0%
!!! TTGTTACTTATTATTATTGT+AGG - chr1_1:51069198-51069217 Msa0026940:intron 15.0%
!! AAACTTCAAATAATATATGT+CGG + chr1_1:51069555-51069574 None:intergenic 15.0%
!! AATATTCATATACAATATTG+TGG + chr1_1:51069764-51069783 None:intergenic 15.0%
!! AAAACAAATTATAATGCTAT+TGG + chr1_1:51070401-51070420 None:intergenic 15.0%
!!! TAATACAGAACTTTTTTTAA+AGG + chr1_1:51070787-51070806 None:intergenic 15.0%
!!! TAATACAGAACTTTTTTTAA+AGG + chr1_1:51070787-51070806 None:intergenic 15.0%
!! TAAGTGAAGATTAAAATATT+CGG + chr1_1:51071093-51071112 None:intergenic 15.0%
!! TTCACTTAAATGAAAAATTT+AGG - chr1_1:51071105-51071124 Msa0026940:CDS 15.0%
!! GATAAAGTGATATAATTAAA+AGG - chr1_1:51071146-51071165 Msa0026940:CDS 15.0%
!! AAAATTAAATGTATGACTTT+GGG + chr1_1:51071183-51071202 None:intergenic 15.0%
!! AAAAATTAAATGTATGACTT+TGG + chr1_1:51071184-51071203 None:intergenic 15.0%
!!! ATTTGTTAATGTTGAAATTT+GGG + chr1_1:51071991-51072010 None:intergenic 15.0%
!!! TATTTGTTAATGTTGAAATT+TGG + chr1_1:51071992-51072011 None:intergenic 15.0%
!! ATAAAATTTGTAAACTATCT+TGG - chr1_1:51072949-51072968 Msa0026940:intron 15.0%
!! AATAACAAAAAGAACAAAAA+AGG + chr1_1:51074359-51074378 None:intergenic 15.0%
!!! TTTTTGTTCTTTTTGTTATT+AGG - chr1_1:51074359-51074378 Msa0026940:intron 15.0%
!!! TTTTGTTCTTTTTGTTATTA+GGG - chr1_1:51074360-51074379 Msa0026940:intron 15.0%
!!! TATTTTAGAGATATCTTATA+AGG + chr1_1:51074543-51074562 None:intergenic 15.0%
!!! AGATATCTCTAAAATATTTT+CGG - chr1_1:51074547-51074566 Msa0026940:intron 15.0%
!!! TTATGTGTTAAATAAGTTTT+TGG - chr1_1:51074658-51074677 Msa0026940:intron 15.0%
!!! ATATTTTCTATTAGCATTTT+TGG - chr1_1:51074749-51074768 Msa0026940:intron 15.0%
!!! GAAATTTGATATATTTTTAG+AGG - chr1_1:51075036-51075055 Msa0026940:intron 15.0%
!!! ATCCATGAATATTTTTTATT+TGG - chr1_1:51075190-51075209 Msa0026940:intron 15.0%
!! TACCAAATAAAAAATATTCA+TGG + chr1_1:51075195-51075214 None:intergenic 15.0%
!!! ATTTTCTATGTTGTTTTATA+CGG - chr1_1:51075472-51075491 Msa0026940:intron 15.0%
!!! AATAAAACCATTTTTATTGT+AGG - chr1_1:51075670-51075689 Msa0026940:intron 15.0%
!!! TGCAACTAAAAATTTTATTT+TGG + chr1_1:51080071-51080090 None:intergenic 15.0%
!! ATTTACATTTCAATTTCATG+CGG - chr1_1:51066990-51067009 Msa0026940:three_prime_UTR 20.0%
!! AACAAATAGATACAATTCAA+AGG + chr1_1:51067420-51067439 None:intergenic 20.0%
!! AAATTCTGTAAAATTGATTG+TGG - chr1_1:51067480-51067499 Msa0026940:intron 20.0%
!! TCTAACATAAATCCATAAAT+TGG + chr1_1:51067573-51067592 None:intergenic 20.0%
!!! AATTATTATCTAAGATATGG+TGG + chr1_1:51068043-51068062 None:intergenic 20.0%
!!! CAGAATTATTATCTAAGATA+TGG + chr1_1:51068046-51068065 None:intergenic 20.0%
!! ACAATTAAAACATAATGCTA+CGG + chr1_1:51068133-51068152 None:intergenic 20.0%
!! GTATAGGATAAATAGATTTA+GGG - chr1_1:51068373-51068392 Msa0026940:intron 20.0%
!!! GTTTGTTACAATTTTTTATG+TGG - chr1_1:51068814-51068833 Msa0026940:CDS 20.0%
!! AACTTCAAATAATATATGTC+GGG + chr1_1:51069554-51069573 None:intergenic 20.0%
!!! ATATTATTTGAAGTTTGAAC+TGG - chr1_1:51069559-51069578 Msa0026940:intron 20.0%
!!! ATTTGCATTTAATCCTTTTT+GGG + chr1_1:51069626-51069645 None:intergenic 20.0%
!! TGTATATGAATATTAAGGAA+TGG - chr1_1:51069770-51069789 Msa0026940:intron 20.0%
!! GTATATGAATATTAAGGAAT+GGG - chr1_1:51069771-51069790 Msa0026940:intron 20.0%
!!! ATTGTGAGATTTTAGATAAA+AGG - chr1_1:51070565-51070584 Msa0026940:CDS 20.0%
!!! AGTTTTAACTTTTGATGATA+AGG - chr1_1:51070931-51070950 Msa0026940:CDS 20.0%
!! TTTGTATGATTACCAATTAT+TGG - chr1_1:51070995-51071014 Msa0026940:CDS 20.0%
!!! TTACCAATTATTGGAATTTT+AGG - chr1_1:51071004-51071023 Msa0026940:CDS 20.0%
!!! TACCAATTATTGGAATTTTA+GGG - chr1_1:51071005-51071024 Msa0026940:CDS 20.0%
!! TTTGTTAATGTTGAAATTTG+GGG + chr1_1:51071990-51072009 None:intergenic 20.0%
!! TTCAACATTAACAAATAAAG+AGG - chr1_1:51071995-51072014 Msa0026940:CDS 20.0%
!!! TTTCTTCAATTGTAACATTT+TGG + chr1_1:51072249-51072268 None:intergenic 20.0%
!!! AAAACAACATTTTTTGTTTG+TGG - chr1_1:51072266-51072285 Msa0026940:intron 20.0%
!! TTTATAGACGAACAAATAAT+TGG - chr1_1:51073290-51073309 Msa0026940:intron 20.0%
!! AATGAATAACTAATGTTACA+AGG + chr1_1:51073430-51073449 None:intergenic 20.0%
!! TGTTATAAGTTTGTAAAAGT+AGG - chr1_1:51073565-51073584 Msa0026940:CDS 20.0%
!! ATAGATAAAAGAACATTCTT+AGG + chr1_1:51073790-51073809 None:intergenic 20.0%
!!! TTTGTTCTTTTTGTTATTAG+GGG - chr1_1:51074361-51074380 Msa0026940:intron 20.0%
!!! TTTTTAGCATATCTTGAAAA+AGG - chr1_1:51074622-51074641 Msa0026940:intron 20.0%
!! GCTAATAGAAAATATTTGAA+GGG + chr1_1:51074744-51074763 None:intergenic 20.0%
!! TGCTAATAGAAAATATTTGA+AGG + chr1_1:51074745-51074764 None:intergenic 20.0%
!! ACATAATTCAAAATTTGGAA+GGG + chr1_1:51074801-51074820 None:intergenic 20.0%
!! AACATAATTCAAAATTTGGA+AGG + chr1_1:51074802-51074821 None:intergenic 20.0%
!! GCAAAACATAATTCAAAATT+TGG + chr1_1:51074806-51074825 None:intergenic 20.0%
!!! AAAATTCTAAACTTTTGCAA+GGG + chr1_1:51074857-51074876 None:intergenic 20.0%
!!! AAAAATTCTAAACTTTTGCA+AGG + chr1_1:51074858-51074877 None:intergenic 20.0%
!!! CTCAAATGAAATTTTTTAGA+GGG - chr1_1:51075004-51075023 Msa0026940:intron 20.0%
!!! CTTAGATTGGAATTTTAATT+TGG - chr1_1:51075129-51075148 Msa0026940:intron 20.0%
!! TATCTATGTATATCATGTAT+TGG - chr1_1:51075320-51075339 Msa0026940:intron 20.0%
!! ATCTTAATTAATACATGATC+CGG - chr1_1:51075353-51075372 Msa0026940:intron 20.0%
!! AGAACAAAAAAGTAAATACA+AGG + chr1_1:51075967-51075986 None:intergenic 20.0%
!! CCAATAAATAACTTTGATTA+TGG + chr1_1:51076036-51076055 None:intergenic 20.0%
!! CCATAATCAAAGTTATTTAT+TGG - chr1_1:51076033-51076052 Msa0026940:intron 20.0%
!!! AAAATATAAGGGTATTCTAT+AGG + chr1_1:51076130-51076149 None:intergenic 20.0%
!! GACAGATAATCAAAATATAA+GGG + chr1_1:51076141-51076160 None:intergenic 20.0%
!! AGACAGATAATCAAAATATA+AGG + chr1_1:51076142-51076161 None:intergenic 20.0%
!! CATATGAAATGATGAATTAA+TGG + chr1_1:51076592-51076611 None:intergenic 20.0%
!! CTATTACTTATTTATCTTTG+AGG - chr1_1:51076618-51076637 Msa0026940:intron 20.0%
!!! TCATATATACAAGGTTTTAT+TGG - chr1_1:51076797-51076816 Msa0026940:intron 20.0%
!!! TAAGCAAAAAACTACTTTTT+AGG - chr1_1:51076884-51076903 Msa0026940:intron 20.0%
!!! TAAGCAAAAAACTACTTTTT+AGG + chr1_1:51076884-51076903 None:intergenic 20.0%
!! ATATAACAGGTTAACTTATT+TGG + chr1_1:51077624-51077643 None:intergenic 20.0%
!! TTTATAAAGATGGAAACTTT+AGG - chr1_1:51078119-51078138 Msa0026940:intron 20.0%
!! TTATAAAGATGGAAACTTTA+GGG - chr1_1:51078120-51078139 Msa0026940:intron 20.0%
!!! TATTTTTATCGTGAACTAAT+GGG + chr1_1:51078816-51078835 None:intergenic 20.0%
!!! TCTCTTTATAAACGAAATTT+TGG + chr1_1:51079610-51079629 None:intergenic 20.0%
!!! GTTTTTTTTAATGTTCTTAG+AGG + chr1_1:51079664-51079683 None:intergenic 20.0%
!!! CTATAAGTATATTTTAACTG+AGG - chr1_1:51079777-51079796 Msa0026940:intron 20.0%
!!! TTTTTAGTTGCATATAATAG+TGG - chr1_1:51080079-51080098 Msa0026940:CDS 20.0%
!! ACAAAATTGACCAATATATT+TGG - chr1_1:51080198-51080217 Msa0026940:intron 20.0%
!!! TAAAAAGGTTTTGTTGAAAA+AGG - chr1_1:51080790-51080809 Msa0026940:intron 20.0%
!!! AAAAAGGTTTTGTTGAAAAA+GGG - chr1_1:51080791-51080810 Msa0026940:intron 20.0%
!! GAAATGAATAAAGATACAAA+TGG - chr1_1:51081095-51081114 Msa0026940:intron 20.0%
!! AGTAACATAAATAGAGAAAA+AGG + chr1_1:51082124-51082143 None:intergenic 20.0%
!! TAAAATGAGAATAATTGAAG+AGG + chr1_1:51082149-51082168 None:intergenic 20.0%
!!! TTTACATCGATTGAATTATA+TGG - chr1_1:51082584-51082603 Msa0026940:five_prime_UTR 20.0%
! GAAAAAGAAAGTGATAACAA+TGG + chr1_1:51066773-51066792 None:intergenic 25.0%
! AATTCAAATGCAAATGAGTT+CGG + chr1_1:51066967-51066986 None:intergenic 25.0%
!! TATGTTAGAATCAATTTTGG+AGG - chr1_1:51067584-51067603 Msa0026940:intron 25.0%
!!! ATGTAACCTTTAATTTTTCC+AGG - chr1_1:51067846-51067865 Msa0026940:intron 25.0%
!!! TGATTTCTTTTGTTTTCTTG+AGG - chr1_1:51067874-51067893 Msa0026940:intron 25.0%
!!! GATTTCTTTTGTTTTCTTGA+GGG - chr1_1:51067875-51067894 Msa0026940:intron 25.0%
!!! ATTTCTTTTGTTTTCTTGAG+GGG - chr1_1:51067876-51067895 Msa0026940:intron 25.0%
! AAACCTTATAACATCTTCAT+TGG + chr1_1:51067922-51067941 None:intergenic 25.0%
! TTGTTTGATTATACATGTAG+TGG - chr1_1:51067979-51067998 Msa0026940:intron 25.0%
! CAATTAAAACATAATGCTAC+GGG + chr1_1:51068132-51068151 None:intergenic 25.0%
!! TGCCATTCTTTGAAAAATAT+AGG - chr1_1:51068350-51068369 Msa0026940:intron 25.0%
!! GCCATTCTTTGAAAAATATA+GGG - chr1_1:51068351-51068370 Msa0026940:intron 25.0%
!!! ACCCTATATTTTTCAAAGAA+TGG + chr1_1:51068355-51068374 None:intergenic 25.0%
!! CTTTGAAAAATATAGGGTAT+AGG - chr1_1:51068357-51068376 Msa0026940:intron 25.0%
! GGTATAGGATAAATAGATTT+AGG - chr1_1:51068372-51068391 Msa0026940:intron 25.0%
! TTTGAATATGGGTGAAAAAA+TGG - chr1_1:51068443-51068462 Msa0026940:intron 25.0%
!!! ACAATTTTTTATGTGGCATT+AGG - chr1_1:51068821-51068840 Msa0026940:CDS 25.0%
! GTCATATATCACTAAACAAA+TGG - chr1_1:51068846-51068865 Msa0026940:intron 25.0%
!! TTTAAAACTGCAACAAAAAC+AGG + chr1_1:51069115-51069134 None:intergenic 25.0%
! TACAATAATTGTTGAAAGAG+CGG - chr1_1:51069231-51069250 Msa0026940:intron 25.0%
!! TTTGCATTTAATCCTTTTTG+GGG + chr1_1:51069625-51069644 None:intergenic 25.0%
!! GATTTGCATTTAATCCTTTT+TGG + chr1_1:51069627-51069646 None:intergenic 25.0%
! CTTATCCAAATAAAGAAGAA+TGG - chr1_1:51069656-51069675 Msa0026940:intron 25.0%
! AATATTAAGGAATGGGAAAA+TGG - chr1_1:51069778-51069797 Msa0026940:intron 25.0%
! CTGATTCAATTTCAGATTAA+CGG - chr1_1:51069833-51069852 Msa0026940:CDS 25.0%
!!! ATCCATATTTTAACTTTCAC+AGG - chr1_1:51069871-51069890 Msa0026940:CDS 25.0%
! TTCCTGTGAAAGTTAAAATA+TGG + chr1_1:51069876-51069895 None:intergenic 25.0%
! AGGTGAAATATATTAATGCT+AGG - chr1_1:51070128-51070147 Msa0026940:CDS 25.0%
! AAAATTTAGCAATATGTTCC+AGG + chr1_1:51070450-51070469 None:intergenic 25.0%
!! GAACATATTGCTAAATTTTG+TGG - chr1_1:51070451-51070470 Msa0026940:CDS 25.0%
! GTATCTTAGATTATCTCTAT+GGG + chr1_1:51070671-51070690 None:intergenic 25.0%
! TGTATCTTAGATTATCTCTA+TGG + chr1_1:51070672-51070691 None:intergenic 25.0%
! AAAAAAGTTCTGTATTATGC+TGG - chr1_1:51070790-51070809 Msa0026940:CDS 25.0%
! AAAAAAGTTCTGTATTATGC+TGG - chr1_1:51070790-51070809 Msa0026940:CDS 25.0%
! TACCCTAAAATTCCAATAAT+TGG + chr1_1:51071010-51071029 None:intergenic 25.0%
! AAATATGTTATCGACACTTA+TGG - chr1_1:51071248-51071267 Msa0026940:CDS 25.0%
! ACAAAAATACAGAGAAAATG+TGG + chr1_1:51071286-51071305 None:intergenic 25.0%
! GTTTCTTGTTAAATATAAGC+AGG - chr1_1:51071326-51071345 Msa0026940:CDS 25.0%
!!! TTGGTTTTTCTCATCTTTTT+AGG - chr1_1:51071511-51071530 Msa0026940:CDS 25.0%
! TTAGAACATTTGTCATTGTA+TGG - chr1_1:51071614-51071633 Msa0026940:intron 25.0%
! AATACATCTAAGAAAACTAC+AGG + chr1_1:51071672-51071691 None:intergenic 25.0%
!! GTAGTTTTCTTAGATGTATT+TGG - chr1_1:51071672-51071691 Msa0026940:intron 25.0%
!!! TGGTTTTAGTTTTTACTTGT+AGG - chr1_1:51071692-51071711 Msa0026940:intron 25.0%
! AATTTCCAACAGTTAACAAT+GGG + chr1_1:51071792-51071811 None:intergenic 25.0%
! AGTTACAATACTATACAACA+TGG - chr1_1:51072607-51072626 Msa0026940:intron 25.0%
! TTGTTAACAAGATTTAGAGA+TGG + chr1_1:51072678-51072697 None:intergenic 25.0%
!! CAAAGAAAGTATATTGAGAA+TGG + chr1_1:51073047-51073066 None:intergenic 25.0%
!! GTAAAGTCACTTTAGATTTA+AGG + chr1_1:51073075-51073094 None:intergenic 25.0%
!!! TTGTTCTTTTTGTTATTAGG+GGG - chr1_1:51074362-51074381 Msa0026940:intron 25.0%
!!! TGTTTGATTTTGATTGAAGT+TGG - chr1_1:51074426-51074445 Msa0026940:intron 25.0%
!!! GTTTGATTTTGATTGAAGTT+GGG - chr1_1:51074427-51074446 Msa0026940:intron 25.0%
! TTAGAGATATCTTATAAGGT+AGG + chr1_1:51074539-51074558 None:intergenic 25.0%
! GTTTGAAGAAAAACTTTAGA+GGG + chr1_1:51074716-51074735 None:intergenic 25.0%
! TGTTTGAAGAAAAACTTTAG+AGG + chr1_1:51074717-51074736 None:intergenic 25.0%
!!! GCTCAAATGAAATTTTTTAG+AGG - chr1_1:51075003-51075022 Msa0026940:intron 25.0%
! AGAAACTGCAATTAACATTT+GGG + chr1_1:51075068-51075087 None:intergenic 25.0%
! AAGAAACTGCAATTAACATT+TGG + chr1_1:51075069-51075088 None:intergenic 25.0%
!!! GATTGGAATTTTAATTTGGA+TGG - chr1_1:51075133-51075152 Msa0026940:intron 25.0%
!!! TTCATGGATTAGTACTAATA+AGG + chr1_1:51075179-51075198 None:intergenic 25.0%
! AGATAAAAAGTAGAACTTAC+TGG + chr1_1:51075305-51075324 None:intergenic 25.0%
! TTGATTATCTGTCTTTCAAA+TGG - chr1_1:51076148-51076167 Msa0026940:intron 25.0%
!!! TTTTATCGATTTCATCAAGA+TGG - chr1_1:51076446-51076465 Msa0026940:intron 25.0%
!! ACTTATTTATCTTTGAGGAA+AGG - chr1_1:51076623-51076642 Msa0026940:intron 25.0%
! TGAAAATAATAAGTTTCCCT+AGG + chr1_1:51076780-51076799 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + chr1_1:51076983-51077002 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG - chr1_1:51076983-51077002 Msa0026940:CDS 25.0%
! TTCATATTTGACCAAATTGT+TGG - chr1_1:51077020-51077039 Msa0026940:intron 25.0%
! TAATCATTTCAAACATTCCT+TGG + chr1_1:51077048-51077067 None:intergenic 25.0%
! CAGTTAATAAATGAAGAAGA+TGG - chr1_1:51077260-51077279 Msa0026940:intron 25.0%
! TTAATAAATGAAGAAGATGG+AGG - chr1_1:51077263-51077282 Msa0026940:intron 25.0%
!!! CAGAAATTCTAGTTTATCAT+CGG - chr1_1:51077406-51077425 Msa0026940:CDS 25.0%
!!! AGAAATTCTAGTTTATCATC+GGG - chr1_1:51077407-51077426 Msa0026940:CDS 25.0%
!! TAATACTTGTTACCATTCAA+TGG - chr1_1:51077665-51077684 Msa0026940:intron 25.0%
!! GTTTTATAACTTTTTGTGAG+CGG - chr1_1:51077708-51077727 Msa0026940:intron 25.0%
! TTATCGTATAATAGCAATGT+TGG - chr1_1:51077947-51077966 Msa0026940:CDS 25.0%
! TATGATGAAAAATCTGATGA+AGG + chr1_1:51077980-51077999 None:intergenic 25.0%
! TTTCATCATACACAAGTAAA+AGG - chr1_1:51077990-51078009 Msa0026940:CDS 25.0%
! AGGACTATTGAAAAATTACA+AGG - chr1_1:51078010-51078029 Msa0026940:intron 25.0%
!!! GAAGTTATTTTTTCAACACT+TGG - chr1_1:51078432-51078451 Msa0026940:intron 25.0%
! ATATTGGCATCCTAAAATTA+TGG - chr1_1:51078776-51078795 Msa0026940:intron 25.0%
!! ATTTTTATCGTGAACTAATG+GGG + chr1_1:51078815-51078834 None:intergenic 25.0%
!!! GTATTTTTATCGTGAACTAA+TGG + chr1_1:51078817-51078836 None:intergenic 25.0%
!! AATTGTGATAGTGATATTGT+TGG - chr1_1:51079252-51079271 Msa0026940:intron 25.0%
! TATTCCTCAAATTCTTCATA+TGG - chr1_1:51079527-51079546 Msa0026940:intron 25.0%
!!! GATCTTTAATTTGTTATCCT+TGG - chr1_1:51079580-51079599 Msa0026940:intron 25.0%
!!! ATTTTAACTGAGGTATACTT+TGG - chr1_1:51079787-51079806 Msa0026940:intron 25.0%
! GAAGAGAAATCCAAATATAT+TGG + chr1_1:51080211-51080230 None:intergenic 25.0%
! TATATTTGGATTTCTCTTCT+TGG - chr1_1:51080212-51080231 Msa0026940:intron 25.0%
!! TTGGTTTAATGGTTATTTCA+TGG - chr1_1:51080231-51080250 Msa0026940:intron 25.0%
! CATTAATCTGAACAAAAAGA+TGG + chr1_1:51080391-51080410 None:intergenic 25.0%
!! ACATAGTTTTCTTTCTTCTA+AGG - chr1_1:51080623-51080642 Msa0026940:intron 25.0%
!! GTGTTAACTTCAAATTTTTC+AGG - chr1_1:51080825-51080844 Msa0026940:intron 25.0%
!! GTTTTGCTTCTATGTAATTT+TGG - chr1_1:51080937-51080956 Msa0026940:intron 25.0%
!! ATGTTTTATAGCATTACACT+AGG + chr1_1:51081072-51081091 None:intergenic 25.0%
! ATGAATAAAGATACAAATGG+AGG - chr1_1:51081098-51081117 Msa0026940:intron 25.0%
! AATGTAAAAGTTACTAGTTG+TGG + chr1_1:51081175-51081194 None:intergenic 25.0%
!! ACAACTAGTAACTTTTACAT+TGG - chr1_1:51081174-51081193 Msa0026940:intron 25.0%
!! AAGACAAACTTTCTTTTTGT+AGG - chr1_1:51081249-51081268 Msa0026940:intron 25.0%
! TCTCTCTACATAAATAAGAA+AGG + chr1_1:51081314-51081333 None:intergenic 25.0%
! TCTTCTTTAAATGTGTTAAG+AGG + chr1_1:51081753-51081772 None:intergenic 25.0%
! CACATTTAAAGAAGATTAAG+TGG - chr1_1:51081758-51081777 Msa0026940:intron 25.0%
!!! TGTGAAGTAGTATTTTGTTT+CGG - chr1_1:51081807-51081826 Msa0026940:intron 25.0%
!! TTGTTTCTTTCTCTAATTGT+TGG - chr1_1:51082082-51082101 Msa0026940:CDS 25.0%
!!! TTCTCATTTTATGTTGATTG+TGG - chr1_1:51082158-51082177 Msa0026940:CDS 25.0%
! TGGATATTTATATCATGCTT+GGG - chr1_1:51082209-51082228 Msa0026940:CDS 25.0%
!!! ATTGTGTGCATGAAATTTTT+TGG - chr1_1:51082419-51082438 Msa0026940:five_prime_UTR 25.0%
AAGTGATAACAATGGTTATG+AGG + chr1_1:51066765-51066784 None:intergenic 30.0%
ATTCAAATGCAAATGAGTTC+GGG + chr1_1:51066966-51066985 None:intergenic 30.0%
GAATTGTATCTATTTGTTCG+CGG - chr1_1:51067422-51067441 Msa0026940:intron 30.0%
! TGTGGTTAAAAATGAGTTGA+AGG - chr1_1:51067498-51067517 Msa0026940:intron 30.0%
! TTTTGTGATGTAGAGAATCT+AGG - chr1_1:51067656-51067675 Msa0026940:CDS 30.0%
TGAGGATGAAAAACTGATAA+AGG - chr1_1:51067724-51067743 Msa0026940:intron 30.0%
AAACTGATAAAGGTAGTTGT+TGG - chr1_1:51067734-51067753 Msa0026940:intron 30.0%
GAATTTGAAAAAGTGAGATC+AGG - chr1_1:51067760-51067779 Msa0026940:intron 30.0%
!! ACCTTTAATTTTTCCAGGAT+TGG - chr1_1:51067851-51067870 Msa0026940:intron 30.0%
ACCAATCCTGGAAAAATTAA+AGG + chr1_1:51067855-51067874 None:intergenic 30.0%
TGAAGATGTTATAAGGTTTC+TGG - chr1_1:51067923-51067942 Msa0026940:intron 30.0%
AGGTCATAAGTAAGGATTTA+AGG + chr1_1:51068076-51068095 None:intergenic 30.0%
GTTAGAATCTATGATGACAT+TGG - chr1_1:51068319-51068338 Msa0026940:intron 30.0%
AAATGGTGTATATATGTCTG+TGG - chr1_1:51068460-51068479 Msa0026940:CDS 30.0%
AATGGTGTATATATGTCTGT+GGG - chr1_1:51068461-51068480 Msa0026940:CDS 30.0%
!!! TACGATAAAAGTTTTTGGGT+AGG + chr1_1:51068666-51068685 None:intergenic 30.0%
TTTCCAAAATGACGTATGAA+TGG - chr1_1:51068695-51068714 Msa0026940:intron 30.0%
TGCTTTATAACAAGTTATGC+TGG - chr1_1:51068733-51068752 Msa0026940:intron 30.0%
TATGCTGGAAGCTATTTAAT+AGG - chr1_1:51068748-51068767 Msa0026940:intron 30.0%
ATGCTGGAAGCTATTTAATA+GGG - chr1_1:51068749-51068768 Msa0026940:intron 30.0%
ATGTACAACACATATAGCAA+GGG + chr1_1:51068779-51068798 None:intergenic 30.0%
TATGTACAACACATATAGCA+AGG + chr1_1:51068780-51068799 None:intergenic 30.0%
ATGTGTTGTACATACTACAT+AGG - chr1_1:51068786-51068805 Msa0026940:CDS 30.0%
TGTACATACTACATAGGTAT+TGG - chr1_1:51068792-51068811 Msa0026940:CDS 30.0%
! TAAACAAATGGAGTTTTTCG+TGG - chr1_1:51068858-51068877 Msa0026940:intron 30.0%
!! GTTGAAGCTTTTAACTGTTA+TGG + chr1_1:51068967-51068986 None:intergenic 30.0%
! AATGATTCTGTGTGTAGTTT+TGG - chr1_1:51068995-51069014 Msa0026940:CDS 30.0%
TCTATTCTACATGTACTTGA+TGG + chr1_1:51069032-51069051 None:intergenic 30.0%
!!! TGCAGTTTTAAAATACTCTC+TGG - chr1_1:51069123-51069142 Msa0026940:intron 30.0%
!!! GCAGTTTTAAAATACTCTCT+GGG - chr1_1:51069124-51069143 Msa0026940:intron 30.0%
GCTCTTTCAACAATTATTGT+AGG + chr1_1:51069232-51069251 None:intergenic 30.0%
ACAATAATTGTTGAAAGAGC+GGG - chr1_1:51069232-51069251 Msa0026940:intron 30.0%
TGAACATTACCAAAGAAGAA+GGG + chr1_1:51069952-51069971 None:intergenic 30.0%
TTGAACATTACCAAAGAAGA+AGG + chr1_1:51069953-51069972 None:intergenic 30.0%
ATATATTAATGCTAGGCTAG+AGG - chr1_1:51070135-51070154 Msa0026940:CDS 30.0%
TATATTAATGCTAGGCTAGA+GGG - chr1_1:51070136-51070155 Msa0026940:CDS 30.0%
!! TTTGATGAACTTTTAGCCTT+TGG + chr1_1:51070256-51070275 None:intergenic 30.0%
AAAGGCTAAAAGTTCATCAA+AGG - chr1_1:51070255-51070274 Msa0026940:CDS 30.0%
! ATTTTGTGGTCAAAGAATCA+AGG - chr1_1:51070465-51070484 Msa0026940:CDS 30.0%
TTCCTTTCACATACTTTGTT+TGG - chr1_1:51070532-51070551 Msa0026940:CDS 30.0%
TACCAAACAAAGTATGTGAA+AGG + chr1_1:51070537-51070556 None:intergenic 30.0%
TGATCATATATACTGCTAGT+TGG + chr1_1:51070965-51070984 None:intergenic 30.0%
TGTTAAATATAAGCAGGAGA+AGG - chr1_1:51071332-51071351 Msa0026940:CDS 30.0%
ACTATTGCATCAAAGAGTTA+TGG - chr1_1:51071756-51071775 Msa0026940:CDS 30.0%
AATATCCCATTGTTAACTGT+TGG - chr1_1:51071784-51071803 Msa0026940:CDS 30.0%
GAATTTCCAACAGTTAACAA+TGG + chr1_1:51071793-51071812 None:intergenic 30.0%
CTTGAGAAGAGTTTATAAAG+AGG - chr1_1:51071919-51071938 Msa0026940:CDS 30.0%
! GAGGTAAAAGTATAAACCAT+AGG - chr1_1:51072014-51072033 Msa0026940:CDS 30.0%
TGGACTCACATTTAATTGAA+TGG + chr1_1:51072061-51072080 None:intergenic 30.0%
AAATGTGAGTCCATTTATAG+AGG - chr1_1:51072068-51072087 Msa0026940:CDS 30.0%
AAAAACAGCACCTCTATAAA+TGG + chr1_1:51072081-51072100 None:intergenic 30.0%
!!! ATTTATAGAGGTGCTGTTTT+TGG - chr1_1:51072080-51072099 Msa0026940:intron 30.0%
! TTTAGGACTCCAAAAAAACA+CGG + chr1_1:51072345-51072364 None:intergenic 30.0%
AATTGGGAATATTCGTTGTT+TGG - chr1_1:51072527-51072546 Msa0026940:intron 30.0%
GTATTGTAACTGAACAAACT+AGG + chr1_1:51072598-51072617 None:intergenic 30.0%
!! ATTGAAAATTCTAGAGCACT+TGG + chr1_1:51072650-51072669 None:intergenic 30.0%
!!! TGAGATTTTTGAAGTAGCAA+AGG - chr1_1:51072727-51072746 Msa0026940:intron 30.0%
!! ATTGAAAATTCTAGAGCACT+TGG + chr1_1:51072650-51072669 None:intergenic 30.0%
ACAAGATTATAGAGATAGCA+AGG + chr1_1:51072827-51072846 None:intergenic 30.0%
!! TATAGTGGATAAACTCACAA+GGG + chr1_1:51073010-51073029 None:intergenic 30.0%
!! TTATAGTGGATAAACTCACA+AGG + chr1_1:51073011-51073030 None:intergenic 30.0%
GTTGTATCTCAACATTATAG+TGG + chr1_1:51073025-51073044 None:intergenic 30.0%
! AAGTCACTTTAGATTTAAGG+TGG + chr1_1:51073072-51073091 None:intergenic 30.0%
ATAAACTCAATCAAACACGA+AGG - chr1_1:51073102-51073121 Msa0026940:intron 30.0%
AGCTTTCTTAGTTTCATTAG+TGG + chr1_1:51073238-51073257 None:intergenic 30.0%
TATTCCATCATCTTCATAAC+TGG + chr1_1:51073501-51073520 None:intergenic 30.0%
TTCTTAGGATGCTTTACAAA+GGG + chr1_1:51073775-51073794 None:intergenic 30.0%
ATTCTTAGGATGCTTTACAA+AGG + chr1_1:51073776-51073795 None:intergenic 30.0%
TGGATTAAAGAAATCGTCTA+TGG + chr1_1:51073825-51073844 None:intergenic 30.0%
AATCCATAGAATCAGTGAAA+TGG - chr1_1:51073839-51073858 Msa0026940:intron 30.0%
!!! CTGTTACCTTGTTGATTTTA+CGG - chr1_1:51073972-51073991 Msa0026940:intron 30.0%
ATGAAACCGTAAAATCAACA+AGG + chr1_1:51073981-51074000 None:intergenic 30.0%
!!! CTTTTTGAGTTTATCATGCA+TGG - chr1_1:51074001-51074020 Msa0026940:intron 30.0%
AAACCCAAATTTCTATTGCA+TGG - chr1_1:51074179-51074198 Msa0026940:intron 30.0%
TTGATTGAAGTTGGGTTATA+TGG - chr1_1:51074435-51074454 Msa0026940:intron 30.0%
! TGGGTTATATGGATTTTGTA+AGG - chr1_1:51074446-51074465 Msa0026940:intron 30.0%
! TTCTTATTCTGTTGTTTGAC+TGG - chr1_1:51075094-51075113 Msa0026940:intron 30.0%
! TCTTATTCTGTTGTTTGACT+GGG - chr1_1:51075095-51075114 Msa0026940:intron 30.0%
!! TTTGGTATTCGTTTTGTTCT+AGG - chr1_1:51075208-51075227 Msa0026940:intron 30.0%
TCGACAAAAAACATAACAGA+TGG + chr1_1:51075238-51075257 None:intergenic 30.0%
TGCAGATAACTGCATAAAAA+CGG - chr1_1:51075430-51075449 Msa0026940:intron 30.0%
AGGTATGAATTACCTAATCT+TGG - chr1_1:51075619-51075638 Msa0026940:intron 30.0%
GGTATGAATTACCTAATCTT+GGG - chr1_1:51075620-51075639 Msa0026940:intron 30.0%
GTATGAATTACCTAATCTTG+GGG - chr1_1:51075621-51075640 Msa0026940:intron 30.0%
ACATATATATCCCCAAGATT+AGG + chr1_1:51075634-51075653 None:intergenic 30.0%
! GGATATATATGTGAACGTTT+TGG - chr1_1:51075642-51075661 Msa0026940:intron 30.0%
! CTCTTTTGATACTAGAACAT+TGG - chr1_1:51075706-51075725 Msa0026940:intron 30.0%
ACTTATACGAGGATATGATA+AGG - chr1_1:51075760-51075779 Msa0026940:intron 30.0%
!! TATGATAAGGTGTTGTGTTT+CGG - chr1_1:51075773-51075792 Msa0026940:intron 30.0%
! TGTTTTCAACAACTTAAGCT+AGG + chr1_1:51075935-51075954 None:intergenic 30.0%
! ACTGTTTTCTACAGATATGT+TGG + chr1_1:51076238-51076257 None:intergenic 30.0%
CGATAAAAAATCATGTCAGT+TGG + chr1_1:51076434-51076453 None:intergenic 30.0%
!!! CGTGCTATCATTTTTTTGAA+AGG - chr1_1:51076499-51076518 Msa0026940:intron 30.0%
TACATAATGAACATGATAGC+AGG + chr1_1:51076530-51076549 None:intergenic 30.0%
! AATGATGAATTAATGGACGT+AGG + chr1_1:51076585-51076604 None:intergenic 30.0%
! AAATATATCGTTCGGAGTTT+TGG + chr1_1:51076652-51076671 None:intergenic 30.0%
TAAAACAAACTGCATAATGC+AGG + chr1_1:51076730-51076749 None:intergenic 30.0%
CATTGAATAAATGATGCATG+TGG + chr1_1:51076948-51076967 None:intergenic 30.0%
ATTACAATGCGAAACTTGAT+AGG - chr1_1:51077064-51077083 Msa0026940:intron 30.0%
ACAGAATGTTTGCAAAAACT+TGG - chr1_1:51077111-51077130 Msa0026940:intron 30.0%
!! GAAATTCTAGTTTATCATCG+GGG - chr1_1:51077408-51077427 Msa0026940:CDS 30.0%
TAACATCATCAACCATTGAA+TGG + chr1_1:51077680-51077699 None:intergenic 30.0%
! ATCTTTGGAAGCTTGAATTT+GGG + chr1_1:51077918-51077937 None:intergenic 30.0%
! AATCTTTGGAAGCTTGAATT+TGG + chr1_1:51077919-51077938 None:intergenic 30.0%
TTGATGAAAACAGTTACATC+CGG - chr1_1:51078044-51078063 Msa0026940:intron 30.0%
ATGGATGCTCTTTATAAAGA+TGG - chr1_1:51078109-51078128 Msa0026940:intron 30.0%
TCATTACCTTCTCAAAATTC+TGG + chr1_1:51078414-51078433 None:intergenic 30.0%
ATTAAACGAGAAAACACATG+AGG + chr1_1:51078559-51078578 None:intergenic 30.0%
! ATTCATTGCATGCTTGTTAA+AGG + chr1_1:51078740-51078759 None:intergenic 30.0%
TACATTATCAGATGGATCAT+AGG + chr1_1:51079040-51079059 None:intergenic 30.0%
! TATGATCCATCTGATAATGT+AGG - chr1_1:51079039-51079058 Msa0026940:intron 30.0%
! TCTAGAAAAGCACATTACAT+TGG - chr1_1:51079093-51079112 Msa0026940:CDS 30.0%
! CTAGAAAAGCACATTACATT+GGG - chr1_1:51079094-51079113 Msa0026940:CDS 30.0%
TTTAATCAGGTTCGAATCTT+GGG + chr1_1:51079169-51079188 None:intergenic 30.0%
GATTCAATGGATCAAAACTT+TGG - chr1_1:51079306-51079325 Msa0026940:intron 30.0%
GAACATTTAAATATTGCCGA+AGG - chr1_1:51079420-51079439 Msa0026940:CDS 30.0%
!! AACGAAATTTTGGTATTCCA+AGG + chr1_1:51079600-51079619 None:intergenic 30.0%
ATGACTGTATATAAGCATAC+AGG + chr1_1:51079756-51079775 None:intergenic 30.0%
AAGCAAATGATCATTCTGTT+TGG - chr1_1:51079922-51079941 Msa0026940:intron 30.0%
AAAACATCAGTGTGACAATA+AGG + chr1_1:51079982-51080001 None:intergenic 30.0%
GATTTCTCTTCTTGGTTTAA+TGG - chr1_1:51080220-51080239 Msa0026940:intron 30.0%
AGTTGAAATGCTTAAAAACC+AGG - chr1_1:51080348-51080367 Msa0026940:intron 30.0%
! TGCACATATTTTTCCTTTTG+TGG - chr1_1:51080435-51080454 Msa0026940:intron 30.0%
! GCACATATTTTTCCTTTTGT+GGG - chr1_1:51080436-51080455 Msa0026940:intron 30.0%
! AATCTCAACTGAATTTTCCA+TGG + chr1_1:51080519-51080538 None:intergenic 30.0%
AAAGCTGCTTAATGTTACAA+AGG - chr1_1:51080547-51080566 Msa0026940:intron 30.0%
TAAGTTAAGTCAGTTACCTT+GGG + chr1_1:51080581-51080600 None:intergenic 30.0%
TTAAGTTAAGTCAGTTACCT+TGG + chr1_1:51080582-51080601 None:intergenic 30.0%
ATGTACTAGACAAACTAGAA+CGG + chr1_1:51080607-51080626 None:intergenic 30.0%
! TGAATTTTCATCCTTTCTTC+AGG - chr1_1:51080647-51080666 Msa0026940:intron 30.0%
! TCTGAGATAAAACAATTGTC+AGG + chr1_1:51080695-51080714 None:intergenic 30.0%
TCTACACTTAAACATCTGAA+TGG + chr1_1:51080723-51080742 None:intergenic 30.0%
! TCCTCTTTGCTTCTTTAAAA+AGG - chr1_1:51080775-51080794 Msa0026940:intron 30.0%
!! ACCTTTTTAAAGAAGCAAAG+AGG + chr1_1:51080779-51080798 None:intergenic 30.0%
TTGCATAAATTGCTTGACTA+AGG - chr1_1:51080894-51080913 Msa0026940:intron 30.0%
! TGTTGGAATGTTTTTCTGTT+TGG - chr1_1:51081020-51081039 Msa0026940:intron 30.0%
ATTCTTTCTTGCTCAAAGAA+AGG + chr1_1:51081048-51081067 None:intergenic 30.0%
ACAAATGGAGGATTTCTTAT+TGG - chr1_1:51081110-51081129 Msa0026940:intron 30.0%
ATGCTTAAACAATGCCTTAA+GGG + chr1_1:51081152-51081171 None:intergenic 30.0%
TTGATGAGTTAGTTAATAGG+AGG + chr1_1:51081384-51081403 None:intergenic 30.0%
GGATTGATGAGTTAGTTAAT+AGG + chr1_1:51081387-51081406 None:intergenic 30.0%
! AGGATTGTTGTGATTTTGTT+AGG + chr1_1:51081408-51081427 None:intergenic 30.0%
CTGATTGTTGTGATTATGTT+AGG + chr1_1:51081428-51081447 None:intergenic 30.0%
TATTATTTCCCTTCAGATTG+TGG - chr1_1:51081590-51081609 Msa0026940:intron 30.0%
ATTATTTCCCTTCAGATTGT+GGG - chr1_1:51081591-51081610 Msa0026940:intron 30.0%
CTTTAAATGTGTTAAGAGGA+GGG + chr1_1:51081749-51081768 None:intergenic 30.0%
TCTTTAAATGTGTTAAGAGG+AGG + chr1_1:51081750-51081769 None:intergenic 30.0%
!! AGGGAAGTATTAGAAAAAAG+CGG + chr1_1:51082060-51082079 None:intergenic 30.0%
ATTAGAGAAAGAAACAAGCA+GGG + chr1_1:51082079-51082098 None:intergenic 30.0%
AATTAGAGAAAGAAACAAGC+AGG + chr1_1:51082080-51082099 None:intergenic 30.0%
!! CATTTTATGTTGATTGTGGA+TGG - chr1_1:51082162-51082181 Msa0026940:CDS 30.0%
GTGGATATTTATATCATGCT+TGG - chr1_1:51082208-51082227 Msa0026940:CDS 30.0%
! TGAGATTCGATTTGCATAAA+TGG + chr1_1:51082290-51082309 None:intergenic 30.0%
!!! TGTGCATGAAATTTTTTGGT+GGG - chr1_1:51082423-51082442 Msa0026940:five_prime_UTR 30.0%
ATCGATTGAATTATATGGTG+AGG - chr1_1:51082589-51082608 Msa0026940:five_prime_UTR 30.0%
! GAATTATATGGTGAGGTTTT+TGG - chr1_1:51082596-51082615 Msa0026940:five_prime_UTR 30.0%
TGATAACAATGGTTATGAGG+TGG + chr1_1:51066762-51066781 None:intergenic 35.0%
TATAATAGAATGTGGGAGTG+GGG + chr1_1:51066819-51066838 None:intergenic 35.0%
CTATAATAGAATGTGGGAGT+GGG + chr1_1:51066820-51066839 None:intergenic 35.0%
ACTATAATAGAATGTGGGAG+TGG + chr1_1:51066821-51066840 None:intergenic 35.0%
TGGGGACTATAATAGAATGT+GGG + chr1_1:51066826-51066845 None:intergenic 35.0%
!! TTCTAGAAGCTTCTAGAACT+TGG + chr1_1:51067151-51067170 None:intergenic 35.0%
ATGAAGCTTAAAATGATCGC+CGG + chr1_1:51067294-51067313 None:intergenic 35.0%
GAATCAGAAGCTCCAATTTA+TGG - chr1_1:51067558-51067577 Msa0026940:intron 35.0%
AAGTAAGTGTTTGAGTGATG+AGG - chr1_1:51067706-51067725 Msa0026940:CDS 35.0%
TGATAAAGGTAGTTGTTGGT+TGG - chr1_1:51067738-51067757 Msa0026940:intron 35.0%
ACAAAAGAAATCACCAATCC+TGG + chr1_1:51067867-51067886 None:intergenic 35.0%
TATAACATCTTCATTGGCAC+TGG + chr1_1:51067916-51067935 None:intergenic 35.0%
GTGCCAATGAAGATGTTATA+AGG - chr1_1:51067916-51067935 Msa0026940:intron 35.0%
! TGGTGGTATGATTTAGAACT+AGG + chr1_1:51068026-51068045 None:intergenic 35.0%
ATCCTTACTTATGACCTTTC+TGG - chr1_1:51068079-51068098 Msa0026940:intron 35.0%
TCCTTACTTATGACCTTTCT+GGG - chr1_1:51068080-51068099 Msa0026940:intron 35.0%
AGTGAAAATCATTGCACATG+TGG - chr1_1:51068159-51068178 Msa0026940:intron 35.0%
CATGAGATTCTAGTAGTAGT+AGG - chr1_1:51068197-51068216 Msa0026940:intron 35.0%
AGATTCTAGTAGTAGTAGGT+TGG - chr1_1:51068201-51068220 Msa0026940:intron 35.0%
ATGGTGTATATATGTCTGTG+GGG - chr1_1:51068462-51068481 Msa0026940:CDS 35.0%
ATAGGAATTAGGAGCTGAAT+GGG - chr1_1:51068496-51068515 Msa0026940:intron 35.0%
AGTGAATTTCAATGATCTGC+TGG - chr1_1:51068601-51068620 Msa0026940:intron 35.0%
! ATGCCATTCATACGTCATTT+TGG + chr1_1:51068701-51068720 None:intergenic 35.0%
AAATGACGTATGAATGGCAT+AGG - chr1_1:51068701-51068720 Msa0026940:intron 35.0%
! TCTGTCTTGAACATTGCTTT+TGG - chr1_1:51068922-51068941 Msa0026940:intron 35.0%
TGTTATGGAATGCAGAGATT+GGG + chr1_1:51068952-51068971 None:intergenic 35.0%
!! ACATGTACTTGATGGATTCA+TGG + chr1_1:51069024-51069043 None:intergenic 35.0%
GAATAGAACTGAAAAGCGAA+AGG + chr1_1:51069163-51069182 None:intergenic 35.0%
CAATAATTGTTGAAAGAGCG+GGG - chr1_1:51069233-51069252 Msa0026940:intron 35.0%
GTAAAACCCAACAAACATAC+AGG + chr1_1:51069376-51069395 None:intergenic 35.0%
!!! TTAATCCTTTTTGGGGTAAC+AGG + chr1_1:51069618-51069637 None:intergenic 35.0%
GCACTCCATTCTTCTTTATT+TGG + chr1_1:51069664-51069683 None:intergenic 35.0%
AAGGAATGGGAAAATGGAAT+TGG - chr1_1:51069784-51069803 Msa0026940:intron 35.0%
TTGAATCAGTCATACTGTCT+AGG + chr1_1:51069822-51069841 None:intergenic 35.0%
TGCATTTCACATCTGTAGTT+CGG - chr1_1:51070026-51070045 Msa0026940:CDS 35.0%
CATCTACTACTGTGAGTTTA+CGG - chr1_1:51070076-51070095 Msa0026940:CDS 35.0%
TATTTCACCTGAAACCATTG+TGG + chr1_1:51070118-51070137 None:intergenic 35.0%
ATATTAATGCTAGGCTAGAG+GGG - chr1_1:51070137-51070156 Msa0026940:CDS 35.0%
TCTTCAAATGGTATCTCTAG+TGG - chr1_1:51070178-51070197 Msa0026940:CDS 35.0%
ATCTCTAGTGGTTATATCAC+TGG - chr1_1:51070190-51070209 Msa0026940:CDS 35.0%
! TTCTTGGGATTAGCATTCAA+AGG + chr1_1:51070226-51070245 None:intergenic 35.0%
! TCAAAGGAGACATCTCTTTT+TGG - chr1_1:51070271-51070290 Msa0026940:CDS 35.0%
CCACGACAATATACAATATG+TGG + chr1_1:51071210-51071229 None:intergenic 35.0%
CCACATATTGTATATTGTCG+TGG - chr1_1:51071207-51071226 Msa0026940:CDS 35.0%
TGAACCTATCAAGGTGTATT+CGG - chr1_1:51071376-51071395 Msa0026940:CDS 35.0%
!!! AGAATCGAACGTCTTGTTTT+GGG - chr1_1:51071485-51071504 Msa0026940:CDS 35.0%
! AGTTTTTACTTGTAGGCTTG+TGG - chr1_1:51071699-51071718 Msa0026940:intron 35.0%
GAGAAGAGTTTATAAAGAGG+AGG - chr1_1:51071922-51071941 Msa0026940:CDS 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr1_1:51071966-51071985 None:intergenic 35.0%
AAGTATAAACCATAGGTCTG+TGG - chr1_1:51072021-51072040 Msa0026940:CDS 35.0%
AGTATAAACCATAGGTCTGT+GGG - chr1_1:51072022-51072041 Msa0026940:CDS 35.0%
!!! TTCTGAGTATGCTACTTTTC+AGG - chr1_1:51072306-51072325 Msa0026940:intron 35.0%
!!! GCTGATTATCCGTGTTTTTT+TGG - chr1_1:51072333-51072352 Msa0026940:intron 35.0%
TCAGATAGTTGTGTGCTTAA+TGG + chr1_1:51072381-51072400 None:intergenic 35.0%
ATTCCCAATTGCCTAAAACA+GGG + chr1_1:51072517-51072536 None:intergenic 35.0%
TATTCCCAATTGCCTAAAAC+AGG + chr1_1:51072518-51072537 None:intergenic 35.0%
AACAAGATTTAGAGATGGCA+AGG + chr1_1:51072673-51072692 None:intergenic 35.0%
! TAGCAAAGGTTTTCACAAGA+GGG - chr1_1:51072741-51072760 Msa0026940:intron 35.0%
! CAAAGGTTTTCACAAGAAGA+GGG - chr1_1:51072898-51072917 Msa0026940:intron 35.0%
! AAAGGTTTTCACAAGAAGAG+GGG - chr1_1:51072899-51072918 Msa0026940:intron 35.0%
ACAAGTAATGAGGTAGTGTT+TGG - chr1_1:51073143-51073162 Msa0026940:intron 35.0%
CAAGTAATGAGGTAGTGTTT+GGG - chr1_1:51073144-51073163 Msa0026940:intron 35.0%
CCTTCATCTATAAATAGCAG+TGG + chr1_1:51073354-51073373 None:intergenic 35.0%
! CCACTGCTATTTATAGATGA+AGG - chr1_1:51073351-51073370 Msa0026940:intron 35.0%
CACAAGGCTATAAATTTGCA+AGG + chr1_1:51073391-51073410 None:intergenic 35.0%
ACTAATGTTACAAGGTGACT+TGG + chr1_1:51073422-51073441 None:intergenic 35.0%
TTCTCCAGTTATGAAGATGA+TGG - chr1_1:51073494-51073513 Msa0026940:intron 35.0%
AAAGACTTCGCAAAGCTTTA+TGG + chr1_1:51073531-51073550 None:intergenic 35.0%
!! GCATTTGCTATGTACAAAAG+TGG + chr1_1:51073594-51073613 None:intergenic 35.0%
AATGTTGGAGTTCATACATG+CGG - chr1_1:51073648-51073667 Msa0026940:CDS 35.0%
!! AAGCCATTTCACTGATTCTA+TGG + chr1_1:51073845-51073864 None:intergenic 35.0%
! TGTGATATAACTTGTGCTCT+CGG + chr1_1:51074061-51074080 None:intergenic 35.0%
CCTCCATGCAATAGAAATTT+GGG + chr1_1:51074185-51074204 None:intergenic 35.0%
CCAAATTTCTATTGCATGGA+GGG - chr1_1:51074183-51074202 Msa0026940:intron 35.0%
CAAATTTCTATTGCATGGAG+GGG - chr1_1:51074184-51074203 Msa0026940:intron 35.0%
AAATTTCTATTGCATGGAGG+GGG - chr1_1:51074185-51074204 Msa0026940:intron 35.0%
GAACCAAAAATCTCAGTTCT+TGG + chr1_1:51074257-51074276 None:intergenic 35.0%
!!! AGAACTGAGATTTTTGGTTC+AGG - chr1_1:51074257-51074276 Msa0026940:intron 35.0%
CACATGAGTCGCTTAAAAAA+AGG + chr1_1:51074776-51074795 None:intergenic 35.0%
!!! CTTTTTTTAAGCGACTCATG+TGG - chr1_1:51074774-51074793 Msa0026940:intron 35.0%
! GGTTTCAGTTTAGCTTAGAT+TGG - chr1_1:51075116-51075135 Msa0026940:intron 35.0%
!!! TTTTTTGTCGAAAGACCTCT+TGG - chr1_1:51075247-51075266 Msa0026940:intron 35.0%
! TTTTTGTCGAAAGACCTCTT+GGG - chr1_1:51075248-51075267 Msa0026940:intron 35.0%
TAATACATGATCCGGTAATC+AGG - chr1_1:51075361-51075380 Msa0026940:intron 35.0%
CTTCAAAAGAACCTGATTAC+CGG + chr1_1:51075375-51075394 None:intergenic 35.0%
!!! TAATCAGGTTCTTTTGAAGC+TGG - chr1_1:51075376-51075395 Msa0026940:intron 35.0%
CACAGCACCTACAATAAAAA+TGG + chr1_1:51075680-51075699 None:intergenic 35.0%
TAATTATTCCTTACCACGCA+TGG + chr1_1:51076079-51076098 None:intergenic 35.0%
TGTAGAAAACAGTATCCAAG+AGG - chr1_1:51076245-51076264 Msa0026940:intron 35.0%
GTAGAAAACAGTATCCAAGA+GGG - chr1_1:51076246-51076265 Msa0026940:intron 35.0%
!!! CGATCTTTCACTTTTTCCTA+GGG - chr1_1:51076761-51076780 Msa0026940:intron 35.0%
AGCTTGTCAGCATATTAGTT+TGG - chr1_1:51076831-51076850 Msa0026940:intron 35.0%
CATTGAATGAGTGATGAATG+TGG - chr1_1:51076909-51076928 Msa0026940:intron 35.0%
AATGTTTGCAAAAACTTGGC+CGG - chr1_1:51077115-51077134 Msa0026940:intron 35.0%
AAGGGTCAAAGGATGAAAAT+AGG + chr1_1:51077154-51077173 None:intergenic 35.0%
ACTCCTAATCTATCTGGTTA+TGG - chr1_1:51077359-51077378 Msa0026940:intron 35.0%
GTTCCATAACCAGATAGATT+AGG + chr1_1:51077365-51077384 None:intergenic 35.0%
AACTTCAGCTATTGTTGCAA+TGG - chr1_1:51077382-51077401 Msa0026940:intron 35.0%
ATTCAAGCTTCCAAAGATTC+TGG - chr1_1:51077920-51077939 Msa0026940:CDS 35.0%
TGATGAAAACAGTTACATCC+GGG - chr1_1:51078045-51078064 Msa0026940:intron 35.0%
ATATACTGCCTATCCACATT+GGG + chr1_1:51078091-51078110 None:intergenic 35.0%
! AATAGTGGCCTCTGAAAATT+AGG + chr1_1:51078166-51078185 None:intergenic 35.0%
GCTACGTTCTTTCTTAATAG+TGG + chr1_1:51078181-51078200 None:intergenic 35.0%
GATGATAGTCACTTATCTGT+TGG - chr1_1:51078235-51078254 Msa0026940:intron 35.0%
GAGATGTCAAATTATGCAGA+TGG - chr1_1:51078259-51078278 Msa0026940:intron 35.0%
TAACGAGTGAAGGTAATTGA+AGG + chr1_1:51078356-51078375 None:intergenic 35.0%
CAATTACCTTCACTCGTTAT+TGG - chr1_1:51078357-51078376 Msa0026940:intron 35.0%
TTATTGGAGCAAGGTCAAAA+GGG - chr1_1:51078373-51078392 Msa0026940:intron 35.0%
!! AGTAGTCCAGAATTTTGAGA+AGG - chr1_1:51078405-51078424 Msa0026940:intron 35.0%
ACGAATAATATCTGCAAGTG+TGG + chr1_1:51078494-51078513 None:intergenic 35.0%
TGTAACCTTCAAATGGCTTT+CGG + chr1_1:51078522-51078541 None:intergenic 35.0%
AAAGCCATTTGAAGGTTACA+TGG - chr1_1:51078522-51078541 Msa0026940:intron 35.0%
TAACAAGCATGCAATGAATC+CGG - chr1_1:51078741-51078760 Msa0026940:intron 35.0%
! ACTTGGCAAGCCATAATTTT+AGG + chr1_1:51078789-51078808 None:intergenic 35.0%
TTAAGTCTACTTCAATGCGA+GGG + chr1_1:51078975-51078994 None:intergenic 35.0%
ATTAAGTCTACTTCAATGCG+AGG + chr1_1:51078976-51078995 None:intergenic 35.0%
ATCTGCAAAACAAGAAAGAG+CGG - chr1_1:51079001-51079020 Msa0026940:intron 35.0%
GATGTTCCTACATTATCAGA+TGG + chr1_1:51079048-51079067 None:intergenic 35.0%
CATTACATTGGGAGATATTC+TGG - chr1_1:51079105-51079124 Msa0026940:CDS 35.0%
CTTTAATCAGGTTCGAATCT+TGG + chr1_1:51079170-51079189 None:intergenic 35.0%
GATAGTAGCATGAACTTTGA+AGG - chr1_1:51079357-51079376 Msa0026940:intron 35.0%
AGAAAGATGTTCAAAGCCTT+CGG + chr1_1:51079439-51079458 None:intergenic 35.0%
CTCACCATATGAAGAATTTG+AGG + chr1_1:51079534-51079553 None:intergenic 35.0%
AGAGAGACAAATAGATAACG+AGG - chr1_1:51079625-51079644 Msa0026940:intron 35.0%
GAGAGACAAATAGATAACGA+GGG - chr1_1:51079626-51079645 Msa0026940:intron 35.0%
ACGAGGTTGAAACAAAAATG+GGG + chr1_1:51079711-51079730 None:intergenic 35.0%
GACGAGGTTGAAACAAAAAT+GGG + chr1_1:51079712-51079731 None:intergenic 35.0%
TGACGAGGTTGAAACAAAAA+TGG + chr1_1:51079713-51079732 None:intergenic 35.0%
! GAAGCACTATTTCAAGTAAG+CGG - chr1_1:51079868-51079887 Msa0026940:CDS 35.0%
GAACAAAAAGATGGCACAAA+AGG + chr1_1:51080382-51080401 None:intergenic 35.0%
! TTTTCCTTTTGTGGGCATAT+CGG - chr1_1:51080444-51080463 Msa0026940:intron 35.0%
! AATTTTCCATGGCATCTTTC+TGG + chr1_1:51080508-51080527 None:intergenic 35.0%
TGTACTAGACAAACTAGAAC+GGG + chr1_1:51080606-51080625 None:intergenic 35.0%
GACTAAGGTAAAGTGCATAA+AGG - chr1_1:51080909-51080928 Msa0026940:intron 35.0%
!! AACAGCATTGATTAATGTGC+AGG + chr1_1:51081004-51081023 None:intergenic 35.0%
TGCACATTAATCAATGCTGT+TGG - chr1_1:51081003-51081022 Msa0026940:intron 35.0%
AATGATAACAAGTGCCCTTA+AGG - chr1_1:51081135-51081154 Msa0026940:intron 35.0%
GATGCTTAAACAATGCCTTA+AGG + chr1_1:51081153-51081172 None:intergenic 35.0%
TTCCTTAAACAATGCCCTTA+GGG - chr1_1:51081272-51081291 Msa0026940:intron 35.0%
ATTAGTTGAGGAGGAAATGT+TGG + chr1_1:51081484-51081503 None:intergenic 35.0%
TTATTTCCCTTCAGATTGTG+GGG - chr1_1:51081592-51081611 Msa0026940:intron 35.0%
CAAAAGCTTCAAACAATGCA+GGG + chr1_1:51081662-51081681 None:intergenic 35.0%
TGGTCGCATCTATTACTTAA+TGG - chr1_1:51081723-51081742 Msa0026940:intron 35.0%
ATTTCATCCAACTGGAGATT+AGG - chr1_1:51081833-51081852 Msa0026940:intron 35.0%
TTTCATCCAACTGGAGATTA+GGG - chr1_1:51081834-51081853 Msa0026940:intron 35.0%
AAATATGCCACAGGCATTTA+GGG + chr1_1:51081928-51081947 None:intergenic 35.0%
ATAATCCCAAGTGTCAAGTA+GGG + chr1_1:51081988-51082007 None:intergenic 35.0%
AATAATCCCAAGTGTCAAGT+AGG + chr1_1:51081989-51082008 None:intergenic 35.0%
!! GGAAGTATTAGAAAAAAGCG+GGG + chr1_1:51082058-51082077 None:intergenic 35.0%
!! GGGAAGTATTAGAAAAAAGC+GGG + chr1_1:51082059-51082078 None:intergenic 35.0%
!! GAAAGCATTCTTGCCATATT+TGG - chr1_1:51082231-51082250 Msa0026940:CDS 35.0%
!!! GTGTGCATGAAATTTTTTGG+TGG - chr1_1:51082422-51082441 Msa0026940:five_prime_UTR 35.0%
AAATCTGACACTCATCTCAA+GGG + chr1_1:51082504-51082523 None:intergenic 35.0%
!!! TATGGTGAGGTTTTTGGTAA+AGG - chr1_1:51082602-51082621 Msa0026940:five_prime_UTR 35.0%
!!! GAGGTTTTTGGTAAAGGTTA+TGG - chr1_1:51082608-51082627 Msa0026940:five_prime_UTR 35.0%
! CATGTGCTTCTCTTCTTTTC+GGG + chr1_1:51066716-51066735 None:intergenic 40.0%
! CCATGTGCTTCTCTTCTTTT+CGG + chr1_1:51066717-51066736 None:intergenic 40.0%
! AAAGAAGAGAAGCACATGGA+TGG - chr1_1:51066718-51066737 Msa0026940:three_prime_UTR 40.0%
TAACAATGGTTATGAGGTGG+CGG + chr1_1:51066759-51066778 None:intergenic 40.0%
GTGGGGACTATAATAGAATG+TGG + chr1_1:51066827-51066846 None:intergenic 40.0%
GAGAGAGAAAGAGGAAAAGA+TGG + chr1_1:51066888-51066907 None:intergenic 40.0%
GTGAAGTGTAATGGCCTAAT+GGG + chr1_1:51066917-51066936 None:intergenic 40.0%
AGTGAAGTGTAATGGCCTAA+TGG + chr1_1:51066918-51066937 None:intergenic 40.0%
TGTGAGAGAGTGAAGTGTAA+TGG + chr1_1:51066926-51066945 None:intergenic 40.0%
! AATTTCATGCGGTGCTGAAT+CGG - chr1_1:51067001-51067020 Msa0026940:exon 40.0%
!! TAGAAGCTTCTAGAACTTGG+TGG + chr1_1:51067148-51067167 None:intergenic 40.0%
ATCGACGAGTGATGAAACTT+CGG + chr1_1:51067189-51067208 None:intergenic 40.0%
! TTGTTGCTTGGATCTCTTGA+AGG - chr1_1:51067208-51067227 Msa0026940:intron 40.0%
TTGTATCTATTTGTTCGCGG+TGG - chr1_1:51067425-51067444 Msa0026940:intron 40.0%
AGAATCTAGGAATCTGCGTT+TGG - chr1_1:51067669-51067688 Msa0026940:CDS 40.0%
TAGGAATCTGCGTTTGGATT+AGG - chr1_1:51067675-51067694 Msa0026940:CDS 40.0%
ATAACTTTGAGTGTGCGAAG+AGG - chr1_1:51067786-51067805 Msa0026940:intron 40.0%
AAACATAATGCTACGGGCAA+TGG + chr1_1:51068126-51068145 None:intergenic 40.0%
GGCTTGAGAATGATTTGACA+TGG + chr1_1:51068283-51068302 None:intergenic 40.0%
GATAGGAATTAGGAGCTGAA+TGG - chr1_1:51068495-51068514 Msa0026940:CDS 40.0%
TCTGACTATATAACTGCAGC+GGG + chr1_1:51068582-51068601 None:intergenic 40.0%
CTCTGACTATATAACTGCAG+CGG + chr1_1:51068583-51068602 None:intergenic 40.0%
CTGTTATGGAATGCAGAGAT+TGG + chr1_1:51068953-51068972 None:intergenic 40.0%
GGATGACGAATGTCATTGTA+AGG + chr1_1:51069077-51069096 None:intergenic 40.0%
GAAAAGCGAAAGGAAGTTGA+AGG + chr1_1:51069153-51069172 None:intergenic 40.0%
TTGCTTGGACATGCAAAAAC+TGG - chr1_1:51069260-51069279 Msa0026940:intron 40.0%
TCTTCCTCCTGTATGTTTGT+TGG - chr1_1:51069366-51069385 Msa0026940:intron 40.0%
CTTCCTCCTGTATGTTTGTT+GGG - chr1_1:51069367-51069386 Msa0026940:intron 40.0%
AAACCCAACAAACATACAGG+AGG + chr1_1:51069373-51069392 None:intergenic 40.0%
!! AGCAGCTATTTTGTGCATTG+AGG - chr1_1:51069514-51069533 Msa0026940:intron 40.0%
TGATACCTGTTACCCCAAAA+AGG - chr1_1:51069610-51069629 Msa0026940:intron 40.0%
AGGAAATGTATGCACAAGCT+GGG - chr1_1:51069891-51069910 Msa0026940:CDS 40.0%
ACATTACCAAAGAAGAAGGG+AGG + chr1_1:51069949-51069968 None:intergenic 40.0%
TCTGTAGTTCGGACATTTGA+AGG - chr1_1:51070037-51070056 Msa0026940:CDS 40.0%
! CCATTTGAAGACTGAGCTTT+TGG + chr1_1:51070169-51070188 None:intergenic 40.0%
CCAAAAGCTCAGTCTTCAAA+TGG - chr1_1:51070166-51070185 Msa0026940:CDS 40.0%
TCCCAAGAAAAGTAGTCCAA+AGG - chr1_1:51070237-51070256 Msa0026940:CDS 40.0%
!! GCCTTTGGACTACTTTTCTT+GGG + chr1_1:51070241-51070260 None:intergenic 40.0%
!! AGCCTTTGGACTACTTTTCT+TGG + chr1_1:51070242-51070261 None:intergenic 40.0%
! AAGGAGACATCTCTTTTTGG+AGG - chr1_1:51070274-51070293 Msa0026940:CDS 40.0%
TTGTGGTCAAAGAATCAAGG+TGG - chr1_1:51070468-51070487 Msa0026940:CDS 40.0%
TTCTGTATTATGCTGGTGTG+TGG - chr1_1:51070797-51070816 Msa0026940:CDS 40.0%
TCTGTATTATGCTGGTGTGT+GGG - chr1_1:51070798-51070817 Msa0026940:CDS 40.0%
TTCTGTATTATGCTGGTGTG+TGG - chr1_1:51070797-51070816 Msa0026940:CDS 40.0%
TCTGTATTATGCTGGTGTGT+GGG - chr1_1:51070798-51070817 Msa0026940:CDS 40.0%
AGAGAAAATGTGGCTAACGA+GGG + chr1_1:51071276-51071295 None:intergenic 40.0%
GATAGGTTCAATGCCTTTCT+CGG + chr1_1:51071366-51071385 None:intergenic 40.0%
!! GAAAGGCATTGAACCTATCA+AGG - chr1_1:51071367-51071386 Msa0026940:CDS 40.0%
TTCTCCGAATACACCTTGAT+AGG + chr1_1:51071383-51071402 None:intergenic 40.0%
TATCAAGGTGTATTCGGAGA+AGG - chr1_1:51071382-51071401 Msa0026940:CDS 40.0%
ATTCGGAGAAGGAATTCATC+AGG - chr1_1:51071393-51071412 Msa0026940:CDS 40.0%
TTCGGAGAAGGAATTCATCA+GGG - chr1_1:51071394-51071413 Msa0026940:CDS 40.0%
ATCTACCCTTGTACCAGAAA+AGG - chr1_1:51071433-51071452 Msa0026940:CDS 40.0%
!!! GAGAATCGAACGTCTTGTTT+TGG - chr1_1:51071484-51071503 Msa0026940:CDS 40.0%
GTATGGACATCTTTAACACG+AGG - chr1_1:51071631-51071650 Msa0026940:intron 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG - chr1_1:51071886-51071905 Msa0026940:CDS 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG - chr1_1:51071887-51071906 Msa0026940:CDS 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr1_1:51071964-51071983 Msa0026940:CDS 40.0%
!! ATGGTCCAACAAGCTGTTTT+AGG + chr1_1:51072362-51072381 None:intergenic 40.0%
AAGGTCTACCATTGTGAAAC+AGG - chr1_1:51072404-51072423 Msa0026940:intron 40.0%
! TGTTATGCAGACCCTGTTTT+AGG - chr1_1:51072503-51072522 Msa0026940:intron 40.0%
!! AGACCCTGTTTTAGGCAATT+GGG - chr1_1:51072511-51072530 Msa0026940:intron 40.0%
GGAATATTCGTTGTTTGGCT+AGG - chr1_1:51072532-51072551 Msa0026940:intron 40.0%
! GTAGCAAAGGTTTTCACAAG+AGG - chr1_1:51072740-51072759 Msa0026940:intron 40.0%
! AGCAAAGGTTTTCACAAGAG+GGG - chr1_1:51072742-51072761 Msa0026940:intron 40.0%
CGAGATTGTTGAAGTAGCAA+AGG - chr1_1:51072881-51072900 Msa0026940:intron 40.0%
! GCAAAGGTTTTCACAAGAAG+AGG - chr1_1:51072897-51072916 Msa0026940:intron 40.0%
ATCTTGGTTCACCCTTAACA+TGG - chr1_1:51072965-51072984 Msa0026940:intron 40.0%
CTGGACATAGTCCATGTTAA+GGG + chr1_1:51072979-51072998 None:intergenic 40.0%
ACTGGACATAGTCCATGTTA+AGG + chr1_1:51072980-51072999 None:intergenic 40.0%
GAGGATGGTTACAAGTAATG+AGG - chr1_1:51073133-51073152 Msa0026940:intron 40.0%
TAAGAAAGCTTGAGTGTGAG+CGG - chr1_1:51073248-51073267 Msa0026940:intron 40.0%
AAATTTGCAAGGCAGTCTGA+AGG + chr1_1:51073380-51073399 None:intergenic 40.0%
GCCAAAATGTTCTCTACTTC+TGG - chr1_1:51073465-51073484 Msa0026940:intron 40.0%
! GCCAGAAGTAGAGAACATTT+TGG + chr1_1:51073469-51073488 None:intergenic 40.0%
! GTCTTTTAGTACATCCGTCT+TGG - chr1_1:51073623-51073642 Msa0026940:CDS 40.0%
AACTCCAACATTCTCCAAGA+CGG + chr1_1:51073640-51073659 None:intergenic 40.0%
ATGTTGGAGTTCATACATGC+GGG - chr1_1:51073649-51073668 Msa0026940:CDS 40.0%
GCTGAAGGTAATAGAAGTGA+AGG + chr1_1:51073675-51073694 None:intergenic 40.0%
ACTTCTATTACCTTCAGCTC+TGG - chr1_1:51073677-51073696 Msa0026940:intron 40.0%
TCTATTTAGACCAGAGCTGA+AGG + chr1_1:51073690-51073709 None:intergenic 40.0%
CACACAAGTCAACTCGATAT+TGG + chr1_1:51073890-51073909 None:intergenic 40.0%
! GTGATATAACTTGTGCTCTC+GGG + chr1_1:51074060-51074079 None:intergenic 40.0%
TGCGTAAAGTACAGATGTTG+AGG + chr1_1:51074153-51074172 None:intergenic 40.0%
CCCAAATTTCTATTGCATGG+AGG - chr1_1:51074182-51074201 Msa0026940:intron 40.0%
CCCTCCATGCAATAGAAATT+TGG + chr1_1:51074186-51074205 None:intergenic 40.0%
! CAGCCAAGAACTGAGATTTT+TGG - chr1_1:51074251-51074270 Msa0026940:intron 40.0%
!!! AGATTTTTGGTTCAGGACAG+AGG - chr1_1:51074264-51074283 Msa0026940:intron 40.0%
AAGACAGGCGAACATACTAA+GGG + chr1_1:51074298-51074317 None:intergenic 40.0%
TTCATATGCTGAGACAAGAC+AGG + chr1_1:51074313-51074332 None:intergenic 40.0%
GTTCAACATCATCTCAGGTT+TGG + chr1_1:51074578-51074597 None:intergenic 40.0%
! ATTATTAGGCTCTAGCTGAG+AGG + chr1_1:51074600-51074619 None:intergenic 40.0%
ATGCTTCAAAATCACCCAAG+AGG + chr1_1:51075265-51075284 None:intergenic 40.0%
TTTGCACAATCAACTATCCG+AGG + chr1_1:51075571-51075590 None:intergenic 40.0%
TCAGCTGATCGTTGTATTTC+TGG + chr1_1:51075741-51075760 None:intergenic 40.0%
CCTTGCCATCATATTCCTTA+CGG - chr1_1:51076295-51076314 Msa0026940:intron 40.0%
CATCATATTCCTTACGGAGT+CGG - chr1_1:51076301-51076320 Msa0026940:intron 40.0%
ATCATATTCCTTACGGAGTC+GGG - chr1_1:51076302-51076321 Msa0026940:intron 40.0%
!!! GCGATCTTTCACTTTTTCCT+AGG - chr1_1:51076760-51076779 Msa0026940:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr1_1:51076987-51077006 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr1_1:51076986-51077005 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr1_1:51076986-51077005 Msa0026940:CDS 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr1_1:51076987-51077006 Msa0026940:CDS 40.0%
ATGAAAAATGCTACTCCCTC+CGG + chr1_1:51077005-51077024 None:intergenic 40.0%
ATTCCTTGGCACCAACAATT+TGG + chr1_1:51077034-51077053 None:intergenic 40.0%
AATGCGAAACTTGATAGGTG+CGG - chr1_1:51077069-51077088 Msa0026940:intron 40.0%
AAAGGATGAAAATAGGCGAC+GGG + chr1_1:51077147-51077166 None:intergenic 40.0%
CAAAGGATGAAAATAGGCGA+CGG + chr1_1:51077148-51077167 None:intergenic 40.0%
CTTTGACCCTTCTATTCAGA+GGG - chr1_1:51077163-51077182 Msa0026940:intron 40.0%
CACATACCCTCTGAATAGAA+GGG + chr1_1:51077172-51077191 None:intergenic 40.0%
ACACATACCCTCTGAATAGA+AGG + chr1_1:51077173-51077192 None:intergenic 40.0%
AAGAAGATGGAGGCAAACAT+AGG - chr1_1:51077273-51077292 Msa0026940:intron 40.0%
ATTAGGAGTTGAAGCTTGAC+TGG + chr1_1:51077348-51077367 None:intergenic 40.0%
GCTTCAACTCCTAATCTATC+TGG - chr1_1:51077353-51077372 Msa0026940:intron 40.0%
TTGTGAAAGAAGAACACCAG+AGG + chr1_1:51077444-51077463 None:intergenic 40.0%
CTTTCACAAGCTAAGTCACT+TGG - chr1_1:51077455-51077474 Msa0026940:CDS 40.0%
CAAGCTAAGTCACTTGGTAA+TGG - chr1_1:51077461-51077480 Msa0026940:CDS 40.0%
! CGATCTTCAAGTTTGGATCT+AGG - chr1_1:51077596-51077615 Msa0026940:intron 40.0%
AGGTGACTCTGTTGTTAAAG+GGG + chr1_1:51077834-51077853 None:intergenic 40.0%
CAGGTGACTCTGTTGTTAAA+GGG + chr1_1:51077835-51077854 None:intergenic 40.0%
! CGATAACTTGCCAGAATCTT+TGG + chr1_1:51077933-51077952 None:intergenic 40.0%
ATATGAACCCCAATGTGGAT+AGG - chr1_1:51078080-51078099 Msa0026940:intron 40.0%
TATACTGCCTATCCACATTG+GGG + chr1_1:51078090-51078109 None:intergenic 40.0%
CATATACTGCCTATCCACAT+TGG + chr1_1:51078092-51078111 None:intergenic 40.0%
CAATGTGGATAGGCAGTATA+TGG - chr1_1:51078090-51078109 Msa0026940:intron 40.0%
! GTTGTGTGCCTAATTTTCAG+AGG - chr1_1:51078155-51078174 Msa0026940:intron 40.0%
TGAACTAAGTCCTTCACTCA+GGG + chr1_1:51078305-51078324 None:intergenic 40.0%
GTTATTGGAGCAAGGTCAAA+AGG - chr1_1:51078372-51078391 Msa0026940:intron 40.0%
! GCATGTGCGATTTTATGATG+GGG + chr1_1:51078463-51078482 None:intergenic 40.0%
! CGCATGTGCGATTTTATGAT+GGG + chr1_1:51078464-51078483 None:intergenic 40.0%
CCATCATAAAATCGCACATG+CGG - chr1_1:51078462-51078481 Msa0026940:intron 40.0%
CGTTCCATGTAACCTTCAAA+TGG + chr1_1:51078529-51078548 None:intergenic 40.0%
TACGTTCTCTTGACGAACAA+AGG - chr1_1:51078671-51078690 Msa0026940:intron 40.0%
TAAGTCTACTTCAATGCGAG+GGG + chr1_1:51078974-51078993 None:intergenic 40.0%
AGATGGATCATAGGAAGACT+TGG + chr1_1:51079031-51079050 None:intergenic 40.0%
TACATTGGGAGATATTCTGG+TGG - chr1_1:51079108-51079127 Msa0026940:CDS 40.0%
GACAGTGTAAGCAAGATCTT+TGG + chr1_1:51079286-51079305 None:intergenic 40.0%
!! TGCTTACACTGTCGATTCAA+TGG - chr1_1:51079293-51079312 Msa0026940:intron 40.0%
TACTATCCACGTATCCAAGT+CGG + chr1_1:51079344-51079363 None:intergenic 40.0%
CCATTAACATCCACATCAGA+TGG + chr1_1:51079387-51079406 None:intergenic 40.0%
CCATCTGATGTGGATGTTAA+TGG - chr1_1:51079384-51079403 Msa0026940:intron 40.0%
AGACAAATAGATAACGAGGG+AGG - chr1_1:51079629-51079648 Msa0026940:intron 40.0%
GACAAATAGATAACGAGGGA+GGG - chr1_1:51079630-51079649 Msa0026940:intron 40.0%
TTGTCTGTGTAGATATGCAG+TGG - chr1_1:51079837-51079856 Msa0026940:CDS 40.0%
TGTCTGTGTAGATATGCAGT+GGG - chr1_1:51079838-51079857 Msa0026940:CDS 40.0%
TGATCATTCTGTTTGGATCC+AGG - chr1_1:51079929-51079948 Msa0026940:intron 40.0%
CTCATCAAATCAAACATGCC+TGG + chr1_1:51079950-51079969 None:intergenic 40.0%
! TTTCCTTTTGTGGGCATATC+GGG - chr1_1:51080445-51080464 Msa0026940:intron 40.0%
TTGTTTCCAGAAAGATGCCA+TGG - chr1_1:51080499-51080518 Msa0026940:intron 40.0%
TACAAAGGATACTGTTCCCA+AGG - chr1_1:51080562-51080581 Msa0026940:intron 40.0%
! TTCGTTTGAGACCTGAAGAA+AGG + chr1_1:51080661-51080680 None:intergenic 40.0%
!!! GGTTTTGTTGAAAAAGGGAG+TGG - chr1_1:51080796-51080815 Msa0026940:intron 40.0%
GTTCCTTAAACAATGCCCTT+AGG - chr1_1:51081271-51081290 Msa0026940:intron 40.0%
TTTGCTAACAAGTGCCCTAA+GGG + chr1_1:51081289-51081308 None:intergenic 40.0%
! TTTTGCTAACAAGTGCCCTA+AGG + chr1_1:51081290-51081309 None:intergenic 40.0%
! AACGTGACACAGATTAGTTG+AGG + chr1_1:51081496-51081515 None:intergenic 40.0%
CGTTGTAGCCATACTACATA+CGG - chr1_1:51081512-51081531 Msa0026940:intron 40.0%
GTGTAACTCCGTATGTAGTA+TGG + chr1_1:51081523-51081542 None:intergenic 40.0%
AACAATGCAGGGAGAAATGA+GGG + chr1_1:51081651-51081670 None:intergenic 40.0%
AAACAATGCAGGGAGAAATG+AGG + chr1_1:51081652-51081671 None:intergenic 40.0%
CCAAAAGCTTCAAACAATGC+AGG + chr1_1:51081663-51081682 None:intergenic 40.0%
!! CCTGCATTGTTTGAAGCTTT+TGG - chr1_1:51081660-51081679 Msa0026940:intron 40.0%
! GGATATTCGTAAGGTACTTG+AGG - chr1_1:51081695-51081714 Msa0026940:intron 40.0%
!! GTAAGGTACTTGAGGTCTTT+TGG - chr1_1:51081703-51081722 Msa0026940:intron 40.0%
TTCGGACAATTTCATCCAAC+TGG - chr1_1:51081825-51081844 Msa0026940:intron 40.0%
TTCATCCAACTGGAGATTAG+GGG - chr1_1:51081835-51081854 Msa0026940:intron 40.0%
!! TGTGTATGGTTTTGCAACCA+TGG - chr1_1:51081858-51081877 Msa0026940:intron 40.0%
! ATGGTTTGAGAGCATGGTTT+GGG - chr1_1:51081877-51081896 Msa0026940:intron 40.0%
CAAATATGCCACAGGCATTT+AGG + chr1_1:51081929-51081948 None:intergenic 40.0%
CTAAATGCCTGTGGCATATT+TGG - chr1_1:51081927-51081946 Msa0026940:intron 40.0%
TTAAGTGCCAAATATGCCAC+AGG + chr1_1:51081937-51081956 None:intergenic 40.0%
!! GGGGAAGTATTAGAAACAAG+CGG + chr1_1:51082039-51082058 None:intergenic 40.0%
!!! GACTGTTGTTTTCTGTCTAG+TGG - chr1_1:51082189-51082208 Msa0026940:CDS 40.0%
GCATTCTTGCCATATTTGGA+AGG - chr1_1:51082235-51082254 Msa0026940:CDS 40.0%
CTGCTTAGTCCTTCCAAATA+TGG + chr1_1:51082247-51082266 None:intergenic 40.0%
CAAATCGAATCTCACATGCA+AGG - chr1_1:51082296-51082315 Msa0026940:five_prime_UTR 40.0%
! TATCGATTAGCAGGTTCACT+GGG - chr1_1:51082342-51082361 Msa0026940:five_prime_UTR 40.0%
TTCACTGGGTAGTACATTTG+TGG - chr1_1:51082356-51082375 Msa0026940:five_prime_UTR 40.0%
TCACTGGGTAGTACATTTGT+GGG - chr1_1:51082357-51082376 Msa0026940:five_prime_UTR 40.0%
ACACTCATCTCAAGGGAAAA+GGG + chr1_1:51082497-51082516 None:intergenic 40.0%
CAAATCTGACACTCATCTCA+AGG + chr1_1:51082505-51082524 None:intergenic 40.0%
CTTGAGATGAGTGTCAGATT+TGG - chr1_1:51082503-51082522 Msa0026940:five_prime_UTR 40.0%
! CCGAAAAGAAGAGAAGCACA+TGG - chr1_1:51066714-51066733 Msa0026940:three_prime_UTR 45.0%
TCTCTCTCTACACTCCCATT+AGG - chr1_1:51066900-51066919 Msa0026940:three_prime_UTR 45.0%
TGGTGGTTCAGATCTGGTTA+TGG + chr1_1:51067033-51067052 None:intergenic 45.0%
CATTGTGAAGGGATTGGATC+TGG + chr1_1:51067060-51067079 None:intergenic 45.0%
CAGATCCAATCCCTTCACAA+TGG - chr1_1:51067058-51067077 Msa0026940:CDS 45.0%
ATCCAATCCCTTCACAATGG+AGG - chr1_1:51067061-51067080 Msa0026940:CDS 45.0%
TTCCTCCATTGTGAAGGGAT+TGG + chr1_1:51067066-51067085 None:intergenic 45.0%
AGTGCTTCCTCCATTGTGAA+GGG + chr1_1:51067071-51067090 None:intergenic 45.0%
! ATCACTCGTCGATTGTTGCT+TGG - chr1_1:51067196-51067215 Msa0026940:intron 45.0%
! TAGTAGTTTTCGCGTTTCGC+AGG - chr1_1:51067232-51067251 Msa0026940:intron 45.0%
! AGTAGTTTTCGCGTTTCGCA+GGG - chr1_1:51067233-51067252 Msa0026940:intron 45.0%
TCATTTCAACGCGCTTGTTC+CGG - chr1_1:51067310-51067329 Msa0026940:intron 45.0%
CTTCTAGCAGCATCTCTAAC+AGG + chr1_1:51067368-51067387 None:intergenic 45.0%
AAGACTCTTGCTCACTCTCA+TGG - chr1_1:51067385-51067404 Msa0026940:intron 45.0%
GCCCAGAAAGGTCATAAGTA+AGG + chr1_1:51068084-51068103 None:intergenic 45.0%
CAAATCATTCTCAAGCCTGC+TGG - chr1_1:51068286-51068305 Msa0026940:intron 45.0%
TATATATGTCTGTGGGGCAG+TGG - chr1_1:51068468-51068487 Msa0026940:CDS 45.0%
TAGACCGATTGCAGATGTCA+CGG + chr1_1:51069311-51069330 None:intergenic 45.0%
CTACTGAACTACCCCTTCAA+CGG - chr1_1:51069338-51069357 Msa0026940:intron 45.0%
TACTGAACTACCCCTTCAAC+GGG - chr1_1:51069339-51069358 Msa0026940:intron 45.0%
AGGAAGAATAGCCCGTTGAA+GGG + chr1_1:51069353-51069372 None:intergenic 45.0%
TGCACAAAATAGCTGCTTCC+CGG + chr1_1:51069511-51069530 None:intergenic 45.0%
CAGGAAATGTATGCACAAGC+TGG - chr1_1:51069890-51069909 Msa0026940:CDS 45.0%
! CATTTTGCACTGCACCACAA+TGG - chr1_1:51070101-51070120 Msa0026940:CDS 45.0%
ACTAATTTCCTGCACAGTCC+TGG - chr1_1:51070429-51070448 Msa0026940:CDS 45.0%
AATATGTTCCAGGACTGTGC+AGG + chr1_1:51070440-51070459 None:intergenic 45.0%
! TATTGTCGTGGTTCTGTGTC+TGG - chr1_1:51071219-51071238 Msa0026940:CDS 45.0%
CAGAGAAAATGTGGCTAACG+AGG + chr1_1:51071277-51071296 None:intergenic 45.0%
!! CCAGTCCTTTTCTGGTACAA+GGG + chr1_1:51071441-51071460 None:intergenic 45.0%
!! ACCAGTCCTTTTCTGGTACA+AGG + chr1_1:51071442-51071461 None:intergenic 45.0%
AAGACGTTCGATTCTCTGCA+GGG + chr1_1:51071480-51071499 None:intergenic 45.0%
!!! ATCGAACGTCTTGTTTTGGG+AGG - chr1_1:51071488-51071507 Msa0026940:CDS 45.0%
!!! AACGTCTTGTTTTGGGAGGT+TGG - chr1_1:51071492-51071511 Msa0026940:CDS 45.0%
AGAGAGAGGGGGGAAAAAAT+TGG + chr1_1:51071574-51071593 None:intergenic 45.0%
GGACATCTTTAACACGAGGT+TGG - chr1_1:51071635-51071654 Msa0026940:intron 45.0%
!! TTAACACGAGGTTGGTGTGA+AGG - chr1_1:51071643-51071662 Msa0026940:intron 45.0%
GTCGCAATTTAGACGACTAG+GGG + chr1_1:51071834-51071853 None:intergenic 45.0%
GGTCGCAATTTAGACGACTA+GGG + chr1_1:51071835-51071854 None:intergenic 45.0%
AGGTCGCAATTTAGACGACT+AGG + chr1_1:51071836-51071855 None:intergenic 45.0%
GTCGTCTAAATTGCGACCTT+TGG - chr1_1:51071837-51071856 Msa0026940:CDS 45.0%
CTGCAATGAAGGCAAACCAA+AGG + chr1_1:51071856-51071875 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG + chr1_1:51071879-51071898 None:intergenic 45.0%
CTCCAACACCTTCATTGTGT+TGG - chr1_1:51071877-51071896 Msa0026940:CDS 45.0%
! AGCCAACACAATGAAGGTGT+TGG + chr1_1:51071882-51071901 None:intergenic 45.0%
CCTCAAAGCCAACACAATGA+AGG + chr1_1:51071888-51071907 None:intergenic 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG - chr1_1:51071885-51071904 Msa0026940:CDS 45.0%
!! TCATTGTGTTGGCTTTGAGG+GGG - chr1_1:51071888-51071907 Msa0026940:CDS 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr1_1:51071957-51071976 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr1_1:51071954-51071973 Msa0026940:CDS 45.0%
ATAGGTCTGTGGGTGTTTGA+GGG - chr1_1:51072032-51072051 Msa0026940:CDS 45.0%
GGAGTCCTAAAACAGCTTGT+TGG - chr1_1:51072354-51072373 Msa0026940:intron 45.0%
GCACACAACTATCTGATCGA+AGG - chr1_1:51072385-51072404 Msa0026940:intron 45.0%
! TCAGAGCACCTGTTTCACAA+TGG + chr1_1:51072415-51072434 None:intergenic 45.0%
!! CAGACCCTGTTTTAGGCAAT+TGG - chr1_1:51072510-51072529 Msa0026940:intron 45.0%
ATCCTCCTTTGAGCAAGCTT+AGG - chr1_1:51072572-51072591 Msa0026940:intron 45.0%
! TCTAGAGCACTTGGTCATAG+AGG + chr1_1:51072641-51072660 None:intergenic 45.0%
! TCTAGAGCACTTGGTCATAG+AGG + chr1_1:51072641-51072660 None:intergenic 45.0%
! GGATAAACTCACAAGGGTGT+GGG + chr1_1:51073004-51073023 None:intergenic 45.0%
TGGATAAACTCACAAGGGTG+TGG + chr1_1:51073005-51073024 None:intergenic 45.0%
AAACACGAAGGAATGACTCG+AGG - chr1_1:51073114-51073133 Msa0026940:intron 45.0%
ACATCCGTCTTGGAGAATGT+TGG - chr1_1:51073633-51073652 Msa0026940:CDS 45.0%
ATAGTGCTAGCACATGAGCA+TGG - chr1_1:51073716-51073735 Msa0026940:intron 45.0%
CAAGACAGGCGAACATACTA+AGG + chr1_1:51074299-51074318 None:intergenic 45.0%
GAGAGGTTCAACATCATCTC+AGG + chr1_1:51074583-51074602 None:intergenic 45.0%
GCGTAGCATCTGGAAAATAG+AGG + chr1_1:51075524-51075543 None:intergenic 45.0%
CTTTGCAATTGCGTAGCATC+TGG + chr1_1:51075534-51075553 None:intergenic 45.0%
!! TTGCACGAAGTATTGCACTG+CGG + chr1_1:51075600-51075619 None:intergenic 45.0%
!! CGTTGTATTTCTGGTGCATC+AGG + chr1_1:51075732-51075751 None:intergenic 45.0%
! ACGATCAGCTGACTTATACG+AGG - chr1_1:51075749-51075768 Msa0026940:intron 45.0%
TGTTGTGTTTCGGACGCAAT+GGG - chr1_1:51075783-51075802 Msa0026940:intron 45.0%
GATGCAACTGCATTGCATGA+TGG + chr1_1:51075913-51075932 None:intergenic 45.0%
! TGTGTCTTATTGTCCATGCG+TGG - chr1_1:51076063-51076082 Msa0026940:intron 45.0%
CTTATTGTCCATGCGTGGTA+AGG - chr1_1:51076068-51076087 Msa0026940:intron 45.0%
AGGAATATGATGGCAAGGAG+TGG + chr1_1:51076293-51076312 None:intergenic 45.0%
CCGTAAGGAATATGATGGCA+AGG + chr1_1:51076298-51076317 None:intergenic 45.0%
CGACTCCGTAAGGAATATGA+TGG + chr1_1:51076303-51076322 None:intergenic 45.0%
!! TGACCAAATTGTTGGTGCCA+AGG - chr1_1:51077028-51077047 Msa0026940:intron 45.0%
CCTCTGAATAGAAGGGTCAA+AGG + chr1_1:51077165-51077184 None:intergenic 45.0%
CCTTTGACCCTTCTATTCAG+AGG - chr1_1:51077162-51077181 Msa0026940:intron 45.0%
GCACTTCTATCACGAATGGA+AGG + chr1_1:51077311-51077330 None:intergenic 45.0%
TGGTGCACTTCTATCACGAA+TGG + chr1_1:51077315-51077334 None:intergenic 45.0%
GCTTGACTGGAAGATGACAT+TGG + chr1_1:51077335-51077354 None:intergenic 45.0%
ACTGCATGCAAGCAAACAGA+AGG - chr1_1:51077508-51077527 Msa0026940:intron 45.0%
! GCTATTGAGAGCATGCTTAG+AGG - chr1_1:51077536-51077555 Msa0026940:intron 45.0%
! TGCTCTGCGATCTTCAAGTT+TGG - chr1_1:51077589-51077608 Msa0026940:intron 45.0%
! TCTCTTATTTCCCCTAGTGC+AGG - chr1_1:51077740-51077759 Msa0026940:intron 45.0%
TGACTCTGTTGTTAAAGGGG+TGG + chr1_1:51077831-51077850 None:intergenic 45.0%
CCAGGTGACTCTGTTGTTAA+AGG + chr1_1:51077836-51077855 None:intergenic 45.0%
CCTTTAACAACAGAGTCACC+TGG - chr1_1:51077833-51077852 Msa0026940:intron 45.0%
AACAACAGAGTCACCTGGTT+TGG - chr1_1:51077838-51077857 Msa0026940:intron 45.0%
ACAACAGAGTCACCTGGTTT+GGG - chr1_1:51077839-51077858 Msa0026940:intron 45.0%
AATAGAGGCAGTATCCGGAA+CGG - chr1_1:51077866-51077885 Msa0026940:CDS 45.0%
CTGAACTAAGTCCTTCACTC+AGG + chr1_1:51078306-51078325 None:intergenic 45.0%
CTGAGTGAAGGACTTAGTTC+AGG - chr1_1:51078304-51078323 Msa0026940:intron 45.0%
! GACTTAGTTCAGGTTCTGAC+TGG - chr1_1:51078314-51078333 Msa0026940:intron 45.0%
GTAATTGAAGGCAGAAACCC+TGG + chr1_1:51078344-51078363 None:intergenic 45.0%
CTTGCTCCAATAACGAGTGA+AGG + chr1_1:51078366-51078385 None:intergenic 45.0%
CTTCACTCGTTATTGGAGCA+AGG - chr1_1:51078364-51078383 Msa0026940:intron 45.0%
! CCGCATGTGCGATTTTATGA+TGG + chr1_1:51078465-51078484 None:intergenic 45.0%
ACATGCCGAAAGCCATTTGA+AGG - chr1_1:51078514-51078533 Msa0026940:intron 45.0%
! TTGACCCCAAAGAGCTTGTT+AGG - chr1_1:51078578-51078597 Msa0026940:intron 45.0%
CTTGCCTAACAAGCTCTTTG+GGG + chr1_1:51078585-51078604 None:intergenic 45.0%
GCTTGCCTAACAAGCTCTTT+GGG + chr1_1:51078586-51078605 None:intergenic 45.0%
TGCTTGCCTAACAAGCTCTT+TGG + chr1_1:51078587-51078606 None:intergenic 45.0%
TCAAGAGAACGTAGCAATGC+GGG + chr1_1:51078664-51078683 None:intergenic 45.0%
GTCAAGAGAACGTAGCAATG+CGG + chr1_1:51078665-51078684 None:intergenic 45.0%
AAGCATGCAATGAATCCGGA+AGG - chr1_1:51078745-51078764 Msa0026940:intron 45.0%
CCAATATTTGCAGCACCTTC+CGG + chr1_1:51078763-51078782 None:intergenic 45.0%
GTGAACTAATGGGGCTAACT+TGG + chr1_1:51078806-51078825 None:intergenic 45.0%
! TGTAGGAACATCCTCTGAAG+AGG - chr1_1:51079056-51079075 Msa0026940:intron 45.0%
! GTAGGAACATCCTCTGAAGA+GGG - chr1_1:51079057-51079076 Msa0026940:intron 45.0%
! TCCTCTGAAGAGGGATATGT+TGG - chr1_1:51079066-51079085 Msa0026940:CDS 45.0%
ACCAACATATCCCTCTTCAG+AGG + chr1_1:51079070-51079089 None:intergenic 45.0%
GGTGGTTCTCTAGATAGTGA+TGG - chr1_1:51079126-51079145 Msa0026940:CDS 45.0%
GGTTCTCTAGATAGTGATGG+TGG - chr1_1:51079129-51079148 Msa0026940:CDS 45.0%
!! ATAGTGATGGTGGCAGGAAA+TGG - chr1_1:51079139-51079158 Msa0026940:CDS 45.0%
AACCTGATTAAAGCCAGTCG+TGG - chr1_1:51079177-51079196 Msa0026940:CDS 45.0%
TGAAGGTTTGCCATCTGATG+TGG - chr1_1:51079374-51079393 Msa0026940:intron 45.0%
GTCAACCACATGACAAACAC+AGG - chr1_1:51079498-51079517 Msa0026940:intron 45.0%
TGAGTCCTGTGTTTGTCATG+TGG + chr1_1:51079506-51079525 None:intergenic 45.0%
GTCTGTGTAGATATGCAGTG+GGG - chr1_1:51079839-51079858 Msa0026940:CDS 45.0%
TCTGTGTAGATATGCAGTGG+GGG - chr1_1:51079840-51079859 Msa0026940:CDS 45.0%
GATATTGACCGTTGTGCTTG+AGG - chr1_1:51080276-51080295 Msa0026940:intron 45.0%
ATCTAGCACCTCAAGCACAA+CGG + chr1_1:51080287-51080306 None:intergenic 45.0%
AAGAGCAAGCTCTCTGATTG+AGG + chr1_1:51080320-51080339 None:intergenic 45.0%
GCACAAAAGGAGTAAGAACC+TGG + chr1_1:51080369-51080388 None:intergenic 45.0%
TATCCCGATATGCCCACAAA+AGG + chr1_1:51080451-51080470 None:intergenic 45.0%
TCTTCAGGTCTCAAACGAAG+CGG - chr1_1:51080662-51080681 Msa0026940:intron 45.0%
TCAGGTCATTATCCCTCTAC+TGG - chr1_1:51080843-51080862 Msa0026940:intron 45.0%
! GACTAGAGTTTTCTCGTCCT+CGG + chr1_1:51080872-51080891 None:intergenic 45.0%
!! TGCCCTAAGGGCATTGTTTA+AGG + chr1_1:51081277-51081296 None:intergenic 45.0%
! GTGACACAGATTAGTTGAGG+AGG + chr1_1:51081493-51081512 None:intergenic 45.0%
!! AGCTTTTGGAAACCAGAGTG+CGG - chr1_1:51081674-51081693 Msa0026940:intron 45.0%
CAAACCATGCTCTCAAACCA+TGG + chr1_1:51081878-51081897 None:intergenic 45.0%
! CATGGTTTGAGAGCATGGTT+TGG - chr1_1:51081876-51081895 Msa0026940:intron 45.0%
! TGGTTTGAGAGCATGGTTTG+GGG - chr1_1:51081878-51081897 Msa0026940:intron 45.0%
! CATTTAGGGTGTGCTCAGTT+TGG + chr1_1:51081914-51081933 None:intergenic 45.0%
TAGCATCCCTACTTGACACT+TGG - chr1_1:51081979-51081998 Msa0026940:CDS 45.0%
AGCATCCCTACTTGACACTT+GGG - chr1_1:51081980-51081999 Msa0026940:CDS 45.0%
AAGCAGCACACAGTTGAAGT+TGG - chr1_1:51082261-51082280 Msa0026940:CDS 45.0%
! TGATGCTGCTATCGATTAGC+AGG - chr1_1:51082333-51082352 Msa0026940:five_prime_UTR 45.0%
! CTATCGATTAGCAGGTTCAC+TGG - chr1_1:51082341-51082360 Msa0026940:five_prime_UTR 45.0%
GACACTCATCTCAAGGGAAA+AGG + chr1_1:51082498-51082517 None:intergenic 45.0%
! GAGTGTCAGATTTGGAGTGT+TGG - chr1_1:51082511-51082530 Msa0026940:five_prime_UTR 45.0%
!! TGTCAGATTTGGAGTGTTGG+CGG - chr1_1:51082514-51082533 Msa0026940:five_prime_UTR 45.0%
!!! AAATTTTATTCAAATTTTAA+AGG + chr1_1:51072938-51072957 None:intergenic 5.0%
AGAGAGAGATGGAGTGTGTG+GGG + chr1_1:51066844-51066863 None:intergenic 50.0%
GAGAGAGAGATGGAGTGTGT+GGG + chr1_1:51066845-51066864 None:intergenic 50.0%
AGAGAGAGAGATGGAGTGTG+TGG + chr1_1:51066846-51066865 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+TGG + chr1_1:51066855-51066874 None:intergenic 50.0%
! GGGAGTGTAGAGAGAGAAAG+AGG + chr1_1:51066897-51066916 None:intergenic 50.0%
AAGGGATTGGATCTGGTGTG+TGG + chr1_1:51067053-51067072 None:intergenic 50.0%
CAGTGCTTCCTCCATTGTGA+AGG + chr1_1:51067072-51067091 None:intergenic 50.0%
! CTTCACAATGGAGGAAGCAC+TGG - chr1_1:51067070-51067089 Msa0026940:CDS 50.0%
ATGATCGCCGGAGAGAACAA+CGG + chr1_1:51067282-51067301 None:intergenic 50.0%
TTGTTCCGGCGGTTGTTGAT+CGG - chr1_1:51067324-51067343 Msa0026940:intron 50.0%
ACTCTTGCTCACTCTCATGG+AGG - chr1_1:51067388-51067407 Msa0026940:intron 50.0%
CTGCATGACAAAGCCCAGAA+AGG + chr1_1:51068096-51068115 None:intergenic 50.0%
! TGGGCTTTGTCATGCAGCTA+TGG - chr1_1:51068099-51068118 Msa0026940:intron 50.0%
CTAACCATGTAACAGCCAGC+AGG + chr1_1:51068304-51068323 None:intergenic 50.0%
! CAGTGGTGGGGATAGGAATT+AGG - chr1_1:51068485-51068504 Msa0026940:CDS 50.0%
ACAAAAACAGGCCCAAGAGG+AGG + chr1_1:51069103-51069122 None:intergenic 50.0%
GCAACAAAAACAGGCCCAAG+AGG + chr1_1:51069106-51069125 None:intergenic 50.0%
! AAAGAGCGGGGTCTTTTGCT+TGG - chr1_1:51069245-51069264 Msa0026940:intron 50.0%
CGAACCGTGACATCTGCAAT+CGG - chr1_1:51069304-51069323 Msa0026940:intron 50.0%
GGAAGAATAGCCCGTTGAAG+GGG + chr1_1:51069352-51069371 None:intergenic 50.0%
GAGGAAGAATAGCCCGTTGA+AGG + chr1_1:51069354-51069373 None:intergenic 50.0%
CACTGCACCACAATGGTTTC+AGG - chr1_1:51070108-51070127 Msa0026940:CDS 50.0%
GAAGGTGATGTCACCGAGAA+AGG - chr1_1:51071350-51071369 Msa0026940:CDS 50.0%
CCCTTGTACCAGAAAAGGAC+TGG - chr1_1:51071438-51071457 Msa0026940:CDS 50.0%
!! CGTACTGACCAGTCCTTTTC+TGG + chr1_1:51071449-51071468 None:intergenic 50.0%
CAAGACGTTCGATTCTCTGC+AGG + chr1_1:51071481-51071500 None:intergenic 50.0%
AACGAGAGAGAGAGAGAGAG+GGG + chr1_1:51071586-51071605 None:intergenic 50.0%
GAACGAGAGAGAGAGAGAGA+GGG + chr1_1:51071587-51071606 None:intergenic 50.0%
TGAACGAGAGAGAGAGAGAG+AGG + chr1_1:51071588-51071607 None:intergenic 50.0%
TCTCTCTCTCTCTCTCGTTC+AGG - chr1_1:51071587-51071606 Msa0026940:intron 50.0%
GCAATTTAGACGACTAGGGG+CGG + chr1_1:51071831-51071850 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr1_1:51071952-51071971 None:intergenic 50.0%
CTCAAACACCCACAGACCTA+TGG + chr1_1:51072033-51072052 None:intergenic 50.0%
CATAGGTCTGTGGGTGTTTG+AGG - chr1_1:51072031-51072050 Msa0026940:CDS 50.0%
TAGGTCTGTGGGTGTTTGAG+GGG - chr1_1:51072033-51072052 Msa0026940:CDS 50.0%
GCTCAAAGGAGGATTGAGCA+AGG + chr1_1:51072566-51072585 None:intergenic 50.0%
! CTAGGCCTAAGCTTGCTCAA+AGG + chr1_1:51072580-51072599 None:intergenic 50.0%
ACGAAGGAATGACTCGAGGA+TGG - chr1_1:51073118-51073137 Msa0026940:intron 50.0%
CAGTGGTTGCTGCACTTGAA+GGG + chr1_1:51073337-51073356 None:intergenic 50.0%
!! TGACTTGGTTTGCGTGCACA+AGG + chr1_1:51073407-51073426 None:intergenic 50.0%
! CATGGTAGCTTGTCTTCACG+TGG - chr1_1:51073734-51073753 Msa0026940:intron 50.0%
AAGTTGCTCGTGTGCTTCCT+CGG - chr1_1:51075551-51075570 Msa0026940:intron 50.0%
GCAGTGCAATACTTCGTGCA+AGG - chr1_1:51075599-51075618 Msa0026940:intron 50.0%
GTGTTGTGTTTCGGACGCAA+TGG - chr1_1:51075782-51075801 Msa0026940:intron 50.0%
TTCACGACACAACTCCCTCT+TGG + chr1_1:51076263-51076282 None:intergenic 50.0%
GGTTGTTGACATACTCCCTC+CGG - chr1_1:51076852-51076871 Msa0026940:intron 50.0%
! TGAGAGCATGCTTAGAGGCT+TGG - chr1_1:51077541-51077560 Msa0026940:intron 50.0%
AATGGGGGATCACGAGATGA+GGG + chr1_1:51077776-51077795 None:intergenic 50.0%
TGAAACAGCAGCAGGGAATG+GGG + chr1_1:51077792-51077811 None:intergenic 50.0%
CTGAAACAGCAGCAGGGAAT+GGG + chr1_1:51077793-51077812 None:intergenic 50.0%
TAGAGGCTGAAACAGCAGCA+GGG + chr1_1:51077799-51077818 None:intergenic 50.0%
TTAGAGGCTGAAACAGCAGC+AGG + chr1_1:51077800-51077819 None:intergenic 50.0%
AGGGGTGGTCAGATGATTAG+AGG + chr1_1:51077816-51077835 None:intergenic 50.0%
GCGTCAATAGAGGCAGTATC+CGG - chr1_1:51077861-51077880 Msa0026940:CDS 50.0%
AGTATCCGGAACGGTGGTAT+GGG - chr1_1:51077875-51077894 Msa0026940:CDS 50.0%
ACAAACCCATACCACCGTTC+CGG + chr1_1:51077883-51077902 None:intergenic 50.0%
ACAGTTACATCCGGGAGACT+AGG - chr1_1:51078053-51078072 Msa0026940:intron 50.0%
TCATATACCGCCTAGTCTCC+CGG + chr1_1:51078066-51078085 None:intergenic 50.0%
GCGGTATATGAACCCCAATG+TGG - chr1_1:51078075-51078094 Msa0026940:intron 50.0%
GCGTGTCTTCTGGTAGAAGA+AGG - chr1_1:51078206-51078225 Msa0026940:intron 50.0%
AGGGCTTCATGAAGAGATGC+TGG + chr1_1:51078286-51078305 None:intergenic 50.0%
CTTCATGAAGCCCTGAGTGA+AGG - chr1_1:51078292-51078311 Msa0026940:intron 50.0%
GCAAGCATGCTCTACGACTT+TGG - chr1_1:51078600-51078619 Msa0026940:intron 50.0%
AGCATGCTCTACGACTTTGG+AGG - chr1_1:51078603-51078622 Msa0026940:intron 50.0%
! TCTACGACTTTGGAGGCTGT+GGG - chr1_1:51078610-51078629 Msa0026940:intron 50.0%
!! CCGGAAGGTGCTGCAAATAT+TGG - chr1_1:51078760-51078779 Msa0026940:intron 50.0%
!! CTCTAGATAGTGATGGTGGC+AGG - chr1_1:51079133-51079152 Msa0026940:CDS 50.0%
CAGTTTCATCCGAAGCTGGT+TGG + chr1_1:51079203-51079222 None:intergenic 50.0%
ACCAGCTTCGGATGAAACTG+AGG - chr1_1:51079203-51079222 Msa0026940:CDS 50.0%
TCCTCAGTTTCATCCGAAGC+TGG + chr1_1:51079207-51079226 None:intergenic 50.0%
TCAGTCAGCTGAAGACGTGA+AGG - chr1_1:51079476-51079495 Msa0026940:intron 50.0%
TTCAACCTCGTCAGCAGAGA+TGG - chr1_1:51079720-51079739 Msa0026940:intron 50.0%
TAGATATGCAGTGGGGGTGA+TGG - chr1_1:51079846-51079865 Msa0026940:CDS 50.0%
! TATCCCTCTACTGGTTACCG+AGG - chr1_1:51080852-51080871 Msa0026940:intron 50.0%
TTTCCCTTCAGATTGTGGGG+CGG - chr1_1:51081595-51081614 Msa0026940:intron 50.0%
CCTTACGAATATCCGCACTC+TGG + chr1_1:51081689-51081708 None:intergenic 50.0%
CCAGAGTGCGGATATTCGTA+AGG - chr1_1:51081686-51081705 Msa0026940:intron 50.0%
ACACACCCCTAATCTCCAGT+TGG + chr1_1:51081843-51081862 None:intergenic 50.0%
! CTGGAGATTAGGGGTGTGTA+TGG - chr1_1:51081844-51081863 Msa0026940:intron 50.0%
GCAACCATGGTTTGAGAGCA+TGG - chr1_1:51081871-51081890 Msa0026940:intron 50.0%
CGAATCTCACATGCAAGGAC+AGG - chr1_1:51082301-51082320 Msa0026940:five_prime_UTR 50.0%
AGTGGGGAAGATGAAGGACG+CGG + chr1_1:51066803-51066822 None:intergenic 55.0%
TGTGGGAGTGGGGAAGATGA+AGG + chr1_1:51066809-51066828 None:intergenic 55.0%
GGTGTGTGGTGGTTCAGATC+TGG + chr1_1:51067039-51067058 None:intergenic 55.0%
GGATTGGATCTGGTGTGTGG+TGG + chr1_1:51067050-51067069 None:intergenic 55.0%
GAAGGACGCAAAGGAACGCA+TGG - chr1_1:51067106-51067125 Msa0026940:CDS 55.0%
ACGCAAAGGAACGCATGGCA+GGG - chr1_1:51067111-51067130 Msa0026940:CDS 55.0%
TTTCAACGCGCTTGTTCCGG+CGG - chr1_1:51067313-51067332 Msa0026940:intron 55.0%
GTTGTTGATCGGTTGGGGGA+TGG - chr1_1:51067335-51067354 Msa0026940:intron 55.0%
! CAAGCCTGCTGGCTGTTACA+TGG - chr1_1:51068297-51068316 Msa0026940:intron 55.0%
ATATGTCTGTGGGGCAGTGG+TGG - chr1_1:51068471-51068490 Msa0026940:CDS 55.0%
TATGTCTGTGGGGCAGTGGT+GGG - chr1_1:51068472-51068491 Msa0026940:CDS 55.0%
! CAGCGGGCTTGAGAGTGATT+TGG + chr1_1:51068566-51068585 None:intergenic 55.0%
TCGTCATCCATGCCTCCTCT+TGG - chr1_1:51069088-51069107 Msa0026940:intron 55.0%
CGTCATCCATGCCTCCTCTT+GGG - chr1_1:51069089-51069108 Msa0026940:intron 55.0%
GCGATCCCAATCCTTCTGTC+CGG - chr1_1:51069489-51069508 Msa0026940:CDS 55.0%
CGATCCCAATCCTTCTGTCC+GGG - chr1_1:51069490-51069509 Msa0026940:CDS 55.0%
GCTTCCCGGACAGAAGGATT+GGG + chr1_1:51069497-51069516 None:intergenic 55.0%
TGCTTCCCGGACAGAAGGAT+TGG + chr1_1:51069498-51069517 None:intergenic 55.0%
ATAGCTGCTTCCCGGACAGA+AGG + chr1_1:51069503-51069522 None:intergenic 55.0%
CCAAAGAAGAAGGGAGGTCG+TGG + chr1_1:51069943-51069962 None:intergenic 55.0%
CCACGACCTCCCTTCTTCTT+TGG - chr1_1:51069940-51069959 Msa0026940:CDS 55.0%
ACGAGAGAGAGAGAGAGAGG+GGG + chr1_1:51071585-51071604 None:intergenic 55.0%
!! CTAGGGGCGGACTGCAATTA+AGG + chr1_1:51071818-51071837 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG + chr1_1:51071867-51071886 None:intergenic 55.0%
!! GTGTTGGCTTTGAGGGGGAT+AGG - chr1_1:51071893-51071912 Msa0026940:CDS 55.0%
GCACTCCTCACCTTACAAGC+CGG - chr1_1:51071944-51071963 Msa0026940:CDS 55.0%
! GGCCTAAGCTTGCTCAAAGG+AGG + chr1_1:51072577-51072596 None:intergenic 55.0%
! ACTCACAAGGGTGTGGGAAC+TGG + chr1_1:51072998-51073017 None:intergenic 55.0%
GCAGTGGTTGCTGCACTTGA+AGG + chr1_1:51073338-51073357 None:intergenic 55.0%
GATAGGTGCGGTCAACTGCA+AGG - chr1_1:51077081-51077100 Msa0026940:intron 55.0%
TCGGGGACTTCTATCTCCTC+TGG - chr1_1:51077425-51077444 Msa0026940:CDS 55.0%
AGGGTCAACTCCTGCACTAG+GGG + chr1_1:51077753-51077772 None:intergenic 55.0%
GAGGGTCAACTCCTGCACTA+GGG + chr1_1:51077754-51077773 None:intergenic 55.0%
GAATGGGGGATCACGAGATG+AGG + chr1_1:51077777-51077796 None:intergenic 55.0%
GAAACAGCAGCAGGGAATGG+GGG + chr1_1:51077791-51077810 None:intergenic 55.0%
GCTGAAACAGCAGCAGGGAA+TGG + chr1_1:51077794-51077813 None:intergenic 55.0%
CCTCTATTGACGCCCAAACC+AGG + chr1_1:51077854-51077873 None:intergenic 55.0%
!! CCTGGTTTGGGCGTCAATAG+AGG - chr1_1:51077851-51077870 Msa0026940:intron 55.0%
CAGTATCCGGAACGGTGGTA+TGG - chr1_1:51077874-51077893 Msa0026940:CDS 55.0%
GTTACATCCGGGAGACTAGG+CGG - chr1_1:51078056-51078075 Msa0026940:intron 55.0%
!! AGGTTCTGACTGGTCTGCCA+GGG - chr1_1:51078324-51078343 Msa0026940:intron 55.0%
! CTCTACGACTTTGGAGGCTG+TGG - chr1_1:51078609-51078628 Msa0026940:intron 55.0%
ACGTAGCAATGCGGGCAAGA+GGG + chr1_1:51078656-51078675 None:intergenic 55.0%
AACGTAGCAATGCGGGCAAG+AGG + chr1_1:51078657-51078676 None:intergenic 55.0%
!! GGCCACGACTGGCTTTAATC+AGG + chr1_1:51079182-51079201 None:intergenic 55.0%
GGCTTTCAAGCTGACCGACT+TGG - chr1_1:51079327-51079346 Msa0026940:intron 55.0%
!! AGCTGACCGACTTGGATACG+TGG - chr1_1:51079335-51079354 Msa0026940:intron 55.0%
CAAAGCCATCTCTGCTGACG+AGG + chr1_1:51079728-51079747 None:intergenic 55.0%
CGTCCTCGGTAACCAGTAGA+GGG + chr1_1:51080858-51080877 None:intergenic 55.0%
TCGTCCTCGGTAACCAGTAG+AGG + chr1_1:51080859-51080878 None:intergenic 55.0%
GCTCTCTCAGGAGGAACTGA+TGG - chr1_1:51081617-51081636 Msa0026940:intron 55.0%
GAGCACACCCTAAATGCCTG+TGG - chr1_1:51081918-51081937 Msa0026940:intron 55.0%
!! CAGATTTGGAGTGTTGGCGG+TGG - chr1_1:51082517-51082536 Msa0026940:five_prime_UTR 55.0%
!! GGAGTGTTGGCGGTGGAATA+CGG - chr1_1:51082524-51082543 Msa0026940:five_prime_UTR 55.0%
GAAGATGAAGGACGCGGAGG+AGG + chr1_1:51066797-51066816 None:intergenic 60.0%
ACTGGAACTAGCACGCGCGA+AGG - chr1_1:51067088-51067107 Msa0026940:CDS 60.0%
GACGCAAAGGAACGCATGGC+AGG - chr1_1:51067110-51067129 Msa0026940:CDS 60.0%
CGCAAAGGAACGCATGGCAG+GGG - chr1_1:51067112-51067131 Msa0026940:CDS 60.0%
GCAGGGTGCGCTTCAAGCTT+TGG - chr1_1:51067250-51067269 Msa0026940:intron 60.0%
GCTTCCGCCGTTGTTCTCTC+CGG - chr1_1:51067272-51067291 Msa0026940:intron 60.0%
ATCGCCGGAGAGAACAACGG+CGG + chr1_1:51067279-51067298 None:intergenic 60.0%
TCCGGCGGTTGTTGATCGGT+TGG - chr1_1:51067328-51067347 Msa0026940:intron 60.0%
CCCAACCGATCAACAACCGC+CGG + chr1_1:51067332-51067351 None:intergenic 60.0%
CCGGCGGTTGTTGATCGGTT+GGG - chr1_1:51067329-51067348 Msa0026940:intron 60.0%
CGGCGGTTGTTGATCGGTTG+GGG - chr1_1:51067330-51067349 Msa0026940:intron 60.0%
GGCGGTTGTTGATCGGTTGG+GGG - chr1_1:51067331-51067350 Msa0026940:intron 60.0%
ATGTCTGTGGGGCAGTGGTG+GGG - chr1_1:51068473-51068492 Msa0026940:CDS 60.0%
AACAGGCCCAAGAGGAGGCA+TGG + chr1_1:51069098-51069117 None:intergenic 60.0%
CGAGAGAGAGAGAGAGAGGG+GGG + chr1_1:51071584-51071603 None:intergenic 60.0%
!! GGGGCGGACTGCAATTAAGG+CGG + chr1_1:51071815-51071834 None:intergenic 60.0%
TGTTTCGGACGCAATGGGCG+AGG - chr1_1:51075788-51075807 Msa0026940:intron 60.0%
CTACGTCACCCGACTCCGTA+AGG + chr1_1:51076313-51076332 None:intergenic 60.0%
AATAGGCGACGGGAACGCTC+CGG + chr1_1:51077137-51077156 None:intergenic 60.0%
GGAGGGTCAACTCCTGCACT+AGG + chr1_1:51077755-51077774 None:intergenic 60.0%
GGGGATCACGAGATGAGGGA+GGG + chr1_1:51077772-51077791 None:intergenic 60.0%
AGAGGCAGTATCCGGAACGG+TGG - chr1_1:51077869-51077888 Msa0026940:CDS 60.0%
GTAGCTGCACGCGTGTCTTC+TGG - chr1_1:51078196-51078215 Msa0026940:intron 60.0%
!! CAGGTTCTGACTGGTCTGCC+AGG - chr1_1:51078323-51078342 Msa0026940:intron 60.0%
! GCGAGGGGTGCGCTGTTTAA+GGG + chr1_1:51078959-51078978 None:intergenic 60.0%
! TGCGAGGGGTGCGCTGTTTA+AGG + chr1_1:51078960-51078979 None:intergenic 60.0%
CAGTCGTGGCCAACCAGCTT+CGG - chr1_1:51079191-51079210 Msa0026940:CDS 60.0%
GAGCCGCCCCACAATCTGAA+GGG + chr1_1:51081601-51081620 None:intergenic 60.0%
AGAGCCGCCCCACAATCTGA+AGG + chr1_1:51081602-51081621 None:intergenic 60.0%
GGGGAAGATGAAGGACGCGG+AGG + chr1_1:51066800-51066819 None:intergenic 65.0%
AGCACGCGCGAAGGACGCAA+AGG - chr1_1:51067097-51067116 Msa0026940:CDS 65.0%
! TGTGGGGCAGTGGTGGGGAT+AGG - chr1_1:51068478-51068497 Msa0026940:CDS 65.0%
GGGGGATCACGAGATGAGGG+AGG + chr1_1:51077773-51077792 None:intergenic 65.0%
! CGAAGCTGGTTGGCCACGAC+TGG + chr1_1:51079193-51079212 None:intergenic 65.0%
GATTGTGGGGCGGCTCTCTC+AGG - chr1_1:51081605-51081624 Msa0026940:intron 65.0%
TGTGGGGCGGCTCTCTCAGG+AGG - chr1_1:51081608-51081627 Msa0026940:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 51066699 51082662 51066699 ID=Msa0026940;Name=Msa0026940
chr1_1 mRNA 51066699 51082662 51066699 ID=Msa0026940-mRNA-1;Parent=Msa0026940;Name=Msa0026940-mRNA-1;_AED=0.09;_eAED=0.09;_QI=378|0.85|0.90|0.95|1|1|22|311|1462
chr1_1 exon 51066699 51067171 51066699 ID=Msa0026940-mRNA-1:exon:14884;Parent=Msa0026940-mRNA-1
chr1_1 exon 51067654 51067734 51067654 ID=Msa0026940-mRNA-1:exon:14883;Parent=Msa0026940-mRNA-1
chr1_1 exon 51068446 51068514 51068446 ID=Msa0026940-mRNA-1:exon:14882;Parent=Msa0026940-mRNA-1
chr1_1 exon 51068624 51068692 51068624 ID=Msa0026940-mRNA-1:exon:14881;Parent=Msa0026940-mRNA-1
chr1_1 exon 51068778 51068852 51068778 ID=Msa0026940-mRNA-1:exon:14880;Parent=Msa0026940-mRNA-1
chr1_1 exon 51068992 51069096 51068992 ID=Msa0026940-mRNA-1:exon:14879;Parent=Msa0026940-mRNA-1
chr1_1 exon 51069411 51069512 51069411 ID=Msa0026940-mRNA-1:exon:14878;Parent=Msa0026940-mRNA-1
chr1_1 exon 51069813 51071599 51069813 ID=Msa0026940-mRNA-1:exon:14877;Parent=Msa0026940-mRNA-1
chr1_1 exon 51071744 51072098 51071744 ID=Msa0026940-mRNA-1:exon:14876;Parent=Msa0026940-mRNA-1
chr1_1 exon 51072177 51072275 51072177 ID=Msa0026940-mRNA-1:exon:14875;Parent=Msa0026940-mRNA-1
chr1_1 exon 51073552 51073669 51073552 ID=Msa0026940-mRNA-1:exon:14874;Parent=Msa0026940-mRNA-1
chr1_1 exon 51073741 51073826 51073741 ID=Msa0026940-mRNA-1:exon:14873;Parent=Msa0026940-mRNA-1
chr1_1 exon 51073910 51073978 51073910 ID=Msa0026940-mRNA-1:exon:14872;Parent=Msa0026940-mRNA-1
chr1_1 exon 51074057 51074131 51074057 ID=Msa0026940-mRNA-1:exon:14871;Parent=Msa0026940-mRNA-1
chr1_1 exon 51076936 51077033 51076936 ID=Msa0026940-mRNA-1:exon:14870;Parent=Msa0026940-mRNA-1
chr1_1 exon 51077396 51077485 51077396 ID=Msa0026940-mRNA-1:exon:14869;Parent=Msa0026940-mRNA-1
chr1_1 exon 51077852 51078013 51077852 ID=Msa0026940-mRNA-1:exon:14868;Parent=Msa0026940-mRNA-1
chr1_1 exon 51079066 51079231 51079066 ID=Msa0026940-mRNA-1:exon:14867;Parent=Msa0026940-mRNA-1
chr1_1 exon 51079400 51079468 51079400 ID=Msa0026940-mRNA-1:exon:14866;Parent=Msa0026940-mRNA-1
chr1_1 exon 51079826 51079888 51079826 ID=Msa0026940-mRNA-1:exon:14865;Parent=Msa0026940-mRNA-1
chr1_1 exon 51079986 51080141 51079986 ID=Msa0026940-mRNA-1:exon:14864;Parent=Msa0026940-mRNA-1
chr1_1 exon 51081952 51082662 51081952 ID=Msa0026940-mRNA-1:exon:14863;Parent=Msa0026940-mRNA-1
chr1_1 five_prime_UTR 51082285 51082662 51082285 ID=Msa0026940-mRNA-1:five_prime_utr;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51081952 51082284 51081952 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51079986 51080141 51079986 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51079826 51079888 51079826 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51079400 51079468 51079400 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51079066 51079231 51079066 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51077852 51078013 51077852 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51077396 51077485 51077396 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51076936 51077033 51076936 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51074057 51074131 51074057 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51073910 51073978 51073910 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51073741 51073826 51073741 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51073552 51073669 51073552 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51072177 51072275 51072177 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51071744 51072098 51071744 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51069813 51071599 51069813 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51069411 51069512 51069411 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51068992 51069096 51068992 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51068778 51068852 51068778 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51068624 51068692 51068624 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51068446 51068514 51068446 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51067654 51067734 51067654 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 CDS 51067010 51067171 51067010 ID=Msa0026940-mRNA-1:cds;Parent=Msa0026940-mRNA-1
chr1_1 three_prime_UTR 51066699 51067009 51066699 ID=Msa0026940-mRNA-1:three_prime_utr;Parent=Msa0026940-mRNA-1
Gene Sequence

>Msa0026940

ATGGAGGAAGCACTGGAACTAGCACGCGCGAAGGACGCAAAGGAACGCATGGCAGGGGTAGAGCGTCTCCACCAAGTTCTAGAAGCTTCTAGAAAAACTCTAAGTTCAACCGAAGTTTCATCACTCGTCGATTGTTGCTTGGATCTCTTGAAGGATAGTAGTTTTCGCGTTTCGCAGGGTGCGCTTCAAGCTTTGGCTTCCGCCGTTGTTCTCTCCGGCGATCATTTTAAGCTTCATTTCAACGCGCTTGTTCCGGCGGTTGTTGATCGGTTGGGGGATGGTAAACAGCCTGTTAGAGATGCTGCTAGAAGACTCTTGCTCACTCTCATGGAGGTTTCGTCTCCTACAATAATTGTTGAAAGAGCGGGGTCTTTTGCTTGGACATGCAAAAACTGGAGAGTCAGAGAAGAGTTTGCACGAACCGTGACATCTGCAATCGGTCTATTTTCATCTACTGAACTACCCCTTCAACGGGCTATTCTTCCTCCTACTTTGCAATTGCTGAGCGATCCCAATCCTTCTGTCCGGGAAGCAGCTATTTTGTGCATTGAGGAAATGTATGCACAAGCTGGGTCTCAATTTCGTGATGAACTTCAGCGCCACGACCTCCCTTCTTCTTTGGTGAAATATATTAATGCTAGGCTAGAGGGGATTCAACCAAAAGCTCAGTCTTCAAATGGTATCTCTAGTGGTTATATCACTGGAGAAATGAATCCTTTGAATGCTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAAGGAGACATCTCTTTTTGGAGGAGAAGGTGATGTCACCGAGAAAGGCATTGAACCTATCAAGGTGTATTCGGAGAAGGAATTCATCAGGGAAATCGAGAAGATTGTATCTACCCTTGTACCAGAAAAGGACTGGTCAGTACGAATTACTGCCCTGCAGAGAATCGAACGTCTTGTTTTGGGAGCCTCCAACACCTTCATTGTGTTGGCTTTGAGGGGGATAGGACTCTTGAGAAGAGTTTATAAAGAGGAGGCACTCCTCACCTTACAAGCCGGAGCTGCTGATTATCCGTGTTTTTTTGGAGTCCTAAAACAGCTTGTTGGACCATTAAGCACACAACTATCTGATCGAAGGTCTACCATTGTGAAACAGGCATGCCATCTGTTATGTTTTTTGTCGAAAGACCTCTTGGGTGATTTTGAAGCATGTGCTGAAATGTTCATACCAGTTCTTTTGAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGCTACGCAATTGCAAAGTTGCTCGTGTGCTTCCTCGGATAGTTGATTGTGCAAAAAGTGACCGCAGTGCAATACTTCGTGCAAGGTGCTGTGATTATGCTCTTTTGATACTAGAACATTGGCCTGATGCACCAGAAATACAACGATCAGCTGACTTATACGAGGATATGATAAGGTGTTGTGTTTCGGACGCAATGGGCGAGGTGCGGTCAACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCGGAGCGTTCCCGTCGCCTATTTTCATCCTTTGACCCTTCTATTCAGAGGTTAATAAATGAAGAAGATGGAGGCAAACATAGGCGACATGCATCGCCTTCCATTCGTGATAGAAGTGCACCAATGTCATCTTCCAGTCAAGCTTCAACTCCTAATCTATCTGGTTATGGAACTTCAGCTATTGTTGCAATGGACAGAAATTCTAGTTTATCATCGGGGACTTCTATCTCCTCTGGTGTTCTTCTTTCACAAGCTAAGTCACTTGGTAATGGTACAGAACGTAGTTTAGAAAGTGTACTGCATGCAAGCAAACAGAAGGTCAGTGCTATTGAGAGCATGCTTAGAGGCTTGGATTTGTCAAATAAGCATAATTCATCTGCTCTGCGATCTTCAAGTTTGGATCTAGGAGTTGACCCTCCCTCATCTCGTGATCCCCCATTCCCTGCTGCTGTTTCAGCCTCTAATCATCTGACCACCCCTTTAACAACAGAGTCACCTGGTTTGGGCGTCAATAGAGGCAGTATCCGGAACGGTGGTATGGGTTTGTCTGATATAATCACCCAAATTCAAGCTTCCAAAGATTCTGGCAAGTTATCGTATAATAGCAATGTTGGTATCGAGCCTTCATCAGATTTTTCATCATACACAAGTAAAAGGACTATTGAAAAATTACAAGGAAGAAGTTCTGTTGATGAAAACAGTTACATCCGGGAGACTAGGCGGTATATGAACCCCAATGTGGATAGGCAGTATATGGATGCTCTTTATAAAGATGGAAACTTTAGGGATTCACAGAATAGTTGTGTGCCTAATTTTCAGAGGCCACTATTAAGAAAGAACGTAGCTGCACGCGTGTCTTCTGGTAGAAGAAGGAGTGTCGATGATAGTCACTTATCTGTTGGAGAGATGTCAAATTATGCAGATGGACCAGCATCTCTTCATGAAGCCCTGAGTGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCCAGGGTTTCTGCCTTCAATTACCTTCACTCGTTATTGGAGCAAGGTCAAAAGGGAATTCAAGAAGTAGTCCAGAATTTTGAGAAGGTAATGAAGTTATTTTTTCAACACTTGGATGATCCCCATCATAAAATCGCACATGCGGCTCTCTCCACACTTGCAGATATTATTCGTACATGCCGAAAGCCATTTGAAGGTTACATGGAACGAATGTTACCTCATGTGTTTTCTCGTTTAATTGACCCCAAAGAGCTTGTTAGGCAAGCATGCTCTACGACTTTGGAGGCTGTGGGCAAAACATACAGTATAGATTCCCTCTTGCCCGCATTGCTACGTTCTCTTGACGAACAAAGGTCTCCAAAGGCTAAATTGGCTGTTATTGAGTTTGCAATCAGTTCCTTTAACAAGCATGCAATGAATCCGGAAGGTGCTGCAAATATTGGCATCCTAAAATTATGGCTTGCCAAGTTAGCCCCATTAGTTCACGATAAAAATACAAAGCTTAAAGAAGCAGCTATTACGTGCATTATATCAGTATACTCTCACTTCGATTCATCTGCAGTTTTGAATTTTATTCTTAGTTTGTCAGTTGATGAACAAAATTCTTTGAGACGAGCCCTTAAACAGCGCACCCCTCGCATTGAAGTAGACTTAATGAACTATCTGCAAAACAAGAAAGAGCGGCGTACCAAGTCTTCCTATGATCCATCTGATAATGTAGGAACATCCTCTGAAGAGGGATATGTTGGTTTGTCTAGAAAAGCACATTACATTGGGAGATATTCTGGTGGTTCTCTAGATAGTGATGGTGGCAGGAAATGGAGTTCCCAAGATTCGAACCTGATTAAAGCCAGTCGTGGCCAACCAGCTTCGGATGAAACTGAGGATCATCTGTATCAAAATCTTCAGACTAATTGTGATAGTGATATTGTTGGTTCAAAAGCCAAAGATCTTGCTTACACTGTCGATTCAATGGATCAAAACTTTGGCTTTCAAGCTGACCGACTTGGATACGTGGATAGTAGCATGAACTTTGAAGGTTTGCCATCTGATGTGGATGTTAATGGTCTGATGTCATTAGAACATTTAAATATTGCCGAAGGCTTTGAACATCTTTCTGAATTGAACAATAATTATCAGTCAGCTGAAGACGTGAAGGTCAACCACATGACAAACACAGGACTCAGTATTCCTCAAATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCACTATTTCAAGTAAGCGGACTGCACTTCTACAGTTAGTTGAAGCTTCTGAAGCAAATGATCATTCTGTTTGGATCCAGTACTTCAATCAGATATTGACCGTTGTGCTTGAGGTGCTAGATGATTCAGATTCCTCAATCAGAGAGCTTGCTCTTTCATTGATAGTTGAAATGCTTAAAAACCAGAAAGATGCCATGGAAAATTCAGTTGAGATTGTAATTGAAAAGCTGCTTAATGTTACAAAGGATACTGTTCCCAAGGTCTCAAACGAAGCGGAGCACTGCCTGACAATTGTTTTATCTCAGAATGATCCATTCAGATGTTTAAGTGTCATTATCCCTCTACTGGTTACCGAGGACGAGAAAACTCTAGTCACTTGCATAAATTGCTTGACTAAGGAGGAACTGATGGCTCAGTTACCCTCATTTCTCCCTGCATTGTTTGAAGCTTTTGGAAACCAGAGTGCGGATATTCGTAAGACTGTTGTTTTCTGTCTAGTGGATATTTATATCATGCTTGGGAAAGCATTCTTGCCATATTTGGAAGGACTAAGCAGCACACAGTTGAAGTTGGTTACCATTTATGCAAATCGAATCTCACATGCAAGGACAGGAAAATCAATTGATGCTGCTATCGATTAG
Protein sequence

>Msa0026940

MEEALELARAKDAKERMAGVERLHQVLEASRKTLSSTEVSSLVDCCLDLLKDSSFRVSQGALQALASAVVLSGDHFKLHFNALVPAVVDRLGDGKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTCKNWRVREEFARTVTSAIGLFSSTELPLQRAILPPTLQLLSDPNPSVREAAILCIEEMYAQAGSQFRDELQRHDLPSSLVKYINARLEGIQPKAQSSNGISSGYITGEMNPLNANPKKSSPKAKSSSKETSLFGGEGDVTEKGIEPIKVYSEKEFIREIEKIVSTLVPEKDWSVRITALQRIERLVLGASNTFIVLALRGIGLLRRVYKEEALLTLQAGAADYPCFFGVLKQLVGPLSTQLSDRRSTIVKQACHLLCFLSKDLLGDFEACAEMFIPVLLKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIVDCAKSDRSAILRARCCDYALLILEHWPDAPEIQRSADLYEDMIRCCVSDAMGEVRSTARMCYRMFAKTWPERSRRLFSSFDPSIQRLINEEDGGKHRRHASPSIRDRSAPMSSSSQASTPNLSGYGTSAIVAMDRNSSLSSGTSISSGVLLSQAKSLGNGTERSLESVLHASKQKVSAIESMLRGLDLSNKHNSSALRSSSLDLGVDPPSSRDPPFPAAVSASNHLTTPLTTESPGLGVNRGSIRNGGMGLSDIITQIQASKDSGKLSYNSNVGIEPSSDFSSYTSKRTIEKLQGRSSVDENSYIRETRRYMNPNVDRQYMDALYKDGNFRDSQNSCVPNFQRPLLRKNVAARVSSGRRRSVDDSHLSVGEMSNYADGPASLHEALSEGLSSGSDWSARVSAFNYLHSLLEQGQKGIQEVVQNFEKVMKLFFQHLDDPHHKIAHAALSTLADIIRTCRKPFEGYMERMLPHVFSRLIDPKELVRQACSTTLEAVGKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNPEGAANIGILKLWLAKLAPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDEQNSLRRALKQRTPRIEVDLMNYLQNKKERRTKSSYDPSDNVGTSSEEGYVGLSRKAHYIGRYSGGSLDSDGGRKWSSQDSNLIKASRGQPASDETEDHLYQNLQTNCDSDIVGSKAKDLAYTVDSMDQNFGFQADRLGYVDSSMNFEGLPSDVDVNGLMSLEHLNIAEGFEHLSELNNNYQSAEDVKVNHMTNTGLSIPQILHMICSGGDGSTISSKRTALLQLVEASEANDHSVWIQYFNQILTVVLEVLDDSDSSIRELALSLIVEMLKNQKDAMENSVEIVIEKLLNVTKDTVPKVSNEAEHCLTIVLSQNDPFRCLSVIIPLLVTEDEKTLVTCINCLTKEELMAQLPSFLPALFEAFGNQSADIRKTVVFCLVDIYIMLGKAFLPYLEGLSSTQLKLVTIYANRISHARTGKSIDAAID*