Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079060 | AAS84487.1 | 100.000 | 541 | 0 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1101 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079060 | sp|Q56XP4|NHX2_ARATH | 77.281 | 537 | 118 | 2 | 7 | 539 | 6 | 542 | 0.0 | 847 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079060 | Q699Y5 | 100.000 | 541 | 0 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1101 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0079060 | Msa0127640 | 0.966095 | 1.822885e-125 | -8.615850e-47 |
| Msa0079060 | Msa1305820 | 0.820574 | 6.383378e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079060 | MtrunA17_Chr1g0191231 | 99.445 | 541 | 3 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1093 |
| Msa0079060 | MtrunA17_Chr7g0273581 | 73.657 | 577 | 107 | 4 | 9 | 540 | 3 | 579 | 0.0 | 847 |
| Msa0079060 | MtrunA17_Chr4g0066681 | 74.669 | 529 | 128 | 2 | 7 | 532 | 6 | 531 | 0.0 | 801 |
| Msa0079060 | MtrunA17_Chr1g0191531 | 63.048 | 525 | 161 | 4 | 23 | 532 | 23 | 529 | 0.0 | 660 |
| Msa0079060 | MtrunA17_Chr3g0100591 | 61.858 | 506 | 185 | 4 | 19 | 521 | 24 | 524 | 0.0 | 623 |
| Msa0079060 | MtrunA17_Chr1g0191541 | 53.435 | 524 | 173 | 6 | 13 | 532 | 13 | 469 | 5.41e-179 | 512 |
| Msa0079060 | MtrunA17_Chr2g0291231 | 36.224 | 196 | 107 | 7 | 253 | 445 | 14 | 194 | 3.87e-23 | 99.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079060 | AT3G05030.1 | 77.281 | 537 | 118 | 2 | 7 | 539 | 6 | 542 | 0.0 | 847 |
| Msa0079060 | AT3G05030.4 | 77.281 | 537 | 118 | 2 | 7 | 539 | 6 | 542 | 0.0 | 847 |
| Msa0079060 | AT3G05030.2 | 77.281 | 537 | 118 | 2 | 7 | 539 | 6 | 542 | 0.0 | 847 |
| Msa0079060 | AT5G27150.1 | 77.674 | 533 | 115 | 3 | 5 | 536 | 2 | 531 | 0.0 | 822 |
| Msa0079060 | AT3G06370.3 | 73.211 | 545 | 135 | 3 | 1 | 540 | 1 | 539 | 0.0 | 760 |
| Msa0079060 | AT3G06370.4 | 73.211 | 545 | 135 | 3 | 1 | 540 | 1 | 539 | 0.0 | 760 |
| Msa0079060 | AT3G05030.3 | 81.922 | 437 | 73 | 1 | 7 | 437 | 6 | 442 | 0.0 | 724 |
| Msa0079060 | AT3G06370.1 | 74.263 | 509 | 120 | 3 | 1 | 504 | 1 | 503 | 0.0 | 711 |
| Msa0079060 | AT3G06370.2 | 80.446 | 404 | 79 | 0 | 1 | 404 | 1 | 404 | 0.0 | 637 |
| Msa0079060 | AT5G55470.1 | 58.712 | 528 | 203 | 5 | 1 | 521 | 1 | 520 | 0.0 | 607 |
| Msa0079060 | AT1G79610.1 | 31.828 | 443 | 264 | 15 | 18 | 445 | 20 | 439 | 3.31e-48 | 176 |
| Msa0079060 | AT1G54370.1 | 31.081 | 518 | 312 | 18 | 19 | 519 | 20 | 509 | 4.39e-41 | 155 |
Find 140 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATTGTATAGTCTTGTATT+TGG | 0.133117 | 1_2:+56783805 | Msa0079060:CDS |
| TACTACTGGACTTTGAAATT+TGG | 0.159315 | 1_2:+56781690 | Msa0079060:five_prime_UTR |
| CTTTCTCTGTTCGAATTCTT+TGG | 0.185435 | 1_2:+56781196 | Msa0079060:five_prime_UTR |
| TTCAATTGCATTGCATTTCT+TGG | 0.206910 | 1_2:+56783906 | Msa0079060:CDS |
| TCATTCATTGTCCCACTTCT+AGG | 0.209054 | 1_2:+56786534 | Msa0079060:CDS |
| AATGCTACTATCAATCATTT+TGG | 0.223873 | 1_2:+56781229 | Msa0079060:five_prime_UTR |
| TATTGTATAGTCTTGTATTT+GGG | 0.239719 | 1_2:+56783806 | Msa0079060:CDS |
| AGTGGGACAATGAATGATTT+TGG | 0.240398 | 1_2:-56786528 | None:intergenic |
| AGCTCAGAAACATAAATATC+TGG | 0.260306 | 1_2:+56781657 | Msa0079060:five_prime_UTR |
| AACACATATTACACATTTCA+TGG | 0.268912 | 1_2:-56786777 | None:intergenic |
| CTCACACTGTTCATCGATTA+TGG | 0.271792 | 1_2:+56786640 | Msa0079060:CDS |
| TCAAAACTCTTTCTATTTAC+CGG | 0.284679 | 1_2:+56781132 | Msa0079060:five_prime_UTR |
| ATCACATCATTTGGAGCTAT+TGG | 0.297209 | 1_2:+56783215 | Msa0079060:CDS |
| AGTGACTCAACAAGATTATT+AGG | 0.313295 | 1_2:+56780893 | Msa0079060:five_prime_UTR |
| AGATCAGAAGGTTCTTAAAA+TGG | 0.321486 | 1_2:+56781632 | Msa0079060:five_prime_UTR |
| CTGTGTGCTTGTATTGTCCT+TGG | 0.329640 | 1_2:+56781876 | Msa0079060:CDS |
| AGACTCTGTTTGCACATTGC+AGG | 0.351154 | 1_2:+56783676 | Msa0079060:CDS |
| TTCATGACTATCACATCATT+TGG | 0.361443 | 1_2:+56783206 | Msa0079060:CDS |
| TTGATGCAGTTCACCATGTC+GGG | 0.365442 | 1_2:+56785971 | Msa0079060:intron |
| TGTTCGGTCGGTGAATTTCA+TGG | 0.372487 | 1_2:-56786590 | None:intergenic |
| ATTACAATTTATCAGGTGTT+TGG | 0.372668 | 1_2:+56786423 | Msa0079060:intron |
| GGAGAGAGATGAGAAAGTTC+TGG | 0.374087 | 1_2:-56781028 | None:intergenic |
| TTGTTGGGTCTAATACTTCT+TGG | 0.378696 | 1_2:+56785531 | Msa0079060:CDS |
| TCTGTCGATATTCTATTTAG+AGG | 0.379221 | 1_2:-56780871 | None:intergenic |
| TTTAGTCAAGTTGGATAAGA+AGG | 0.381030 | 1_2:-56785580 | None:intergenic |
| CAAGTTGGATAAGAAGGATA+AGG | 0.382746 | 1_2:-56785574 | None:intergenic |
| AGCTGCAAGTTCAGTATTGT+TGG | 0.385899 | 1_2:+56785515 | Msa0079060:CDS |
| TGTTTCTATGAACTTGTTTG+TGG | 0.386146 | 1_2:+56781848 | Msa0079060:CDS |
| AATGGCACTTGCGTATAATC+AGG | 0.391176 | 1_2:+56785777 | Msa0079060:CDS |
| CTGGGATTCATTATTACTAC+TGG | 0.398345 | 1_2:+56781676 | Msa0079060:five_prime_UTR |
| ATCTTTATCTTCCTTTATGT+TGG | 0.399431 | 1_2:+56785219 | Msa0079060:CDS |
| GATTCTGAAGCTGATCTTGA+AGG | 0.399508 | 1_2:+56786567 | Msa0079060:CDS |
| TATCTTCCTTTATGTTGGTA+TGG | 0.401826 | 1_2:+56785224 | Msa0079060:CDS |
| TAGGTTATCATTTGGTGGGC+TGG | 0.409191 | 1_2:+56785733 | Msa0079060:intron |
| AATGGAAGTTTGTTAGTGAT+AGG | 0.409420 | 1_2:+56785265 | Msa0079060:CDS |
| ACTGAAAACTTACAATCAAA+AGG | 0.409719 | 1_2:-56781944 | None:intergenic |
| TCTTCTCAGGGTATTTGCAC+TGG | 0.411364 | 1_2:+56782290 | Msa0079060:intron |
| TCAATTGCATTGCATTTCTT+GGG | 0.411660 | 1_2:+56783907 | Msa0079060:CDS |
| CAAAGAATTCGAACAGAGAA+AGG | 0.413872 | 1_2:-56781195 | None:intergenic |
| CAATCCCTAGTTCGAATTCC+CGG | 0.415642 | 1_2:-56781151 | None:intergenic |
| TATGAGAGGTGCTGTTTCAA+TGG | 0.419953 | 1_2:+56785759 | Msa0079060:CDS |
| GACGATGCAGGTGCTAAATC+AGG | 0.421808 | 1_2:+56783771 | Msa0079060:intron |
| TACCCGGCATTGAATATAAT+AGG | 0.423054 | 1_2:-56782398 | None:intergenic |
| GGTAGTTGTTGTTATACAAT+GGG | 0.424935 | 1_2:-56780827 | None:intergenic |
| CTGGAAATCGGCGATTATCT+AGG | 0.425226 | 1_2:+56783552 | Msa0079060:CDS |
| CGGTAGTTGTTGTTATACAA+TGG | 0.426319 | 1_2:-56780828 | None:intergenic |
| AATACAAGACTATACAATAA+AGG | 0.427303 | 1_2:-56783802 | None:intergenic |
| GGTAAGAATGCCACTCAGAT+AGG | 0.440033 | 1_2:-56784977 | None:intergenic |
| TGAACGCAATGGTAATCAAT+GGG | 0.442698 | 1_2:+56786740 | Msa0079060:CDS |
| GGCTTACCACTGTGCTGAAA+AGG | 0.442970 | 1_2:-56786048 | None:intergenic |
| CTTGGTGAGCCAGGTTCTAC+AGG | 0.443445 | 1_2:-56786717 | None:intergenic |
| CAAGATCAGCTTCAGAATCT+CGG | 0.443542 | 1_2:-56786563 | None:intergenic |
| ATTTACCGGGAATTCGAACT+AGG | 0.447409 | 1_2:+56781146 | Msa0079060:five_prime_UTR |
| GATATTGGGCCACTGGAAAT+CGG | 0.450578 | 1_2:+56783540 | Msa0079060:CDS |
| AGTAAAGCACGAAGGCTGTT+CGG | 0.452548 | 1_2:-56786606 | None:intergenic |
| TTGTTATGTCTCATTATACT+TGG | 0.457147 | 1_2:+56785016 | Msa0079060:CDS |
| TTGCGTTCACTTGGTGAGCC+AGG | 0.466834 | 1_2:-56786726 | None:intergenic |
| TGCTGACTAAGCCACTCATA+AGG | 0.466961 | 1_2:+56786448 | Msa0079060:CDS |
| TGTGAACTAAAATCCATCAT+TGG | 0.466979 | 1_2:-56787057 | None:intergenic |
| CAAAACTCTTTCTATTTACC+GGG | 0.468448 | 1_2:+56781133 | Msa0079060:five_prime_UTR |
| GGGCATCCATACCAACATAA+AGG | 0.472613 | 1_2:-56785230 | None:intergenic |
| AAGTTGGATAAGAAGGATAA+GGG | 0.473086 | 1_2:-56785573 | None:intergenic |
| GTGAACGCAATGGTAATCAA+TGG | 0.474866 | 1_2:+56786739 | Msa0079060:CDS |
| GTTGTTGTTATACAATGGGT+TGG | 0.476547 | 1_2:-56780823 | None:intergenic |
| AAGAAATGCAATGCAATTGA+AGG | 0.486550 | 1_2:-56783904 | None:intergenic |
| GCTGCAAGTTCAGTATTGTT+GGG | 0.488198 | 1_2:+56785516 | Msa0079060:CDS |
| CTTGCAGCTATAGATGTTCC+AGG | 0.488582 | 1_2:-56785501 | None:intergenic |
| AACAATACCACAAAAGAATA+CGG | 0.489252 | 1_2:-56784998 | None:intergenic |
| TACAATCAAAAGGGCAGTGA+TGG | 0.489549 | 1_2:-56781934 | None:intergenic |
| AAGATCAGCTTCAGAATCTC+GGG | 0.489748 | 1_2:-56786562 | None:intergenic |
| TGATTACCATTGCGTTCACT+TGG | 0.493357 | 1_2:-56786735 | None:intergenic |
| TTATGTTGGTATGGATGCCC+TGG | 0.498703 | 1_2:+56785233 | Msa0079060:CDS |
| AACAGAAGCATGATCGGAAG+TGG | 0.501203 | 1_2:-56781826 | None:intergenic |
| ACACATACACAAACATGTAA+TGG | 0.502601 | 1_2:-56787000 | None:intergenic |
| CCGCCTATTATATTCAATGC+CGG | 0.505451 | 1_2:+56782395 | Msa0079060:CDS |
| CTATCTACACTCTCCAATGA+TGG | 0.507711 | 1_2:+56787044 | Msa0079060:three_prime_UTR |
| GTGATGAATTATGCAGAAGA+AGG | 0.509014 | 1_2:-56781094 | None:intergenic |
| CGCCTATTATATTCAATGCC+GGG | 0.509321 | 1_2:+56782396 | Msa0079060:CDS |
| GAGGATGGATATTGGGCCAC+TGG | 0.510833 | 1_2:+56783533 | Msa0079060:CDS |
| TATAGTCTTGTATTTGGGGA+AGG | 0.512404 | 1_2:+56783811 | Msa0079060:CDS |
| TGCTTGCTACAAACAAATAC+AGG | 0.513396 | 1_2:-56783936 | None:intergenic |
| TTTGATGCAGTTCACCATGT+CGG | 0.516704 | 1_2:+56785970 | Msa0079060:intron |
| TTTGTAGCAAGCACACTCCT+TGG | 0.519299 | 1_2:+56783946 | Msa0079060:CDS |
| GGCATACCTCTCCTATATGC+TGG | 0.520496 | 1_2:+56784857 | Msa0079060:CDS |
| TGGCCATACTTGCTGTCTGA+AGG | 0.525975 | 1_2:-56785625 | None:intergenic |
| ACCTACCTCAGCCAGCATAT+AGG | 0.526592 | 1_2:-56784868 | None:intergenic |
| GCTCAGAAACATAAATATCT+GGG | 0.530136 | 1_2:+56781658 | Msa0079060:five_prime_UTR |
| GGTTGCTCTTATGATGCTAA+TGG | 0.530635 | 1_2:+56784836 | Msa0079060:CDS |
| AGCAACGCGTGATGATGAAT+CGG | 0.531376 | 1_2:-56780955 | None:intergenic |
| GTGGAGGGTGGACGACATCA+TGG | 0.532330 | 1_2:+56781761 | Msa0079060:exon |
| CTGAAAACTTACAATCAAAA+GGG | 0.534892 | 1_2:-56781943 | None:intergenic |
| AGAAACAACAGAAGCATGAT+CGG | 0.540009 | 1_2:-56781832 | None:intergenic |
| AGAGAGATATTATATATCTC+CGG | 0.540483 | 1_2:-56780848 | None:intergenic |
| ATGCAATTGAAGGGTTCAGT+TGG | 0.548283 | 1_2:-56783894 | None:intergenic |
| TTTGAGTAGCTAGTATGAGA+TGG | 0.559053 | 1_2:+56786923 | Msa0079060:three_prime_UTR |
| CATTGTATAACAACAACTAC+CGG | 0.568653 | 1_2:+56780829 | Msa0079060:five_prime_UTR |
| TTTACCGGGAATTCGAACTA+GGG | 0.570945 | 1_2:+56781147 | Msa0079060:five_prime_UTR |
| TGATGAATTATGCAGAAGAA+GGG | 0.572686 | 1_2:-56781093 | None:intergenic |
| AAGAGCAACCTCACGATCTG+TGG | 0.575236 | 1_2:-56784823 | None:intergenic |
| ATCTTCTCGAGGAGAATCGA+TGG | 0.579050 | 1_2:+56781901 | Msa0079060:CDS |
| AATCGATGAACAGTGTGAGT+TGG | 0.579424 | 1_2:-56786636 | None:intergenic |
| TCATCATCACGCGTTGCTCG+AGG | 0.587162 | 1_2:+56780960 | Msa0079060:five_prime_UTR |
| AAGCACACTCCTTGGCGTTG+TGG | 0.587805 | 1_2:+56783954 | Msa0079060:CDS |
| TCTCGGGAATCTCCTAGAAG+TGG | 0.589238 | 1_2:-56786546 | None:intergenic |
| CTTGTGTTGATGAGATCAGA+AGG | 0.590827 | 1_2:+56781620 | Msa0079060:five_prime_UTR |
| TGAATATAATAGGCGGCAGA+AGG | 0.597021 | 1_2:-56782388 | None:intergenic |
| ATCTTGTGTCATTATAACCA+CGG | 0.600760 | 1_2:+56783247 | Msa0079060:CDS |
| TCTTGTGTCATTATAACCAC+GGG | 0.605584 | 1_2:+56783248 | Msa0079060:CDS |
| CCTCTCCTATATGCTGGCTG+AGG | 0.606924 | 1_2:+56784863 | Msa0079060:CDS |
| TGGTGGGCTGGTCTTATGAG+AGG | 0.607118 | 1_2:+56785745 | Msa0079060:CDS |
| GATAAAGATCTCAGCAACAA+AGG | 0.607883 | 1_2:-56785205 | None:intergenic |
| CTCGGGAATCTCCTAGAAGT+GGG | 0.609122 | 1_2:-56786545 | None:intergenic |
| ATTGTATAGTCTTGTATTTG+GGG | 0.609143 | 1_2:+56783807 | Msa0079060:CDS |
| AGAAATGCAATGCAATTGAA+GGG | 0.611163 | 1_2:-56783903 | None:intergenic |
| AAGCACGAAGGCTGTTCGGT+CGG | 0.612423 | 1_2:-56786602 | None:intergenic |
| TGTCCTTGGTCATCTTCTCG+AGG | 0.623388 | 1_2:+56781890 | Msa0079060:CDS |
| CTCAACAAAATTTCACTACG+AGG | 0.628436 | 1_2:-56786897 | None:intergenic |
| TTAGGAGTGATAATCTTCCA+CGG | 0.640851 | 1_2:+56780911 | Msa0079060:five_prime_UTR |
| TAGTTGAGTATGCCCCGACA+TGG | 0.643424 | 1_2:-56785984 | None:intergenic |
| TTACATAATAGACAGAGAGA+TGG | 0.644211 | 1_2:-56786950 | None:intergenic |
| TGATGCAGTTCACCATGTCG+GGG | 0.644290 | 1_2:+56785972 | Msa0079060:intron |
| CAGGCACTCCACAGATCGTG+AGG | 0.650350 | 1_2:+56784815 | Msa0079060:intron |
| AAGGACAACAGTGATGGTGC+TGG | 0.652906 | 1_2:-56786029 | None:intergenic |
| AGATAATCGCCGATTTCCAG+TGG | 0.654519 | 1_2:-56783549 | None:intergenic |
| GAGAAAGTTCTGGAAGACAA+TGG | 0.655034 | 1_2:-56781018 | None:intergenic |
| GATCTCAGCAACAAAGGACA+AGG | 0.655763 | 1_2:-56785199 | None:intergenic |
| TGTGCAAACAGAGTCTGTTG+CGG | 0.676521 | 1_2:-56783669 | None:intergenic |
| AGGCATTTACCACAACGCCA+AGG | 0.680339 | 1_2:-56783963 | None:intergenic |
| GGCTCACCAAGTGAACGCAA+TGG | 0.680619 | 1_2:+56786729 | Msa0079060:CDS |
| CCTCAGCCAGCATATAGGAG+AGG | 0.687456 | 1_2:-56784863 | None:intergenic |
| GAACGCAATGGTAATCAATG+GGG | 0.694035 | 1_2:+56786741 | Msa0079060:CDS |
| CCGGCATTGAATATAATAGG+CGG | 0.694673 | 1_2:-56782395 | None:intergenic |
| AGAAAGAGAGAAAATACACG+TGG | 0.697943 | 1_2:-56781049 | None:intergenic |
| GCTGAAAAGGACAACAGTGA+TGG | 0.701655 | 1_2:-56786035 | None:intergenic |
| GGTAGTAGAAGCCTTATGAG+TGG | 0.701911 | 1_2:-56786459 | None:intergenic |
| TCTCCTCGAGAAGATGACCA+AGG | 0.718020 | 1_2:-56781893 | None:intergenic |
| ATGCAGTTAACCTATCTGAG+TGG | 0.719464 | 1_2:+56784967 | Msa0079060:intron |
| TGCATTGAAAAGAACCACTG+AGG | 0.727765 | 1_2:-56783851 | None:intergenic |
| TGTGAATGATGCTACCTCAG+TGG | 0.753451 | 1_2:+56783837 | Msa0079060:CDS |
| GAGTTGATAGTAAAGCACGA+AGG | 0.775920 | 1_2:-56786614 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAAAATTAAGAAAAA+AGG | - | chr1_2:56781433-56781452 | None:intergenic | 10.0% |
| !!! | AGTTTTTTATTTTTGTATAT+TGG | + | chr1_2:56781515-56781534 | Msa0079060:intron | 10.0% |
| !!! | AAAAACATGATTTAATTTGA+CGG | + | chr1_2:56781400-56781419 | Msa0079060:intron | 15.0% |
| !!! | GCATCTATTTATTTATTTTT+TGG | + | chr1_2:56782231-56782250 | Msa0079060:intron | 15.0% |
| !!! | ATTTATTTTTTGGTTTCTAT+TGG | + | chr1_2:56782241-56782260 | Msa0079060:intron | 15.0% |
| !! | AAATTAATTTATGCAAAAAG+AGG | + | chr1_2:56782652-56782671 | Msa0079060:intron | 15.0% |
| !!! | TGGTTATGAATTTTTTTATA+TGG | - | chr1_2:56783007-56783026 | None:intergenic | 15.0% |
| !!! | AATATTTCTTTTAGTTGATT+AGG | - | chr1_2:56783425-56783444 | None:intergenic | 15.0% |
| !! | ATGTTATATTGAAAATACAA+TGG | - | chr1_2:56784166-56784185 | None:intergenic | 15.0% |
| !! | ATATATACAATATAACAGAT+TGG | - | chr1_2:56784203-56784222 | None:intergenic | 15.0% |
| !! | TAATATTTGAACATTTAGAA+TGG | - | chr1_2:56784473-56784492 | None:intergenic | 15.0% |
| !! | AAATAATATAATGAAGAGAT+AGG | + | chr1_2:56784514-56784533 | Msa0079060:intron | 15.0% |
| !! | AAATAATTACATTGTTTCAA+TGG | + | chr1_2:56784679-56784698 | Msa0079060:intron | 15.0% |
| !!! | AAATAGAAAGAGTTTTGAAA+TGG | - | chr1_2:56781130-56781149 | None:intergenic | 20.0% |
| !! | AGCACTTACATATAATATAA+AGG | + | chr1_2:56781254-56781273 | Msa0079060:intron | 20.0% |
| !! | GCACTTACATATAATATAAA+GGG | + | chr1_2:56781255-56781274 | Msa0079060:intron | 20.0% |
| !!! | AAAACATGATTTAATTTGAC+GGG | + | chr1_2:56781401-56781420 | Msa0079060:intron | 20.0% |
| !! | AGGAATATATATTACCAAAT+AGG | + | chr1_2:56781481-56781500 | Msa0079060:intron | 20.0% |
| !!! | ATTTGTCATGTTTTGTATAT+TGG | + | chr1_2:56781555-56781574 | Msa0079060:intron | 20.0% |
| !! | CCTAATAAATAAATCTAAAG+AGG | - | chr1_2:56783283-56783302 | None:intergenic | 20.0% |
| !! | CCTCTTTAGATTTATTTATT+AGG | + | chr1_2:56783280-56783299 | Msa0079060:intron | 20.0% |
| !!! | TTGTGATAATTTTTAGCTAT+TGG | + | chr1_2:56783635-56783654 | Msa0079060:intron | 20.0% |
| !! | AATACAAGACTATACAATAA+AGG | - | chr1_2:56783805-56783824 | None:intergenic | 20.0% |
| !!! | TTATTGTATAGTCTTGTATT+TGG | + | chr1_2:56783805-56783824 | Msa0079060:CDS | 20.0% |
| !!! | TATTGTATAGTCTTGTATTT+GGG | + | chr1_2:56783806-56783825 | Msa0079060:CDS | 20.0% |
| !! | TATTGAAAATACAATGGAAA+TGG | - | chr1_2:56784160-56784179 | None:intergenic | 20.0% |
| !! | TTCAATATAACATGATATGA+TGG | + | chr1_2:56784173-56784192 | Msa0079060:intron | 20.0% |
| !!! | GTTTTGGATATTTGAATAAT+TGG | + | chr1_2:56785824-56785843 | Msa0079060:intron | 20.0% |
| !! | AGTTATAGCTATTTATTGTT+TGG | - | chr1_2:56785862-56785881 | None:intergenic | 20.0% |
| !! | CAAGTTAATTACAATTTATC+AGG | + | chr1_2:56786416-56786435 | Msa0079060:intron | 20.0% |
| !! | TAAAGAAAAATTTCACTACT+AGG | - | chr1_2:56786867-56786886 | None:intergenic | 20.0% |
| ! | AGAGAGATATTATATATCTC+CGG | - | chr1_2:56780851-56780870 | None:intergenic | 25.0% |
| ! | TCAAAACTCTTTCTATTTAC+CGG | + | chr1_2:56781132-56781151 | Msa0079060:five_prime_UTR | 25.0% |
| !! | AATGCTACTATCAATCATTT+TGG | + | chr1_2:56781229-56781248 | Msa0079060:five_prime_UTR | 25.0% |
| !!! | TTTTCTTTTGCCTTGTTTTT+TGG | + | chr1_2:56781448-56781467 | Msa0079060:intron | 25.0% |
| ! | AATTCCAATTCCAAAAAACA+AGG | - | chr1_2:56781461-56781480 | None:intergenic | 25.0% |
| !!! | TGTTTTTTGGAATTGGAATT+AGG | + | chr1_2:56781461-56781480 | Msa0079060:intron | 25.0% |
| ! | TATATTACCAAATAGGTTCT+AGG | + | chr1_2:56781488-56781507 | Msa0079060:intron | 25.0% |
| !!! | AAATCTGCTTTTGAAATTTG+TGG | + | chr1_2:56781742-56781761 | Msa0079060:five_prime_UTR | 25.0% |
| ! | CTGAAAACTTACAATCAAAA+GGG | - | chr1_2:56781946-56781965 | None:intergenic | 25.0% |
| ! | ACTGAAAACTTACAATCAAA+AGG | - | chr1_2:56781947-56781966 | None:intergenic | 25.0% |
| ! | AACTCATTCTCCAAATATTA+TGG | + | chr1_2:56782007-56782026 | Msa0079060:intron | 25.0% |
| ! | ACTCATTCTCCAAATATTAT+GGG | + | chr1_2:56782008-56782027 | Msa0079060:intron | 25.0% |
| ! | ATGTGATGTTCCAATTAAAA+GGG | + | chr1_2:56782490-56782509 | Msa0079060:intron | 25.0% |
| ! | CTAGTTTCAAATCATCATAT+TGG | - | chr1_2:56782586-56782605 | None:intergenic | 25.0% |
| ! | ATAATTAACGGTTTACTCAA+TGG | + | chr1_2:56782676-56782695 | Msa0079060:intron | 25.0% |
| !!! | TGCTTTTTTAAAAGTGACTT+AGG | + | chr1_2:56782773-56782792 | Msa0079060:intron | 25.0% |
| ! | CTAAGTGTAGTTAATTTAAG+AGG | - | chr1_2:56782858-56782877 | None:intergenic | 25.0% |
| ! | AACTAAAACAGCTATTCTAA+TGG | + | chr1_2:56782952-56782971 | Msa0079060:intron | 25.0% |
| !!! | TGAATGAAGTATTTTTGAAG+GGG | - | chr1_2:56783039-56783058 | None:intergenic | 25.0% |
| !!! | CTGAATGAAGTATTTTTGAA+GGG | - | chr1_2:56783040-56783059 | None:intergenic | 25.0% |
| ! | TGTTCTCTGTAATATATTTC+AGG | + | chr1_2:56783150-56783169 | Msa0079060:intron | 25.0% |
| ! | TAAATATGAGCCATTATTTC+AGG | + | chr1_2:56783492-56783511 | Msa0079060:intron | 25.0% |
| !!! | ATTGTATAGTCTTGTATTTG+GGG | + | chr1_2:56783807-56783826 | Msa0079060:CDS | 25.0% |
| ! | GTTATTAAAAAGCTGTACAT+TGG | + | chr1_2:56784112-56784131 | Msa0079060:CDS | 25.0% |
| ! | AAGCAATGTTCTATGTTAAA+TGG | + | chr1_2:56784353-56784372 | Msa0079060:intron | 25.0% |
| ! | TATATTGAATCCTATCATTC+TGG | - | chr1_2:56784396-56784415 | None:intergenic | 25.0% |
| !!! | TCTTAAATTTGTTGCTGTTT+AGG | + | chr1_2:56784654-56784673 | Msa0079060:intron | 25.0% |
| !! | AGAACTTTAGTAATGTTTTC+TGG | + | chr1_2:56784896-56784915 | Msa0079060:intron | 25.0% |
| ! | AACAATACCACAAAAGAATA+CGG | - | chr1_2:56785001-56785020 | None:intergenic | 25.0% |
| ! | TTGTTATGTCTCATTATACT+TGG | + | chr1_2:56785016-56785035 | Msa0079060:CDS | 25.0% |
| ! | ATCTTTATCTTCCTTTATGT+TGG | + | chr1_2:56785219-56785238 | Msa0079060:CDS | 25.0% |
| ! | AAAAATCGCTCAGTAAAAAA+GGG | - | chr1_2:56785336-56785355 | None:intergenic | 25.0% |
| ! | TAAAAATCGCTCAGTAAAAA+AGG | - | chr1_2:56785337-56785356 | None:intergenic | 25.0% |
| ! | TAGGAAGAAAAAAACAGTTA+AGG | - | chr1_2:56785450-56785469 | None:intergenic | 25.0% |
| !!! | TTGTGATTTTTTAGTCAAGT+TGG | - | chr1_2:56785592-56785611 | None:intergenic | 25.0% |
| ! | AAATGATAACCTAAAATGAG+GGG | - | chr1_2:56785726-56785745 | None:intergenic | 25.0% |
| ! | CAAATGATAACCTAAAATGA+GGG | - | chr1_2:56785727-56785746 | None:intergenic | 25.0% |
| !!! | ATTTTAGGTTATCATTTGGT+GGG | + | chr1_2:56785729-56785748 | Msa0079060:intron | 25.0% |
| ! | TATAACTGATCCTATCTATT+GGG | + | chr1_2:56785875-56785894 | Msa0079060:intron | 25.0% |
| ! | AAAGAATTTCCTACATTTCA+TGG | - | chr1_2:56786260-56786279 | None:intergenic | 25.0% |
| ! | ATTACAATTTATCAGGTGTT+TGG | + | chr1_2:56786423-56786442 | Msa0079060:intron | 25.0% |
| ! | AACACATATTACACATTTCA+TGG | - | chr1_2:56786780-56786799 | None:intergenic | 25.0% |
| ! | GGTAGTTGTTGTTATACAAT+GGG | - | chr1_2:56780830-56780849 | None:intergenic | 30.0% |
| CATTGTATAACAACAACTAC+CGG | + | chr1_2:56780829-56780848 | Msa0079060:five_prime_UTR | 30.0% | |
| TCTGTCGATATTCTATTTAG+AGG | - | chr1_2:56780874-56780893 | None:intergenic | 30.0% | |
| AGTGACTCAACAAGATTATT+AGG | + | chr1_2:56780893-56780912 | Msa0079060:five_prime_UTR | 30.0% | |
| TGATGAATTATGCAGAAGAA+GGG | - | chr1_2:56781096-56781115 | None:intergenic | 30.0% | |
| !!! | AGAAAGAGTTTTGAAATGGT+TGG | - | chr1_2:56781126-56781145 | None:intergenic | 30.0% |
| CAAAACTCTTTCTATTTACC+GGG | + | chr1_2:56781133-56781152 | Msa0079060:five_prime_UTR | 30.0% | |
| !!! | TTTGCCTTGTTTTTTGGAAT+TGG | + | chr1_2:56781454-56781473 | Msa0079060:intron | 30.0% |
| AGATCAGAAGGTTCTTAAAA+TGG | + | chr1_2:56781632-56781651 | Msa0079060:five_prime_UTR | 30.0% | |
| AGCTCAGAAACATAAATATC+TGG | + | chr1_2:56781657-56781676 | Msa0079060:five_prime_UTR | 30.0% | |
| GCTCAGAAACATAAATATCT+GGG | + | chr1_2:56781658-56781677 | Msa0079060:five_prime_UTR | 30.0% | |
| !! | TACTACTGGACTTTGAAATT+TGG | + | chr1_2:56781690-56781709 | Msa0079060:five_prime_UTR | 30.0% |
| ! | TGTTTCTATGAACTTGTTTG+TGG | + | chr1_2:56781848-56781867 | Msa0079060:CDS | 30.0% |
| TCATTTGAACAACTAGCTAA+AGG | - | chr1_2:56781972-56781991 | None:intergenic | 30.0% | |
| ! | ATGCTTAGTTTGAGCTATAT+TGG | + | chr1_2:56782206-56782225 | Msa0079060:intron | 30.0% |
| !! | TGATGATGGCTAAATGTTAT+TGG | + | chr1_2:56782265-56782284 | Msa0079060:intron | 30.0% |
| AATGTTATTGGATTCTTCTC+AGG | + | chr1_2:56782277-56782296 | Msa0079060:intron | 30.0% | |
| ATGTTATTGGATTCTTCTCA+GGG | + | chr1_2:56782278-56782297 | Msa0079060:intron | 30.0% | |
| TTCCATAGTAGACAATAAGA+TGG | - | chr1_2:56782436-56782455 | None:intergenic | 30.0% | |
| CATGTGATGTTCCAATTAAA+AGG | + | chr1_2:56782489-56782508 | Msa0079060:intron | 30.0% | |
| TGTGATGTTCCAATTAAAAG+GGG | + | chr1_2:56782491-56782510 | Msa0079060:intron | 30.0% | |
| TCATCATATTGGTATGAATG+TGG | - | chr1_2:56782575-56782594 | None:intergenic | 30.0% | |
| ! | CACTTCTTTATGCGTATTTT+TGG | + | chr1_2:56782624-56782643 | Msa0079060:intron | 30.0% |
| ! | GCAAAAAGAGGCATAATTAA+CGG | + | chr1_2:56782664-56782683 | Msa0079060:intron | 30.0% |
| AGAGATGAATTCACAAACAT+AGG | - | chr1_2:56782805-56782824 | None:intergenic | 30.0% | |
| ATCTACAAGAAAAATCCAAG+AGG | - | chr1_2:56782882-56782901 | None:intergenic | 30.0% | |
| ! | GATTTTTCTTGTAGATACCA+TGG | + | chr1_2:56782886-56782905 | Msa0079060:intron | 30.0% |
| !! | GCTGAATGAAGTATTTTTGA+AGG | - | chr1_2:56783041-56783060 | None:intergenic | 30.0% |
| AATTTCATTGTGCGTAAATG+TGG | + | chr1_2:56783097-56783116 | Msa0079060:intron | 30.0% | |
| TTCATGACTATCACATCATT+TGG | + | chr1_2:56783206-56783225 | Msa0079060:CDS | 30.0% | |
| ! | ATCTTGTGTCATTATAACCA+CGG | + | chr1_2:56783247-56783266 | Msa0079060:CDS | 30.0% |
| TGAAAAAGCAAAGGTTAGTA+AGG | - | chr1_2:56783371-56783390 | None:intergenic | 30.0% | |
| GCTTTCAATTGAAAAAGCAA+AGG | - | chr1_2:56783380-56783399 | None:intergenic | 30.0% | |
| AAAAGTAGCACCTGAAATAA+TGG | - | chr1_2:56783505-56783524 | None:intergenic | 30.0% | |
| !! | TACTTTTGCTTTTAAGAGGA+TGG | + | chr1_2:56783518-56783537 | Msa0079060:CDS | 30.0% |
| !! | CTTTTAAGAGGATGGATATT+GGG | + | chr1_2:56783526-56783545 | Msa0079060:CDS | 30.0% |
| ACTAGTCAATCTTATCTAGT+TGG | + | chr1_2:56783581-56783600 | Msa0079060:intron | 30.0% | |
| AGAAATGCAATGCAATTGAA+GGG | - | chr1_2:56783906-56783925 | None:intergenic | 30.0% | |
| AAGAAATGCAATGCAATTGA+AGG | - | chr1_2:56783907-56783926 | None:intergenic | 30.0% | |
| TTCAATTGCATTGCATTTCT+TGG | + | chr1_2:56783906-56783925 | Msa0079060:CDS | 30.0% | |
| TCAATTGCATTGCATTTCTT+GGG | + | chr1_2:56783907-56783926 | Msa0079060:CDS | 30.0% | |
| TACGAAAATTAGACTGAACT+TGG | + | chr1_2:56784323-56784342 | Msa0079060:intron | 30.0% | |
| AAATTAGACTGAACTTGGTT+TGG | + | chr1_2:56784328-56784347 | Msa0079060:intron | 30.0% | |
| TTCCATATTGAGTACTATGT+AGG | + | chr1_2:56784750-56784769 | Msa0079060:intron | 30.0% | |
| TCCATATTGAGTACTATGTA+GGG | + | chr1_2:56784751-56784770 | Msa0079060:intron | 30.0% | |
| ! | ATTCTTACCGTATTCTTTTG+TGG | + | chr1_2:56784991-56785010 | Msa0079060:CDS | 30.0% |
| ATCTGTTTAGAAGACATACT+TGG | - | chr1_2:56785073-56785092 | None:intergenic | 30.0% | |
| AGATATAGAAAAGACATGTC+TGG | - | chr1_2:56785135-56785154 | None:intergenic | 30.0% | |
| ! | ATTTTTGTCCAACTTTTCAC+AGG | + | chr1_2:56785163-56785182 | Msa0079060:intron | 30.0% |
| TATCTTCCTTTATGTTGGTA+TGG | + | chr1_2:56785224-56785243 | Msa0079060:CDS | 30.0% | |
| !! | AATGGAAGTTTGTTAGTGAT+AGG | + | chr1_2:56785265-56785284 | Msa0079060:CDS | 30.0% |
| AAGTTGGATAAGAAGGATAA+GGG | - | chr1_2:56785576-56785595 | None:intergenic | 30.0% | |
| !! | TTTAGTCAAGTTGGATAAGA+AGG | - | chr1_2:56785583-56785602 | None:intergenic | 30.0% |
| AAGGTCACTCAATAGAAATT+TGG | - | chr1_2:56785648-56785667 | None:intergenic | 30.0% | |
| AAGCACAAGAAATACAGAAA+AGG | - | chr1_2:56785667-56785686 | None:intergenic | 30.0% | |
| ATTTCTTGTGCTTAATACCA+AGG | + | chr1_2:56785674-56785693 | Msa0079060:intron | 30.0% | |
| CCAAATGATAACCTAAAATG+AGG | - | chr1_2:56785728-56785747 | None:intergenic | 30.0% | |
| !!! | CCTCATTTTAGGTTATCATT+TGG | + | chr1_2:56785725-56785744 | Msa0079060:intron | 30.0% |
| !!! | CATTTTAGGTTATCATTTGG+TGG | + | chr1_2:56785728-56785747 | Msa0079060:intron | 30.0% |
| CTATAACTGATCCTATCTAT+TGG | + | chr1_2:56785874-56785893 | Msa0079060:intron | 30.0% | |
| ! | AAACCTTTTTCCCAATAGAT+AGG | - | chr1_2:56785888-56785907 | None:intergenic | 30.0% |
| GTCAGAAACTGCAAAATTAA+TGG | - | chr1_2:56786072-56786091 | None:intergenic | 30.0% | |
| !!! | CAACAATTAGTCTTTGGTTT+TGG | + | chr1_2:56786233-56786252 | Msa0079060:intron | 30.0% |
| TTACATAATAGACAGAGAGA+TGG | - | chr1_2:56786953-56786972 | None:intergenic | 30.0% | |
| ACACATACACAAACATGTAA+TGG | - | chr1_2:56787003-56787022 | None:intergenic | 30.0% | |
| TGTGAACTAAAATCCATCAT+TGG | - | chr1_2:56787060-56787079 | None:intergenic | 30.0% | |
| ! | GTTGTTGTTATACAATGGGT+TGG | - | chr1_2:56780826-56780845 | None:intergenic | 35.0% |
| ! | CGGTAGTTGTTGTTATACAA+TGG | - | chr1_2:56780831-56780850 | None:intergenic | 35.0% |
| TTAGGAGTGATAATCTTCCA+CGG | + | chr1_2:56780911-56780930 | Msa0079060:five_prime_UTR | 35.0% | |
| AGAAAGAGAGAAAATACACG+TGG | - | chr1_2:56781052-56781071 | None:intergenic | 35.0% | |
| GTGATGAATTATGCAGAAGA+AGG | - | chr1_2:56781097-56781116 | None:intergenic | 35.0% | |
| !!! | GTTTTGAAATGGTTGGATCA+GGG | - | chr1_2:56781119-56781138 | None:intergenic | 35.0% |
| !!! | AGTTTTGAAATGGTTGGATC+AGG | - | chr1_2:56781120-56781139 | None:intergenic | 35.0% |
| CAAAGAATTCGAACAGAGAA+AGG | - | chr1_2:56781198-56781217 | None:intergenic | 35.0% | |
| CTTTCTCTGTTCGAATTCTT+TGG | + | chr1_2:56781196-56781215 | Msa0079060:five_prime_UTR | 35.0% | |
| ! | TATAAAGGGTTTTCTGTAGC+AGG | + | chr1_2:56781269-56781288 | Msa0079060:intron | 35.0% |
| ! | ATAAAGGGTTTTCTGTAGCA+GGG | + | chr1_2:56781270-56781289 | Msa0079060:intron | 35.0% |
| ACTCATACCTAGAACCTATT+TGG | - | chr1_2:56781498-56781517 | None:intergenic | 35.0% | |
| CTGGGATTCATTATTACTAC+TGG | + | chr1_2:56781676-56781695 | Msa0079060:five_prime_UTR | 35.0% | |
| !!! | TCTGCTTTTGAAATTTGTGG+AGG | + | chr1_2:56781745-56781764 | Msa0079060:five_prime_UTR | 35.0% |
| !!! | CTGCTTTTGAAATTTGTGGA+GGG | + | chr1_2:56781746-56781765 | Msa0079060:five_prime_UTR | 35.0% |
| ! | AGAAACAACAGAAGCATGAT+CGG | - | chr1_2:56781835-56781854 | None:intergenic | 35.0% |
| TAGACAGAGCCCATAATATT+TGG | - | chr1_2:56782020-56782039 | None:intergenic | 35.0% | |
| TGGATTCACGTTTGATCTAA+TGG | + | chr1_2:56782065-56782084 | Msa0079060:intron | 35.0% | |
| AAGACTTATTGATCCAATGG+TGG | + | chr1_2:56782089-56782108 | Msa0079060:intron | 35.0% | |
| TTGTGCACCATAGAAAGAAT+TGG | + | chr1_2:56782147-56782166 | Msa0079060:intron | 35.0% | |
| AGTTCAGCCAATTCTTTCTA+TGG | - | chr1_2:56782157-56782176 | None:intergenic | 35.0% | |
| TGGTTTCTATTGGATGATGA+TGG | + | chr1_2:56782251-56782270 | Msa0079060:intron | 35.0% | |
| !!! | GTAGTGATTTTGCTGTTTAG+TGG | + | chr1_2:56782314-56782333 | Msa0079060:CDS | 35.0% |
| ! | TACCCGGCATTGAATATAAT+AGG | - | chr1_2:56782401-56782420 | None:intergenic | 35.0% |
| ATGGTGCAAAATAACTTACC+CGG | - | chr1_2:56782417-56782436 | None:intergenic | 35.0% | |
| CACCATCTTATTGTCTACTA+TGG | + | chr1_2:56782431-56782450 | Msa0079060:intron | 35.0% | |
| ! | AAACATCCTCCCCTTTTAAT+TGG | - | chr1_2:56782503-56782522 | None:intergenic | 35.0% |
| AATTAAAAGGGGAGGATGTT+TGG | + | chr1_2:56782502-56782521 | Msa0079060:intron | 35.0% | |
| ATTAACGGTTTACTCAATGG+CGG | + | chr1_2:56782679-56782698 | Msa0079060:intron | 35.0% | |
| TTAACTACACTTAGTCCTCT+TGG | + | chr1_2:56782864-56782883 | Msa0079060:intron | 35.0% | |
| !! | TTTTGAAGGGGAAAACGATA+TGG | - | chr1_2:56783027-56783046 | None:intergenic | 35.0% |
| ! | ATCACATCATTTGGAGCTAT+TGG | + | chr1_2:56783215-56783234 | Msa0079060:CDS | 35.0% |
| ! | TCTTGTGTCATTATAACCAC+GGG | + | chr1_2:56783248-56783267 | Msa0079060:CDS | 35.0% |
| CTTATAAAAACCAACTGCAG+AGG | + | chr1_2:56783447-56783466 | Msa0079060:intron | 35.0% | |
| GGCTCATATTTAAGTCAACA+TGG | - | chr1_2:56783484-56783503 | None:intergenic | 35.0% | |
| !!! | GTGCTACTTTTGCTTTTAAG+AGG | + | chr1_2:56783514-56783533 | Msa0079060:CDS | 35.0% |
| !! | GCTTTTAAGAGGATGGATAT+TGG | + | chr1_2:56783525-56783544 | Msa0079060:CDS | 35.0% |
| !! | TATAGTCTTGTATTTGGGGA+AGG | + | chr1_2:56783811-56783830 | Msa0079060:CDS | 35.0% |
| ! | TGCTTGCTACAAACAAATAC+AGG | - | chr1_2:56783939-56783958 | None:intergenic | 35.0% |
| TTAAAAAGCTGTACATTGGC+AGG | + | chr1_2:56784116-56784135 | Msa0079060:CDS | 35.0% | |
| TACAAGAAATAGCCAGAACT+TGG | - | chr1_2:56784277-56784296 | None:intergenic | 35.0% | |
| AAACTGTAGAGTGTAGACAT+TGG | - | chr1_2:56784304-56784323 | None:intergenic | 35.0% | |
| AGATGTAATTCCACAAAGCT+TGG | + | chr1_2:56784542-56784561 | Msa0079060:intron | 35.0% | |
| GATGTAATTCCACAAAGCTT+GGG | + | chr1_2:56784543-56784562 | Msa0079060:intron | 35.0% | |
| ATGTAATTCCACAAAGCTTG+GGG | + | chr1_2:56784544-56784563 | Msa0079060:intron | 35.0% | |
| TCCCTACATAGTACTCAATA+TGG | - | chr1_2:56784755-56784774 | None:intergenic | 35.0% | |
| ! | ATGATTTTCTCCTTCATTCC+AGG | + | chr1_2:56784796-56784815 | Msa0079060:intron | 35.0% |
| AAAGAATGCCTGTGAAAAGT+TGG | - | chr1_2:56785174-56785193 | None:intergenic | 35.0% | |
| GATAAAGATCTCAGCAACAA+AGG | - | chr1_2:56785208-56785227 | None:intergenic | 35.0% | |
| !! | CTTCCATTTTTCAATGTCCA+GGG | - | chr1_2:56785253-56785272 | None:intergenic | 35.0% |
| !! | ACTTCCATTTTTCAATGTCC+AGG | - | chr1_2:56785254-56785273 | None:intergenic | 35.0% |
| ATGTCCTAAGTTCTCTTTAC+TGG | + | chr1_2:56785289-56785308 | Msa0079060:intron | 35.0% | |
| ATCACCAGTAAAGAGAACTT+AGG | - | chr1_2:56785296-56785315 | None:intergenic | 35.0% | |
| ! | CATCTTTTCATGTCCATAGA+TGG | + | chr1_2:56785367-56785386 | Msa0079060:intron | 35.0% |
| CAGTTCTATCATACCATCTA+TGG | - | chr1_2:56785383-56785402 | None:intergenic | 35.0% | |
| TTGTTGGGTCTAATACTTCT+TGG | + | chr1_2:56785531-56785550 | Msa0079060:CDS | 35.0% | |
| ! | CAAGTTGGATAAGAAGGATA+AGG | - | chr1_2:56785577-56785596 | None:intergenic | 35.0% |
| TATCCAAAACCAAAACTCAG+TGG | - | chr1_2:56785814-56785833 | None:intergenic | 35.0% | |
| GATCCTATCTATTGGGAAAA+AGG | + | chr1_2:56785882-56785901 | Msa0079060:intron | 35.0% | |
| CTATTGGGAAAAAGGTTTGA+TGG | + | chr1_2:56785890-56785909 | Msa0079060:intron | 35.0% | |
| ! | GTTGTTGTTGTCACAAATGA+CGG | + | chr1_2:56785918-56785937 | Msa0079060:intron | 35.0% |
| GTGAACTGCATCAAATAGAT+AGG | - | chr1_2:56785965-56785984 | None:intergenic | 35.0% | |
| ATAAAATAAACCGTGCAGTG+AGG | - | chr1_2:56786122-56786141 | None:intergenic | 35.0% | |
| !! | TTCCTGCAACAATTAGTCTT+TGG | + | chr1_2:56786227-56786246 | Msa0079060:intron | 35.0% |
| AACCAAAGACTAATTGTTGC+AGG | - | chr1_2:56786232-56786251 | None:intergenic | 35.0% | |
| ! | AGTGGGACAATGAATGATTT+TGG | - | chr1_2:56786531-56786550 | None:intergenic | 35.0% |
| TGAACGCAATGGTAATCAAT+GGG | + | chr1_2:56786740-56786759 | Msa0079060:CDS | 35.0% | |
| CTCAACAAAATTTCACTACG+AGG | - | chr1_2:56786900-56786919 | None:intergenic | 35.0% | |
| TTTGAGTAGCTAGTATGAGA+TGG | + | chr1_2:56786923-56786942 | Msa0079060:three_prime_UTR | 35.0% | |
| !! | GAGAAAGTTCTGGAAGACAA+TGG | - | chr1_2:56781021-56781040 | None:intergenic | 40.0% |
| ATTTACCGGGAATTCGAACT+AGG | + | chr1_2:56781146-56781165 | Msa0079060:five_prime_UTR | 40.0% | |
| TTTACCGGGAATTCGAACTA+GGG | + | chr1_2:56781147-56781166 | Msa0079060:five_prime_UTR | 40.0% | |
| ! | CTTGTGTTGATGAGATCAGA+AGG | + | chr1_2:56781620-56781639 | Msa0079060:five_prime_UTR | 40.0% |
| !!! | CTTTTGAAATTTGTGGAGGG+TGG | + | chr1_2:56781749-56781768 | Msa0079060:five_prime_UTR | 40.0% |
| TACAATCAAAAGGGCAGTGA+TGG | - | chr1_2:56781937-56781956 | None:intergenic | 40.0% | |
| GGCAAGACTTATTGATCCAA+TGG | + | chr1_2:56782086-56782105 | Msa0079060:intron | 40.0% | |
| !!! | GTGATTTTGCTGTTTAGTGG+TGG | + | chr1_2:56782317-56782336 | Msa0079060:CDS | 40.0% |
| TGAATATAATAGGCGGCAGA+AGG | - | chr1_2:56782391-56782410 | None:intergenic | 40.0% | |
| ! | CCGGCATTGAATATAATAGG+CGG | - | chr1_2:56782398-56782417 | None:intergenic | 40.0% |
| CCGCCTATTATATTCAATGC+CGG | + | chr1_2:56782395-56782414 | Msa0079060:CDS | 40.0% | |
| CGCCTATTATATTCAATGCC+GGG | + | chr1_2:56782396-56782415 | Msa0079060:CDS | 40.0% | |
| GATGTTCCAATTAAAAGGGG+AGG | + | chr1_2:56782494-56782513 | Msa0079060:intron | 40.0% | |
| GCTCTTTACGAACCATAAAC+CGG | + | chr1_2:56782530-56782549 | Msa0079060:intron | 40.0% | |
| !! | TTCATTTAGACGCCGGTTTA+TGG | - | chr1_2:56782545-56782564 | None:intergenic | 40.0% |
| ACAGATCTTCATTTAGACGC+CGG | - | chr1_2:56782552-56782571 | None:intergenic | 40.0% | |
| CAGAAAAGACTAATCTGCCA+TGG | - | chr1_2:56782906-56782925 | None:intergenic | 40.0% | |
| ! | ACAGTTGATGCTCATGTCAT+GGG | - | chr1_2:56782978-56782997 | None:intergenic | 40.0% |
| ! | TACAGTTGATGCTCATGTCA+TGG | - | chr1_2:56782979-56782998 | None:intergenic | 40.0% |
| TTCATTGTGCGTAAATGTGG+TGG | + | chr1_2:56783100-56783119 | Msa0079060:intron | 40.0% | |
| TCATTGTGCGTAAATGTGGT+GGG | + | chr1_2:56783101-56783120 | Msa0079060:intron | 40.0% | |
| AACTGTGATGCATTAGTTGC+TGG | - | chr1_2:56783732-56783751 | None:intergenic | 40.0% | |
| GACCTTATAAATGACGATGC+AGG | + | chr1_2:56783759-56783778 | Msa0079060:intron | 40.0% | |
| CACCTGCATCGTCATTTATA+AGG | - | chr1_2:56783764-56783783 | None:intergenic | 40.0% | |
| TGCATTGAAAAGAACCACTG+AGG | - | chr1_2:56783854-56783873 | None:intergenic | 40.0% | |
| ATGCAATTGAAGGGTTCAGT+TGG | - | chr1_2:56783897-56783916 | None:intergenic | 40.0% | |
| !! | GCTTGATGTGACTTGTGTTT+TGG | + | chr1_2:56784042-56784061 | Msa0079060:intron | 40.0% |
| ! | GTACATTGGCAGGTATTTTC+TGG | + | chr1_2:56784126-56784145 | Msa0079060:intron | 40.0% |
| GTATGCGAATAACCAAGTTC+TGG | + | chr1_2:56784262-56784281 | Msa0079060:intron | 40.0% | |
| AAATGAGCTCATCACTTAGC+TGG | + | chr1_2:56784430-56784449 | Msa0079060:intron | 40.0% | |
| TGTAATTCCACAAAGCTTGG+GGG | + | chr1_2:56784545-56784564 | Msa0079060:intron | 40.0% | |
| ACAAATACACAGAGAGACAC+GGG | - | chr1_2:56784718-56784737 | None:intergenic | 40.0% | |
| GACAAATACACAGAGAGACA+CGG | - | chr1_2:56784719-56784738 | None:intergenic | 40.0% | |
| GGTTGCTCTTATGATGCTAA+TGG | + | chr1_2:56784836-56784855 | Msa0079060:CDS | 40.0% | |
| ATGCAGTTAACCTATCTGAG+TGG | + | chr1_2:56784967-56784986 | Msa0079060:intron | 40.0% | |
| ATGCCCTGGACATTGAAAAA+TGG | + | chr1_2:56785247-56785266 | Msa0079060:CDS | 40.0% | |
| CAGTCAAACCAAGTAGTACA+AGG | - | chr1_2:56785421-56785440 | None:intergenic | 40.0% | |
| AGCTGCAAGTTCAGTATTGT+TGG | + | chr1_2:56785515-56785534 | Msa0079060:CDS | 40.0% | |
| GCTGCAAGTTCAGTATTGTT+GGG | + | chr1_2:56785516-56785535 | Msa0079060:CDS | 40.0% | |
| TTTCCTTCAGACAGCAAGTA+TGG | + | chr1_2:56785622-56785641 | Msa0079060:intron | 40.0% | |
| ! | CTTTTGCTTCCCCTCATTTT+AGG | + | chr1_2:56785714-56785733 | Msa0079060:intron | 40.0% |
| !! | TATGAGAGGTGCTGTTTCAA+TGG | + | chr1_2:56785759-56785778 | Msa0079060:CDS | 40.0% |
| AATGGCACTTGCGTATAATC+AGG | + | chr1_2:56785777-56785796 | Msa0079060:CDS | 40.0% | |
| !!! | GTACCACTGAGTTTTGGTTT+TGG | + | chr1_2:56785808-56785827 | Msa0079060:intron | 40.0% |
| TTATTGTTTGGCTGAAGCAG+TGG | - | chr1_2:56785850-56785869 | None:intergenic | 40.0% | |
| TTTGATGCAGTTCACCATGT+CGG | + | chr1_2:56785970-56785989 | Msa0079060:intron | 40.0% | |
| ! | ATTAGTTTCTCCTCACTGCA+CGG | + | chr1_2:56786109-56786128 | Msa0079060:intron | 40.0% |
| !! | GGTTTTGGTCCATGAAATGT+AGG | + | chr1_2:56786248-56786267 | Msa0079060:intron | 40.0% |
| !!! | CTGCTTGTGATTTTAGGATG+AGG | - | chr1_2:56786483-56786502 | None:intergenic | 40.0% |
| !! | GTCATGCTGCTTGTGATTTT+AGG | - | chr1_2:56786489-56786508 | None:intergenic | 40.0% |
| !!! | TTTTGGAGTAGTCGATTCTG+TGG | - | chr1_2:56786514-56786533 | None:intergenic | 40.0% |
| TCATTCATTGTCCCACTTCT+AGG | + | chr1_2:56786534-56786553 | Msa0079060:CDS | 40.0% | |
| AAGATCAGCTTCAGAATCTC+GGG | - | chr1_2:56786565-56786584 | None:intergenic | 40.0% | |
| CAAGATCAGCTTCAGAATCT+CGG | - | chr1_2:56786566-56786585 | None:intergenic | 40.0% | |
| !! | GATTCTGAAGCTGATCTTGA+AGG | + | chr1_2:56786567-56786586 | Msa0079060:CDS | 40.0% |
| !! | GAGTTGATAGTAAAGCACGA+AGG | - | chr1_2:56786617-56786636 | None:intergenic | 40.0% |
| AATCGATGAACAGTGTGAGT+TGG | - | chr1_2:56786639-56786658 | None:intergenic | 40.0% | |
| ! | CTCACACTGTTCATCGATTA+TGG | + | chr1_2:56786640-56786659 | Msa0079060:CDS | 40.0% |
| ! | TCATTCATGCGTCCTGTTTT+TGG | + | chr1_2:56786678-56786697 | Msa0079060:CDS | 40.0% |
| TGATTACCATTGCGTTCACT+TGG | - | chr1_2:56786738-56786757 | None:intergenic | 40.0% | |
| GTGAACGCAATGGTAATCAA+TGG | + | chr1_2:56786739-56786758 | Msa0079060:CDS | 40.0% | |
| GAACGCAATGGTAATCAATG+GGG | + | chr1_2:56786741-56786760 | Msa0079060:CDS | 40.0% | |
| CTATCTACACTCTCCAATGA+TGG | + | chr1_2:56787044-56787063 | Msa0079060:three_prime_UTR | 40.0% | |
| !!! | TGTTTGTTTTTGAGCTGCCG+TGG | - | chr1_2:56780931-56780950 | None:intergenic | 45.0% |
| ! | AGCAACGCGTGATGATGAAT+CGG | - | chr1_2:56780958-56780977 | None:intergenic | 45.0% |
| GGAGAGAGATGAGAAAGTTC+TGG | - | chr1_2:56781031-56781050 | None:intergenic | 45.0% | |
| CAATCCCTAGTTCGAATTCC+CGG | - | chr1_2:56781154-56781173 | None:intergenic | 45.0% | |
| ! | AACAGAAGCATGATCGGAAG+TGG | - | chr1_2:56781829-56781848 | None:intergenic | 45.0% |
| CTGTGTGCTTGTATTGTCCT+TGG | + | chr1_2:56781876-56781895 | Msa0079060:CDS | 45.0% | |
| ATCTTCTCGAGGAGAATCGA+TGG | + | chr1_2:56781901-56781920 | Msa0079060:CDS | 45.0% | |
| CGCAAGTATGTTGTCTACAC+TGG | + | chr1_2:56782045-56782064 | Msa0079060:intron | 45.0% | |
| ! | CACAAGCTTGTTTCCACCAT+TGG | - | chr1_2:56782105-56782124 | None:intergenic | 45.0% |
| ! | TCTTCTCAGGGTATTTGCAC+TGG | + | chr1_2:56782290-56782309 | Msa0079060:intron | 45.0% |
| !! | CTCAATGGCGGAGAAGTTTT+TGG | + | chr1_2:56782691-56782710 | Msa0079060:intron | 45.0% |
| TAGACATGTTCCTCTGCAGT+TGG | - | chr1_2:56783460-56783479 | None:intergenic | 45.0% | |
| GATATTGGGCCACTGGAAAT+CGG | + | chr1_2:56783540-56783559 | Msa0079060:CDS | 45.0% | |
| !! | AGATAATCGCCGATTTCCAG+TGG | - | chr1_2:56783552-56783571 | None:intergenic | 45.0% |
| CTGGAAATCGGCGATTATCT+AGG | + | chr1_2:56783552-56783571 | Msa0079060:CDS | 45.0% | |
| TGTGCAAACAGAGTCTGTTG+CGG | - | chr1_2:56783672-56783691 | None:intergenic | 45.0% | |
| AGACTCTGTTTGCACATTGC+AGG | + | chr1_2:56783676-56783695 | Msa0079060:CDS | 45.0% | |
| TGTGAATGATGCTACCTCAG+TGG | + | chr1_2:56783837-56783856 | Msa0079060:CDS | 45.0% | |
| TTTGTAGCAAGCACACTCCT+TGG | + | chr1_2:56783946-56783965 | Msa0079060:CDS | 45.0% | |
| !! | TGAGAGTGCTAGACAGAGAA+AGG | - | chr1_2:56783986-56784005 | None:intergenic | 45.0% |
| ATTTCTATCACCTCGCAGAC+AGG | + | chr1_2:56784073-56784092 | Msa0079060:intron | 45.0% | |
| !! | CTATCATTCTGGCTTGAAGC+AGG | - | chr1_2:56784385-56784404 | None:intergenic | 45.0% |
| CTGCTTCAAGCCAGAATGAT+AGG | + | chr1_2:56784383-56784402 | Msa0079060:intron | 45.0% | |
| GGTAAGAATGCCACTCAGAT+AGG | - | chr1_2:56784980-56784999 | None:intergenic | 45.0% | |
| GATCTCAGCAACAAAGGACA+AGG | - | chr1_2:56785202-56785221 | None:intergenic | 45.0% | |
| GGGCATCCATACCAACATAA+AGG | - | chr1_2:56785233-56785252 | None:intergenic | 45.0% | |
| TTATGTTGGTATGGATGCCC+TGG | + | chr1_2:56785233-56785252 | Msa0079060:CDS | 45.0% | |
| GAAGCAGTCCTTGTACTACT+TGG | + | chr1_2:56785410-56785429 | Msa0079060:intron | 45.0% | |
| TCCTATTCTTGTGCCACACT+TGG | + | chr1_2:56785465-56785484 | Msa0079060:intron | 45.0% | |
| ACCAAGTGTGGCACAAGAAT+AGG | - | chr1_2:56785469-56785488 | None:intergenic | 45.0% | |
| CTATAGATGTTCCAGGACTG+CGG | - | chr1_2:56785497-56785516 | None:intergenic | 45.0% | |
| CTTGCAGCTATAGATGTTCC+AGG | - | chr1_2:56785504-56785523 | None:intergenic | 45.0% | |
| AGACACTTGTCAGCATACCT+TGG | - | chr1_2:56785694-56785713 | None:intergenic | 45.0% | |
| ! | TAGGTTATCATTTGGTGGGC+TGG | + | chr1_2:56785733-56785752 | Msa0079060:intron | 45.0% |
| ! | TGAGCAGTACCACTGAGTTT+TGG | + | chr1_2:56785802-56785821 | Msa0079060:intron | 45.0% |
| TTGATGCAGTTCACCATGTC+GGG | + | chr1_2:56785971-56785990 | Msa0079060:intron | 45.0% | |
| GCTGAAAAGGACAACAGTGA+TGG | - | chr1_2:56786038-56786057 | None:intergenic | 45.0% | |
| ! | TGTTGTCCTTTTCAGCACAG+TGG | + | chr1_2:56786042-56786061 | Msa0079060:CDS | 45.0% |
| GTGCAGTGAGGAGAAACTAA+TGG | - | chr1_2:56786110-56786129 | None:intergenic | 45.0% | |
| ! | TGCTGACTAAGCCACTCATA+AGG | + | chr1_2:56786448-56786467 | Msa0079060:CDS | 45.0% |
| ! | GGTAGTAGAAGCCTTATGAG+TGG | - | chr1_2:56786462-56786481 | None:intergenic | 45.0% |
| TGTTCGGTCGGTGAATTTCA+TGG | - | chr1_2:56786593-56786612 | None:intergenic | 45.0% | |
| AGTAAAGCACGAAGGCTGTT+CGG | - | chr1_2:56786609-56786628 | None:intergenic | 45.0% | |
| !!! | TTCATGCGTCCTGTTTTTGG+TGG | + | chr1_2:56786681-56786700 | Msa0079060:CDS | 45.0% |
| AAACCTCTGCCACCAAAAAC+AGG | - | chr1_2:56786693-56786712 | None:intergenic | 45.0% | |
| !!! | GGTTTTGTTCCTGTAGAACC+TGG | + | chr1_2:56786708-56786727 | Msa0079060:CDS | 45.0% |
| !!! | ATTTATATTTATACATTTTA+AGG | + | chr1_2:56781375-56781394 | Msa0079060:intron | 5.0% |
| TGTCCTTGGTCATCTTCTCG+AGG | + | chr1_2:56781890-56781909 | Msa0079060:CDS | 50.0% | |
| TCTCCTCGAGAAGATGACCA+AGG | - | chr1_2:56781896-56781915 | None:intergenic | 50.0% | |
| GGTGGAAACAAGCTTGTGCA+TGG | + | chr1_2:56782107-56782126 | Msa0079060:intron | 50.0% | |
| AAAGAGGTAAGACGTACCCG+TGG | - | chr1_2:56783267-56783286 | None:intergenic | 50.0% | |
| GACGATGCAGGTGCTAAATC+AGG | + | chr1_2:56783771-56783790 | Msa0079060:intron | 50.0% | |
| AGGCATTTACCACAACGCCA+AGG | - | chr1_2:56783966-56783985 | None:intergenic | 50.0% | |
| AATCGTTCCCCCAAGCTTTG+TGG | - | chr1_2:56784555-56784574 | None:intergenic | 50.0% | |
| CGACAAGAGTTCAGGAGAGT+GGG | - | chr1_2:56784607-56784626 | None:intergenic | 50.0% | |
| CCACTCTCCTGAACTCTTGT+CGG | + | chr1_2:56784605-56784624 | Msa0079060:intron | 50.0% | |
| CACTCTCCTGAACTCTTGTC+GGG | + | chr1_2:56784606-56784625 | Msa0079060:intron | 50.0% | |
| TTCACACCCGACAAGAGTTC+AGG | - | chr1_2:56784615-56784634 | None:intergenic | 50.0% | |
| AAGAGCAACCTCACGATCTG+TGG | - | chr1_2:56784826-56784845 | None:intergenic | 50.0% | |
| GGCATACCTCTCCTATATGC+TGG | + | chr1_2:56784857-56784876 | Msa0079060:CDS | 50.0% | |
| ! | TCCTATATGCTGGCTGAGGT+AGG | + | chr1_2:56784867-56784886 | Msa0079060:intron | 50.0% |
| ACCTACCTCAGCCAGCATAT+AGG | - | chr1_2:56784871-56784890 | None:intergenic | 50.0% | |
| ACTGCGGAAGAAACCAAGTG+TGG | - | chr1_2:56785481-56785500 | None:intergenic | 50.0% | |
| !! | TGGCCATACTTGCTGTCTGA+AGG | - | chr1_2:56785628-56785647 | None:intergenic | 50.0% |
| TGATGCAGTTCACCATGTCG+GGG | + | chr1_2:56785972-56785991 | Msa0079060:intron | 50.0% | |
| TAGTTGAGTATGCCCCGACA+TGG | - | chr1_2:56785987-56786006 | None:intergenic | 50.0% | |
| ! | AAGGACAACAGTGATGGTGC+TGG | - | chr1_2:56786032-56786051 | None:intergenic | 50.0% |
| GGCTTACCACTGTGCTGAAA+AGG | - | chr1_2:56786051-56786070 | None:intergenic | 50.0% | |
| CTCGGGAATCTCCTAGAAGT+GGG | - | chr1_2:56786548-56786567 | None:intergenic | 50.0% | |
| TCTCGGGAATCTCCTAGAAG+TGG | - | chr1_2:56786549-56786568 | None:intergenic | 50.0% | |
| TCATCATCACGCGTTGCTCG+AGG | + | chr1_2:56780960-56780979 | Msa0079060:five_prime_UTR | 55.0% | |
| GAGGATGGATATTGGGCCAC+TGG | + | chr1_2:56783533-56783552 | Msa0079060:CDS | 55.0% | |
| AAGCACACTCCTTGGCGTTG+TGG | + | chr1_2:56783954-56783973 | Msa0079060:CDS | 55.0% | |
| CCGACAAGAGTTCAGGAGAG+TGG | - | chr1_2:56784608-56784627 | None:intergenic | 55.0% | |
| CCTCAGCCAGCATATAGGAG+AGG | - | chr1_2:56784866-56784885 | None:intergenic | 55.0% | |
| ! | CCTCTCCTATATGCTGGCTG+AGG | + | chr1_2:56784863-56784882 | Msa0079060:CDS | 55.0% |
| CTTGGTTTCTTCCGCAGTCC+TGG | + | chr1_2:56785483-56785502 | Msa0079060:intron | 55.0% | |
| !! | TGGTGGGCTGGTCTTATGAG+AGG | + | chr1_2:56785745-56785764 | Msa0079060:CDS | 55.0% |
| AAGCACGAAGGCTGTTCGGT+CGG | - | chr1_2:56786605-56786624 | None:intergenic | 55.0% | |
| !!! | CGTCCTGTTTTTGGTGGCAG+AGG | + | chr1_2:56786687-56786706 | Msa0079060:CDS | 55.0% |
| CTTGGTGAGCCAGGTTCTAC+AGG | - | chr1_2:56786720-56786739 | None:intergenic | 55.0% | |
| ! | TTGCGTTCACTTGGTGAGCC+AGG | - | chr1_2:56786729-56786748 | None:intergenic | 55.0% |
| GGCTCACCAAGTGAACGCAA+TGG | + | chr1_2:56786729-56786748 | Msa0079060:CDS | 55.0% | |
| GTGGAGGGTGGACGACATCA+TGG | + | chr1_2:56781761-56781780 | Msa0079060:exon | 60.0% | |
| ACTGAGCAGACCTGTCTGCG+AGG | - | chr1_2:56784086-56784105 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 56780820 | 56787091 | 56780820 | ID=Msa0079060;Name=Msa0079060 |
| chr1_2 | mRNA | 56780820 | 56787091 | 56780820 | ID=Msa0079060-mRNA-1;Parent=Msa0079060;Name=Msa0079060-mRNA-1;_AED=0.08;_eAED=0.08;_QI=596|1|1|1|0.92|0.86|15|324|541 |
| chr1_2 | exon | 56780820 | 56781250 | 56780820 | ID=Msa0079060-mRNA-1:exon:17819;Parent=Msa0079060-mRNA-1 |
| chr1_2 | exon | 56781615 | 56781953 | 56781615 | ID=Msa0079060-mRNA-1:exon:17820;Parent=Msa0079060-mRNA-1 |
| chr1_2 | exon | 56782299 | 56782417 | 56782299 | ID=Msa0079060-mRNA-1:exon:17821;Parent=Msa0079060-mRNA-1 |
| chr1_2 | exon | 56783172 | 56783269 | 56783172 | ID=Msa0079060-mRNA-1:exon:17822;Parent=Msa0079060-mRNA-1 |
| chr1_2 | exon | 56783514 | 56783573 | 56783514 | ID=Msa0079060-mRNA-1:exon:17823;Parent=Msa0079060-mRNA-1 |
| chr1_2 | exon | 56783651 | 56783697 | 56783651 | ID=Msa0079060-mRNA-1:exon:17824;Parent=Msa0079060-mRNA-1 |
| chr1_2 | exon | 56783781 | 56783975 | 56783781 | ID=Msa0079060-mRNA-1:exon:17825;Parent=Msa0079060-mRNA-1 |
| chr1_2 | exon | 56784091 | 56784137 | 56784091 | ID=Msa0079060-mRNA-1:exon:17826;Parent=Msa0079060-mRNA-1 |
| chr1_2 | exon | 56784818 | 56784884 | 56784818 | ID=Msa0079060-mRNA-1:exon:17827;Parent=Msa0079060-mRNA-1 |
| chr1_2 | exon | 56784973 | 56785073 | 56784973 | ID=Msa0079060-mRNA-1:exon:17828;Parent=Msa0079060-mRNA-1 |
| chr1_2 | exon | 56785185 | 56785286 | 56785185 | ID=Msa0079060-mRNA-1:exon:17829;Parent=Msa0079060-mRNA-1 |
| chr1_2 | exon | 56785500 | 56785638 | 56785500 | ID=Msa0079060-mRNA-1:exon:17830;Parent=Msa0079060-mRNA-1 |
| chr1_2 | exon | 56785736 | 56785798 | 56785736 | ID=Msa0079060-mRNA-1:exon:17831;Parent=Msa0079060-mRNA-1 |
| chr1_2 | exon | 56785980 | 56786063 | 56785980 | ID=Msa0079060-mRNA-1:exon:17832;Parent=Msa0079060-mRNA-1 |
| chr1_2 | exon | 56786438 | 56787091 | 56786438 | ID=Msa0079060-mRNA-1:exon:17833;Parent=Msa0079060-mRNA-1 |
| chr1_2 | five_prime_UTR | 56780820 | 56781250 | 56780820 | ID=Msa0079060-mRNA-1:five_prime_utr;Parent=Msa0079060-mRNA-1 |
| chr1_2 | five_prime_UTR | 56781615 | 56781779 | 56781615 | ID=Msa0079060-mRNA-1:five_prime_utr;Parent=Msa0079060-mRNA-1 |
| chr1_2 | CDS | 56781780 | 56781953 | 56781780 | ID=Msa0079060-mRNA-1:cds;Parent=Msa0079060-mRNA-1 |
| chr1_2 | CDS | 56782299 | 56782417 | 56782299 | ID=Msa0079060-mRNA-1:cds;Parent=Msa0079060-mRNA-1 |
| chr1_2 | CDS | 56783172 | 56783269 | 56783172 | ID=Msa0079060-mRNA-1:cds;Parent=Msa0079060-mRNA-1 |
| chr1_2 | CDS | 56783514 | 56783573 | 56783514 | ID=Msa0079060-mRNA-1:cds;Parent=Msa0079060-mRNA-1 |
| chr1_2 | CDS | 56783651 | 56783697 | 56783651 | ID=Msa0079060-mRNA-1:cds;Parent=Msa0079060-mRNA-1 |
| chr1_2 | CDS | 56783781 | 56783975 | 56783781 | ID=Msa0079060-mRNA-1:cds;Parent=Msa0079060-mRNA-1 |
| chr1_2 | CDS | 56784091 | 56784137 | 56784091 | ID=Msa0079060-mRNA-1:cds;Parent=Msa0079060-mRNA-1 |
| chr1_2 | CDS | 56784818 | 56784884 | 56784818 | ID=Msa0079060-mRNA-1:cds;Parent=Msa0079060-mRNA-1 |
| chr1_2 | CDS | 56784973 | 56785073 | 56784973 | ID=Msa0079060-mRNA-1:cds;Parent=Msa0079060-mRNA-1 |
| chr1_2 | CDS | 56785185 | 56785286 | 56785185 | ID=Msa0079060-mRNA-1:cds;Parent=Msa0079060-mRNA-1 |
| chr1_2 | CDS | 56785500 | 56785638 | 56785500 | ID=Msa0079060-mRNA-1:cds;Parent=Msa0079060-mRNA-1 |
| chr1_2 | CDS | 56785736 | 56785798 | 56785736 | ID=Msa0079060-mRNA-1:cds;Parent=Msa0079060-mRNA-1 |
| chr1_2 | CDS | 56785980 | 56786063 | 56785980 | ID=Msa0079060-mRNA-1:cds;Parent=Msa0079060-mRNA-1 |
| chr1_2 | CDS | 56786438 | 56786767 | 56786438 | ID=Msa0079060-mRNA-1:cds;Parent=Msa0079060-mRNA-1 |
| chr1_2 | three_prime_UTR | 56786768 | 56787091 | 56786768 | ID=Msa0079060-mRNA-1:three_prime_utr;Parent=Msa0079060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
