AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0081100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0081100 MtrunA17_Chr1g0193441 99.555 1124 5 0 1 1124 1 1124 0.0 2328
Msa0081100 MtrunA17_Chr2g0294361 52.305 1128 520 9 2 1121 29 1146 0.0 1195
Msa0081100 MtrunA17_Chr2g0303971 47.411 1120 546 14 7 1116 16 1102 0.0 1056
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0081100 AT1G09570.3 78.966 1122 235 1 1 1121 5 1126 0.0 1865
Msa0081100 AT1G09570.4 78.966 1122 235 1 1 1121 1 1122 0.0 1864
Msa0081100 AT1G09570.5 78.966 1122 235 1 1 1121 1 1122 0.0 1864
Msa0081100 AT1G09570.1 78.966 1122 235 1 1 1121 1 1122 0.0 1864
Msa0081100 AT1G09570.6 78.966 1122 235 1 1 1121 1 1122 0.0 1864
Msa0081100 AT1G09570.2 79.191 1014 210 1 109 1121 1 1014 0.0 1701
Msa0081100 AT5G35840.1 51.975 1114 518 9 9 1116 6 1108 0.0 1187
Msa0081100 AT2G18790.1 51.464 1127 521 9 9 1121 40 1154 0.0 1187
Msa0081100 AT4G16250.1 51.115 1121 524 8 8 1116 45 1153 0.0 1179
Msa0081100 AT2G18790.2 52.453 1060 478 9 9 1054 40 1087 0.0 1137
Msa0081100 AT4G18130.1 47.170 1113 527 18 24 1116 23 1094 0.0 1013

Find 328 sgRNAs with CRISPR-Local

Find 419 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATATTATATAGTATTTA+TGG 0.103098 1_2:-59621941 Msa0081100:five_prime_UTR
ATCTGTCCATCTTGTAAATT+TGG 0.118129 1_2:-59617674 Msa0081100:CDS
CAATGTAACTCTTATGTTTC+AGG 0.121337 1_2:-59616910 Msa0081100:three_prime_UTR
AAGGTATGCTTGTGAATTTC+TGG 0.149045 1_2:-59619927 Msa0081100:CDS
CTCACCATGGTCAGCATTTC+CGG 0.182471 1_2:+59620763 None:intergenic
CTTGTTCATTGCAAGACTTC+TGG 0.215857 1_2:-59620604 Msa0081100:CDS
AAGTTGAGAGGTTAAAATTT+TGG 0.216048 1_2:-59616968 Msa0081100:exon
TTCACTAGATCCATTATATT+GGG 0.226491 1_2:+59619767 None:intergenic
TTTCACTAGATCCATTATAT+TGG 0.244699 1_2:+59619766 None:intergenic
ATCAATCATATCCGTATCTT+TGG 0.245243 1_2:+59619316 None:intergenic
AACCAGATGTTTGGAAATAA+TGG 0.247267 1_2:-59617124 Msa0081100:CDS
CAAGAAGCTTTCGTTAATTT+CGG 0.247847 1_2:-59618520 Msa0081100:CDS
TTCAATTGCTTCCTTGGTTA+TGG 0.256368 1_2:-59620077 Msa0081100:CDS
CATGGATTCAATTGCTTCCT+TGG 0.263394 1_2:-59620083 Msa0081100:CDS
AACAGCAACAGTGCCTATTT+TGG 0.264602 1_2:-59619195 Msa0081100:CDS
TTCTTTCTAAAATCAATTCT+TGG 0.264850 1_2:-59616807 Msa0081100:three_prime_UTR
TTGTCTGATGCAGGGTTTCC+AGG 0.266630 1_2:-59619608 Msa0081100:CDS
GCTGCTGATGCTGCAGGTGC+AGG 0.269416 1_2:-59621788 Msa0081100:five_prime_UTR
ATATTCGGCACAGATGAATT+TGG 0.275063 1_2:-59618667 Msa0081100:CDS
TAGTTGCCATTTGCAGTATA+TGG 0.290132 1_2:-59620110 Msa0081100:CDS
AGCCAATCATCCAACAATTC+AGG 0.290374 1_2:-59621054 Msa0081100:CDS
GCTGCTGCTGCTGATGCTGC+AGG 0.292698 1_2:-59621794 Msa0081100:five_prime_UTR
CTTTGTGTGGTTCGACCTTA+AGG 0.295665 1_2:-59620141 Msa0081100:CDS
TCGAGTTCGGTGCGTGTCTC+TGG 0.306663 1_2:-59620937 Msa0081100:CDS
TATAGGAGGGATTAATTGAT+TGG 0.308265 1_2:+59618687 None:intergenic
CCGCAACATCATTCATTATT+CGG 0.310601 1_2:+59617842 None:intergenic
GGTTTGTTCCCTTTCCTCTA+AGG 0.315081 1_2:-59619946 Msa0081100:CDS
AGAAACAAGTTATGGATATT+AGG 0.318535 1_2:-59619719 Msa0081100:CDS
CGGTGAATAATCGCATAAAA+TGG 0.319261 1_2:+59620577 None:intergenic
CTTCCGGTTGGCGAAGCTAT+TGG 0.320481 1_2:-59619113 Msa0081100:CDS
GACAGGTCTAGAGCCATATC+TGG 0.327846 1_2:-59620299 Msa0081100:CDS
AGATAAGAGAGATAGCTTTA+TGG 0.328011 1_2:-59619676 Msa0081100:CDS
TCAACATCCACTGCCAAAAT+AGG 0.328387 1_2:+59619182 None:intergenic
CTAATTTGGGCAAGTGGGTT+TGG 0.332887 1_2:+59622145 None:intergenic
CTTATATGAGAAGGCAAATC+AGG 0.333168 1_2:-59618261 Msa0081100:CDS
GCGATTATTCACCGTGTTAC+CGG 0.333840 1_2:-59620568 Msa0081100:CDS
TCCCTGAATTGTTGGATGAT+TGG 0.338191 1_2:+59621052 None:intergenic
CTTGTAATCTCCTTCAATTC+GGG 0.339613 1_2:+59618726 None:intergenic
TCTTCTGAGCAGTTATATCT+TGG 0.340208 1_2:+59618767 None:intergenic
TCTTGATCTCCCTGAATTGT+TGG 0.341463 1_2:+59621044 None:intergenic
TTCCGAGTTGACAGGTCTTC+CGG 0.341506 1_2:-59619129 Msa0081100:CDS
CCTTGTAATCTCCTTCAATT+CGG 0.346124 1_2:+59618725 None:intergenic
GCATTAACTATCAAACTAAT+AGG 0.348807 1_2:+59618841 None:intergenic
AGCATAACACATGGTGGAAA+TGG 0.350939 1_2:-59617166 Msa0081100:CDS
TTGTTTGTCTCCCACCCAGC+TGG 0.355008 1_2:+59621837 None:intergenic
ATCACAAAGCCCCAATATAA+TGG 0.357439 1_2:-59619777 Msa0081100:CDS
GAAACAGAAAAGGTTCCTTT+TGG 0.358869 1_2:-59618466 Msa0081100:CDS
GGCAAGCAGATCCAGCCTTT+TGG 0.361823 1_2:-59620844 Msa0081100:CDS
CGTGTCTCTGGTTCAGTTGA+TGG 0.365933 1_2:-59620925 Msa0081100:CDS
ACCTTGCTTGGTTGGAGTTG+TGG 0.366742 1_2:-59621870 Msa0081100:five_prime_UTR
GCCCATTATTTCCAAACATC+TGG 0.367039 1_2:+59617122 None:intergenic
GATCGAAGGGATGCAGGAAT+TGG 0.372613 1_2:-59619252 Msa0081100:CDS
GTGATGGATAAAATGCTTCT+AGG 0.375567 1_2:-59618586 Msa0081100:CDS
TCCATTTGGTGTGGAATTGA+TGG 0.377120 1_2:+59617744 None:intergenic
CTGCTGATGCTGCAGGTGCA+GGG 0.377433 1_2:-59621787 Msa0081100:five_prime_UTR
GCAGCTATGATTAAGATAAC+TGG 0.378139 1_2:-59618625 Msa0081100:CDS
CAATTAATCCCTCCTATATT+CGG 0.379281 1_2:-59618682 Msa0081100:CDS
AATTCATCTGTGCCGAATAT+AGG 0.380738 1_2:+59618670 None:intergenic
TTGTTCATTGCAAGACTTCT+GGG 0.382407 1_2:-59620603 Msa0081100:CDS
TAATAAAGCGATGACTGGTT+TGG 0.382757 1_2:-59618488 Msa0081100:CDS
TTTGTGTGGTTCGACCTTAA+GGG 0.388633 1_2:-59620140 Msa0081100:CDS
ACTCTAACTAAAGAACAGTT+AGG 0.392636 1_2:-59617700 Msa0081100:CDS
CACGGGTCTAAGACGGATTC+CGG 0.396350 1_2:-59618865 Msa0081100:CDS
AATTCACAAGCATACCTTAG+AGG 0.402330 1_2:+59619932 None:intergenic
ATCTTGTAAATTTGGAGCTC+AGG 0.402723 1_2:-59617666 Msa0081100:intron
CAAATCAGGAATCCTTTGTC+TGG 0.404340 1_2:-59618247 Msa0081100:CDS
CCACACAAAGTCAAATCAAA+TGG 0.404372 1_2:+59620154 None:intergenic
GCAACTATGTGGGGCCCTTA+AGG 0.409373 1_2:+59620126 None:intergenic
CCTCTTTGTAATTAAAAGAA+AGG 0.412093 1_2:+59616782 None:intergenic
GATGCGGAGGGCCTAGTTAC+CGG 0.412749 1_2:-59618385 Msa0081100:CDS
GTAAGCTGTTGTTACTTTGT+TGG 0.419763 1_2:+59620885 None:intergenic
TCTTAGACTTCAGCAGGTCT+TGG 0.422081 1_2:-59617785 Msa0081100:CDS
TTGAGTGATGTTTGAGAAGA+AGG 0.423768 1_2:-59622288 None:intergenic
CATTCCTTTCCATCTTCACA+TGG 0.425758 1_2:-59621981 Msa0081100:five_prime_UTR
TGTGGAGTAGAGGCTCCAGC+TGG 0.426178 1_2:-59621852 Msa0081100:five_prime_UTR
ATAGGAGGGATTAATTGATT+GGG 0.426264 1_2:+59618688 None:intergenic
TGTAACGCTTGTTGCAGCTC+CGG 0.426311 1_2:+59618334 None:intergenic
GACCACCCTGCCCTTGGCAT+TGG 0.429364 1_2:-59620718 Msa0081100:CDS
TTCCTTTGACTACTCGAGTT+CGG 0.429419 1_2:-59620950 Msa0081100:CDS
GCAGTGCTGAACCAGATGTT+TGG 0.433058 1_2:-59617133 Msa0081100:CDS
GGATAGTGCAAACCCAGATA+TGG 0.433533 1_2:+59620286 None:intergenic
GATGCTTAATCTGGCACTGC+AGG 0.433909 1_2:-59619039 Msa0081100:CDS
TGAATTATACTGACCTTGCT+TGG 0.435042 1_2:-59621882 Msa0081100:five_prime_UTR
GTTCGATATTTAAAAGAAGC+TGG 0.435439 1_2:-59617034 Msa0081100:CDS
GACAAATTCACCCGAATTGA+AGG 0.436659 1_2:-59618736 Msa0081100:CDS
CTTCTGAGCAGTTATATCTT+GGG 0.437606 1_2:+59618768 None:intergenic
ACCAGATGTTTGGAAATAAT+GGG 0.438607 1_2:-59617123 Msa0081100:CDS
AGTCAAGAAGATGCTTAATC+TGG 0.442145 1_2:-59619048 Msa0081100:CDS
ATAACAACCTGACCTCCATT+TGG 0.442580 1_2:+59617730 None:intergenic
GTCGGTGACCACCCTGCCCT+TGG 0.448616 1_2:-59620724 Msa0081100:CDS
TCCATCAATTCCACACCAAA+TGG 0.449632 1_2:-59617745 Msa0081100:CDS
TGCCTCTTTGTATTGTATTG+AGG 0.450361 1_2:+59620863 None:intergenic
ATATCTGGGTTTGCACTATC+CGG 0.451879 1_2:-59620284 Msa0081100:CDS
CTCTTAGTCAAGTCATGAAT+AGG 0.453661 1_2:-59617882 Msa0081100:CDS
AAAGCATGAACCTGGCGAAC+AGG 0.454684 1_2:-59619471 Msa0081100:CDS
CGAAAAGCTTGACTGAGAAT+AGG 0.456543 1_2:+59616834 None:intergenic
CTACCATCATCCTGTTCGCC+AGG 0.462148 1_2:+59619461 None:intergenic
TATTTCTTTGTTCACATGGA+TGG 0.464909 1_2:+59619892 None:intergenic
TAGTTAATGCGTGTGCAAGC+AGG 0.464965 1_2:-59618828 Msa0081100:CDS
AAATTTCACGAGGATGATCA+TGG 0.465494 1_2:-59620346 Msa0081100:CDS
TGTCTGATGCAGGGTTTCCA+GGG 0.465712 1_2:-59619607 Msa0081100:CDS
ATCAAAATTTCCGAGTTGAC+AGG 0.466192 1_2:-59619137 Msa0081100:CDS
TAACTGTTCTTTAGTTAGAG+TGG 0.466312 1_2:+59617702 None:intergenic
GTAAGTAGTACAAGAAAGGA+AGG 0.470059 1_2:+59621715 None:intergenic
TGTTAGCCATATACTGCAAA+TGG 0.471732 1_2:+59620104 None:intergenic
GACTGGTTTGGAAACAGAAA+AGG 0.472692 1_2:-59618476 Msa0081100:CDS
GCAGTCATGGGAACTTCATA+AGG 0.472727 1_2:+59620514 None:intergenic
GTTGTTACTTTGTTGGACCT+TGG 0.473773 1_2:+59620892 None:intergenic
AAGAGTAAGTAGTACAAGAA+AGG 0.474869 1_2:+59621711 None:intergenic
TTATACTGACCTTGCTTGGT+TGG 0.475973 1_2:-59621878 Msa0081100:five_prime_UTR
ACGGATAACTTGTCTGATGC+AGG 0.477478 1_2:-59619617 Msa0081100:CDS
CACACCAGCATCCATCTACT+TGG 0.477980 1_2:+59622082 None:intergenic
CAAGCATACCTTAGAGGAAA+GGG 0.479218 1_2:+59619938 None:intergenic
ACCATGGAAAGACTTTGAAA+TGG 0.480694 1_2:-59619378 Msa0081100:CDS
TTTCCAATAGCTTCGCCAAC+CGG 0.480820 1_2:+59619110 None:intergenic
AAGTTCAACAGATAGAATAA+AGG 0.481758 1_2:+59617003 None:intergenic
TTCCACACCAAATGGAGGTC+AGG 0.481947 1_2:-59617737 Msa0081100:CDS
GATCTAGACAGCATCATTGA+TGG 0.482806 1_2:-59618109 Msa0081100:CDS
TAACAAGTAACTAACCTTGT+TGG 0.483286 1_2:+59621664 None:intergenic
GCATAACACATGGTGGAAAT+GGG 0.484009 1_2:-59617165 Msa0081100:CDS
AAATATCTAATTTGGGCAAG+TGG 0.485059 1_2:+59622139 None:intergenic
GCAGGGTGGTCACCGACACT+AGG 0.485484 1_2:+59620730 None:intergenic
CAGTGACGAGTGAGATGGTT+CGG 0.486902 1_2:-59619226 Msa0081100:CDS
CCATTTGATTTGACTTTGTG+TGG 0.488925 1_2:-59620154 Msa0081100:CDS
TTGAACTAACAGGTTATGAC+AGG 0.493092 1_2:-59620381 Msa0081100:CDS
ATTCACTCTGCATGAGGTAC+TGG 0.493254 1_2:-59617911 Msa0081100:CDS
CTATCAAAGTGTTGGTCTGT+TGG 0.493336 1_2:-59622049 Msa0081100:five_prime_UTR
CATCAGCAGCAGCAGCAAGC+TGG 0.493550 1_2:+59621801 None:intergenic
AACAGAAGACCCCGGTAACT+AGG 0.493774 1_2:+59618374 None:intergenic
TTCCTTTCCATCTTCACATG+GGG 0.494340 1_2:-59621979 Msa0081100:five_prime_UTR
GTACTTAATAAAGCGATGAC+TGG 0.494971 1_2:-59618493 Msa0081100:CDS
GAGTGCTTCTGCGCTACAAA+AGG 0.496096 1_2:-59620665 Msa0081100:CDS
AAAGCCTTGAATGATGATCT+TGG 0.496392 1_2:+59619428 None:intergenic
GCCAATCATCCAACAATTCA+GGG 0.496752 1_2:-59621053 Msa0081100:CDS
GGCAGTGGATGTTGATGGGA+TGG 0.498676 1_2:-59619174 Msa0081100:CDS
TCAGTTCCAATGCCAAGGGC+AGG 0.498965 1_2:+59620712 None:intergenic
CACACAAAGTCAAATCAAAT+GGG 0.498967 1_2:+59620155 None:intergenic
GTATGGTAGTCACACACAAT+TGG 0.499550 1_2:-59621760 Msa0081100:five_prime_UTR
AATGTTGGAGAATACTGAGT+TGG 0.501979 1_2:-59618206 Msa0081100:CDS
GGAACTTCATAAGGCTTCAC+TGG 0.502178 1_2:+59620523 None:intergenic
GCTTTGTGATACAATACCTA+AGG 0.505507 1_2:+59619790 None:intergenic
TCCTAGCCTTCACAACTTCG+AGG 0.505957 1_2:+59619405 None:intergenic
ATGCGGAGGGCCTAGTTACC+GGG 0.508160 1_2:-59618384 Msa0081100:CDS
TGAGAGCGGTTTGTTCAGAT+AGG 0.509064 1_2:+59618302 None:intergenic
CTGATGCGAGATGCACCCTT+AGG 0.509221 1_2:-59619806 Msa0081100:CDS
GTCAATGACAGCGATGAAGA+TGG 0.509661 1_2:-59620046 Msa0081100:CDS
TAATGCGCCTGCTGCAGTCA+TGG 0.511154 1_2:+59620501 None:intergenic
AGAAAGGAAGGTATTAGCTA+AGG 0.511855 1_2:+59621727 None:intergenic
ACAACTTTCTACTGATGTGT+AGG 0.512153 1_2:+59617077 None:intergenic
CTAGCAAGCAACCAAAAGGC+TGG 0.512234 1_2:+59620833 None:intergenic
TTTGAAGATCGAAGGGATGC+AGG 0.512663 1_2:-59619258 Msa0081100:CDS
ATTCCTTTCCATCTTCACAT+GGG 0.512888 1_2:-59621980 Msa0081100:five_prime_UTR
TCCATTTCAAAGTCTTTCCA+TGG 0.514245 1_2:+59619377 None:intergenic
GCATCCAAGATCATCATTCA+AGG 0.514409 1_2:-59619432 Msa0081100:CDS
ATGTTGGAGAATACTGAGTT+GGG 0.514837 1_2:-59618205 Msa0081100:CDS
GTAACGCTTGTTGCAGCTCC+GGG 0.517155 1_2:+59618335 None:intergenic
GTGATGTTTGAGAAGAAGGA+AGG 0.517404 1_2:-59622284 None:intergenic
ATTCTATTTCTTTGTTCACA+TGG 0.517827 1_2:+59619888 None:intergenic
CTAAATGATTTGAAGATCGA+AGG 0.518060 1_2:-59619266 Msa0081100:CDS
GATGCTGCAGGTGCAGGGTA+TGG 0.518395 1_2:-59621782 Msa0081100:five_prime_UTR
TGCCTAGTGGCAGCATGGAA+AGG 0.518888 1_2:-59620432 Msa0081100:CDS
AACTATCAAACTAATAGGAC+CGG 0.519104 1_2:+59618846 None:intergenic
TCAAACCAGTCGAATCTGTA+TGG 0.519941 1_2:+59619642 None:intergenic
TATGATTGATTTAAACTCAA+AGG 0.520564 1_2:-59619303 Msa0081100:CDS
GAAGTTCCCATGACTGCAGC+AGG 0.521612 1_2:-59620508 Msa0081100:CDS
CACTGCTGCAGAAATCCGAT+GGG 0.522593 1_2:-59619501 Msa0081100:CDS
TGTTGTATAGAAACAAGTTA+TGG 0.524102 1_2:-59619727 Msa0081100:CDS
CACACAATTGTGACTGAGAA+GGG 0.526633 1_2:+59621906 None:intergenic
AATATCTAATTTGGGCAAGT+GGG 0.526680 1_2:+59622140 None:intergenic
CATGCTTTGCACCACCCCAT+CGG 0.527680 1_2:+59619486 None:intergenic
ACATTTACTCACACTTGTTG+AGG 0.528125 1_2:-59619087 Msa0081100:CDS
GAGTAGAGGCTCCAGCTGGG+TGG 0.530375 1_2:-59621848 Msa0081100:five_prime_UTR
ACAACAGTGTCTGCGTGCGC+AGG 0.530607 1_2:+59619837 None:intergenic
TCGTTAAGTTTAAGAGCCCC+TGG 0.531192 1_2:+59619590 None:intergenic
AGCTGGGTGGGAGACAAACA+AGG 0.531816 1_2:-59621835 Msa0081100:five_prime_UTR
GCCTGGGGAATATCTGTGGC+CGG 0.531960 1_2:+59620265 None:intergenic
AAAGCTAGCAAGCAACCAAA+AGG 0.534264 1_2:+59620829 None:intergenic
GATGTTGATGGGATGGTCAA+TGG 0.534907 1_2:-59619167 Msa0081100:CDS
TAGGAGGGATTAATTGATTG+GGG 0.535454 1_2:+59618689 None:intergenic
TACTGCAAATGGCAACTATG+TGG 0.535932 1_2:+59620115 None:intergenic
TGATAGTCTTAGACTTCAGC+AGG 0.536352 1_2:-59617791 Msa0081100:CDS
GGCTTTCCTCGAAGTTGTGA+AGG 0.538027 1_2:-59619411 Msa0081100:CDS
CCGAATTGAAGGAGATTACA+AGG 0.539935 1_2:-59618725 Msa0081100:CDS
TCCTCGAAGTTGTGAAGGCT+AGG 0.540137 1_2:-59619406 Msa0081100:CDS
TAGCAAAATTCTTGATGACT+CGG 0.540197 1_2:-59618131 Msa0081100:CDS
ACAAAAGGCACTAGGATTTG+CGG 0.541535 1_2:-59620650 Msa0081100:CDS
ATTGCTGAGGTAACAAAGAC+AGG 0.541815 1_2:-59620316 Msa0081100:CDS
AGTTAATGCGTGTGCAAGCA+GGG 0.542610 1_2:-59618827 Msa0081100:CDS
ACACTGCTGCAGAAATCCGA+TGG 0.543900 1_2:-59619502 Msa0081100:CDS
AAATCAGGAATCCTTTGTCT+GGG 0.547598 1_2:-59618246 Msa0081100:CDS
ATGGAAGCGAGAGGAGGTGA+TGG 0.547827 1_2:-59618602 Msa0081100:CDS
ATCTTTGCCTAGTGGCAGCA+TGG 0.548173 1_2:-59620437 Msa0081100:CDS
ATCGCGATGGAAACCTTGTA+TGG 0.549194 1_2:-59617814 Msa0081100:CDS
TTATGTCAGTTCCAATGCCA+AGG 0.550411 1_2:+59620707 None:intergenic
GTCTGATGCAGGGTTTCCAG+GGG 0.550826 1_2:-59619606 Msa0081100:CDS
CAGGGTGGTCACCGACACTA+GGG 0.554292 1_2:+59620731 None:intergenic
GAAAGGAAGGTATTAGCTAA+GGG 0.554422 1_2:+59621728 None:intergenic
AAACTTAACGATACTGTATG+TGG 0.555127 1_2:-59619578 Msa0081100:CDS
AATTTGGCTGGTGTTGTGAG+TGG 0.555569 1_2:-59618651 Msa0081100:CDS
ATATAGTATTTATGGCATGA+TGG 0.555780 1_2:-59621933 Msa0081100:five_prime_UTR
AGAGGAAAGGGAACAAACCT+TGG 0.558190 1_2:+59619950 None:intergenic
AACCGGAAGACCTGTCAACT+CGG 0.559298 1_2:+59619127 None:intergenic
TCTCTTATCTGAGGTTCACT+CGG 0.559883 1_2:+59619689 None:intergenic
AGCACCAAGTAGATGGATGC+TGG 0.559888 1_2:-59622086 Msa0081100:five_prime_UTR
TTGATGGGATGGTCAATGGT+TGG 0.560226 1_2:-59619163 Msa0081100:CDS
TCATCTGTGCCGAATATAGG+AGG 0.560999 1_2:+59618673 None:intergenic
TGGGAGACAAACAAGGGCGG+TGG 0.561672 1_2:-59621828 Msa0081100:five_prime_UTR
TGGTTGGAGTTGTGGAGTAG+AGG 0.562362 1_2:-59621862 Msa0081100:five_prime_UTR
TCGGCACAGATGAATTTGGC+TGG 0.562466 1_2:-59618663 Msa0081100:CDS
CAGAAGTCTTGCAATGAACA+AGG 0.562779 1_2:+59620605 None:intergenic
TTTGCAGTATATGGCTAACA+TGG 0.565032 1_2:-59620101 Msa0081100:CDS
ACTGCAAATGGCAACTATGT+GGG 0.566316 1_2:+59620116 None:intergenic
TCTTGCAATGAACAAGGATA+GGG 0.567253 1_2:+59620611 None:intergenic
GAGAAACGCATCCAAAGATA+CGG 0.567684 1_2:-59619327 Msa0081100:CDS
GTCTTGCAATGAACAAGGAT+AGG 0.570149 1_2:+59620610 None:intergenic
TACTTTCAGTCTCTTGAGAG+CGG 0.571332 1_2:+59618288 None:intergenic
CCGAATAATGAATGATGTTG+CGG 0.572031 1_2:-59617842 Msa0081100:CDS
TAAATGATTTGAAGATCGAA+GGG 0.574470 1_2:-59619265 Msa0081100:CDS
GATCTTCATGAAAATGTAGT+GGG 0.575911 1_2:-59618805 Msa0081100:CDS
GGATAAAATGCTTCTAGGAG+AGG 0.576307 1_2:-59618581 Msa0081100:CDS
AGATTCGACTGGTTTGAGTA+CGG 0.576797 1_2:-59619636 Msa0081100:CDS
AATGCGCCTGCTGCAGTCAT+GGG 0.577517 1_2:+59620502 None:intergenic
GAACCTGGCGAACAGGATGA+TGG 0.577808 1_2:-59619464 Msa0081100:CDS
CGCAGCCTGGGGAATATCTG+TGG 0.577872 1_2:+59620261 None:intergenic
AGCCTTTCCATGCTGCCACT+AGG 0.578839 1_2:+59620430 None:intergenic
TCCACAACTCCAACCAAGCA+AGG 0.579175 1_2:+59621869 None:intergenic
AGAAGAAGGAAGGAAAGTCA+AGG 0.579635 1_2:-59622274 Msa0081100:five_prime_UTR
GGAAAGGCTTTGCGATACAA+TGG 0.579896 1_2:-59620416 Msa0081100:CDS
TCACTAGATCCATTATATTG+GGG 0.580469 1_2:+59619768 None:intergenic
GAATTGTTGGATGATTGGCT+AGG 0.581778 1_2:+59621057 None:intergenic
TGGATCTAGTGAAATGTGAT+GGG 0.582037 1_2:-59619757 Msa0081100:CDS
AAAGTCAATGATCAAACTAC+CGG 0.582203 1_2:+59620549 None:intergenic
AATTTCACGAGGATGATCAT+GGG 0.582420 1_2:-59620345 Msa0081100:CDS
TCTAAGACTATCACCATACA+AGG 0.582514 1_2:+59617801 None:intergenic
TGAGCTCCAAATTTACAAGA+TGG 0.582870 1_2:+59617668 None:intergenic
ATCTAGACAGCATCATTGAT+GGG 0.584630 1_2:-59618108 Msa0081100:intron
GTGGAGTAGAGGCTCCAGCT+GGG 0.585532 1_2:-59621851 Msa0081100:five_prime_UTR
AAGTAACTAACCTTGTTGGA+AGG 0.585743 1_2:+59621668 None:intergenic
CAGTTCCAATGCCAAGGGCA+GGG 0.587285 1_2:+59620713 None:intergenic
TCCTTTCCATCTTCACATGG+GGG 0.588053 1_2:-59621978 Msa0081100:five_prime_UTR
TTCCGAGAGAGAAAACCAAA+AGG 0.588084 1_2:+59618451 None:intergenic
AGTAGAGGCTCCAGCTGGGT+GGG 0.588547 1_2:-59621847 Msa0081100:five_prime_UTR
ATGGATCTAGTGAAATGTGA+TGG 0.589258 1_2:-59619758 Msa0081100:CDS
GCACACAATTGTGACTGAGA+AGG 0.589804 1_2:+59621905 None:intergenic
ACAGGTCTAGAGCCATATCT+GGG 0.589991 1_2:-59620298 Msa0081100:CDS
AAGTATTAACTTATATGAGA+AGG 0.590694 1_2:-59618270 Msa0081100:CDS
CAGGTACTTGGATCTCGAGA+TGG 0.590762 1_2:-59617938 Msa0081100:CDS
CTCTAACTAAAGAACAGTTA+GGG 0.590954 1_2:-59617699 Msa0081100:CDS
TACCTCAATACAATACAAAG+AGG 0.592329 1_2:-59620865 Msa0081100:CDS
CGTGACAATCAACTATCATA+CGG 0.592496 1_2:+59620212 None:intergenic
GGAGATCAAGAAATAGTGCT+AGG 0.595358 1_2:-59621032 Msa0081100:CDS
CGGATAACTTGTCTGATGCA+GGG 0.597055 1_2:-59619616 Msa0081100:CDS
CAAAACACACGGGTCTAAGA+CGG 0.599832 1_2:-59618872 Msa0081100:CDS
CTGCAAATGGCAACTATGTG+GGG 0.600674 1_2:+59620117 None:intergenic
GAGTTGACAGGTCTTCCGGT+TGG 0.600729 1_2:-59619125 Msa0081100:CDS
TAACGATACTGTATGTGGAA+TGG 0.601775 1_2:-59619573 Msa0081100:CDS
TTGTCACGCAAAACATGTGA+AGG 0.602272 1_2:-59620197 Msa0081100:CDS
GGTGGTGCAAAGCATGAACC+TGG 0.605534 1_2:-59619479 Msa0081100:CDS
ACAAGCATACCTTAGAGGAA+AGG 0.605696 1_2:+59619937 None:intergenic
TCCGGCCACAGATATTCCCC+AGG 0.606542 1_2:-59620266 Msa0081100:CDS
AACCTGACCTCCATTTGGTG+TGG 0.607257 1_2:+59617735 None:intergenic
GGATCTTCATGAAAATGTAG+TGG 0.607404 1_2:-59618806 Msa0081100:CDS
AACTGGATGGAAGCGAGAGG+AGG 0.609754 1_2:-59618608 Msa0081100:CDS
CACCGAACTCGAGTAGTCAA+AGG 0.611550 1_2:+59620948 None:intergenic
TATGTCAGTTCCAATGCCAA+GGG 0.612549 1_2:+59620708 None:intergenic
GAGTACCATACAGATTCGAC+TGG 0.614505 1_2:-59619647 Msa0081100:CDS
GAGTAAGAAAATAGATGCGG+AGG 0.615962 1_2:-59618398 Msa0081100:CDS
ATTCATGACTTGACTAAGAG+AGG 0.616488 1_2:+59617885 None:intergenic
CATAACACATGGTGGAAATG+GGG 0.617721 1_2:-59617164 Msa0081100:CDS
TGCATACAGTGAGAATGCAC+CGG 0.619615 1_2:-59620782 Msa0081100:CDS
CAATTCGAGATCAAAACACA+CGG 0.619684 1_2:-59618883 Msa0081100:CDS
GCTTGACTGAGAATAGGTGA+AGG 0.622290 1_2:+59616840 None:intergenic
AGTCGAATCTGTATGGTACT+CGG 0.625552 1_2:+59619649 None:intergenic
TGATCAAACTACCGGTAACA+CGG 0.628461 1_2:+59620557 None:intergenic
TAATGGGCTAGAATCAGAAG+AGG 0.628885 1_2:-59617107 Msa0081100:CDS
AACTGCTCAGAAGACAGTCA+TGG 0.634261 1_2:-59618758 Msa0081100:CDS
CTGGCGAACAGGATGATGGT+AGG 0.635088 1_2:-59619460 Msa0081100:CDS
CTTTGTGATACAATACCTAA+GGG 0.635992 1_2:+59619791 None:intergenic
AAGTTGTTAAAGCTTATGAA+CGG 0.636814 1_2:-59617061 Msa0081100:CDS
AAAGCTATCTCTCTTATCTG+AGG 0.636818 1_2:+59619680 None:intergenic
ATGCTTAATCTGGCACTGCA+GGG 0.637194 1_2:-59619038 Msa0081100:intron
GGAAGCAGTGACGAGTGAGA+TGG 0.638270 1_2:-59619231 Msa0081100:CDS
ATCAATTCCACACCAAATGG+AGG 0.638917 1_2:-59617742 Msa0081100:CDS
AGTCATGCTGTCCCTAGTGT+CGG 0.639026 1_2:-59620742 Msa0081100:CDS
GGCTGAATTCACTCTGCATG+AGG 0.639969 1_2:-59617917 Msa0081100:CDS
GCAGCAGCCCAAAAGTTGAG+AGG 0.640874 1_2:-59616980 Msa0081100:CDS
AACACATGGTGGAAATGGGG+TGG 0.641790 1_2:-59617161 Msa0081100:CDS
TCTGCGCTACAAAAGGCACT+AGG 0.643845 1_2:-59620658 Msa0081100:CDS
AACAGGTTATGACAGGGTGA+TGG 0.647543 1_2:-59620374 Msa0081100:CDS
TTTAGACGAGAAAACGTGCA+AGG 0.650029 1_2:-59620809 Msa0081100:CDS
TTGTGTAGCATAACACATGG+TGG 0.650607 1_2:-59617172 Msa0081100:intron
TGCAGGTGCAGGGTATGGTA+TGG 0.652960 1_2:-59621777 Msa0081100:five_prime_UTR
GAAAACACAATCCCAGACAA+AGG 0.654982 1_2:+59618235 None:intergenic
AGTAAGAAAATAGATGCGGA+GGG 0.655141 1_2:-59618397 Msa0081100:CDS
CATCTGTGCCGAATATAGGA+GGG 0.657662 1_2:+59618674 None:intergenic
AGATTGCAATCTTTGCCTAG+TGG 0.660880 1_2:-59620445 Msa0081100:CDS
GGGTGGGAGACAAACAAGGG+CGG 0.665089 1_2:-59621831 Msa0081100:five_prime_UTR
ATTTCACGAGGATGATCATG+GGG 0.665241 1_2:-59620344 Msa0081100:CDS
ACTTAATTAAACAACAAACA+TGG 0.667557 1_2:+59622229 None:intergenic
GACTACTACAGCCATAACCA+AGG 0.668280 1_2:+59620066 None:intergenic
GAGTGAATCTATCAAAGTGT+TGG 0.671101 1_2:-59622057 Msa0081100:five_prime_UTR
TGAACTAACAGGTTATGACA+GGG 0.672771 1_2:-59620380 Msa0081100:CDS
CTATGATTAAGATAACTGGA+TGG 0.673061 1_2:-59618621 Msa0081100:CDS
GCTGGGTGGGAGACAAACAA+GGG 0.677003 1_2:-59621834 Msa0081100:five_prime_UTR
AATGGGCTAGAATCAGAAGA+GGG 0.681452 1_2:-59617106 Msa0081100:CDS
TCACGAGGATGATCATGGGG+AGG 0.681759 1_2:-59620341 Msa0081100:CDS
AAAGGCACTAGGATTTGCGG+AGG 0.682229 1_2:-59620647 Msa0081100:CDS
TGTGAGTAAGAAAATAGATG+CGG 0.682570 1_2:-59618401 Msa0081100:CDS
GTGATAAAATGTCGACCACG+AGG 0.683227 1_2:-59621080 Msa0081100:exon
TGTTGCGGAGCATATCGCGA+TGG 0.683769 1_2:-59617827 Msa0081100:CDS
TTCCAATGCCAAGGGCAGGG+TGG 0.684064 1_2:+59620716 None:intergenic
GGATGATTGGCTAGGCCTCG+TGG 0.686099 1_2:+59621065 None:intergenic
TGAAGGCTAGGAGCATACCA+TGG 0.687288 1_2:-59619394 Msa0081100:CDS
GCTGCAGAAATCCGATGGGG+TGG 0.690305 1_2:-59619497 Msa0081100:CDS
TGCGGAGGGCCTAGTTACCG+GGG 0.690803 1_2:-59618383 Msa0081100:CDS
TAGTATTTATGGCATGATGG+CGG 0.701859 1_2:-59621930 Msa0081100:five_prime_UTR
GATAACTGGATGGAAGCGAG+AGG 0.707153 1_2:-59618611 Msa0081100:CDS
TTTGTCATAACACTACACCA+AGG 0.707681 1_2:-59619967 Msa0081100:CDS
TTGATGGAGAGCATCAACCA+AGG 0.713680 1_2:-59620909 Msa0081100:CDS
AGGGACAGCATGACTCACCA+TGG 0.719846 1_2:+59620750 None:intergenic
TAGCGCAGAAGCACTCGGTG+CGG 0.723772 1_2:+59620672 None:intergenic
AATTCGAGATCAAAACACAC+GGG 0.726452 1_2:-59618882 Msa0081100:CDS
TGCACCGGAAATGCTGACCA+TGG 0.728482 1_2:-59620767 Msa0081100:CDS
GGATCTAGTGAAATGTGATG+GGG 0.730307 1_2:-59619756 Msa0081100:CDS
TCATGAATAGGAGTAACACA+AGG 0.732967 1_2:-59617870 Msa0081100:CDS
GATGGCTTATAAATTTCACG+AGG 0.753601 1_2:-59620356 Msa0081100:CDS
TCATGGGGAGGTGATTGCTG+AGG 0.754373 1_2:-59620329 Msa0081100:CDS
ACTGCTGCAGAAATCCGATG+GGG 0.765290 1_2:-59619500 Msa0081100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAGATAAGAAAAAAA+AGG + chr1_2:59616882-59616901 None:intergenic 10.0%
!!! TTTTTTTTCTTATCTATTTT+AGG - chr1_2:59616881-59616900 Msa0081100:three_prime_UTR 10.0%
!! TGTAAAAAAATATCTAATTT+GGG + chr1_2:59616927-59616946 None:intergenic 10.0%
!! ATGTAAAAAAATATCTAATT+TGG + chr1_2:59616928-59616947 None:intergenic 10.0%
!! GATATATTATATAGTATTTA+TGG - chr1_2:59617115-59617134 Msa0081100:CDS 10.0%
!! AATAACTAAGTAAGAAAAAA+AGG + chr1_2:59617418-59617437 None:intergenic 15.0%
!! TAAGTATAATAAGATAGAAA+AGG + chr1_2:59620055-59620074 None:intergenic 15.0%
!!! TTTTGGAAAAATAATAAAAG+AGG - chr1_2:59622105-59622124 Msa0081100:five_prime_UTR 15.0%
!! ACTTAATTAAACAACAAACA+TGG + chr1_2:59616830-59616849 None:intergenic 20.0%
!!! TTGTTTGATGATTGTAATAA+TGG - chr1_2:59617507-59617526 Msa0081100:intron 20.0%
!! TCATAATTGTTAGTATTATG+AGG - chr1_2:59617807-59617826 Msa0081100:CDS 20.0%
!!! CTTTTTATTTATGAAGAACA+AGG - chr1_2:59618820-59618839 Msa0081100:CDS 20.0%
!!! TATGATTGATTTAAACTCAA+AGG - chr1_2:59619753-59619772 Msa0081100:CDS 20.0%
!! TTGAAAAACAAAGAAAAGAA+AGG + chr1_2:59620086-59620105 None:intergenic 20.0%
!! AATCAACAATTAAAATCCTA+AGG + chr1_2:59620110-59620129 None:intergenic 20.0%
!! AAGTATTAACTTATATGAGA+AGG - chr1_2:59620786-59620805 Msa0081100:CDS 20.0%
!!! GTATTTTACCAGATTAAATA+AGG + chr1_2:59621445-59621464 None:intergenic 20.0%
!!! TTCTTTCTAAAATCAATTCT+TGG - chr1_2:59622249-59622268 Msa0081100:five_prime_UTR 20.0%
!!! CTTTCTTTTAATTACAAAGA+GGG - chr1_2:59622275-59622294 Msa0081100:five_prime_UTR 20.0%
! ATATAGTATTTATGGCATGA+TGG - chr1_2:59617123-59617142 Msa0081100:CDS 25.0%
! GATCATGACAGTATAAAAAT+TGG + chr1_2:59617633-59617652 None:intergenic 25.0%
! CAAGATGACAAAATTATGTA+AGG + chr1_2:59617729-59617748 None:intergenic 25.0%
!! TTTGTCATCTTGAAAAGTAT+TGG - chr1_2:59617737-59617756 Msa0081100:CDS 25.0%
! TAATTGTTAGTATTATGAGG+AGG - chr1_2:59617810-59617829 Msa0081100:CDS 25.0%
! AATTGTTAGTATTATGAGGA+GGG - chr1_2:59617811-59617830 Msa0081100:CDS 25.0%
!! AAAGTCTCTTTTTCTTTTGT+GGG + chr1_2:59619057-59619076 None:intergenic 25.0%
! ACAAAAGAAAAAGAGACTTT+GGG - chr1_2:59619057-59619076 Msa0081100:CDS 25.0%
!! ATTCTATTTCTTTGTTCACA+TGG + chr1_2:59619171-59619190 None:intergenic 25.0%
! TTCACTAGATCCATTATATT+GGG + chr1_2:59619292-59619311 None:intergenic 25.0%
! TTTCACTAGATCCATTATAT+TGG + chr1_2:59619293-59619312 None:intergenic 25.0%
! TGTTGTATAGAAACAAGTTA+TGG - chr1_2:59619329-59619348 Msa0081100:CDS 25.0%
! AGAAACAAGTTATGGATATT+AGG - chr1_2:59619337-59619356 Msa0081100:CDS 25.0%
! TAAATGATTTGAAGATCGAA+GGG - chr1_2:59619791-59619810 Msa0081100:CDS 25.0%
! TGTTCTCTTATAATGTAATC+AGG - chr1_2:59620131-59620150 Msa0081100:CDS 25.0%
! GCATTAACTATCAAACTAAT+AGG + chr1_2:59620218-59620237 None:intergenic 25.0%
! ATGTTAGAAACTGTTGTATT+TGG + chr1_2:59621059-59621078 None:intergenic 25.0%
!! TTCAAACTCCTTATTTAATC+TGG - chr1_2:59621434-59621453 Msa0081100:intron 25.0%
!! TTTTCTTAGAATAGATGGAA+AGG - chr1_2:59621803-59621822 Msa0081100:five_prime_UTR 25.0%
! AAGTTGTTAAAGCTTATGAA+CGG - chr1_2:59621995-59622014 Msa0081100:five_prime_UTR 25.0%
! AAGTTCAACAGATAGAATAA+AGG + chr1_2:59622056-59622075 None:intergenic 25.0%
!!! ATTTTAACCTCTCAACTTTT+GGG + chr1_2:59622086-59622105 None:intergenic 25.0%
!!! AATTTTAACCTCTCAACTTT+TGG + chr1_2:59622087-59622106 None:intergenic 25.0%
!! AAGTTGAGAGGTTAAAATTT+TGG - chr1_2:59622088-59622107 Msa0081100:five_prime_UTR 25.0%
! CCTCTTTGTAATTAAAAGAA+AGG + chr1_2:59622277-59622296 None:intergenic 25.0%
!!! CCTTTCTTTTAATTACAAAG+AGG - chr1_2:59622274-59622293 Msa0081100:five_prime_UTR 25.0%
AATATCTAATTTGGGCAAGT+GGG + chr1_2:59616919-59616938 None:intergenic 30.0%
AAATATCTAATTTGGGCAAG+TGG + chr1_2:59616920-59616939 None:intergenic 30.0%
AAGAGTAAGTAGTACAAGAA+AGG + chr1_2:59617348-59617367 None:intergenic 30.0%
TAACAAGTAACTAACCTTGT+TGG + chr1_2:59617395-59617414 None:intergenic 30.0%
! ATGTGTTTCTGTCTTGTAAA+GGG - chr1_2:59617464-59617483 Msa0081100:intron 30.0%
GTGATGATTCTTGTATGATT+TGG - chr1_2:59617906-59617925 Msa0081100:CDS 30.0%
! TATGATTTGGATTGACTTAG+TGG - chr1_2:59617919-59617938 Msa0081100:CDS 30.0%
! AAAACTTCATGCAACTTTTG+AGG - chr1_2:59618073-59618092 Msa0081100:intron 30.0%
TACCTCAATACAATACAAAG+AGG - chr1_2:59618191-59618210 Msa0081100:CDS 30.0%
AAAGTCAATGATCAAACTAC+CGG + chr1_2:59618510-59618529 None:intergenic 30.0%
! CAAGAAGTTTTTGAACTAAC+AGG - chr1_2:59618665-59618684 Msa0081100:CDS 30.0%
CACACAAAGTCAAATCAAAT+GGG + chr1_2:59618904-59618923 None:intergenic 30.0%
! CAAAGTCTCTTTTTCTTTTG+TGG + chr1_2:59619058-59619077 None:intergenic 30.0%
CACAAAAGAAAAAGAGACTT+TGG - chr1_2:59619056-59619075 Msa0081100:CDS 30.0%
CAAAAGAAAAAGAGACTTTG+GGG - chr1_2:59619058-59619077 Msa0081100:CDS 30.0%
TATTTCTTTGTTCACATGGA+TGG + chr1_2:59619167-59619186 None:intergenic 30.0%
CTTTGTGATACAATACCTAA+GGG + chr1_2:59619268-59619287 None:intergenic 30.0%
TCACTAGATCCATTATATTG+GGG + chr1_2:59619291-59619310 None:intergenic 30.0%
! AGATAAGAGAGATAGCTTTA+TGG - chr1_2:59619380-59619399 Msa0081100:CDS 30.0%
AAACTTAACGATACTGTATG+TGG - chr1_2:59619478-59619497 Msa0081100:CDS 30.0%
! CTTCAAAAGACATAGTTTTC+TGG - chr1_2:59619521-59619540 Msa0081100:CDS 30.0%
!!! AAGACATAGTTTTCTGGTTT+AGG - chr1_2:59619527-59619546 Msa0081100:CDS 30.0%
ATCAATCATATCCGTATCTT+TGG + chr1_2:59619743-59619762 None:intergenic 30.0%
CTAAATGATTTGAAGATCGA+AGG - chr1_2:59619790-59619809 Msa0081100:CDS 30.0%
!!! TTCTTTGTTTTTCAAGCCTT+AGG - chr1_2:59620091-59620110 Msa0081100:CDS 30.0%
AACTATCAAACTAATAGGAC+CGG + chr1_2:59620213-59620232 None:intergenic 30.0%
GATCTTCATGAAAATGTAGT+GGG - chr1_2:59620251-59620270 Msa0081100:CDS 30.0%
ATAGGAGGGATTAATTGATT+GGG + chr1_2:59620371-59620390 None:intergenic 30.0%
TATAGGAGGGATTAATTGAT+TGG + chr1_2:59620372-59620391 None:intergenic 30.0%
CAATTAATCCCTCCTATATT+CGG - chr1_2:59620374-59620393 Msa0081100:CDS 30.0%
CTATGATTAAGATAACTGGA+TGG - chr1_2:59620435-59620454 Msa0081100:CDS 30.0%
CAAGAAGCTTTCGTTAATTT+CGG - chr1_2:59620536-59620555 Msa0081100:CDS 30.0%
! TTTTCTTACTCACAGAAAGT+AGG + chr1_2:59620649-59620668 None:intergenic 30.0%
TGTGAGTAAGAAAATAGATG+CGG - chr1_2:59620655-59620674 Msa0081100:CDS 30.0%
! TGTGTTTTCCAGTAAAATGT+TGG - chr1_2:59620835-59620854 Msa0081100:CDS 30.0%
! AGTATTCTCCAACATTTTAC+TGG + chr1_2:59620846-59620865 None:intergenic 30.0%
!! GTTCACAATTCGTTTTTGTT+CGG + chr1_2:59620879-59620898 None:intergenic 30.0%
! TAGCAAAATTCTTGATGACT+CGG - chr1_2:59620925-59620944 Msa0081100:CDS 30.0%
!!! TCTTCCATGTATGTTTTAAC+AGG - chr1_2:59621099-59621118 Msa0081100:intron 30.0%
AGTACCTGTTAAAACATACA+TGG + chr1_2:59621106-59621125 None:intergenic 30.0%
!!! TGTATGTTTTAACAGGTACT+TGG - chr1_2:59621106-59621125 Msa0081100:intron 30.0%
TAACTGTTCTTTAGTTAGAG+TGG + chr1_2:59621357-59621376 None:intergenic 30.0%
ACTCTAACTAAAGAACAGTT+AGG - chr1_2:59621356-59621375 Msa0081100:intron 30.0%
CTCTAACTAAAGAACAGTTA+GGG - chr1_2:59621357-59621376 Msa0081100:intron 30.0%
ATCTGTCCATCTTGTAAATT+TGG - chr1_2:59621382-59621401 Msa0081100:intron 30.0%
TCTGTTAAGCTAGTTACTTA+TGG + chr1_2:59621559-59621578 None:intergenic 30.0%
ACAAGTTTCTTATGTTCCTA+AGG + chr1_2:59621677-59621696 None:intergenic 30.0%
! CCATCTATTCTAAGAAAAGT+CGG + chr1_2:59621801-59621820 None:intergenic 30.0%
! TTTTTGTGTAGCATAACACA+TGG - chr1_2:59621881-59621900 Msa0081100:five_prime_UTR 30.0%
AACCAGATGTTTGGAAATAA+TGG - chr1_2:59621932-59621951 Msa0081100:five_prime_UTR 30.0%
ACCAGATGTTTGGAAATAAT+GGG - chr1_2:59621933-59621952 Msa0081100:five_prime_UTR 30.0%
GTTCGATATTTAAAAGAAGC+TGG - chr1_2:59622022-59622041 Msa0081100:five_prime_UTR 30.0%
CAATGTAACTCTTATGTTTC+AGG - chr1_2:59622146-59622165 Msa0081100:five_prime_UTR 30.0%
TAAAAACAGCACCAAGTAGA+TGG - chr1_2:59616963-59616982 Msa0081100:exon 35.0%
GAGTGAATCTATCAAAGTGT+TGG - chr1_2:59616999-59617018 Msa0081100:CDS 35.0%
ATTCCTTTCCATCTTCACAT+GGG - chr1_2:59617076-59617095 Msa0081100:CDS 35.0%
TAGTATTTATGGCATGATGG+CGG - chr1_2:59617126-59617145 Msa0081100:CDS 35.0%
TGAATTATACTGACCTTGCT+TGG - chr1_2:59617174-59617193 Msa0081100:intron 35.0%
!! GAAAGGAAGGTATTAGCTAA+GGG + chr1_2:59617331-59617350 None:intergenic 35.0%
!! AGAAAGGAAGGTATTAGCTA+AGG + chr1_2:59617332-59617351 None:intergenic 35.0%
GTAAGTAGTACAAGAAAGGA+AGG + chr1_2:59617344-59617363 None:intergenic 35.0%
CTTGTTGGAAGGAAAAAACT+TGG + chr1_2:59617380-59617399 None:intergenic 35.0%
!!! CAAGTTTTTTCCTTCCAACA+AGG - chr1_2:59617378-59617397 Msa0081100:intron 35.0%
AAGTAACTAACCTTGTTGGA+AGG + chr1_2:59617391-59617410 None:intergenic 35.0%
! CATGTGTTTCTGTCTTGTAA+AGG - chr1_2:59617463-59617482 Msa0081100:intron 35.0%
!! GGATTTGTTTCTGACTTGTT+TGG - chr1_2:59617528-59617547 Msa0081100:intron 35.0%
! TGTTGACTGTCTTCTATGAT+TGG - chr1_2:59617674-59617693 Msa0081100:CDS 35.0%
GTTGACTGTCTTCTATGATT+GGG - chr1_2:59617675-59617694 Msa0081100:CDS 35.0%
!! GTAAGCTGTTGTTACTTTGT+TGG + chr1_2:59618174-59618193 None:intergenic 35.0%
TGCCTCTTTGTATTGTATTG+AGG + chr1_2:59618196-59618215 None:intergenic 35.0%
TCTTGCAATGAACAAGGATA+GGG + chr1_2:59618448-59618467 None:intergenic 35.0%
TTGTTCATTGCAAGACTTCT+GGG - chr1_2:59618453-59618472 Msa0081100:CDS 35.0%
CGGTGAATAATCGCATAAAA+TGG + chr1_2:59618482-59618501 None:intergenic 35.0%
TTGAACTAACAGGTTATGAC+AGG - chr1_2:59618675-59618694 Msa0081100:CDS 35.0%
TGAACTAACAGGTTATGACA+GGG - chr1_2:59618676-59618695 Msa0081100:CDS 35.0%
GATGGCTTATAAATTTCACG+AGG - chr1_2:59618700-59618719 Msa0081100:CDS 35.0%
AAATTTCACGAGGATGATCA+TGG - chr1_2:59618710-59618729 Msa0081100:CDS 35.0%
AATTTCACGAGGATGATCAT+GGG - chr1_2:59618711-59618730 Msa0081100:CDS 35.0%
CGTGACAATCAACTATCATA+CGG + chr1_2:59618847-59618866 None:intergenic 35.0%
CCACACAAAGTCAAATCAAA+TGG + chr1_2:59618905-59618924 None:intergenic 35.0%
!! CCATTTGATTTGACTTTGTG+TGG - chr1_2:59618902-59618921 Msa0081100:CDS 35.0%
! TAGTTGCCATTTGCAGTATA+TGG - chr1_2:59618946-59618965 Msa0081100:intron 35.0%
TGTTAGCCATATACTGCAAA+TGG + chr1_2:59618955-59618974 None:intergenic 35.0%
TTTGCAGTATATGGCTAACA+TGG - chr1_2:59618955-59618974 Msa0081100:intron 35.0%
TTCAATTGCTTCCTTGGTTA+TGG - chr1_2:59618979-59618998 Msa0081100:intron 35.0%
TTTGTCATAACACTACACCA+AGG - chr1_2:59619089-59619108 Msa0081100:CDS 35.0%
AATTCACAAGCATACCTTAG+AGG + chr1_2:59619127-59619146 None:intergenic 35.0%
AAGGTATGCTTGTGAATTTC+TGG - chr1_2:59619129-59619148 Msa0081100:CDS 35.0%
GCTTTGTGATACAATACCTA+AGG + chr1_2:59619269-59619288 None:intergenic 35.0%
ATCACAAAGCCCCAATATAA+TGG - chr1_2:59619279-59619298 Msa0081100:CDS 35.0%
ATGGATCTAGTGAAATGTGA+TGG - chr1_2:59619298-59619317 Msa0081100:CDS 35.0%
TGGATCTAGTGAAATGTGAT+GGG - chr1_2:59619299-59619318 Msa0081100:CDS 35.0%
AAAGCTATCTCTCTTATCTG+AGG + chr1_2:59619379-59619398 None:intergenic 35.0%
TAACGATACTGTATGTGGAA+TGG - chr1_2:59619483-59619502 Msa0081100:CDS 35.0%
AAAGCCTTGAATGATGATCT+TGG + chr1_2:59619631-59619650 None:intergenic 35.0%
! ACCATGGAAAGACTTTGAAA+TGG - chr1_2:59619678-59619697 Msa0081100:CDS 35.0%
TCCATTTCAAAGTCTTTCCA+TGG + chr1_2:59619682-59619701 None:intergenic 35.0%
! ATCAAAATTTCCGAGTTGAC+AGG - chr1_2:59619919-59619938 Msa0081100:CDS 35.0%
! ACATTTACTCACACTTGTTG+AGG - chr1_2:59619969-59619988 Msa0081100:CDS 35.0%
AGTCAAGAAGATGCTTAATC+TGG - chr1_2:59620008-59620027 Msa0081100:CDS 35.0%
CAATTCGAGATCAAAACACA+CGG - chr1_2:59620173-59620192 Msa0081100:CDS 35.0%
AATTCGAGATCAAAACACAC+GGG - chr1_2:59620174-59620193 Msa0081100:CDS 35.0%
GGATCTTCATGAAAATGTAG+TGG - chr1_2:59620250-59620269 Msa0081100:CDS 35.0%
CTTCTGAGCAGTTATATCTT+GGG + chr1_2:59620291-59620310 None:intergenic 35.0%
TCTTCTGAGCAGTTATATCT+TGG + chr1_2:59620292-59620311 None:intergenic 35.0%
CTTGTAATCTCCTTCAATTC+GGG + chr1_2:59620333-59620352 None:intergenic 35.0%
CCTTGTAATCTCCTTCAATT+CGG + chr1_2:59620334-59620353 None:intergenic 35.0%
TAGGAGGGATTAATTGATTG+GGG + chr1_2:59620370-59620389 None:intergenic 35.0%
AATTCATCTGTGCCGAATAT+AGG + chr1_2:59620389-59620408 None:intergenic 35.0%
ATATTCGGCACAGATGAATT+TGG - chr1_2:59620389-59620408 Msa0081100:CDS 35.0%
GCAGCTATGATTAAGATAAC+TGG - chr1_2:59620431-59620450 Msa0081100:CDS 35.0%
!! GTGATGGATAAAATGCTTCT+AGG - chr1_2:59620470-59620489 Msa0081100:CDS 35.0%
GTACTTAATAAAGCGATGAC+TGG - chr1_2:59620563-59620582 Msa0081100:CDS 35.0%
! TAATAAAGCGATGACTGGTT+TGG - chr1_2:59620568-59620587 Msa0081100:CDS 35.0%
! GAAACAGAAAAGGTTCCTTT+TGG - chr1_2:59620590-59620609 Msa0081100:CDS 35.0%
!!! TTCCTTTTGGTTTTCTCTCT+CGG - chr1_2:59620603-59620622 Msa0081100:CDS 35.0%
AGTAAGAAAATAGATGCGGA+GGG - chr1_2:59620659-59620678 Msa0081100:CDS 35.0%
CTTATATGAGAAGGCAAATC+AGG - chr1_2:59620795-59620814 Msa0081100:CDS 35.0%
AAATCAGGAATCCTTTGTCT+GGG - chr1_2:59620810-59620829 Msa0081100:CDS 35.0%
AATGTTGGAGAATACTGAGT+TGG - chr1_2:59620850-59620869 Msa0081100:CDS 35.0%
ATGTTGGAGAATACTGAGTT+GGG - chr1_2:59620851-59620870 Msa0081100:CDS 35.0%
! CATCAAGAATTTTGCTAAGC+TGG + chr1_2:59620922-59620941 None:intergenic 35.0%
ATCTAGACAGCATCATTGAT+GGG - chr1_2:59620948-59620967 Msa0081100:CDS 35.0%
ATTCATGACTTGACTAAGAG+AGG + chr1_2:59621174-59621193 None:intergenic 35.0%
CTCTTAGTCAAGTCATGAAT+AGG - chr1_2:59621174-59621193 Msa0081100:intron 35.0%
TCATGAATAGGAGTAACACA+AGG - chr1_2:59621186-59621205 Msa0081100:intron 35.0%
CCGCAACATCATTCATTATT+CGG + chr1_2:59621217-59621236 None:intergenic 35.0%
CCGAATAATGAATGATGTTG+CGG - chr1_2:59621214-59621233 Msa0081100:intron 35.0%
! TCTAAGACTATCACCATACA+AGG + chr1_2:59621258-59621277 None:intergenic 35.0%
TGAGCTCCAAATTTACAAGA+TGG + chr1_2:59621391-59621410 None:intergenic 35.0%
! ATCTTGTAAATTTGGAGCTC+AGG - chr1_2:59621390-59621409 Msa0081100:intron 35.0%
! GAGTTTGAAATGCTTGAGTA+TGG + chr1_2:59621423-59621442 None:intergenic 35.0%
! CCGACTTTTCTTAGAATAGA+TGG - chr1_2:59621798-59621817 Msa0081100:five_prime_UTR 35.0%
ACAACTTTCTACTGATGTGT+AGG + chr1_2:59621982-59622001 None:intergenic 35.0%
AGAAGAAGGAAGGAAAGTCA+AGG - chr1_2:59616782-59616801 Msa0081100:three_prime_UTR 40.0%
!! CTATCAAAGTGTTGGTCTGT+TGG - chr1_2:59617007-59617026 Msa0081100:CDS 40.0%
CATTCCTTTCCATCTTCACA+TGG - chr1_2:59617075-59617094 Msa0081100:CDS 40.0%
TTCCTTTCCATCTTCACATG+GGG - chr1_2:59617077-59617096 Msa0081100:CDS 40.0%
CACACAATTGTGACTGAGAA+GGG + chr1_2:59617153-59617172 None:intergenic 40.0%
TTATACTGACCTTGCTTGGT+TGG - chr1_2:59617178-59617197 Msa0081100:intron 40.0%
GTATGGTAGTCACACACAAT+TGG - chr1_2:59617296-59617315 Msa0081100:intron 40.0%
! GAATTGTTGGATGATTGGCT+AGG + chr1_2:59618002-59618021 None:intergenic 40.0%
AGCCAATCATCCAACAATTC+AGG - chr1_2:59618002-59618021 Msa0081100:intron 40.0%
GCCAATCATCCAACAATTCA+GGG - chr1_2:59618003-59618022 Msa0081100:intron 40.0%
TCCCTGAATTGTTGGATGAT+TGG + chr1_2:59618007-59618026 None:intergenic 40.0%
TCTTGATCTCCCTGAATTGT+TGG + chr1_2:59618015-59618034 None:intergenic 40.0%
GGAGATCAAGAAATAGTGCT+AGG - chr1_2:59618024-59618043 Msa0081100:intron 40.0%
TTCCTTTGACTACTCGAGTT+CGG - chr1_2:59618106-59618125 Msa0081100:intron 40.0%
!! GTTGTTACTTTGTTGGACCT+TGG + chr1_2:59618167-59618186 None:intergenic 40.0%
AAAGCTAGCAAGCAACCAAA+AGG + chr1_2:59618230-59618249 None:intergenic 40.0%
TTTAGACGAGAAAACGTGCA+AGG - chr1_2:59618247-59618266 Msa0081100:CDS 40.0%
TATGTCAGTTCCAATGCCAA+GGG + chr1_2:59618351-59618370 None:intergenic 40.0%
TTATGTCAGTTCCAATGCCA+AGG + chr1_2:59618352-59618371 None:intergenic 40.0%
!! ACAAAAGGCACTAGGATTTG+CGG - chr1_2:59618406-59618425 Msa0081100:CDS 40.0%
GTCTTGCAATGAACAAGGAT+AGG + chr1_2:59618449-59618468 None:intergenic 40.0%
CAGAAGTCTTGCAATGAACA+AGG + chr1_2:59618454-59618473 None:intergenic 40.0%
CTTGTTCATTGCAAGACTTC+TGG - chr1_2:59618452-59618471 Msa0081100:CDS 40.0%
TGATCAAACTACCGGTAACA+CGG + chr1_2:59618502-59618521 None:intergenic 40.0%
AGATTGCAATCTTTGCCTAG+TGG - chr1_2:59618611-59618630 Msa0081100:CDS 40.0%
ATTTCACGAGGATGATCATG+GGG - chr1_2:59618712-59618731 Msa0081100:CDS 40.0%
ATTGCTGAGGTAACAAAGAC+AGG - chr1_2:59618740-59618759 Msa0081100:CDS 40.0%
ATATCTGGGTTTGCACTATC+CGG - chr1_2:59618772-59618791 Msa0081100:CDS 40.0%
TTGTCACGCAAAACATGTGA+AGG - chr1_2:59618859-59618878 Msa0081100:CDS 40.0%
TTTGTGTGGTTCGACCTTAA+GGG - chr1_2:59618916-59618935 Msa0081100:intron 40.0%
ACTGCAAATGGCAACTATGT+GGG + chr1_2:59618943-59618962 None:intergenic 40.0%
TACTGCAAATGGCAACTATG+TGG + chr1_2:59618944-59618963 None:intergenic 40.0%
CATGGATTCAATTGCTTCCT+TGG - chr1_2:59618973-59618992 Msa0081100:intron 40.0%
!! GAAAAAGAGACTTTGGGGTT+TGG - chr1_2:59619063-59619082 Msa0081100:CDS 40.0%
CAAGCATACCTTAGAGGAAA+GGG + chr1_2:59619121-59619140 None:intergenic 40.0%
ACAAGCATACCTTAGAGGAA+AGG + chr1_2:59619122-59619141 None:intergenic 40.0%
GGATCTAGTGAAATGTGATG+GGG - chr1_2:59619300-59619319 Msa0081100:CDS 40.0%
! TCTCTTATCTGAGGTTCACT+CGG + chr1_2:59619370-59619389 None:intergenic 40.0%
AGTCGAATCTGTATGGTACT+CGG + chr1_2:59619410-59619429 None:intergenic 40.0%
TCAAACCAGTCGAATCTGTA+TGG + chr1_2:59619417-59619436 None:intergenic 40.0%
!! AGATTCGACTGGTTTGAGTA+CGG - chr1_2:59619420-59619439 Msa0081100:CDS 40.0%
GCATCCAAGATCATCATTCA+AGG - chr1_2:59619624-59619643 Msa0081100:CDS 40.0%
GAGAAACGCATCCAAAGATA+CGG - chr1_2:59619729-59619748 Msa0081100:CDS 40.0%
! AACAGCAACAGTGCCTATTT+TGG - chr1_2:59619861-59619880 Msa0081100:CDS 40.0%
TCAACATCCACTGCCAAAAT+AGG + chr1_2:59619877-59619896 None:intergenic 40.0%
!! ATTTTGGCAGTGGATGTTGA+TGG - chr1_2:59619877-59619896 Msa0081100:CDS 40.0%
! TTTTGGCAGTGGATGTTGAT+GGG - chr1_2:59619878-59619897 Msa0081100:CDS 40.0%
!!! TGTAGTGGGAGTTTGTTTTG+TGG - chr1_2:59620265-59620284 Msa0081100:CDS 40.0%
GACAAATTCACCCGAATTGA+AGG - chr1_2:59620320-59620339 Msa0081100:CDS 40.0%
CCGAATTGAAGGAGATTACA+AGG - chr1_2:59620331-59620350 Msa0081100:CDS 40.0%
! GGATAAAATGCTTCTAGGAG+AGG - chr1_2:59620475-59620494 Msa0081100:CDS 40.0%
!! ATGCTTCTAGGAGAGGTTTT+CGG - chr1_2:59620482-59620501 Msa0081100:CDS 40.0%
!! GACTGGTTTGGAAACAGAAA+AGG - chr1_2:59620580-59620599 Msa0081100:CDS 40.0%
TTCCGAGAGAGAAAACCAAA+AGG + chr1_2:59620608-59620627 None:intergenic 40.0%
!!! TTTTGGTTTTCTCTCTCGGA+AGG - chr1_2:59620607-59620626 Msa0081100:CDS 40.0%
!!! TTTGGTTTTCTCTCTCGGAA+GGG - chr1_2:59620608-59620627 Msa0081100:CDS 40.0%
GAGTAAGAAAATAGATGCGG+AGG - chr1_2:59620658-59620677 Msa0081100:CDS 40.0%
TACTTTCAGTCTCTTGAGAG+CGG + chr1_2:59620771-59620790 None:intergenic 40.0%
CAAATCAGGAATCCTTTGTC+TGG - chr1_2:59620809-59620828 Msa0081100:CDS 40.0%
GAAAACACAATCCCAGACAA+AGG + chr1_2:59620824-59620843 None:intergenic 40.0%
GATCTAGACAGCATCATTGA+TGG - chr1_2:59620947-59620966 Msa0081100:CDS 40.0%
AACTCTTCCTTGCATTCATG+TGG - chr1_2:59621013-59621032 Msa0081100:CDS 40.0%
TTTCACACCACATGAATGCA+AGG + chr1_2:59621023-59621042 None:intergenic 40.0%
GTGGTGTGAAATTTGAACAC+AGG - chr1_2:59621032-59621051 Msa0081100:CDS 40.0%
! TGATAGTCTTAGACTTCAGC+AGG - chr1_2:59621265-59621284 Msa0081100:intron 40.0%
TCCATCAATTCCACACCAAA+TGG - chr1_2:59621311-59621330 Msa0081100:intron 40.0%
!! TCCATTTGGTGTGGAATTGA+TGG + chr1_2:59621315-59621334 None:intergenic 40.0%
ATCAATTCCACACCAAATGG+AGG - chr1_2:59621314-59621333 Msa0081100:intron 40.0%
ATAACAACCTGACCTCCATT+TGG + chr1_2:59621329-59621348 None:intergenic 40.0%
TAAGCTATCTGAGTTCTGCA+TGG + chr1_2:59621519-59621538 None:intergenic 40.0%
GTCGGTCTGATATTGATATG+TGG + chr1_2:59621783-59621802 None:intergenic 40.0%
TTGTGTAGCATAACACATGG+TGG - chr1_2:59621884-59621903 Msa0081100:five_prime_UTR 40.0%
! AGCATAACACATGGTGGAAA+TGG - chr1_2:59621890-59621909 Msa0081100:five_prime_UTR 40.0%
! GCATAACACATGGTGGAAAT+GGG - chr1_2:59621891-59621910 Msa0081100:five_prime_UTR 40.0%
! CATAACACATGGTGGAAATG+GGG - chr1_2:59621892-59621911 Msa0081100:five_prime_UTR 40.0%
GCCCATTATTTCCAAACATC+TGG + chr1_2:59621937-59621956 None:intergenic 40.0%
!! TAATGGGCTAGAATCAGAAG+AGG - chr1_2:59621949-59621968 Msa0081100:five_prime_UTR 40.0%
!! AATGGGCTAGAATCAGAAGA+GGG - chr1_2:59621950-59621969 Msa0081100:five_prime_UTR 40.0%
CGAAAAGCTTGACTGAGAAT+AGG + chr1_2:59622225-59622244 None:intergenic 40.0%
! CTAATTTGGGCAAGTGGGTT+TGG + chr1_2:59616914-59616933 None:intergenic 45.0%
TCCTTTCCATCTTCACATGG+GGG - chr1_2:59617078-59617097 Msa0081100:CDS 45.0%
ATGATACCCCCATGTGAAGA+TGG + chr1_2:59617087-59617106 None:intergenic 45.0%
GCACACAATTGTGACTGAGA+AGG + chr1_2:59617154-59617173 None:intergenic 45.0%
GTGATAAAATGTCGACCACG+AGG - chr1_2:59617976-59617995 Msa0081100:intron 45.0%
!! CATGCAACTTTTGAGGAGTC+TGG - chr1_2:59618080-59618099 Msa0081100:intron 45.0%
!! TTGATGGAGAGCATCAACCA+AGG - chr1_2:59618147-59618166 Msa0081100:CDS 45.0%
TGCATACAGTGAGAATGCAC+CGG - chr1_2:59618274-59618293 Msa0081100:CDS 45.0%
!!! TTTTGTAGCGCAGAAGCACT+CGG + chr1_2:59618392-59618411 None:intergenic 45.0%
GCGATTATTCACCGTGTTAC+CGG - chr1_2:59618488-59618507 Msa0081100:CDS 45.0%
GGAACTTCATAAGGCTTCAC+TGG + chr1_2:59618536-59618555 None:intergenic 45.0%
GCAGTCATGGGAACTTCATA+AGG + chr1_2:59618545-59618564 None:intergenic 45.0%
GGAAAGGCTTTGCGATACAA+TGG - chr1_2:59618640-59618659 Msa0081100:CDS 45.0%
AACAGGTTATGACAGGGTGA+TGG - chr1_2:59618682-59618701 Msa0081100:CDS 45.0%
! ACAGGTCTAGAGCCATATCT+GGG - chr1_2:59618758-59618777 Msa0081100:CDS 45.0%
GGATAGTGCAAACCCAGATA+TGG + chr1_2:59618773-59618792 None:intergenic 45.0%
! AAATAAAAAGCGCGCAGCCT+GGG + chr1_2:59618810-59618829 None:intergenic 45.0%
! TAAATAAAAAGCGCGCAGCC+TGG + chr1_2:59618811-59618830 None:intergenic 45.0%
CTTTGTGTGGTTCGACCTTA+AGG - chr1_2:59618915-59618934 Msa0081100:intron 45.0%
CTGCAAATGGCAACTATGTG+GGG + chr1_2:59618942-59618961 None:intergenic 45.0%
GACTACTACAGCCATAACCA+AGG + chr1_2:59618993-59619012 None:intergenic 45.0%
GTCAATGACAGCGATGAAGA+TGG - chr1_2:59619010-59619029 Msa0081100:intron 45.0%
AGAGGAAAGGGAACAAACCT+TGG + chr1_2:59619109-59619128 None:intergenic 45.0%
! GGTTTGTTCCCTTTCCTCTA+AGG - chr1_2:59619110-59619129 Msa0081100:CDS 45.0%
GAGTACCATACAGATTCGAC+TGG - chr1_2:59619409-59619428 Msa0081100:CDS 45.0%
! ACGGATAACTTGTCTGATGC+AGG - chr1_2:59619439-59619458 Msa0081100:CDS 45.0%
! CGGATAACTTGTCTGATGCA+GGG - chr1_2:59619440-59619459 Msa0081100:CDS 45.0%
TCGTTAAGTTTAAGAGCCCC+TGG + chr1_2:59619469-59619488 None:intergenic 45.0%
TTTGAAGATCGAAGGGATGC+AGG - chr1_2:59619798-59619817 Msa0081100:CDS 45.0%
!!! AACAGTGCCTATTTTGGCAG+TGG - chr1_2:59619867-59619886 Msa0081100:CDS 45.0%
! GATGTTGATGGGATGGTCAA+TGG - chr1_2:59619889-59619908 Msa0081100:CDS 45.0%
TTGATGGGATGGTCAATGGT+TGG - chr1_2:59619893-59619912 Msa0081100:CDS 45.0%
TTTCCAATAGCTTCGCCAAC+CGG + chr1_2:59619949-59619968 None:intergenic 45.0%
ATGCTTAATCTGGCACTGCA+GGG - chr1_2:59620018-59620037 Msa0081100:CDS 45.0%
CAAAACACACGGGTCTAAGA+CGG - chr1_2:59620184-59620203 Msa0081100:CDS 45.0%
TAGTTAATGCGTGTGCAAGC+AGG - chr1_2:59620228-59620247 Msa0081100:CDS 45.0%
AGTTAATGCGTGTGCAAGCA+GGG - chr1_2:59620229-59620248 Msa0081100:CDS 45.0%
AACTGCTCAGAAGACAGTCA+TGG - chr1_2:59620298-59620317 Msa0081100:CDS 45.0%
CATCTGTGCCGAATATAGGA+GGG + chr1_2:59620385-59620404 None:intergenic 45.0%
TCATCTGTGCCGAATATAGG+AGG + chr1_2:59620386-59620405 None:intergenic 45.0%
!! AATTTGGCTGGTGTTGTGAG+TGG - chr1_2:59620405-59620424 Msa0081100:CDS 45.0%
CTGCAAAAAACAGAAGACCC+CGG + chr1_2:59620693-59620712 None:intergenic 45.0%
!!! TTTTTTGCAGCTAGCTAGCC+CGG - chr1_2:59620703-59620722 Msa0081100:CDS 45.0%
! TGAGAGCGGTTTGTTCAGAT+AGG + chr1_2:59620757-59620776 None:intergenic 45.0%
ATTCACTCTGCATGAGGTAC+TGG - chr1_2:59621145-59621164 Msa0081100:intron 45.0%
ATCGCGATGGAAACCTTGTA+TGG - chr1_2:59621242-59621261 Msa0081100:intron 45.0%
TCTTAGACTTCAGCAGGTCT+TGG - chr1_2:59621271-59621290 Msa0081100:intron 45.0%
! ACACCTAGTTCTCTTGTGCT+AGG - chr1_2:59621645-59621664 Msa0081100:intron 45.0%
TGTCCTAGCACAAGAGAACT+AGG + chr1_2:59621651-59621670 None:intergenic 45.0%
TTGTGCTAGGACACTACCTT+AGG - chr1_2:59621658-59621677 Msa0081100:intron 45.0%
TATTGCACGGGATACTTGCT+AGG + chr1_2:59621711-59621730 None:intergenic 45.0%
TGCGTCTGTGCAATATTGCA+CGG + chr1_2:59621724-59621743 None:intergenic 45.0%
TGCAATATTGCACAGACGCA+GGG - chr1_2:59621724-59621743 Msa0081100:five_prime_UTR 45.0%
GCTTGACTGAGAATAGGTGA+AGG + chr1_2:59622219-59622238 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTTTGAAA+CGG - chr1_2:59617768-59617787 Msa0081100:CDS 5.0%
AGCACCAAGTAGATGGATGC+TGG - chr1_2:59616970-59616989 Msa0081100:exon 50.0%
CACACCAGCATCCATCTACT+TGG + chr1_2:59616977-59616996 None:intergenic 50.0%
ACCCCCATGTGAAGATGGAA+AGG + chr1_2:59617082-59617101 None:intergenic 50.0%
ACCTTGCTTGGTTGGAGTTG+TGG - chr1_2:59617186-59617205 Msa0081100:intron 50.0%
TCCACAACTCCAACCAAGCA+AGG + chr1_2:59617190-59617209 None:intergenic 50.0%
TGGTTGGAGTTGTGGAGTAG+AGG - chr1_2:59617194-59617213 Msa0081100:intron 50.0%
CACCGAACTCGAGTAGTCAA+AGG + chr1_2:59618111-59618130 None:intergenic 50.0%
! CGTGTCTCTGGTTCAGTTGA+TGG - chr1_2:59618131-59618150 Msa0081100:CDS 50.0%
CTAGCAAGCAACCAAAAGGC+TGG + chr1_2:59618226-59618245 None:intergenic 50.0%
CTCACCATGGTCAGCATTTC+CGG + chr1_2:59618296-59618315 None:intergenic 50.0%
AGTCATGCTGTCCCTAGTGT+CGG - chr1_2:59618314-59618333 Msa0081100:CDS 50.0%
GAGTGCTTCTGCGCTACAAA+AGG - chr1_2:59618391-59618410 Msa0081100:CDS 50.0%
!! TCTGCGCTACAAAAGGCACT+AGG - chr1_2:59618398-59618417 Msa0081100:CDS 50.0%
!! AAAGGCACTAGGATTTGCGG+AGG - chr1_2:59618409-59618428 Msa0081100:CDS 50.0%
ATCTTTGCCTAGTGGCAGCA+TGG - chr1_2:59618619-59618638 Msa0081100:CDS 50.0%
! GACAGGTCTAGAGCCATATC+TGG - chr1_2:59618757-59618776 Msa0081100:CDS 50.0%
! AATAAAAAGCGCGCAGCCTG+GGG + chr1_2:59618809-59618828 None:intergenic 50.0%
TTGTCTGATGCAGGGTTTCC+AGG - chr1_2:59619448-59619467 Msa0081100:CDS 50.0%
TGTCTGATGCAGGGTTTCCA+GGG - chr1_2:59619449-59619468 Msa0081100:CDS 50.0%
ACACTGCTGCAGAAATCCGA+TGG - chr1_2:59619554-59619573 Msa0081100:CDS 50.0%
CACTGCTGCAGAAATCCGAT+GGG - chr1_2:59619555-59619574 Msa0081100:CDS 50.0%
ACTGCTGCAGAAATCCGATG+GGG - chr1_2:59619556-59619575 Msa0081100:CDS 50.0%
AAAGCATGAACCTGGCGAAC+AGG - chr1_2:59619585-59619604 Msa0081100:CDS 50.0%
GGCTTTCCTCGAAGTTGTGA+AGG - chr1_2:59619645-59619664 Msa0081100:CDS 50.0%
TCCTCGAAGTTGTGAAGGCT+AGG - chr1_2:59619650-59619669 Msa0081100:CDS 50.0%
! TCCTAGCCTTCACAACTTCG+AGG + chr1_2:59619654-59619673 None:intergenic 50.0%
! TGAAGGCTAGGAGCATACCA+TGG - chr1_2:59619662-59619681 Msa0081100:CDS 50.0%
GATCGAAGGGATGCAGGAAT+TGG - chr1_2:59619804-59619823 Msa0081100:CDS 50.0%
CAGTGACGAGTGAGATGGTT+CGG - chr1_2:59619830-59619849 Msa0081100:CDS 50.0%
! TTCCGAGTTGACAGGTCTTC+CGG - chr1_2:59619927-59619946 Msa0081100:CDS 50.0%
AACCGGAAGACCTGTCAACT+CGG + chr1_2:59619932-59619951 None:intergenic 50.0%
GATGCTTAATCTGGCACTGC+AGG - chr1_2:59620017-59620036 Msa0081100:CDS 50.0%
TCGGCACAGATGAATTTGGC+TGG - chr1_2:59620393-59620412 Msa0081100:CDS 50.0%
GATAACTGGATGGAAGCGAG+AGG - chr1_2:59620445-59620464 Msa0081100:CDS 50.0%
AACAGAAGACCCCGGTAACT+AGG + chr1_2:59620685-59620704 None:intergenic 50.0%
! TGTAACGCTTGTTGCAGCTC+CGG + chr1_2:59620725-59620744 None:intergenic 50.0%
! GAATTTTGCTAAGCTGGCGC+TGG + chr1_2:59620916-59620935 None:intergenic 50.0%
CAGGTACTTGGATCTCGAGA+TGG - chr1_2:59621118-59621137 Msa0081100:intron 50.0%
GGCTGAATTCACTCTGCATG+AGG - chr1_2:59621139-59621158 Msa0081100:intron 50.0%
TTCCACACCAAATGGAGGTC+AGG - chr1_2:59621319-59621338 Msa0081100:intron 50.0%
! AACCTGACCTCCATTTGGTG+TGG + chr1_2:59621324-59621343 None:intergenic 50.0%
GCGTCTGTGCAATATTGCAC+GGG + chr1_2:59621723-59621742 None:intergenic 50.0%
GTGCAATATTGCACAGACGC+AGG - chr1_2:59621723-59621742 Msa0081100:five_prime_UTR 50.0%
! AACACATGGTGGAAATGGGG+TGG - chr1_2:59621895-59621914 Msa0081100:five_prime_UTR 50.0%
! GCAGTGCTGAACCAGATGTT+TGG - chr1_2:59621923-59621942 Msa0081100:five_prime_UTR 50.0%
TTGTTTGTCTCCCACCCAGC+TGG + chr1_2:59617222-59617241 None:intergenic 55.0%
AGCTGGGTGGGAGACAAACA+AGG - chr1_2:59617221-59617240 Msa0081100:intron 55.0%
GCTGGGTGGGAGACAAACAA+GGG - chr1_2:59617222-59617241 Msa0081100:intron 55.0%
TGCAGGTGCAGGGTATGGTA+TGG - chr1_2:59617279-59617298 Msa0081100:intron 55.0%
! GGCAAGCAGATCCAGCCTTT+TGG - chr1_2:59618212-59618231 Msa0081100:CDS 55.0%
TGCACCGGAAATGCTGACCA+TGG - chr1_2:59618289-59618308 Msa0081100:CDS 55.0%
AGGGACAGCATGACTCACCA+TGG + chr1_2:59618309-59618328 None:intergenic 55.0%
CAGTTCCAATGCCAAGGGCA+GGG + chr1_2:59618346-59618365 None:intergenic 55.0%
TCAGTTCCAATGCCAAGGGC+AGG + chr1_2:59618347-59618366 None:intergenic 55.0%
GAAGTTCCCATGACTGCAGC+AGG - chr1_2:59618548-59618567 Msa0081100:CDS 55.0%
AATGCGCCTGCTGCAGTCAT+GGG + chr1_2:59618557-59618576 None:intergenic 55.0%
TAATGCGCCTGCTGCAGTCA+TGG + chr1_2:59618558-59618577 None:intergenic 55.0%
TGCCTAGTGGCAGCATGGAA+AGG - chr1_2:59618624-59618643 Msa0081100:CDS 55.0%
AGCCTTTCCATGCTGCCACT+AGG + chr1_2:59618629-59618648 None:intergenic 55.0%
TCACGAGGATGATCATGGGG+AGG - chr1_2:59618715-59618734 Msa0081100:CDS 55.0%
TCATGGGGAGGTGATTGCTG+AGG - chr1_2:59618727-59618746 Msa0081100:CDS 55.0%
GCAACTATGTGGGGCCCTTA+AGG + chr1_2:59618933-59618952 None:intergenic 55.0%
CTGATGCGAGATGCACCCTT+AGG - chr1_2:59619250-59619269 Msa0081100:CDS 55.0%
GTCTGATGCAGGGTTTCCAG+GGG - chr1_2:59619450-59619469 Msa0081100:CDS 55.0%
CATGCTTTGCACCACCCCAT+CGG + chr1_2:59619573-59619592 None:intergenic 55.0%
GGTGGTGCAAAGCATGAACC+TGG - chr1_2:59619577-59619596 Msa0081100:CDS 55.0%
GAACCTGGCGAACAGGATGA+TGG - chr1_2:59619592-59619611 Msa0081100:CDS 55.0%
CTACCATCATCCTGTTCGCC+AGG + chr1_2:59619598-59619617 None:intergenic 55.0%
! CTGGCGAACAGGATGATGGT+AGG - chr1_2:59619596-59619615 Msa0081100:CDS 55.0%
GGAAGCAGTGACGAGTGAGA+TGG - chr1_2:59619825-59619844 Msa0081100:CDS 55.0%
! GGCAGTGGATGTTGATGGGA+TGG - chr1_2:59619882-59619901 Msa0081100:CDS 55.0%
GAGTTGACAGGTCTTCCGGT+TGG - chr1_2:59619931-59619950 Msa0081100:CDS 55.0%
CTTCCGGTTGGCGAAGCTAT+TGG - chr1_2:59619943-59619962 Msa0081100:CDS 55.0%
! CACGGGTCTAAGACGGATTC+CGG - chr1_2:59620191-59620210 Msa0081100:CDS 55.0%
AACTGGATGGAAGCGAGAGG+AGG - chr1_2:59620448-59620467 Msa0081100:CDS 55.0%
ATGGAAGCGAGAGGAGGTGA+TGG - chr1_2:59620454-59620473 Msa0081100:CDS 55.0%
! GTAACGCTTGTTGCAGCTCC+GGG + chr1_2:59620724-59620743 None:intergenic 55.0%
TGTTGCGGAGCATATCGCGA+TGG - chr1_2:59621229-59621248 Msa0081100:intron 55.0%
GCAGCAGCCCAAAAGTTGAG+AGG - chr1_2:59622076-59622095 Msa0081100:five_prime_UTR 55.0%
TGTGGAGTAGAGGCTCCAGC+TGG - chr1_2:59617204-59617223 Msa0081100:intron 60.0%
GTGGAGTAGAGGCTCCAGCT+GGG - chr1_2:59617205-59617224 Msa0081100:intron 60.0%
AGTAGAGGCTCCAGCTGGGT+GGG - chr1_2:59617209-59617228 Msa0081100:intron 60.0%
GGGTGGGAGACAAACAAGGG+CGG - chr1_2:59617225-59617244 Msa0081100:intron 60.0%
TGGGAGACAAACAAGGGCGG+TGG - chr1_2:59617228-59617247 Msa0081100:intron 60.0%
CATCAGCAGCAGCAGCAAGC+TGG + chr1_2:59617258-59617277 None:intergenic 60.0%
CTGCTGATGCTGCAGGTGCA+GGG - chr1_2:59617269-59617288 Msa0081100:intron 60.0%
GATGCTGCAGGTGCAGGGTA+TGG - chr1_2:59617274-59617293 Msa0081100:intron 60.0%
! GGATGATTGGCTAGGCCTCG+TGG + chr1_2:59617994-59618013 None:intergenic 60.0%
!! TCGAGTTCGGTGCGTGTCTC+TGG - chr1_2:59618119-59618138 Msa0081100:CDS 60.0%
CAGGGTGGTCACCGACACTA+GGG + chr1_2:59618328-59618347 None:intergenic 60.0%
TTCCAATGCCAAGGGCAGGG+TGG + chr1_2:59618343-59618362 None:intergenic 60.0%
!! TAGCGCAGAAGCACTCGGTG+CGG + chr1_2:59618387-59618406 None:intergenic 60.0%
TCCGGCCACAGATATTCCCC+AGG - chr1_2:59618790-59618809 Msa0081100:CDS 60.0%
GCCTGGGGAATATCTGTGGC+CGG + chr1_2:59618794-59618813 None:intergenic 60.0%
CGCAGCCTGGGGAATATCTG+TGG + chr1_2:59618798-59618817 None:intergenic 60.0%
ACAACAGTGTCTGCGTGCGC+AGG + chr1_2:59619222-59619241 None:intergenic 60.0%
GCTGCAGAAATCCGATGGGG+TGG - chr1_2:59619559-59619578 Msa0081100:CDS 60.0%
GATGCGGAGGGCCTAGTTAC+CGG - chr1_2:59620671-59620690 Msa0081100:CDS 60.0%
ATGCGGAGGGCCTAGTTACC+GGG - chr1_2:59620672-59620691 Msa0081100:CDS 60.0%
GAGTAGAGGCTCCAGCTGGG+TGG - chr1_2:59617208-59617227 Msa0081100:intron 65.0%
GCTGCTGCTGCTGATGCTGC+AGG - chr1_2:59617262-59617281 Msa0081100:intron 65.0%
GCTGCTGATGCTGCAGGTGC+AGG - chr1_2:59617268-59617287 Msa0081100:intron 65.0%
GCAGGGTGGTCACCGACACT+AGG + chr1_2:59618329-59618348 None:intergenic 65.0%
GACCACCCTGCCCTTGGCAT+TGG - chr1_2:59618338-59618357 Msa0081100:CDS 65.0%
TGCGGAGGGCCTAGTTACCG+GGG - chr1_2:59620673-59620692 Msa0081100:CDS 65.0%
GTCGGTGACCACCCTGCCCT+TGG - chr1_2:59618332-59618351 Msa0081100:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 59616779 59622299 59616779 ID=Msa0081100;Name=Msa0081100
chr1_2 mRNA 59616779 59622299 59616779 ID=Msa0081100-mRNA-1;Parent=Msa0081100;Name=Msa0081100-mRNA-1;_AED=0.02;_eAED=0.02;_QI=632|1|1|1|0.75|0.8|5|197|1124
chr1_2 exon 59616779 59617186 59616779 ID=Msa0081100-mRNA-1:exon:19343;Parent=Msa0081100-mRNA-1
chr1_2 exon 59617667 59617957 59617667 ID=Msa0081100-mRNA-1:exon:19342;Parent=Msa0081100-mRNA-1
chr1_2 exon 59618109 59618925 59618109 ID=Msa0081100-mRNA-1:exon:19341;Parent=Msa0081100-mRNA-1
chr1_2 exon 59619039 59621105 59619039 ID=Msa0081100-mRNA-1:exon:19340;Parent=Msa0081100-mRNA-1
chr1_2 exon 59621679 59622299 59621679 ID=Msa0081100-mRNA-1:exon:19339;Parent=Msa0081100-mRNA-1
chr1_2 five_prime_UTR 59621679 59622299 59621679 ID=Msa0081100-mRNA-1:five_prime_utr;Parent=Msa0081100-mRNA-1
chr1_2 five_prime_UTR 59621095 59621105 59621095 ID=Msa0081100-mRNA-1:five_prime_utr;Parent=Msa0081100-mRNA-1
chr1_2 CDS 59619039 59621094 59619039 ID=Msa0081100-mRNA-1:cds;Parent=Msa0081100-mRNA-1
chr1_2 CDS 59618109 59618925 59618109 ID=Msa0081100-mRNA-1:cds;Parent=Msa0081100-mRNA-1
chr1_2 CDS 59617667 59617957 59617667 ID=Msa0081100-mRNA-1:cds;Parent=Msa0081100-mRNA-1
chr1_2 CDS 59616976 59617186 59616976 ID=Msa0081100-mRNA-1:cds;Parent=Msa0081100-mRNA-1
chr1_2 three_prime_UTR 59616779 59616975 59616779 ID=Msa0081100-mRNA-1:three_prime_utr;Parent=Msa0081100-mRNA-1
Gene Sequence

>Msa0081100

ATGTCGACCACGAGGCCTAGCCAATCATCCAACAATTCAGGGAGATCAAGAAATAGTGCTAGGATTATTGCTCAGACAACAGTAGATGCAAAACTTCATGCAACTTTTGAGGAGTCTGGTAGTTCCTTTGACTACTCGAGTTCGGTGCGTGTCTCTGGTTCAGTTGATGGAGAGCATCAACCAAGGTCCAACAAAGTAACAACAGCTTACCTCAATACAATACAAAGAGGCAAGCAGATCCAGCCTTTTGGTTGCTTGCTAGCTTTAGACGAGAAAACGTGCAAGGTTATTGCATACAGTGAGAATGCACCGGAAATGCTGACCATGGTGAGTCATGCTGTCCCTAGTGTCGGTGACCACCCTGCCCTTGGCATTGGAACTGACATAAGAACTATCTTCACCGCACCGAGTGCTTCTGCGCTACAAAAGGCACTAGGATTTGCGGAGGTTTCGCTTCTTAACCCTATCCTTGTTCATTGCAAGACTTCTGGGAAGCCATTTTATGCGATTATTCACCGTGTTACCGGTAGTTTGATCATTGACTTTGAGCCAGTGAAGCCTTATGAAGTTCCCATGACTGCAGCAGGCGCATTACAGTCTTACAAACTTGCTGCTAAAGCAATTACAAGATTGCAATCTTTGCCTAGTGGCAGCATGGAAAGGCTTTGCGATACAATGGTTCAAGAAGTTTTTGAACTAACAGGTTATGACAGGGTGATGGCTTATAAATTTCACGAGGATGATCATGGGGAGGTGATTGCTGAGGTAACAAAGACAGGTCTAGAGCCATATCTGGGTTTGCACTATCCGGCCACAGATATTCCCCAGGCTGCGCGCTTTTTATTTATGAAGAACAAGGTCCGTATGATAGTTGATTGTCACGCAAAACATGTGAAGGTTCTTCAAGACGAAAAACTCCCATTTGATTTGACTTTGTGTGGTTCGACCTTAAGGGCCCCACATAGTTGCCATTTGCAGTATATGGCTAACATGGATTCAATTGCTTCCTTGGTTATGGCTGTAGTAGTCAATGACAGCGATGAAGATGGAGATAGTGCTGATGCAGTTCTCCCACAAAAGAAAAAGAGACTTTGGGGTTTGGTAGTTTGTCATAACACTACACCAAGGTTTGTTCCCTTTCCTCTAAGGTATGCTTGTGAATTTCTGGCTCAAGTATTTGCCATCCATGTGAACAAAGAAATAGAATTAGAATATCAGATTCTTGAGAAGAATATCCTGCGCACGCAGACACTGTTGTGCGATATGCTGATGCGAGATGCACCCTTAGGTATTGTATCACAAAGCCCCAATATAATGGATCTAGTGAAATGTGATGGGGCTGCACTGTTGTATAGAAACAAGTTATGGATATTAGGATCGACGCCGAGTGAACCTCAGATAAGAGAGATAGCTTTATGGATGTCCGAGTACCATACAGATTCGACTGGTTTGAGTACGGATAACTTGTCTGATGCAGGGTTTCCAGGGGCTCTTAAACTTAACGATACTGTATGTGGAATGGCAGCTGTTAGAATAACTTCAAAAGACATAGTTTTCTGGTTTAGGTCGCACACTGCTGCAGAAATCCGATGGGGTGGTGCAAAGCATGAACCTGGCGAACAGGATGATGGTAGGAAGATGCATCCAAGATCATCATTCAAGGCTTTCCTCGAAGTTGTGAAGGCTAGGAGCATACCATGGAAAGACTTTGAAATGGATGCTATTCATTCGTTACAGTTAATACTGAGAAACGCATCCAAAGATACGGATATGATTGATTTAAACTCAAAGGCAATCAATACAAGACTAAATGATTTGAAGATCGAAGGGATGCAGGAATTGGAAGCAGTGACGAGTGAGATGGTTCGGTTAATTGAAACAGCAACAGTGCCTATTTTGGCAGTGGATGTTGATGGGATGGTCAATGGTTGGAATATCAAAATTTCCGAGTTGACAGGTCTTCCGGTTGGCGAAGCTATTGGAAAACATTTACTCACACTTGTTGAGGATTCTTCAACTGATATAGTCAAGAAGATGCTTAATCTGGCACTGCAGGGTCAAGAAGAGAAGAATGTTCAATTCGAGATCAAAACACACGGGTCTAAGACGGATTCCGGTCCTATTAGTTTGATAGTTAATGCGTGTGCAAGCAGGGATCTTCATGAAAATGTAGTGGGAGTTTGTTTTGTGGCCCAAGATATAACTGCTCAGAAGACAGTCATGGACAAATTCACCCGAATTGAAGGAGATTACAAGGCAATTGTACAGAACCCCAATCAATTAATCCCTCCTATATTCGGCACAGATGAATTTGGCTGGTGTTGTGAGTGGAATGCAGCTATGATTAAGATAACTGGATGGAAGCGAGAGGAGGTGATGGATAAAATGCTTCTAGGAGAGGTTTTCGGAACTCATATGTCTTGTTGTCGTCTAAAGAATCAAGAAGCTTTCGTTAATTTCGGCATTGTACTTAATAAAGCGATGACTGGTTTGGAAACAGAAAAGGTTCCTTTTGGTTTTCTCTCTCGGAAGGGAAAGTATGTAGAGTGCCTACTTTCTGTGAGTAAGAAAATAGATGCGGAGGGCCTAGTTACCGGGGTCTTCTGTTTTTTGCAGCTAGCTAGCCCGGAGCTGCAACAAGCGTTACATATTCAACGCCTATCTGAACAAACCGCTCTCAAGAGACTGAAAGTATTAACTTATATGAGAAGGCAAATCAGGAATCCTTTGTCTGGGATTGTGTTTTCCAGTAAAATGTTGGAGAATACTGAGTTGGGAACCGAACAAAAACGAATTGTGAACACTAGTTCTCAGTGCCAGCGCCAGCTTAGCAAAATTCTTGATGACTCGGATCTAGACAGCATCATTGATGGGTACTTGGATCTCGAGATGGCTGAATTCACTCTGCATGAGGTACTGGTGACCTCTCTTAGTCAAGTCATGAATAGGAGTAACACAAGGAGTATCCGAATAATGAATGATGTTGCGGAGCATATCGCGATGGAAACCTTGTATGGTGATAGTCTTAGACTTCAGCAGGTCTTGGCTGACTTCTTACTGATTTCCATCAATTCCACACCAAATGGAGGTCAGGTTGTTATAGCAGCCACTCTAACTAAAGAACAGTTAGGGAAATCTGTCCATCTTGTAAATTTGGAGCTCAGCATAACACATGGTGGAAATGGGGTGGCAGAAGCAGTGCTGAACCAGATGTTTGGAAATAATGGGCTAGAATCAGAAGAGGGTATTAGCCTACACATCAGTAGAAAGTTGTTAAAGCTTATGAACGGCGATGTTCGATATTTAAAAGAAGCTGGAAAATCATCCTTTATTCTATCTGTTGAACTTGCAGCAGCCCAAAAGTTGAGAGGTTAA
Protein sequence

>Msa0081100

MSTTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGEHQPRSNKVTTAYLNTIQRGKQIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIRTIFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKKKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYRNKLWILGSTPSEPQIREIALWMSEYHTDSTGLSTDNLSDAGFPGALKLNDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQDDGRKMHPRSSFKAFLEVVKARSIPWKDFEMDAIHSLQLILRNASKDTDMIDLNSKAINTRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGMVNGWNIKISELTGLPVGEAIGKHLLTLVEDSSTDIVKKMLNLALQGQEEKNVQFEIKTHGSKTDSGPISLIVNACASRDLHENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAAMIKITGWKREEVMDKMLLGEVFGTHMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGFLSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLTYMRRQIRNPLSGIVFSSKMLENTELGTEQKRIVNTSSQCQRQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQVMNRSNTRSIRIMNDVAEHIAMETLYGDSLRLQQVLADFLLISINSTPNGGQVVIAATLTKEQLGKSVHLVNLELSITHGGNGVAEAVLNQMFGNNGLESEEGISLHISRKLLKLMNGDVRYLKEAGKSSFILSVELAAAQKLRG*