Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0036880 | AES61525.1 | 96.352 | 1124 | 4 | 1 | 1 | 1087 | 48 | 1171 | 0.0 | 2236 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0036880 | sp|P93673|PHYA_LATSA | 91.993 | 1124 | 53 | 1 | 1 | 1087 | 1 | 1124 | 0.0 | 2140 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0036880 | G7IAE4 | 96.352 | 1124 | 4 | 1 | 1 | 1087 | 48 | 1171 | 0.0 | 2236 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0036880 | Msa0081100 | 0.981892 | 1.045083e-153 | -8.615850e-47 |
Msa0036880 | Msa0215990 | 0.816991 | 4.156886e-52 | -8.615850e-47 |
Msa0036880 | Msa1411000 | 0.808683 | 2.745005e-50 | -8.615850e-47 |
Msa0036880 | Msa1454130 | 0.977107 | 4.004240e-143 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0036880 | MtrunA17_Chr1g0193441 | 96.352 | 1124 | 4 | 1 | 1 | 1087 | 1 | 1124 | 0.0 | 2234 |
Msa0036880 | MtrunA17_Chr2g0294361 | 50.975 | 1128 | 498 | 10 | 2 | 1084 | 29 | 1146 | 0.0 | 1136 |
Msa0036880 | MtrunA17_Chr2g0303971 | 46.071 | 1120 | 524 | 15 | 7 | 1079 | 16 | 1102 | 0.0 | 999 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0036880 | AT1G09570.3 | 76.560 | 1122 | 225 | 2 | 1 | 1084 | 5 | 1126 | 0.0 | 1788 |
Msa0036880 | AT1G09570.4 | 76.560 | 1122 | 225 | 2 | 1 | 1084 | 1 | 1122 | 0.0 | 1788 |
Msa0036880 | AT1G09570.5 | 76.560 | 1122 | 225 | 2 | 1 | 1084 | 1 | 1122 | 0.0 | 1788 |
Msa0036880 | AT1G09570.1 | 76.560 | 1122 | 225 | 2 | 1 | 1084 | 1 | 1122 | 0.0 | 1788 |
Msa0036880 | AT1G09570.6 | 76.560 | 1122 | 225 | 2 | 1 | 1084 | 1 | 1122 | 0.0 | 1788 |
Msa0036880 | AT1G09570.2 | 76.529 | 1014 | 200 | 2 | 109 | 1084 | 1 | 1014 | 0.0 | 1625 |
Msa0036880 | AT5G35840.1 | 50.269 | 1114 | 500 | 10 | 9 | 1079 | 6 | 1108 | 0.0 | 1128 |
Msa0036880 | AT2G18790.1 | 49.867 | 1127 | 502 | 10 | 9 | 1084 | 40 | 1154 | 0.0 | 1125 |
Msa0036880 | AT4G16250.1 | 49.777 | 1121 | 502 | 9 | 8 | 1079 | 45 | 1153 | 0.0 | 1120 |
Msa0036880 | AT2G18790.2 | 50.755 | 1060 | 459 | 10 | 9 | 1017 | 40 | 1087 | 0.0 | 1077 |
Msa0036880 | AT4G18130.1 | 46.112 | 1106 | 512 | 17 | 24 | 1079 | 23 | 1094 | 0.0 | 980 |
Find 313 sgRNAs with CRISPR-Local
Find 415 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATATATTATATAGTATTTA+TGG | 0.103098 | 1_1:-65713328 | Msa0036880:five_prime_UTR |
ATCTGTCCATCTTGTAAATT+TGG | 0.118129 | 1_1:-65709060 | Msa0036880:CDS |
CAATGTAACTCTTATGTTTC+AGG | 0.121337 | 1_1:-65708296 | Msa0036880:three_prime_UTR |
AAGGTATGCTTGTGAATTTC+TGG | 0.149045 | 1_1:-65711313 | Msa0036880:CDS |
ACCTTGCTTGGTTGGAGTTT+TGG | 0.160969 | 1_1:-65713257 | Msa0036880:five_prime_UTR |
TTCACTAGATCCATTATATT+AGG | 0.168165 | 1_1:+65711153 | None:intergenic |
CTCACCATGGTCAGCATTTC+CGG | 0.182471 | 1_1:+65712149 | None:intergenic |
CTTGTTCATTGCAAGACTTC+TGG | 0.215857 | 1_1:-65711990 | Msa0036880:CDS |
AAGTTGAGAGGTTAAAATTT+TGG | 0.216048 | 1_1:-65708354 | Msa0036880:exon |
ATCAATCATATCCGTATCTT+TGG | 0.245243 | 1_1:+65710702 | None:intergenic |
AACCAGATGTTTGGAAATAA+TGG | 0.247267 | 1_1:-65708510 | Msa0036880:CDS |
CAAGAAGCTTTCGTTAATTT+CGG | 0.247847 | 1_1:-65709906 | Msa0036880:CDS |
TTCAATTGCTTCCTTGGTTA+TGG | 0.256368 | 1_1:-65711463 | Msa0036880:CDS |
CATGGATTCAATTGCTTCCT+TGG | 0.263394 | 1_1:-65711469 | Msa0036880:CDS |
AACAGCAACAGTGCCTATTT+TGG | 0.264602 | 1_1:-65710581 | Msa0036880:CDS |
TTCTTTCTAAAATCAATTCT+TGG | 0.264850 | 1_1:-65708192 | Msa0036880:three_prime_UTR |
GCTGCTGATGCTGCAGGTGC+AGG | 0.269416 | 1_1:-65713169 | Msa0036880:five_prime_UTR |
TTGTCTGATGCAGGGTTTCC+AGG | 0.274418 | 1_1:-65710994 | Msa0036880:CDS |
ATATTCGGCACAGATGAATT+TGG | 0.275063 | 1_1:-65710053 | Msa0036880:CDS |
TAGTTGCCATTTGCAGTATA+TGG | 0.290132 | 1_1:-65711496 | Msa0036880:CDS |
AGCCAATCATCCAACAATTC+AGG | 0.290374 | 1_1:-65712440 | Msa0036880:CDS |
GCTGCTGCTGCTGATGCTGC+AGG | 0.290725 | 1_1:-65713175 | Msa0036880:five_prime_UTR |
CTTTGTGTGGTTCGACCTTA+AGG | 0.295665 | 1_1:-65711527 | Msa0036880:CDS |
TCGAGTTCGGTGCGTGTCTC+TGG | 0.306663 | 1_1:-65712323 | Msa0036880:CDS |
TATAGGAGGGATTAATTGAT+TGG | 0.308265 | 1_1:+65710073 | None:intergenic |
TCACTAGATCCATTATATTA+GGG | 0.310081 | 1_1:+65711154 | None:intergenic |
CCGCAACATCATTCATTATT+CGG | 0.310601 | 1_1:+65709228 | None:intergenic |
GGTTTGTTCCCTTTCCTCTA+AGG | 0.315081 | 1_1:-65711332 | Msa0036880:CDS |
AGAAACAAGTTATGGATATT+AGG | 0.318535 | 1_1:-65711105 | Msa0036880:CDS |
CGGTGAATAATCGCATAAAA+TGG | 0.319261 | 1_1:+65711963 | None:intergenic |
CTTCCGGTTGGCGAAGCTAT+TGG | 0.320481 | 1_1:-65710499 | Msa0036880:CDS |
GACAGGTCTAGAGCCATATC+TGG | 0.327846 | 1_1:-65711685 | Msa0036880:CDS |
AGATAAGAGAGATAGCTTTA+TGG | 0.328011 | 1_1:-65711062 | Msa0036880:CDS |
TCAACATCCACTGCCAAAAT+AGG | 0.328387 | 1_1:+65710568 | None:intergenic |
CTAATTTGGGCAAGTGGGTT+TGG | 0.332887 | 1_1:+65713532 | None:intergenic |
CTTATATGAGAAGGCAAATC+AGG | 0.333168 | 1_1:-65709647 | Msa0036880:CDS |
GCGATTATTCACCGTGTTAC+CGG | 0.333840 | 1_1:-65711954 | Msa0036880:CDS |
TCCCTGAATTGTTGGATGAT+TGG | 0.338191 | 1_1:+65712438 | None:intergenic |
CTTGTAATCTCCTTCAATTC+GGG | 0.339613 | 1_1:+65710112 | None:intergenic |
TCTTCTGAGCAGTTATATCT+TGG | 0.340208 | 1_1:+65710153 | None:intergenic |
TCTTGATCTCCCTGAATTGT+TGG | 0.341463 | 1_1:+65712430 | None:intergenic |
TTCCGAGTTGACAGGTCTTC+CGG | 0.341506 | 1_1:-65710515 | Msa0036880:CDS |
CCTTGTAATCTCCTTCAATT+CGG | 0.346124 | 1_1:+65710111 | None:intergenic |
GCATTAACTATCAAACTAAT+AGG | 0.348807 | 1_1:+65710227 | None:intergenic |
ATCACAAAGCCCTAATATAA+TGG | 0.350876 | 1_1:-65711163 | Msa0036880:CDS |
AGCATAACACATGGTGGAAA+TGG | 0.350939 | 1_1:-65708552 | Msa0036880:CDS |
TTGTTTGTCTCCCACCCAGC+TGG | 0.355008 | 1_1:+65713224 | None:intergenic |
GGCAAGCAGATCCAGCCTTT+TGG | 0.361823 | 1_1:-65712230 | Msa0036880:CDS |
CGTGTCTCTGGTTCAGTTGA+TGG | 0.365933 | 1_1:-65712311 | Msa0036880:CDS |
GCCCATTATTTCCAAACATC+TGG | 0.367039 | 1_1:+65708508 | None:intergenic |
GATCGAAGGGATGCAGGAAT+TGG | 0.372613 | 1_1:-65710638 | Msa0036880:CDS |
GTGATGGATAAAATGCTTCT+AGG | 0.375567 | 1_1:-65709972 | Msa0036880:CDS |
TCCATTTGGTGTGGAATTGA+TGG | 0.377120 | 1_1:+65709130 | None:intergenic |
CTGCTGATGCTGCAGGTGCA+GGG | 0.377433 | 1_1:-65713168 | Msa0036880:five_prime_UTR |
GCAGCTATGATTAAGATAAC+TGG | 0.378139 | 1_1:-65710011 | Msa0036880:CDS |
CAATTAATCCCTCCTATATT+CGG | 0.379281 | 1_1:-65710068 | Msa0036880:CDS |
AATTCATCTGTGCCGAATAT+AGG | 0.380738 | 1_1:+65710056 | None:intergenic |
TTGTTCATTGCAAGACTTCT+GGG | 0.382407 | 1_1:-65711989 | Msa0036880:CDS |
TAATAAAGCGATGACTGGTT+TGG | 0.382757 | 1_1:-65709874 | Msa0036880:CDS |
TTTGTGTGGTTCGACCTTAA+GGG | 0.388633 | 1_1:-65711526 | Msa0036880:CDS |
ACTCTAACTAAAGAACAGTT+AGG | 0.392636 | 1_1:-65709086 | Msa0036880:CDS |
CACGGGTCTAAGACGGATTC+CGG | 0.396350 | 1_1:-65710251 | Msa0036880:CDS |
AATTCACAAGCATACCTTAG+AGG | 0.402330 | 1_1:+65711318 | None:intergenic |
ATCTTGTAAATTTGGAGCTC+AGG | 0.402723 | 1_1:-65709052 | Msa0036880:intron |
CAAATCAGGAATCCTTTGTC+TGG | 0.404340 | 1_1:-65709633 | Msa0036880:CDS |
CCACACAAAGTCAAATCAAA+TGG | 0.404372 | 1_1:+65711540 | None:intergenic |
GCAACTATGTGGGGCCCTTA+AGG | 0.409373 | 1_1:+65711512 | None:intergenic |
TTTGGAGTAGAGGCTCCAGC+TGG | 0.410426 | 1_1:-65713239 | Msa0036880:five_prime_UTR |
CCTCTTTGTAATTAAAAGAA+AGG | 0.412093 | 1_1:+65708167 | None:intergenic |
GTAAGCTGTTGTTACTTTGT+TGG | 0.419763 | 1_1:+65712271 | None:intergenic |
TCTTAGACTTCAGCAGGTCT+TGG | 0.422081 | 1_1:-65709171 | Msa0036880:CDS |
TTGAGTGATGTTTGAGAAGA+AGG | 0.423768 | 1_1:-65713675 | None:intergenic |
CATTCCTTTCCATCTTCACA+TGG | 0.425758 | 1_1:-65713368 | Msa0036880:five_prime_UTR |
ATAGGAGGGATTAATTGATT+GGG | 0.426264 | 1_1:+65710074 | None:intergenic |
TGTAACGCTTGTTGCAGCTC+CGG | 0.426311 | 1_1:+65709720 | None:intergenic |
GACCACCCTGCCCTTGGCAT+TGG | 0.429364 | 1_1:-65712104 | Msa0036880:CDS |
TTCCTTTGACTACTCGAGTT+CGG | 0.429419 | 1_1:-65712336 | Msa0036880:CDS |
GCAGTGCTGAACCAGATGTT+TGG | 0.433058 | 1_1:-65708519 | Msa0036880:CDS |
GGATAGTGCAAACCCAGATA+TGG | 0.433533 | 1_1:+65711672 | None:intergenic |
GATGCTTAATCTGGCACTGC+AGG | 0.433909 | 1_1:-65710425 | Msa0036880:CDS |
TGAATTATACTGACCTTGCT+TGG | 0.435042 | 1_1:-65713269 | Msa0036880:five_prime_UTR |
GTTCGATATTTAAAAGAAGC+TGG | 0.435439 | 1_1:-65708420 | Msa0036880:CDS |
GACAAATTCACCCGAATTGA+AGG | 0.436659 | 1_1:-65710122 | Msa0036880:CDS |
CTTCTGAGCAGTTATATCTT+GGG | 0.437606 | 1_1:+65710154 | None:intergenic |
ACCAGATGTTTGGAAATAAT+GGG | 0.438607 | 1_1:-65708509 | Msa0036880:CDS |
AGTCAAGAAGATGCTTAATC+TGG | 0.442145 | 1_1:-65710434 | Msa0036880:CDS |
ATAACAACCTGACCTCCATT+TGG | 0.442580 | 1_1:+65709116 | None:intergenic |
TGTCTGATGCAGGGTTTCCA+GGG | 0.443340 | 1_1:-65710993 | Msa0036880:CDS |
GTCGGTGACCACCCTGCCCT+TGG | 0.448616 | 1_1:-65712110 | Msa0036880:CDS |
TCCATCAATTCCACACCAAA+TGG | 0.449632 | 1_1:-65709131 | Msa0036880:CDS |
TGCCTCTTTGTATTGTATTG+AGG | 0.450361 | 1_1:+65712249 | None:intergenic |
ATATCTGGGTTTGCACTATC+CGG | 0.451879 | 1_1:-65711670 | Msa0036880:CDS |
CTCTTAGTCAAGTCATGAAT+AGG | 0.453661 | 1_1:-65709268 | Msa0036880:CDS |
AAAGCATGAACCTGGCGAAC+AGG | 0.454684 | 1_1:-65710857 | Msa0036880:CDS |
CGAAAAGCTTGACTGAGAAT+AGG | 0.456543 | 1_1:+65708220 | None:intergenic |
ACGGATAGCTTGTCTGATGC+AGG | 0.458830 | 1_1:-65711003 | Msa0036880:CDS |
CTACCATCATCCTGTTCGCC+AGG | 0.462148 | 1_1:+65710847 | None:intergenic |
CACAGCAGCATCCATCTACT+TGG | 0.463646 | 1_1:+65713469 | None:intergenic |
TATTTCTTTGTTCACATGGA+TGG | 0.464909 | 1_1:+65711278 | None:intergenic |
TAGTTAATGCGTGTGCAAGC+AGG | 0.464965 | 1_1:-65710214 | Msa0036880:CDS |
AAATTTCACGAGGATGATCA+TGG | 0.465494 | 1_1:-65711732 | Msa0036880:CDS |
ATCAAAATTTCCGAGTTGAC+AGG | 0.466192 | 1_1:-65710523 | Msa0036880:CDS |
TAACTGTTCTTTAGTTAGAG+TGG | 0.466312 | 1_1:+65709088 | None:intergenic |
TGTTAGCCATATACTGCAAA+TGG | 0.471732 | 1_1:+65711490 | None:intergenic |
GACTGGTTTGGAAACAGAAA+AGG | 0.472692 | 1_1:-65709862 | Msa0036880:intron |
GCAGTCATGGGAACTTCATA+AGG | 0.472727 | 1_1:+65711900 | None:intergenic |
GTTGTTACTTTGTTGGACCT+TGG | 0.473773 | 1_1:+65712278 | None:intergenic |
TTATACTGACCTTGCTTGGT+TGG | 0.475973 | 1_1:-65713265 | Msa0036880:five_prime_UTR |
CAAGCATACCTTAGAGGAAA+GGG | 0.479218 | 1_1:+65711324 | None:intergenic |
ACCATGGAAAGACTTTGAAA+TGG | 0.480694 | 1_1:-65710764 | Msa0036880:CDS |
TTTCCAATAGCTTCGCCAAC+CGG | 0.480820 | 1_1:+65710496 | None:intergenic |
AAGTTCAACAGATAGAATAA+AGG | 0.481758 | 1_1:+65708389 | None:intergenic |
TTCCACACCAAATGGAGGTC+AGG | 0.481947 | 1_1:-65709123 | Msa0036880:CDS |
GATCTAGACAGCATCATTGA+TGG | 0.482806 | 1_1:-65709495 | Msa0036880:CDS |
TAACAAGTAACTAACCTTGT+TGG | 0.483286 | 1_1:+65713048 | None:intergenic |
GCATAACACATGGTGGAAAT+GGG | 0.484009 | 1_1:-65708551 | Msa0036880:CDS |
AAATATCTAATTTGGGCAAG+TGG | 0.485059 | 1_1:+65713526 | None:intergenic |
GCAGGGTGGTCACCGACACT+AGG | 0.485484 | 1_1:+65712116 | None:intergenic |
CAGTGACGAGTGAGATGGTT+CGG | 0.486902 | 1_1:-65710612 | Msa0036880:CDS |
CCATTTGATTTGACTTTGTG+TGG | 0.488925 | 1_1:-65711540 | Msa0036880:CDS |
TTGAACTAACAGGTTATGAC+AGG | 0.493092 | 1_1:-65711767 | Msa0036880:CDS |
ATTCACTCTGCATGAGGTAC+TGG | 0.493254 | 1_1:-65709297 | Msa0036880:CDS |
TTCCTTTCCATCTTCACATG+GGG | 0.494340 | 1_1:-65713366 | Msa0036880:five_prime_UTR |
GTACTTAATAAAGCGATGAC+TGG | 0.494971 | 1_1:-65709879 | Msa0036880:CDS |
GAGTGCTTCTGCGCTACAAA+AGG | 0.496096 | 1_1:-65712051 | Msa0036880:CDS |
AGAAATGAAGGTATTAGCTA+AGG | 0.496177 | 1_1:+65713108 | None:intergenic |
AAAGCCTTGAATGATGATCT+TGG | 0.496392 | 1_1:+65710814 | None:intergenic |
GCCAATCATCCAACAATTCA+GGG | 0.496752 | 1_1:-65712439 | Msa0036880:CDS |
GGCAGTGGATGTTGATGGGA+TGG | 0.498676 | 1_1:-65710560 | Msa0036880:CDS |
TCAGTTCCAATGCCAAGGGC+AGG | 0.498965 | 1_1:+65712098 | None:intergenic |
CACACAAAGTCAAATCAAAT+GGG | 0.498967 | 1_1:+65711541 | None:intergenic |
GTATGGTAGTCACACACAAT+TGG | 0.499550 | 1_1:-65713141 | Msa0036880:five_prime_UTR |
AATGTTGGAGAATACTGAGT+TGG | 0.501979 | 1_1:-65709592 | Msa0036880:CDS |
GGAACTTCATAAGGCTTCAC+TGG | 0.502178 | 1_1:+65711909 | None:intergenic |
TCCTAGCCTTCACAACTTCG+AGG | 0.505957 | 1_1:+65710791 | None:intergenic |
AGAGTAACTACAAGAAATGA+AGG | 0.508368 | 1_1:+65713096 | None:intergenic |
TGAGAGCGGTTTGTTCAGAT+AGG | 0.509064 | 1_1:+65709688 | None:intergenic |
CTGATGCGAGATGCACCCTT+AGG | 0.509221 | 1_1:-65711192 | Msa0036880:CDS |
GTCAATGACAGCGATGAAGA+TGG | 0.509661 | 1_1:-65711432 | Msa0036880:CDS |
TAATGCGCCTGCTGCAGTCA+TGG | 0.511154 | 1_1:+65711887 | None:intergenic |
ACAACTTTCTACTGATGTGT+AGG | 0.512153 | 1_1:+65708463 | None:intergenic |
CTAGCAAGCAACCAAAAGGC+TGG | 0.512234 | 1_1:+65712219 | None:intergenic |
TTTGAAGATCGAAGGGATGC+AGG | 0.512663 | 1_1:-65710644 | Msa0036880:CDS |
ATTCCTTTCCATCTTCACAT+GGG | 0.512888 | 1_1:-65713367 | Msa0036880:five_prime_UTR |
TCCATTTCAAAGTCTTTCCA+TGG | 0.514245 | 1_1:+65710763 | None:intergenic |
GCATCCAAGATCATCATTCA+AGG | 0.514409 | 1_1:-65710818 | Msa0036880:CDS |
ATGTTGGAGAATACTGAGTT+GGG | 0.514837 | 1_1:-65709591 | Msa0036880:CDS |
GCTTTGTGATACAATACCTA+AGG | 0.515012 | 1_1:+65711176 | None:intergenic |
GTAACGCTTGTTGCAGCTCC+GGG | 0.517155 | 1_1:+65709721 | None:intergenic |
GTGATGTTTGAGAAGAAGGA+AGG | 0.517404 | 1_1:-65713671 | None:intergenic |
ATTCTATTTCTTTGTTCACA+TGG | 0.517827 | 1_1:+65711274 | None:intergenic |
CTAAATGATTTGAAGATCGA+AGG | 0.518060 | 1_1:-65710652 | Msa0036880:CDS |
GATGCTGCAGGTGCAGGGTA+TGG | 0.518395 | 1_1:-65713163 | Msa0036880:five_prime_UTR |
CTATCAAAGTGTTAGTCTGT+TGG | 0.518485 | 1_1:-65713436 | Msa0036880:five_prime_UTR |
TGCCTAGTGGCAGCATGGAA+AGG | 0.518888 | 1_1:-65711818 | Msa0036880:CDS |
AACTATCAAACTAATAGGAC+CGG | 0.519104 | 1_1:+65710232 | None:intergenic |
TCAAACCAGTCGAATCTGTA+TGG | 0.519941 | 1_1:+65711028 | None:intergenic |
TATGATTGATTTAAACTCAA+AGG | 0.520564 | 1_1:-65710689 | Msa0036880:CDS |
GAAGTTCCCATGACTGCAGC+AGG | 0.521612 | 1_1:-65711894 | Msa0036880:CDS |
TCTTGTATAGAAACAAGTTA+TGG | 0.521619 | 1_1:-65711113 | Msa0036880:CDS |
CACTGCTGCAGAAATCCGAT+GGG | 0.522593 | 1_1:-65710887 | Msa0036880:CDS |
TCATTAAGTTTAAGAGCCCC+TGG | 0.525892 | 1_1:+65710976 | None:intergenic |
CACACAATTGTGACTGAGAA+GGG | 0.526633 | 1_1:+65713293 | None:intergenic |
AATATCTAATTTGGGCAAGT+GGG | 0.526680 | 1_1:+65713527 | None:intergenic |
CATGCTTTGCACCACCCCAT+CGG | 0.527680 | 1_1:+65710872 | None:intergenic |
ACATTTACTCACACTTGTTG+AGG | 0.528125 | 1_1:-65710473 | Msa0036880:CDS |
ACAACAGTGTCTGCGTGCGC+AGG | 0.530607 | 1_1:+65711223 | None:intergenic |
AGCTGGGTGGGAGACAAACA+AGG | 0.531816 | 1_1:-65713222 | Msa0036880:five_prime_UTR |
GCCTGGGGAATATCTGTGGC+CGG | 0.531960 | 1_1:+65711651 | None:intergenic |
AAAGCTAGCAAGCAACCAAA+AGG | 0.534264 | 1_1:+65712215 | None:intergenic |
GATGTTGATGGGATGGTCAA+TGG | 0.534907 | 1_1:-65710553 | Msa0036880:CDS |
TAGGAGGGATTAATTGATTG+GGG | 0.535454 | 1_1:+65710075 | None:intergenic |
TACTGCAAATGGCAACTATG+TGG | 0.535932 | 1_1:+65711501 | None:intergenic |
TGATAGTCTTAGACTTCAGC+AGG | 0.536352 | 1_1:-65709177 | Msa0036880:CDS |
GGCTTTCCTCGAAGTTGTGA+AGG | 0.538027 | 1_1:-65710797 | Msa0036880:CDS |
GAGTAGAGGCTCCAGCTGGG+TGG | 0.539902 | 1_1:-65713235 | Msa0036880:five_prime_UTR |
CCGAATTGAAGGAGATTACA+AGG | 0.539935 | 1_1:-65710111 | Msa0036880:CDS |
TCCTCGAAGTTGTGAAGGCT+AGG | 0.540137 | 1_1:-65710792 | Msa0036880:CDS |
TAGCAAAATTCTTGATGACT+CGG | 0.540197 | 1_1:-65709517 | Msa0036880:CDS |
GTCTGATGCAGGGTTTCCAG+GGG | 0.541298 | 1_1:-65710992 | Msa0036880:CDS |
ACAAAAGGCACTAGGATTTG+CGG | 0.541535 | 1_1:-65712036 | Msa0036880:CDS |
ATTGCTGAGGTAACAAAGAC+AGG | 0.541815 | 1_1:-65711702 | Msa0036880:CDS |
AGTTAATGCGTGTGCAAGCA+GGG | 0.542610 | 1_1:-65710213 | Msa0036880:CDS |
ACACTGCTGCAGAAATCCGA+TGG | 0.543900 | 1_1:-65710888 | Msa0036880:CDS |
AAATCAGGAATCCTTTGTCT+GGG | 0.547598 | 1_1:-65709632 | Msa0036880:CDS |
ATGGAAGCGAGAGGAGGTGA+TGG | 0.547827 | 1_1:-65709988 | Msa0036880:CDS |
ATCTTTGCCTAGTGGCAGCA+TGG | 0.548173 | 1_1:-65711823 | Msa0036880:CDS |
ATCGCGATGGAAACCTTGTA+TGG | 0.549194 | 1_1:-65709200 | Msa0036880:CDS |
TTATGTCAGTTCCAATGCCA+AGG | 0.550411 | 1_1:+65712093 | None:intergenic |
AAACTTAATGATACTGTATG+TGG | 0.551063 | 1_1:-65710964 | Msa0036880:CDS |
GAAATGAAGGTATTAGCTAA+GGG | 0.553749 | 1_1:+65713109 | None:intergenic |
CAGGGTGGTCACCGACACTA+GGG | 0.554292 | 1_1:+65712117 | None:intergenic |
AATTTGGCTGGTGTTGTGAG+TGG | 0.555569 | 1_1:-65710037 | Msa0036880:CDS |
ATATAGTATTTATGGCATGA+TGG | 0.555780 | 1_1:-65713320 | Msa0036880:five_prime_UTR |
AGAGGAAAGGGAACAAACCT+TGG | 0.558190 | 1_1:+65711336 | None:intergenic |
AACCGGAAGACCTGTCAACT+CGG | 0.559298 | 1_1:+65710513 | None:intergenic |
TCTCTTATCTGAGGTTCACT+CGG | 0.559883 | 1_1:+65711075 | None:intergenic |
TTGATGGGATGGTCAATGGT+TGG | 0.560226 | 1_1:-65710549 | Msa0036880:CDS |
TCATCTGTGCCGAATATAGG+AGG | 0.560999 | 1_1:+65710059 | None:intergenic |
TGGGAGACAAACAAGGGCGG+TGG | 0.561672 | 1_1:-65713215 | Msa0036880:five_prime_UTR |
TCGGCACAGATGAATTTGGC+TGG | 0.562466 | 1_1:-65710049 | Msa0036880:CDS |
CAGAAGTCTTGCAATGAACA+AGG | 0.562779 | 1_1:+65711991 | None:intergenic |
TTTGCAGTATATGGCTAACA+TGG | 0.565032 | 1_1:-65711487 | Msa0036880:CDS |
ACTGCAAATGGCAACTATGT+GGG | 0.566316 | 1_1:+65711502 | None:intergenic |
TCCAAAACTCCAACCAAGCA+AGG | 0.566788 | 1_1:+65713256 | None:intergenic |
TCTTGCAATGAACAAGGATA+GGG | 0.567253 | 1_1:+65711997 | None:intergenic |
GAGAAACGCATCCAAAGATA+CGG | 0.567684 | 1_1:-65710713 | Msa0036880:CDS |
GTCTTGCAATGAACAAGGAT+AGG | 0.570149 | 1_1:+65711996 | None:intergenic |
TACTTTCAGTCTCTTGAGAG+CGG | 0.571332 | 1_1:+65709674 | None:intergenic |
CCGAATAATGAATGATGTTG+CGG | 0.572031 | 1_1:-65709228 | Msa0036880:CDS |
TAAATGATTTGAAGATCGAA+GGG | 0.574470 | 1_1:-65710651 | Msa0036880:CDS |
GATCTTCATGAAAATGTAGT+GGG | 0.575911 | 1_1:-65710191 | Msa0036880:CDS |
GGATAAAATGCTTCTAGGAG+AGG | 0.576307 | 1_1:-65709967 | Msa0036880:CDS |
AGATTCGACTGGTTTGAGTA+CGG | 0.576797 | 1_1:-65711022 | Msa0036880:CDS |
AATGCGCCTGCTGCAGTCAT+GGG | 0.577517 | 1_1:+65711888 | None:intergenic |
GAACCTGGCGAACAGGATGA+TGG | 0.577808 | 1_1:-65710850 | Msa0036880:CDS |
CGCAGCCTGGGGAATATCTG+TGG | 0.577872 | 1_1:+65711647 | None:intergenic |
AGCCTTTCCATGCTGCCACT+AGG | 0.578839 | 1_1:+65711816 | None:intergenic |
AGAAGAAGGAAGGAAAGTCA+AGG | 0.579635 | 1_1:-65713661 | Msa0036880:five_prime_UTR |
GGAAAGGCTTTGCGATACAA+TGG | 0.579896 | 1_1:-65711802 | Msa0036880:CDS |
GAATTGTTGGATGATTGGCT+AGG | 0.581778 | 1_1:+65712443 | None:intergenic |
TGGATCTAGTGAAATGTGAT+GGG | 0.582037 | 1_1:-65711143 | Msa0036880:CDS |
AAAGTCAATGATCAAACTAC+CGG | 0.582203 | 1_1:+65711935 | None:intergenic |
AATTTCACGAGGATGATCAT+GGG | 0.582420 | 1_1:-65711731 | Msa0036880:CDS |
TCTAAGACTATCACCATACA+AGG | 0.582514 | 1_1:+65709187 | None:intergenic |
TGAGCTCCAAATTTACAAGA+TGG | 0.582870 | 1_1:+65709054 | None:intergenic |
ATCTAGACAGCATCATTGAT+GGG | 0.584630 | 1_1:-65709494 | Msa0036880:intron |
AAGTAACTAACCTTGTTGGA+AGG | 0.585743 | 1_1:+65713052 | None:intergenic |
CGGATAGCTTGTCTGATGCA+GGG | 0.586011 | 1_1:-65711002 | Msa0036880:CDS |
CAGTTCCAATGCCAAGGGCA+GGG | 0.587285 | 1_1:+65712099 | None:intergenic |
AGTAGAGGCTCCAGCTGGGT+GGG | 0.588547 | 1_1:-65713234 | Msa0036880:five_prime_UTR |
ATGGATCTAGTGAAATGTGA+TGG | 0.589258 | 1_1:-65711144 | Msa0036880:CDS |
GCACACAATTGTGACTGAGA+AGG | 0.589804 | 1_1:+65713292 | None:intergenic |
ACAGGTCTAGAGCCATATCT+GGG | 0.589991 | 1_1:-65711684 | Msa0036880:CDS |
AAGTATTAACTTATATGAGA+AGG | 0.590694 | 1_1:-65709656 | Msa0036880:CDS |
CAGGTACTTGGATCTCGAGA+TGG | 0.590762 | 1_1:-65709324 | Msa0036880:CDS |
CTCTAACTAAAGAACAGTTA+GGG | 0.590954 | 1_1:-65709085 | Msa0036880:CDS |
TACCTCAATACAATACAAAG+AGG | 0.592329 | 1_1:-65712251 | Msa0036880:CDS |
CGTGACAATCAACTATCATA+CGG | 0.592496 | 1_1:+65711598 | None:intergenic |
GGAGATCAAGAAATAGTGCT+AGG | 0.595358 | 1_1:-65712418 | Msa0036880:CDS |
CAAAACACACGGGTCTAAGA+CGG | 0.599832 | 1_1:-65710258 | Msa0036880:CDS |
CTGCAAATGGCAACTATGTG+GGG | 0.600674 | 1_1:+65711503 | None:intergenic |
GAGTTGACAGGTCTTCCGGT+TGG | 0.600729 | 1_1:-65710511 | Msa0036880:CDS |
TTGTCACGCAAAACATGTGA+AGG | 0.602272 | 1_1:-65711583 | Msa0036880:CDS |
TTGGAGTAGAGGCTCCAGCT+GGG | 0.603714 | 1_1:-65713238 | Msa0036880:five_prime_UTR |
GGTGGTGCAAAGCATGAACC+TGG | 0.605534 | 1_1:-65710865 | Msa0036880:CDS |
ACAAGCATACCTTAGAGGAA+AGG | 0.605696 | 1_1:+65711323 | None:intergenic |
TCCTTTCCATCTTCACATGG+GGG | 0.606447 | 1_1:-65713365 | Msa0036880:five_prime_UTR |
TCCGGCCACAGATATTCCCC+AGG | 0.606542 | 1_1:-65711652 | Msa0036880:CDS |
AACCTGACCTCCATTTGGTG+TGG | 0.607257 | 1_1:+65709121 | None:intergenic |
GGATCTTCATGAAAATGTAG+TGG | 0.607404 | 1_1:-65710192 | Msa0036880:CDS |
AACTGGATGGAAGCGAGAGG+AGG | 0.609754 | 1_1:-65709994 | Msa0036880:CDS |
CACCGAACTCGAGTAGTCAA+AGG | 0.611550 | 1_1:+65712334 | None:intergenic |
TATGTCAGTTCCAATGCCAA+GGG | 0.612549 | 1_1:+65712094 | None:intergenic |
GAGTACCATACAGATTCGAC+TGG | 0.614505 | 1_1:-65711033 | Msa0036880:CDS |
ATTCATGACTTGACTAAGAG+AGG | 0.616488 | 1_1:+65709271 | None:intergenic |
CATAACACATGGTGGAAATG+GGG | 0.617721 | 1_1:-65708550 | Msa0036880:CDS |
TGCATACAGTGAGAATGCAC+CGG | 0.619615 | 1_1:-65712168 | Msa0036880:CDS |
CAATTCGAGATCAAAACACA+CGG | 0.619684 | 1_1:-65710269 | Msa0036880:CDS |
GCTTGACTGAGAATAGGTGA+AGG | 0.622290 | 1_1:+65708226 | None:intergenic |
AGTCGAATCTGTATGGTACT+CGG | 0.625552 | 1_1:+65711035 | None:intergenic |
TGATCAAACTACCGGTAACA+CGG | 0.628461 | 1_1:+65711943 | None:intergenic |
TAATGGGCTAGAATCAGAAG+AGG | 0.628885 | 1_1:-65708493 | Msa0036880:CDS |
AACTGCTCAGAAGACAGTCA+TGG | 0.634261 | 1_1:-65710144 | Msa0036880:CDS |
CTGGCGAACAGGATGATGGT+AGG | 0.635088 | 1_1:-65710846 | Msa0036880:CDS |
TAATGATACTGTATGTGGAA+TGG | 0.636438 | 1_1:-65710959 | Msa0036880:CDS |
AAGTTGTTAAAGCTTATGAA+CGG | 0.636814 | 1_1:-65708447 | Msa0036880:CDS |
AAAGCTATCTCTCTTATCTG+AGG | 0.636818 | 1_1:+65711066 | None:intergenic |
ATGCTTAATCTGGCACTGCA+GGG | 0.637194 | 1_1:-65710424 | Msa0036880:intron |
GGAAGCAGTGACGAGTGAGA+TGG | 0.638270 | 1_1:-65710617 | Msa0036880:CDS |
ATCAATTCCACACCAAATGG+AGG | 0.638917 | 1_1:-65709128 | Msa0036880:CDS |
AGTCATGCTGTCCCTAGTGT+CGG | 0.639026 | 1_1:-65712128 | Msa0036880:CDS |
GGCTGAATTCACTCTGCATG+AGG | 0.639969 | 1_1:-65709303 | Msa0036880:CDS |
GCAGCAGCCCAAAAGTTGAG+AGG | 0.640874 | 1_1:-65708366 | Msa0036880:CDS |
AACACATGGTGGAAATGGGG+TGG | 0.641790 | 1_1:-65708547 | Msa0036880:CDS |
TCTGCGCTACAAAAGGCACT+AGG | 0.643845 | 1_1:-65712044 | Msa0036880:CDS |
AACAGGTTATGACAGGGTGA+TGG | 0.647543 | 1_1:-65711760 | Msa0036880:CDS |
CTTTGTGATACAATACCTAA+GGG | 0.649010 | 1_1:+65711177 | None:intergenic |
TTTAGACGAGAAAACGTGCA+AGG | 0.650029 | 1_1:-65712195 | Msa0036880:CDS |
TTGTGTAGCATAACACATGG+TGG | 0.650607 | 1_1:-65708558 | Msa0036880:intron |
TGCAGGTGCAGGGTATGGTA+TGG | 0.652960 | 1_1:-65713158 | Msa0036880:five_prime_UTR |
GAAAACACAATCCCAGACAA+AGG | 0.654982 | 1_1:+65709621 | None:intergenic |
CATCTGTGCCGAATATAGGA+GGG | 0.657662 | 1_1:+65710060 | None:intergenic |
AGATTGCAATCTTTGCCTAG+TGG | 0.660880 | 1_1:-65711831 | Msa0036880:CDS |
GGGTGGGAGACAAACAAGGG+CGG | 0.665089 | 1_1:-65713218 | Msa0036880:five_prime_UTR |
ATTTCACGAGGATGATCATG+GGG | 0.665241 | 1_1:-65711730 | Msa0036880:CDS |
ACTTAATTAAACAACAAACA+TGG | 0.667557 | 1_1:+65713616 | None:intergenic |
GACTACTACAGCCATAACCA+AGG | 0.668280 | 1_1:+65711452 | None:intergenic |
TGAACTAACAGGTTATGACA+GGG | 0.672771 | 1_1:-65711766 | Msa0036880:CDS |
CTATGATTAAGATAACTGGA+TGG | 0.673061 | 1_1:-65710007 | Msa0036880:CDS |
GCTGGGTGGGAGACAAACAA+GGG | 0.677003 | 1_1:-65713221 | Msa0036880:five_prime_UTR |
AATGGGCTAGAATCAGAAGA+GGG | 0.681452 | 1_1:-65708492 | Msa0036880:CDS |
TCACGAGGATGATCATGGGG+AGG | 0.681759 | 1_1:-65711727 | Msa0036880:CDS |
AAAGGCACTAGGATTTGCGG+AGG | 0.682229 | 1_1:-65712033 | Msa0036880:CDS |
GTGATAAAATGTCGACCACG+AGG | 0.683227 | 1_1:-65712466 | Msa0036880:exon |
TGTTGCGGAGCATATCGCGA+TGG | 0.683769 | 1_1:-65709213 | Msa0036880:CDS |
TTCCAATGCCAAGGGCAGGG+TGG | 0.684064 | 1_1:+65712102 | None:intergenic |
GGATGATTGGCTAGGCCTCG+TGG | 0.686099 | 1_1:+65712451 | None:intergenic |
TGAAGGCTAGGAGCATACCA+TGG | 0.687288 | 1_1:-65710780 | Msa0036880:CDS |
GCTGCAGAAATCCGATGGGG+TGG | 0.690305 | 1_1:-65710883 | Msa0036880:CDS |
TAGTATTTATGGCATGATGG+CGG | 0.701859 | 1_1:-65713317 | Msa0036880:five_prime_UTR |
GATAACTGGATGGAAGCGAG+AGG | 0.707153 | 1_1:-65709997 | Msa0036880:CDS |
TTTGTCATAACACTACACCA+AGG | 0.707681 | 1_1:-65711353 | Msa0036880:CDS |
TTGATGGAGAGCATCAACCA+AGG | 0.713680 | 1_1:-65712295 | Msa0036880:CDS |
AGGGACAGCATGACTCACCA+TGG | 0.719846 | 1_1:+65712136 | None:intergenic |
TAGCGCAGAAGCACTCGGTG+CGG | 0.723772 | 1_1:+65712058 | None:intergenic |
AATTCGAGATCAAAACACAC+GGG | 0.726452 | 1_1:-65710268 | Msa0036880:CDS |
TGCACCGGAAATGCTGACCA+TGG | 0.728482 | 1_1:-65712153 | Msa0036880:CDS |
GGATCTAGTGAAATGTGATG+GGG | 0.730307 | 1_1:-65711142 | Msa0036880:CDS |
TCATGAATAGGAGTAACACA+AGG | 0.732967 | 1_1:-65709256 | Msa0036880:CDS |
GATGGCTTATAAATTTCACG+AGG | 0.753601 | 1_1:-65711742 | Msa0036880:CDS |
TCATGGGGAGGTGATTGCTG+AGG | 0.754373 | 1_1:-65711715 | Msa0036880:CDS |
ACTGCTGCAGAAATCCGATG+GGG | 0.765290 | 1_1:-65710886 | Msa0036880:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAATAGATAAGAAAAAAA+AGG | + | chr1_1:65708267-65708286 | None:intergenic | 10.0% |
!!! | TTTTTTTTCTTATCTATTTT+AGG | - | chr1_1:65708266-65708285 | Msa0036880:three_prime_UTR | 10.0% |
!! | TGTAAAAAAATATCTAATTT+GGG | + | chr1_1:65708312-65708331 | None:intergenic | 10.0% |
!! | ATGTAAAAAAATATCTAATT+TGG | + | chr1_1:65708313-65708332 | None:intergenic | 10.0% |
!! | GATATATTATATAGTATTTA+TGG | - | chr1_1:65708500-65708519 | Msa0036880:CDS | 10.0% |
!! | AATAACTAAGTAAGAAAAAA+AGG | + | chr1_1:65708806-65708825 | None:intergenic | 15.0% |
!! | TAAGTATAATAAGATAGAAA+AGG | + | chr1_1:65711441-65711460 | None:intergenic | 15.0% |
!!! | TTTTGGAAAAATAATAAAAG+AGG | - | chr1_1:65713491-65713510 | Msa0036880:five_prime_UTR | 15.0% |
!! | ACTTAATTAAACAACAAACA+TGG | + | chr1_1:65708215-65708234 | None:intergenic | 20.0% |
!!! | TTGTTTGATGATTGTAATAA+TGG | - | chr1_1:65708895-65708914 | Msa0036880:intron | 20.0% |
!! | TCATAATTGTTAGTATTATG+AGG | - | chr1_1:65709193-65709212 | Msa0036880:CDS | 20.0% |
!!! | CTTTTTATTTATGAAGAACA+AGG | - | chr1_1:65710206-65710225 | Msa0036880:CDS | 20.0% |
!!! | TATGATTGATTTAAACTCAA+AGG | - | chr1_1:65711139-65711158 | Msa0036880:CDS | 20.0% |
!! | TTGAAAAACAAAGAAAAGAA+AGG | + | chr1_1:65711472-65711491 | None:intergenic | 20.0% |
!! | AATCAACAATTAAAATCCTA+AGG | + | chr1_1:65711496-65711515 | None:intergenic | 20.0% |
!! | AAGTATTAACTTATATGAGA+AGG | - | chr1_1:65712172-65712191 | Msa0036880:CDS | 20.0% |
!!! | TTCAAAATCCTTATTTAATC+TGG | - | chr1_1:65712820-65712839 | Msa0036880:intron | 20.0% |
!!! | GTATTTTACCAGATTAAATA+AGG | + | chr1_1:65712831-65712850 | None:intergenic | 20.0% |
!!! | TTCTTTCTAAAATCAATTCT+TGG | - | chr1_1:65713636-65713655 | Msa0036880:five_prime_UTR | 20.0% |
!!! | CTTTCTTTTAATTACAAAGA+GGG | - | chr1_1:65713662-65713681 | Msa0036880:five_prime_UTR | 20.0% |
! | ATATAGTATTTATGGCATGA+TGG | - | chr1_1:65708508-65708527 | Msa0036880:CDS | 25.0% |
! | GATCATGACAGTATAAAAAT+TGG | + | chr1_1:65709021-65709040 | None:intergenic | 25.0% |
! | CAAGATGACAAAATTATGTA+AGG | + | chr1_1:65709117-65709136 | None:intergenic | 25.0% |
!! | TTTGTCATCTTGAAAAGTAT+TGG | - | chr1_1:65709125-65709144 | Msa0036880:CDS | 25.0% |
! | TAATTGTTAGTATTATGAGG+AGG | - | chr1_1:65709196-65709215 | Msa0036880:CDS | 25.0% |
! | AATTGTTAGTATTATGAGGA+GGG | - | chr1_1:65709197-65709216 | Msa0036880:CDS | 25.0% |
! | GTGATGATTCTTATATGATT+TGG | - | chr1_1:65709292-65709311 | Msa0036880:CDS | 25.0% |
!! | AAAGTCTCTTTTTCTTTTGT+GGG | + | chr1_1:65710443-65710462 | None:intergenic | 25.0% |
! | ACAAAAGAAAAAGAGACTTT+GGG | - | chr1_1:65710443-65710462 | Msa0036880:CDS | 25.0% |
!! | ATTCTATTTCTTTGTTCACA+TGG | + | chr1_1:65710557-65710576 | None:intergenic | 25.0% |
! | TCACTAGATCCATTATATTA+GGG | + | chr1_1:65710677-65710696 | None:intergenic | 25.0% |
! | TTCACTAGATCCATTATATT+AGG | + | chr1_1:65710678-65710697 | None:intergenic | 25.0% |
! | TCTTGTATAGAAACAAGTTA+TGG | - | chr1_1:65710715-65710734 | Msa0036880:CDS | 25.0% |
! | AGAAACAAGTTATGGATATT+AGG | - | chr1_1:65710723-65710742 | Msa0036880:CDS | 25.0% |
! | AAACTTAATGATACTGTATG+TGG | - | chr1_1:65710864-65710883 | Msa0036880:CDS | 25.0% |
! | TAAATGATTTGAAGATCGAA+GGG | - | chr1_1:65711177-65711196 | Msa0036880:CDS | 25.0% |
! | TGTTCTCTTATAATGTAATC+AGG | - | chr1_1:65711517-65711536 | Msa0036880:CDS | 25.0% |
! | GCATTAACTATCAAACTAAT+AGG | + | chr1_1:65711604-65711623 | None:intergenic | 25.0% |
! | ATGTTAGAAACTGTTGTATT+TGG | + | chr1_1:65712445-65712464 | None:intergenic | 25.0% |
!! | TTTTCTTAGAATAGATGGAA+AGG | - | chr1_1:65713189-65713208 | Msa0036880:five_prime_UTR | 25.0% |
! | AAGTTGTTAAAGCTTATGAA+CGG | - | chr1_1:65713381-65713400 | Msa0036880:five_prime_UTR | 25.0% |
! | AAGTTCAACAGATAGAATAA+AGG | + | chr1_1:65713442-65713461 | None:intergenic | 25.0% |
!!! | ATTTTAACCTCTCAACTTTT+GGG | + | chr1_1:65713472-65713491 | None:intergenic | 25.0% |
!!! | AATTTTAACCTCTCAACTTT+TGG | + | chr1_1:65713473-65713492 | None:intergenic | 25.0% |
!! | AAGTTGAGAGGTTAAAATTT+TGG | - | chr1_1:65713474-65713493 | Msa0036880:five_prime_UTR | 25.0% |
! | CCTCTTTGTAATTAAAAGAA+AGG | + | chr1_1:65713664-65713683 | None:intergenic | 25.0% |
!!! | CCTTTCTTTTAATTACAAAG+AGG | - | chr1_1:65713661-65713680 | Msa0036880:five_prime_UTR | 25.0% |
AATATCTAATTTGGGCAAGT+GGG | + | chr1_1:65708304-65708323 | None:intergenic | 30.0% | |
AAATATCTAATTTGGGCAAG+TGG | + | chr1_1:65708305-65708324 | None:intergenic | 30.0% | |
!! | GAAATGAAGGTATTAGCTAA+GGG | + | chr1_1:65708722-65708741 | None:intergenic | 30.0% |
!! | AGAAATGAAGGTATTAGCTA+AGG | + | chr1_1:65708723-65708742 | None:intergenic | 30.0% |
AGAGTAACTACAAGAAATGA+AGG | + | chr1_1:65708735-65708754 | None:intergenic | 30.0% | |
TAACAAGTAACTAACCTTGT+TGG | + | chr1_1:65708783-65708802 | None:intergenic | 30.0% | |
! | ATGTGTTTCTGTCTTGTAAA+GGG | - | chr1_1:65708852-65708871 | Msa0036880:intron | 30.0% |
! | TATGATTTGGATTGACTTAG+TGG | - | chr1_1:65709305-65709324 | Msa0036880:CDS | 30.0% |
! | AAAACTTCATGCAACTTTTG+AGG | - | chr1_1:65709459-65709478 | Msa0036880:intron | 30.0% |
TACCTCAATACAATACAAAG+AGG | - | chr1_1:65709577-65709596 | Msa0036880:CDS | 30.0% | |
AAAGTCAATGATCAAACTAC+CGG | + | chr1_1:65709896-65709915 | None:intergenic | 30.0% | |
! | CAAGAAGTTTTTGAACTAAC+AGG | - | chr1_1:65710051-65710070 | Msa0036880:CDS | 30.0% |
CACACAAAGTCAAATCAAAT+GGG | + | chr1_1:65710290-65710309 | None:intergenic | 30.0% | |
! | CAAAGTCTCTTTTTCTTTTG+TGG | + | chr1_1:65710444-65710463 | None:intergenic | 30.0% |
CACAAAAGAAAAAGAGACTT+TGG | - | chr1_1:65710442-65710461 | Msa0036880:CDS | 30.0% | |
CAAAAGAAAAAGAGACTTTG+GGG | - | chr1_1:65710444-65710463 | Msa0036880:CDS | 30.0% | |
TATTTCTTTGTTCACATGGA+TGG | + | chr1_1:65710553-65710572 | None:intergenic | 30.0% | |
CTTTGTGATACAATACCTAA+GGG | + | chr1_1:65710654-65710673 | None:intergenic | 30.0% | |
ATCACAAAGCCCTAATATAA+TGG | - | chr1_1:65710665-65710684 | Msa0036880:CDS | 30.0% | |
! | AGATAAGAGAGATAGCTTTA+TGG | - | chr1_1:65710766-65710785 | Msa0036880:CDS | 30.0% |
TAATGATACTGTATGTGGAA+TGG | - | chr1_1:65710869-65710888 | Msa0036880:CDS | 30.0% | |
! | CTTCAAAAGACATAGTTTTC+TGG | - | chr1_1:65710907-65710926 | Msa0036880:CDS | 30.0% |
!!! | AAGACATAGTTTTCTGGTTT+AGG | - | chr1_1:65710913-65710932 | Msa0036880:CDS | 30.0% |
ATCAATCATATCCGTATCTT+TGG | + | chr1_1:65711129-65711148 | None:intergenic | 30.0% | |
CTAAATGATTTGAAGATCGA+AGG | - | chr1_1:65711176-65711195 | Msa0036880:CDS | 30.0% | |
!!! | TTCTTTGTTTTTCAAGCCTT+AGG | - | chr1_1:65711477-65711496 | Msa0036880:CDS | 30.0% |
AACTATCAAACTAATAGGAC+CGG | + | chr1_1:65711599-65711618 | None:intergenic | 30.0% | |
GATCTTCATGAAAATGTAGT+GGG | - | chr1_1:65711637-65711656 | Msa0036880:CDS | 30.0% | |
ATAGGAGGGATTAATTGATT+GGG | + | chr1_1:65711757-65711776 | None:intergenic | 30.0% | |
TATAGGAGGGATTAATTGAT+TGG | + | chr1_1:65711758-65711777 | None:intergenic | 30.0% | |
CAATTAATCCCTCCTATATT+CGG | - | chr1_1:65711760-65711779 | Msa0036880:CDS | 30.0% | |
CTATGATTAAGATAACTGGA+TGG | - | chr1_1:65711821-65711840 | Msa0036880:CDS | 30.0% | |
CAAGAAGCTTTCGTTAATTT+CGG | - | chr1_1:65711922-65711941 | Msa0036880:CDS | 30.0% | |
! | TTTTCTTACTCACAGAAAGT+AGG | + | chr1_1:65712035-65712054 | None:intergenic | 30.0% |
TGTGAGTAAGAAAATAGATG+CGG | - | chr1_1:65712041-65712060 | Msa0036880:CDS | 30.0% | |
! | TGTGTTTTCCAGTAAAATGT+TGG | - | chr1_1:65712221-65712240 | Msa0036880:CDS | 30.0% |
! | AGTATTCTCCAACATTTTAC+TGG | + | chr1_1:65712232-65712251 | None:intergenic | 30.0% |
!! | GTTCACAATTCGTTTTTGTT+CGG | + | chr1_1:65712265-65712284 | None:intergenic | 30.0% |
! | TAGCAAAATTCTTGATGACT+CGG | - | chr1_1:65712311-65712330 | Msa0036880:CDS | 30.0% |
!!! | TCTTCCATGTATGTTTTAAC+AGG | - | chr1_1:65712485-65712504 | Msa0036880:intron | 30.0% |
AGTACCTGTTAAAACATACA+TGG | + | chr1_1:65712492-65712511 | None:intergenic | 30.0% | |
!!! | TGTATGTTTTAACAGGTACT+TGG | - | chr1_1:65712492-65712511 | Msa0036880:intron | 30.0% |
TAACTGTTCTTTAGTTAGAG+TGG | + | chr1_1:65712743-65712762 | None:intergenic | 30.0% | |
ACTCTAACTAAAGAACAGTT+AGG | - | chr1_1:65712742-65712761 | Msa0036880:intron | 30.0% | |
CTCTAACTAAAGAACAGTTA+GGG | - | chr1_1:65712743-65712762 | Msa0036880:intron | 30.0% | |
ATCTGTCCATCTTGTAAATT+TGG | - | chr1_1:65712768-65712787 | Msa0036880:intron | 30.0% | |
!!! | GATTTTGAAATGCTTGAGTA+TGG | + | chr1_1:65712809-65712828 | None:intergenic | 30.0% |
TCTGTTAAGCTAGTTACTTA+TGG | + | chr1_1:65712945-65712964 | None:intergenic | 30.0% | |
ACAAGTTTCTTATGTTCCTA+AGG | + | chr1_1:65713063-65713082 | None:intergenic | 30.0% | |
! | CCATCTATTCTAAGAAAAGT+CGG | + | chr1_1:65713187-65713206 | None:intergenic | 30.0% |
! | TTTTTGTGTAGCATAACACA+TGG | - | chr1_1:65713267-65713286 | Msa0036880:five_prime_UTR | 30.0% |
AACCAGATGTTTGGAAATAA+TGG | - | chr1_1:65713318-65713337 | Msa0036880:five_prime_UTR | 30.0% | |
ACCAGATGTTTGGAAATAAT+GGG | - | chr1_1:65713319-65713338 | Msa0036880:five_prime_UTR | 30.0% | |
GTTCGATATTTAAAAGAAGC+TGG | - | chr1_1:65713408-65713427 | Msa0036880:five_prime_UTR | 30.0% | |
CAATGTAACTCTTATGTTTC+AGG | - | chr1_1:65713532-65713551 | Msa0036880:five_prime_UTR | 30.0% | |
TAAAAACAGCACCAAGTAGA+TGG | - | chr1_1:65708348-65708367 | Msa0036880:exon | 35.0% | |
! | CTATCAAAGTGTTAGTCTGT+TGG | - | chr1_1:65708392-65708411 | Msa0036880:CDS | 35.0% |
ATTCCTTTCCATCTTCACAT+GGG | - | chr1_1:65708461-65708480 | Msa0036880:CDS | 35.0% | |
TAGTATTTATGGCATGATGG+CGG | - | chr1_1:65708511-65708530 | Msa0036880:CDS | 35.0% | |
TGAATTATACTGACCTTGCT+TGG | - | chr1_1:65708559-65708578 | Msa0036880:intron | 35.0% | |
CTTGTTGGAAGGAAAAAACT+TGG | + | chr1_1:65708768-65708787 | None:intergenic | 35.0% | |
!!! | CAAGTTTTTTCCTTCCAACA+AGG | - | chr1_1:65708766-65708785 | Msa0036880:intron | 35.0% |
AAGTAACTAACCTTGTTGGA+AGG | + | chr1_1:65708779-65708798 | None:intergenic | 35.0% | |
! | CATGTGTTTCTGTCTTGTAA+AGG | - | chr1_1:65708851-65708870 | Msa0036880:intron | 35.0% |
!! | GGATTTGTTTCTGACTTGTT+TGG | - | chr1_1:65708916-65708935 | Msa0036880:intron | 35.0% |
! | TGTTGACTGTCTTCTATGAT+TGG | - | chr1_1:65709062-65709081 | Msa0036880:CDS | 35.0% |
GTTGACTGTCTTCTATGATT+GGG | - | chr1_1:65709063-65709082 | Msa0036880:CDS | 35.0% | |
!! | GTAAGCTGTTGTTACTTTGT+TGG | + | chr1_1:65709560-65709579 | None:intergenic | 35.0% |
TGCCTCTTTGTATTGTATTG+AGG | + | chr1_1:65709582-65709601 | None:intergenic | 35.0% | |
TCTTGCAATGAACAAGGATA+GGG | + | chr1_1:65709834-65709853 | None:intergenic | 35.0% | |
TTGTTCATTGCAAGACTTCT+GGG | - | chr1_1:65709839-65709858 | Msa0036880:intron | 35.0% | |
CGGTGAATAATCGCATAAAA+TGG | + | chr1_1:65709868-65709887 | None:intergenic | 35.0% | |
TTGAACTAACAGGTTATGAC+AGG | - | chr1_1:65710061-65710080 | Msa0036880:CDS | 35.0% | |
TGAACTAACAGGTTATGACA+GGG | - | chr1_1:65710062-65710081 | Msa0036880:CDS | 35.0% | |
GATGGCTTATAAATTTCACG+AGG | - | chr1_1:65710086-65710105 | Msa0036880:CDS | 35.0% | |
AAATTTCACGAGGATGATCA+TGG | - | chr1_1:65710096-65710115 | Msa0036880:CDS | 35.0% | |
AATTTCACGAGGATGATCAT+GGG | - | chr1_1:65710097-65710116 | Msa0036880:CDS | 35.0% | |
CGTGACAATCAACTATCATA+CGG | + | chr1_1:65710233-65710252 | None:intergenic | 35.0% | |
CCACACAAAGTCAAATCAAA+TGG | + | chr1_1:65710291-65710310 | None:intergenic | 35.0% | |
!! | CCATTTGATTTGACTTTGTG+TGG | - | chr1_1:65710288-65710307 | Msa0036880:CDS | 35.0% |
! | TAGTTGCCATTTGCAGTATA+TGG | - | chr1_1:65710332-65710351 | Msa0036880:intron | 35.0% |
TGTTAGCCATATACTGCAAA+TGG | + | chr1_1:65710341-65710360 | None:intergenic | 35.0% | |
TTTGCAGTATATGGCTAACA+TGG | - | chr1_1:65710341-65710360 | Msa0036880:intron | 35.0% | |
TTCAATTGCTTCCTTGGTTA+TGG | - | chr1_1:65710365-65710384 | Msa0036880:intron | 35.0% | |
TTTGTCATAACACTACACCA+AGG | - | chr1_1:65710475-65710494 | Msa0036880:CDS | 35.0% | |
AATTCACAAGCATACCTTAG+AGG | + | chr1_1:65710513-65710532 | None:intergenic | 35.0% | |
AAGGTATGCTTGTGAATTTC+TGG | - | chr1_1:65710515-65710534 | Msa0036880:CDS | 35.0% | |
GCTTTGTGATACAATACCTA+AGG | + | chr1_1:65710655-65710674 | None:intergenic | 35.0% | |
ATGGATCTAGTGAAATGTGA+TGG | - | chr1_1:65710684-65710703 | Msa0036880:CDS | 35.0% | |
TGGATCTAGTGAAATGTGAT+GGG | - | chr1_1:65710685-65710704 | Msa0036880:CDS | 35.0% | |
AAAGCTATCTCTCTTATCTG+AGG | + | chr1_1:65710765-65710784 | None:intergenic | 35.0% | |
AAAGCCTTGAATGATGATCT+TGG | + | chr1_1:65711017-65711036 | None:intergenic | 35.0% | |
! | ACCATGGAAAGACTTTGAAA+TGG | - | chr1_1:65711064-65711083 | Msa0036880:CDS | 35.0% |
TCCATTTCAAAGTCTTTCCA+TGG | + | chr1_1:65711068-65711087 | None:intergenic | 35.0% | |
! | ATCAAAATTTCCGAGTTGAC+AGG | - | chr1_1:65711305-65711324 | Msa0036880:CDS | 35.0% |
! | ACATTTACTCACACTTGTTG+AGG | - | chr1_1:65711355-65711374 | Msa0036880:CDS | 35.0% |
AGTCAAGAAGATGCTTAATC+TGG | - | chr1_1:65711394-65711413 | Msa0036880:CDS | 35.0% | |
CAATTCGAGATCAAAACACA+CGG | - | chr1_1:65711559-65711578 | Msa0036880:CDS | 35.0% | |
AATTCGAGATCAAAACACAC+GGG | - | chr1_1:65711560-65711579 | Msa0036880:CDS | 35.0% | |
GGATCTTCATGAAAATGTAG+TGG | - | chr1_1:65711636-65711655 | Msa0036880:CDS | 35.0% | |
CTTCTGAGCAGTTATATCTT+GGG | + | chr1_1:65711677-65711696 | None:intergenic | 35.0% | |
TCTTCTGAGCAGTTATATCT+TGG | + | chr1_1:65711678-65711697 | None:intergenic | 35.0% | |
CTTGTAATCTCCTTCAATTC+GGG | + | chr1_1:65711719-65711738 | None:intergenic | 35.0% | |
CCTTGTAATCTCCTTCAATT+CGG | + | chr1_1:65711720-65711739 | None:intergenic | 35.0% | |
TAGGAGGGATTAATTGATTG+GGG | + | chr1_1:65711756-65711775 | None:intergenic | 35.0% | |
AATTCATCTGTGCCGAATAT+AGG | + | chr1_1:65711775-65711794 | None:intergenic | 35.0% | |
ATATTCGGCACAGATGAATT+TGG | - | chr1_1:65711775-65711794 | Msa0036880:CDS | 35.0% | |
GCAGCTATGATTAAGATAAC+TGG | - | chr1_1:65711817-65711836 | Msa0036880:CDS | 35.0% | |
!! | GTGATGGATAAAATGCTTCT+AGG | - | chr1_1:65711856-65711875 | Msa0036880:CDS | 35.0% |
GTACTTAATAAAGCGATGAC+TGG | - | chr1_1:65711949-65711968 | Msa0036880:CDS | 35.0% | |
! | TAATAAAGCGATGACTGGTT+TGG | - | chr1_1:65711954-65711973 | Msa0036880:CDS | 35.0% |
! | GAAACAGAAAAGGTTCCTTT+TGG | - | chr1_1:65711976-65711995 | Msa0036880:CDS | 35.0% |
!!! | TTCCTTTTGGTTTTCTCTCT+CGG | - | chr1_1:65711989-65712008 | Msa0036880:CDS | 35.0% |
AGTAAGAAAATAGATGCGGA+GGG | - | chr1_1:65712045-65712064 | Msa0036880:CDS | 35.0% | |
CTTATATGAGAAGGCAAATC+AGG | - | chr1_1:65712181-65712200 | Msa0036880:CDS | 35.0% | |
AAATCAGGAATCCTTTGTCT+GGG | - | chr1_1:65712196-65712215 | Msa0036880:CDS | 35.0% | |
AATGTTGGAGAATACTGAGT+TGG | - | chr1_1:65712236-65712255 | Msa0036880:CDS | 35.0% | |
ATGTTGGAGAATACTGAGTT+GGG | - | chr1_1:65712237-65712256 | Msa0036880:CDS | 35.0% | |
! | CATCAAGAATTTTGCTAAGC+TGG | + | chr1_1:65712308-65712327 | None:intergenic | 35.0% |
ATCTAGACAGCATCATTGAT+GGG | - | chr1_1:65712334-65712353 | Msa0036880:CDS | 35.0% | |
ATTCATGACTTGACTAAGAG+AGG | + | chr1_1:65712560-65712579 | None:intergenic | 35.0% | |
CTCTTAGTCAAGTCATGAAT+AGG | - | chr1_1:65712560-65712579 | Msa0036880:intron | 35.0% | |
TCATGAATAGGAGTAACACA+AGG | - | chr1_1:65712572-65712591 | Msa0036880:intron | 35.0% | |
CCGCAACATCATTCATTATT+CGG | + | chr1_1:65712603-65712622 | None:intergenic | 35.0% | |
CCGAATAATGAATGATGTTG+CGG | - | chr1_1:65712600-65712619 | Msa0036880:intron | 35.0% | |
! | TCTAAGACTATCACCATACA+AGG | + | chr1_1:65712644-65712663 | None:intergenic | 35.0% |
TGAGCTCCAAATTTACAAGA+TGG | + | chr1_1:65712777-65712796 | None:intergenic | 35.0% | |
! | ATCTTGTAAATTTGGAGCTC+AGG | - | chr1_1:65712776-65712795 | Msa0036880:intron | 35.0% |
! | CCGACTTTTCTTAGAATAGA+TGG | - | chr1_1:65713184-65713203 | Msa0036880:five_prime_UTR | 35.0% |
ACAACTTTCTACTGATGTGT+AGG | + | chr1_1:65713368-65713387 | None:intergenic | 35.0% | |
AGAAGAAGGAAGGAAAGTCA+AGG | - | chr1_1:65708167-65708186 | Msa0036880:three_prime_UTR | 40.0% | |
CATTCCTTTCCATCTTCACA+TGG | - | chr1_1:65708460-65708479 | Msa0036880:CDS | 40.0% | |
TTCCTTTCCATCTTCACATG+GGG | - | chr1_1:65708462-65708481 | Msa0036880:CDS | 40.0% | |
CACACAATTGTGACTGAGAA+GGG | + | chr1_1:65708538-65708557 | None:intergenic | 40.0% | |
TTATACTGACCTTGCTTGGT+TGG | - | chr1_1:65708563-65708582 | Msa0036880:intron | 40.0% | |
GTATGGTAGTCACACACAAT+TGG | - | chr1_1:65708687-65708706 | Msa0036880:intron | 40.0% | |
! | GAATTGTTGGATGATTGGCT+AGG | + | chr1_1:65709388-65709407 | None:intergenic | 40.0% |
AGCCAATCATCCAACAATTC+AGG | - | chr1_1:65709388-65709407 | Msa0036880:intron | 40.0% | |
GCCAATCATCCAACAATTCA+GGG | - | chr1_1:65709389-65709408 | Msa0036880:intron | 40.0% | |
TCCCTGAATTGTTGGATGAT+TGG | + | chr1_1:65709393-65709412 | None:intergenic | 40.0% | |
TCTTGATCTCCCTGAATTGT+TGG | + | chr1_1:65709401-65709420 | None:intergenic | 40.0% | |
GGAGATCAAGAAATAGTGCT+AGG | - | chr1_1:65709410-65709429 | Msa0036880:intron | 40.0% | |
TTCCTTTGACTACTCGAGTT+CGG | - | chr1_1:65709492-65709511 | Msa0036880:intron | 40.0% | |
!! | GTTGTTACTTTGTTGGACCT+TGG | + | chr1_1:65709553-65709572 | None:intergenic | 40.0% |
AAAGCTAGCAAGCAACCAAA+AGG | + | chr1_1:65709616-65709635 | None:intergenic | 40.0% | |
TTTAGACGAGAAAACGTGCA+AGG | - | chr1_1:65709633-65709652 | Msa0036880:CDS | 40.0% | |
TATGTCAGTTCCAATGCCAA+GGG | + | chr1_1:65709737-65709756 | None:intergenic | 40.0% | |
TTATGTCAGTTCCAATGCCA+AGG | + | chr1_1:65709738-65709757 | None:intergenic | 40.0% | |
!! | ACAAAAGGCACTAGGATTTG+CGG | - | chr1_1:65709792-65709811 | Msa0036880:intron | 40.0% |
GTCTTGCAATGAACAAGGAT+AGG | + | chr1_1:65709835-65709854 | None:intergenic | 40.0% | |
CAGAAGTCTTGCAATGAACA+AGG | + | chr1_1:65709840-65709859 | None:intergenic | 40.0% | |
CTTGTTCATTGCAAGACTTC+TGG | - | chr1_1:65709838-65709857 | Msa0036880:intron | 40.0% | |
TGATCAAACTACCGGTAACA+CGG | + | chr1_1:65709888-65709907 | None:intergenic | 40.0% | |
AGATTGCAATCTTTGCCTAG+TGG | - | chr1_1:65709997-65710016 | Msa0036880:CDS | 40.0% | |
ATTTCACGAGGATGATCATG+GGG | - | chr1_1:65710098-65710117 | Msa0036880:CDS | 40.0% | |
ATTGCTGAGGTAACAAAGAC+AGG | - | chr1_1:65710126-65710145 | Msa0036880:CDS | 40.0% | |
ATATCTGGGTTTGCACTATC+CGG | - | chr1_1:65710158-65710177 | Msa0036880:CDS | 40.0% | |
TTGTCACGCAAAACATGTGA+AGG | - | chr1_1:65710245-65710264 | Msa0036880:CDS | 40.0% | |
TTTGTGTGGTTCGACCTTAA+GGG | - | chr1_1:65710302-65710321 | Msa0036880:intron | 40.0% | |
ACTGCAAATGGCAACTATGT+GGG | + | chr1_1:65710329-65710348 | None:intergenic | 40.0% | |
TACTGCAAATGGCAACTATG+TGG | + | chr1_1:65710330-65710349 | None:intergenic | 40.0% | |
CATGGATTCAATTGCTTCCT+TGG | - | chr1_1:65710359-65710378 | Msa0036880:intron | 40.0% | |
!! | GAAAAAGAGACTTTGGGGTT+TGG | - | chr1_1:65710449-65710468 | Msa0036880:CDS | 40.0% |
CAAGCATACCTTAGAGGAAA+GGG | + | chr1_1:65710507-65710526 | None:intergenic | 40.0% | |
ACAAGCATACCTTAGAGGAA+AGG | + | chr1_1:65710508-65710527 | None:intergenic | 40.0% | |
GGATCTAGTGAAATGTGATG+GGG | - | chr1_1:65710686-65710705 | Msa0036880:CDS | 40.0% | |
! | TCTCTTATCTGAGGTTCACT+CGG | + | chr1_1:65710756-65710775 | None:intergenic | 40.0% |
AGTCGAATCTGTATGGTACT+CGG | + | chr1_1:65710796-65710815 | None:intergenic | 40.0% | |
TCAAACCAGTCGAATCTGTA+TGG | + | chr1_1:65710803-65710822 | None:intergenic | 40.0% | |
!! | AGATTCGACTGGTTTGAGTA+CGG | - | chr1_1:65710806-65710825 | Msa0036880:CDS | 40.0% |
TCATTAAGTTTAAGAGCCCC+TGG | + | chr1_1:65710855-65710874 | None:intergenic | 40.0% | |
GCATCCAAGATCATCATTCA+AGG | - | chr1_1:65711010-65711029 | Msa0036880:CDS | 40.0% | |
GAGAAACGCATCCAAAGATA+CGG | - | chr1_1:65711115-65711134 | Msa0036880:CDS | 40.0% | |
! | AACAGCAACAGTGCCTATTT+TGG | - | chr1_1:65711247-65711266 | Msa0036880:CDS | 40.0% |
TCAACATCCACTGCCAAAAT+AGG | + | chr1_1:65711263-65711282 | None:intergenic | 40.0% | |
!! | ATTTTGGCAGTGGATGTTGA+TGG | - | chr1_1:65711263-65711282 | Msa0036880:CDS | 40.0% |
! | TTTTGGCAGTGGATGTTGAT+GGG | - | chr1_1:65711264-65711283 | Msa0036880:CDS | 40.0% |
!!! | TGTAGTGGGAGTTTGTTTTG+TGG | - | chr1_1:65711651-65711670 | Msa0036880:CDS | 40.0% |
GACAAATTCACCCGAATTGA+AGG | - | chr1_1:65711706-65711725 | Msa0036880:CDS | 40.0% | |
CCGAATTGAAGGAGATTACA+AGG | - | chr1_1:65711717-65711736 | Msa0036880:CDS | 40.0% | |
! | GGATAAAATGCTTCTAGGAG+AGG | - | chr1_1:65711861-65711880 | Msa0036880:CDS | 40.0% |
!! | ATGCTTCTAGGAGAGGTTTT+CGG | - | chr1_1:65711868-65711887 | Msa0036880:CDS | 40.0% |
!! | GACTGGTTTGGAAACAGAAA+AGG | - | chr1_1:65711966-65711985 | Msa0036880:CDS | 40.0% |
TTCCGAGAGAGAAAACCAAA+AGG | + | chr1_1:65711994-65712013 | None:intergenic | 40.0% | |
!!! | TTTTGGTTTTCTCTCTCGGA+AGG | - | chr1_1:65711993-65712012 | Msa0036880:CDS | 40.0% |
!!! | TTTGGTTTTCTCTCTCGGAA+GGG | - | chr1_1:65711994-65712013 | Msa0036880:CDS | 40.0% |
GAGTAAGAAAATAGATGCGG+AGG | - | chr1_1:65712044-65712063 | Msa0036880:CDS | 40.0% | |
TACTTTCAGTCTCTTGAGAG+CGG | + | chr1_1:65712157-65712176 | None:intergenic | 40.0% | |
CAAATCAGGAATCCTTTGTC+TGG | - | chr1_1:65712195-65712214 | Msa0036880:CDS | 40.0% | |
GAAAACACAATCCCAGACAA+AGG | + | chr1_1:65712210-65712229 | None:intergenic | 40.0% | |
GATCTAGACAGCATCATTGA+TGG | - | chr1_1:65712333-65712352 | Msa0036880:CDS | 40.0% | |
AACTCTTCCTTGCATTCATG+TGG | - | chr1_1:65712399-65712418 | Msa0036880:CDS | 40.0% | |
TTTCACACCACATGAATGCA+AGG | + | chr1_1:65712409-65712428 | None:intergenic | 40.0% | |
GTGGTGTGAAATTTGAACAC+AGG | - | chr1_1:65712418-65712437 | Msa0036880:CDS | 40.0% | |
! | TGATAGTCTTAGACTTCAGC+AGG | - | chr1_1:65712651-65712670 | Msa0036880:intron | 40.0% |
TCCATCAATTCCACACCAAA+TGG | - | chr1_1:65712697-65712716 | Msa0036880:intron | 40.0% | |
!! | TCCATTTGGTGTGGAATTGA+TGG | + | chr1_1:65712701-65712720 | None:intergenic | 40.0% |
ATCAATTCCACACCAAATGG+AGG | - | chr1_1:65712700-65712719 | Msa0036880:intron | 40.0% | |
ATAACAACCTGACCTCCATT+TGG | + | chr1_1:65712715-65712734 | None:intergenic | 40.0% | |
TATTGCACTGGATACTTGCT+AGG | + | chr1_1:65713097-65713116 | None:intergenic | 40.0% | |
GTCGGTCTGATATTGATATG+TGG | + | chr1_1:65713169-65713188 | None:intergenic | 40.0% | |
TTGTGTAGCATAACACATGG+TGG | - | chr1_1:65713270-65713289 | Msa0036880:five_prime_UTR | 40.0% | |
! | AGCATAACACATGGTGGAAA+TGG | - | chr1_1:65713276-65713295 | Msa0036880:five_prime_UTR | 40.0% |
! | GCATAACACATGGTGGAAAT+GGG | - | chr1_1:65713277-65713296 | Msa0036880:five_prime_UTR | 40.0% |
! | CATAACACATGGTGGAAATG+GGG | - | chr1_1:65713278-65713297 | Msa0036880:five_prime_UTR | 40.0% |
GCCCATTATTTCCAAACATC+TGG | + | chr1_1:65713323-65713342 | None:intergenic | 40.0% | |
!! | TAATGGGCTAGAATCAGAAG+AGG | - | chr1_1:65713335-65713354 | Msa0036880:five_prime_UTR | 40.0% |
!! | AATGGGCTAGAATCAGAAGA+GGG | - | chr1_1:65713336-65713355 | Msa0036880:five_prime_UTR | 40.0% |
CGAAAAGCTTGACTGAGAAT+AGG | + | chr1_1:65713611-65713630 | None:intergenic | 40.0% | |
! | CTAATTTGGGCAAGTGGGTT+TGG | + | chr1_1:65708299-65708318 | None:intergenic | 45.0% |
TCCTTTCCATCTTCACATGG+GGG | - | chr1_1:65708463-65708482 | Msa0036880:CDS | 45.0% | |
GCACACAATTGTGACTGAGA+AGG | + | chr1_1:65708539-65708558 | None:intergenic | 45.0% | |
! | ACCTTGCTTGGTTGGAGTTT+TGG | - | chr1_1:65708571-65708590 | Msa0036880:intron | 45.0% |
TCCAAAACTCCAACCAAGCA+AGG | + | chr1_1:65708575-65708594 | None:intergenic | 45.0% | |
!!! | TGGTTGGAGTTTTGGAGTAG+AGG | - | chr1_1:65708579-65708598 | Msa0036880:intron | 45.0% |
GTGATAAAATGTCGACCACG+AGG | - | chr1_1:65709362-65709381 | Msa0036880:intron | 45.0% | |
!! | CATGCAACTTTTGAGGAGTC+TGG | - | chr1_1:65709466-65709485 | Msa0036880:intron | 45.0% |
!! | TTGATGGAGAGCATCAACCA+AGG | - | chr1_1:65709533-65709552 | Msa0036880:CDS | 45.0% |
TGCATACAGTGAGAATGCAC+CGG | - | chr1_1:65709660-65709679 | Msa0036880:CDS | 45.0% | |
!!! | TTTTGTAGCGCAGAAGCACT+CGG | + | chr1_1:65709778-65709797 | None:intergenic | 45.0% |
GCGATTATTCACCGTGTTAC+CGG | - | chr1_1:65709874-65709893 | Msa0036880:CDS | 45.0% | |
GGAACTTCATAAGGCTTCAC+TGG | + | chr1_1:65709922-65709941 | None:intergenic | 45.0% | |
GCAGTCATGGGAACTTCATA+AGG | + | chr1_1:65709931-65709950 | None:intergenic | 45.0% | |
GGAAAGGCTTTGCGATACAA+TGG | - | chr1_1:65710026-65710045 | Msa0036880:CDS | 45.0% | |
AACAGGTTATGACAGGGTGA+TGG | - | chr1_1:65710068-65710087 | Msa0036880:CDS | 45.0% | |
! | ACAGGTCTAGAGCCATATCT+GGG | - | chr1_1:65710144-65710163 | Msa0036880:CDS | 45.0% |
GGATAGTGCAAACCCAGATA+TGG | + | chr1_1:65710159-65710178 | None:intergenic | 45.0% | |
! | AAATAAAAAGCGCGCAGCCT+GGG | + | chr1_1:65710196-65710215 | None:intergenic | 45.0% |
! | TAAATAAAAAGCGCGCAGCC+TGG | + | chr1_1:65710197-65710216 | None:intergenic | 45.0% |
CTTTGTGTGGTTCGACCTTA+AGG | - | chr1_1:65710301-65710320 | Msa0036880:intron | 45.0% | |
CTGCAAATGGCAACTATGTG+GGG | + | chr1_1:65710328-65710347 | None:intergenic | 45.0% | |
GACTACTACAGCCATAACCA+AGG | + | chr1_1:65710379-65710398 | None:intergenic | 45.0% | |
GTCAATGACAGCGATGAAGA+TGG | - | chr1_1:65710396-65710415 | Msa0036880:intron | 45.0% | |
AGAGGAAAGGGAACAAACCT+TGG | + | chr1_1:65710495-65710514 | None:intergenic | 45.0% | |
! | GGTTTGTTCCCTTTCCTCTA+AGG | - | chr1_1:65710496-65710515 | Msa0036880:CDS | 45.0% |
GAGTACCATACAGATTCGAC+TGG | - | chr1_1:65710795-65710814 | Msa0036880:CDS | 45.0% | |
TTTGAAGATCGAAGGGATGC+AGG | - | chr1_1:65711184-65711203 | Msa0036880:CDS | 45.0% | |
!!! | AACAGTGCCTATTTTGGCAG+TGG | - | chr1_1:65711253-65711272 | Msa0036880:CDS | 45.0% |
! | GATGTTGATGGGATGGTCAA+TGG | - | chr1_1:65711275-65711294 | Msa0036880:CDS | 45.0% |
TTGATGGGATGGTCAATGGT+TGG | - | chr1_1:65711279-65711298 | Msa0036880:CDS | 45.0% | |
TTTCCAATAGCTTCGCCAAC+CGG | + | chr1_1:65711335-65711354 | None:intergenic | 45.0% | |
ATGCTTAATCTGGCACTGCA+GGG | - | chr1_1:65711404-65711423 | Msa0036880:CDS | 45.0% | |
CAAAACACACGGGTCTAAGA+CGG | - | chr1_1:65711570-65711589 | Msa0036880:CDS | 45.0% | |
TAGTTAATGCGTGTGCAAGC+AGG | - | chr1_1:65711614-65711633 | Msa0036880:CDS | 45.0% | |
AGTTAATGCGTGTGCAAGCA+GGG | - | chr1_1:65711615-65711634 | Msa0036880:CDS | 45.0% | |
AACTGCTCAGAAGACAGTCA+TGG | - | chr1_1:65711684-65711703 | Msa0036880:CDS | 45.0% | |
CATCTGTGCCGAATATAGGA+GGG | + | chr1_1:65711771-65711790 | None:intergenic | 45.0% | |
TCATCTGTGCCGAATATAGG+AGG | + | chr1_1:65711772-65711791 | None:intergenic | 45.0% | |
!! | AATTTGGCTGGTGTTGTGAG+TGG | - | chr1_1:65711791-65711810 | Msa0036880:CDS | 45.0% |
CTGCAAAAAACAGAAGACCC+CGG | + | chr1_1:65712079-65712098 | None:intergenic | 45.0% | |
!!! | TTTTTTGCAGCTAGCTAGCC+CGG | - | chr1_1:65712089-65712108 | Msa0036880:CDS | 45.0% |
! | TGAGAGCGGTTTGTTCAGAT+AGG | + | chr1_1:65712143-65712162 | None:intergenic | 45.0% |
ATTCACTCTGCATGAGGTAC+TGG | - | chr1_1:65712531-65712550 | Msa0036880:intron | 45.0% | |
ATCGCGATGGAAACCTTGTA+TGG | - | chr1_1:65712628-65712647 | Msa0036880:intron | 45.0% | |
TCTTAGACTTCAGCAGGTCT+TGG | - | chr1_1:65712657-65712676 | Msa0036880:intron | 45.0% | |
TAAGCTATCTGAGCTCTGCA+TGG | + | chr1_1:65712905-65712924 | None:intergenic | 45.0% | |
! | ACACCTAGTTCTCTTGTGCT+AGG | - | chr1_1:65713031-65713050 | Msa0036880:intron | 45.0% |
TGTCCTAGCACAAGAGAACT+AGG | + | chr1_1:65713037-65713056 | None:intergenic | 45.0% | |
TTGTGCTAGGACACTACCTT+AGG | - | chr1_1:65713044-65713063 | Msa0036880:intron | 45.0% | |
TGCAATATTGCACAGACGCA+GGG | - | chr1_1:65713110-65713129 | Msa0036880:five_prime_UTR | 45.0% | |
GCTTGACTGAGAATAGGTGA+AGG | + | chr1_1:65713605-65713624 | None:intergenic | 45.0% | |
!!! | TATAATATATCAATTTTTTA+TGG | + | chr1_1:65708491-65708510 | None:intergenic | 5.0% |
!!! | TTTTTTTTTTTTTTTTGAAA+CGG | - | chr1_1:65709154-65709173 | Msa0036880:CDS | 5.0% |
CACAGCAGCATCCATCTACT+TGG | + | chr1_1:65708362-65708381 | None:intergenic | 50.0% | |
ACCCCCATGTGAAGATGGAA+AGG | + | chr1_1:65708467-65708486 | None:intergenic | 50.0% | |
ATGGTACCCCCATGTGAAGA+TGG | + | chr1_1:65708472-65708491 | None:intergenic | 50.0% | |
CACCGAACTCGAGTAGTCAA+AGG | + | chr1_1:65709497-65709516 | None:intergenic | 50.0% | |
! | CGTGTCTCTGGTTCAGTTGA+TGG | - | chr1_1:65709517-65709536 | Msa0036880:CDS | 50.0% |
CTAGCAAGCAACCAAAAGGC+TGG | + | chr1_1:65709612-65709631 | None:intergenic | 50.0% | |
CTCACCATGGTCAGCATTTC+CGG | + | chr1_1:65709682-65709701 | None:intergenic | 50.0% | |
AGTCATGCTGTCCCTAGTGT+CGG | - | chr1_1:65709700-65709719 | Msa0036880:CDS | 50.0% | |
GAGTGCTTCTGCGCTACAAA+AGG | - | chr1_1:65709777-65709796 | Msa0036880:intron | 50.0% | |
!! | TCTGCGCTACAAAAGGCACT+AGG | - | chr1_1:65709784-65709803 | Msa0036880:intron | 50.0% |
!! | AAAGGCACTAGGATTTGCGG+AGG | - | chr1_1:65709795-65709814 | Msa0036880:intron | 50.0% |
ATCTTTGCCTAGTGGCAGCA+TGG | - | chr1_1:65710005-65710024 | Msa0036880:CDS | 50.0% | |
! | GACAGGTCTAGAGCCATATC+TGG | - | chr1_1:65710143-65710162 | Msa0036880:CDS | 50.0% |
! | AATAAAAAGCGCGCAGCCTG+GGG | + | chr1_1:65710195-65710214 | None:intergenic | 50.0% |
! | ACGGATAGCTTGTCTGATGC+AGG | - | chr1_1:65710825-65710844 | Msa0036880:CDS | 50.0% |
! | CGGATAGCTTGTCTGATGCA+GGG | - | chr1_1:65710826-65710845 | Msa0036880:CDS | 50.0% |
TTGTCTGATGCAGGGTTTCC+AGG | - | chr1_1:65710834-65710853 | Msa0036880:CDS | 50.0% | |
TGTCTGATGCAGGGTTTCCA+GGG | - | chr1_1:65710835-65710854 | Msa0036880:CDS | 50.0% | |
ACACTGCTGCAGAAATCCGA+TGG | - | chr1_1:65710940-65710959 | Msa0036880:CDS | 50.0% | |
CACTGCTGCAGAAATCCGAT+GGG | - | chr1_1:65710941-65710960 | Msa0036880:CDS | 50.0% | |
ACTGCTGCAGAAATCCGATG+GGG | - | chr1_1:65710942-65710961 | Msa0036880:CDS | 50.0% | |
AAAGCATGAACCTGGCGAAC+AGG | - | chr1_1:65710971-65710990 | Msa0036880:CDS | 50.0% | |
GGCTTTCCTCGAAGTTGTGA+AGG | - | chr1_1:65711031-65711050 | Msa0036880:CDS | 50.0% | |
TCCTCGAAGTTGTGAAGGCT+AGG | - | chr1_1:65711036-65711055 | Msa0036880:CDS | 50.0% | |
! | TCCTAGCCTTCACAACTTCG+AGG | + | chr1_1:65711040-65711059 | None:intergenic | 50.0% |
! | TGAAGGCTAGGAGCATACCA+TGG | - | chr1_1:65711048-65711067 | Msa0036880:CDS | 50.0% |
GATCGAAGGGATGCAGGAAT+TGG | - | chr1_1:65711190-65711209 | Msa0036880:CDS | 50.0% | |
CAGTGACGAGTGAGATGGTT+CGG | - | chr1_1:65711216-65711235 | Msa0036880:CDS | 50.0% | |
! | TTCCGAGTTGACAGGTCTTC+CGG | - | chr1_1:65711313-65711332 | Msa0036880:CDS | 50.0% |
AACCGGAAGACCTGTCAACT+CGG | + | chr1_1:65711318-65711337 | None:intergenic | 50.0% | |
GATGCTTAATCTGGCACTGC+AGG | - | chr1_1:65711403-65711422 | Msa0036880:CDS | 50.0% | |
TCGGCACAGATGAATTTGGC+TGG | - | chr1_1:65711779-65711798 | Msa0036880:CDS | 50.0% | |
GATAACTGGATGGAAGCGAG+AGG | - | chr1_1:65711831-65711850 | Msa0036880:CDS | 50.0% | |
AACAGAAGACCCCGGTAACT+AGG | + | chr1_1:65712071-65712090 | None:intergenic | 50.0% | |
! | TGTAACGCTTGTTGCAGCTC+CGG | + | chr1_1:65712111-65712130 | None:intergenic | 50.0% |
! | GAATTTTGCTAAGCTGGCGC+TGG | + | chr1_1:65712302-65712321 | None:intergenic | 50.0% |
CAGGTACTTGGATCTCGAGA+TGG | - | chr1_1:65712504-65712523 | Msa0036880:intron | 50.0% | |
GGCTGAATTCACTCTGCATG+AGG | - | chr1_1:65712525-65712544 | Msa0036880:intron | 50.0% | |
TTCCACACCAAATGGAGGTC+AGG | - | chr1_1:65712705-65712724 | Msa0036880:intron | 50.0% | |
! | AACCTGACCTCCATTTGGTG+TGG | + | chr1_1:65712710-65712729 | None:intergenic | 50.0% |
GCGTCTGTGCAATATTGCAC+TGG | + | chr1_1:65713109-65713128 | None:intergenic | 50.0% | |
GTGCAATATTGCACAGACGC+AGG | - | chr1_1:65713109-65713128 | Msa0036880:five_prime_UTR | 50.0% | |
! | AACACATGGTGGAAATGGGG+TGG | - | chr1_1:65713281-65713300 | Msa0036880:five_prime_UTR | 50.0% |
! | GCAGTGCTGAACCAGATGTT+TGG | - | chr1_1:65713309-65713328 | Msa0036880:five_prime_UTR | 50.0% |
! | TTTGGAGTAGAGGCTCCAGC+TGG | - | chr1_1:65708589-65708608 | Msa0036880:intron | 55.0% |
TTGGAGTAGAGGCTCCAGCT+GGG | - | chr1_1:65708590-65708609 | Msa0036880:intron | 55.0% | |
TTGTTTGTCTCCCACCCAGC+TGG | + | chr1_1:65708607-65708626 | None:intergenic | 55.0% | |
AGCTGGGTGGGAGACAAACA+AGG | - | chr1_1:65708606-65708625 | Msa0036880:intron | 55.0% | |
GCTGGGTGGGAGACAAACAA+GGG | - | chr1_1:65708607-65708626 | Msa0036880:intron | 55.0% | |
TGCAGGTGCAGGGTATGGTA+TGG | - | chr1_1:65708670-65708689 | Msa0036880:intron | 55.0% | |
! | GGCAAGCAGATCCAGCCTTT+TGG | - | chr1_1:65709598-65709617 | Msa0036880:CDS | 55.0% |
TGCACCGGAAATGCTGACCA+TGG | - | chr1_1:65709675-65709694 | Msa0036880:CDS | 55.0% | |
AGGGACAGCATGACTCACCA+TGG | + | chr1_1:65709695-65709714 | None:intergenic | 55.0% | |
CAGTTCCAATGCCAAGGGCA+GGG | + | chr1_1:65709732-65709751 | None:intergenic | 55.0% | |
TCAGTTCCAATGCCAAGGGC+AGG | + | chr1_1:65709733-65709752 | None:intergenic | 55.0% | |
GAAGTTCCCATGACTGCAGC+AGG | - | chr1_1:65709934-65709953 | Msa0036880:CDS | 55.0% | |
AATGCGCCTGCTGCAGTCAT+GGG | + | chr1_1:65709943-65709962 | None:intergenic | 55.0% | |
TAATGCGCCTGCTGCAGTCA+TGG | + | chr1_1:65709944-65709963 | None:intergenic | 55.0% | |
TGCCTAGTGGCAGCATGGAA+AGG | - | chr1_1:65710010-65710029 | Msa0036880:CDS | 55.0% | |
AGCCTTTCCATGCTGCCACT+AGG | + | chr1_1:65710015-65710034 | None:intergenic | 55.0% | |
TCACGAGGATGATCATGGGG+AGG | - | chr1_1:65710101-65710120 | Msa0036880:CDS | 55.0% | |
TCATGGGGAGGTGATTGCTG+AGG | - | chr1_1:65710113-65710132 | Msa0036880:CDS | 55.0% | |
GCAACTATGTGGGGCCCTTA+AGG | + | chr1_1:65710319-65710338 | None:intergenic | 55.0% | |
CTGATGCGAGATGCACCCTT+AGG | - | chr1_1:65710636-65710655 | Msa0036880:CDS | 55.0% | |
GTCTGATGCAGGGTTTCCAG+GGG | - | chr1_1:65710836-65710855 | Msa0036880:CDS | 55.0% | |
CATGCTTTGCACCACCCCAT+CGG | + | chr1_1:65710959-65710978 | None:intergenic | 55.0% | |
GGTGGTGCAAAGCATGAACC+TGG | - | chr1_1:65710963-65710982 | Msa0036880:CDS | 55.0% | |
GAACCTGGCGAACAGGATGA+TGG | - | chr1_1:65710978-65710997 | Msa0036880:CDS | 55.0% | |
CTACCATCATCCTGTTCGCC+AGG | + | chr1_1:65710984-65711003 | None:intergenic | 55.0% | |
! | CTGGCGAACAGGATGATGGT+AGG | - | chr1_1:65710982-65711001 | Msa0036880:CDS | 55.0% |
GGAAGCAGTGACGAGTGAGA+TGG | - | chr1_1:65711211-65711230 | Msa0036880:CDS | 55.0% | |
! | GGCAGTGGATGTTGATGGGA+TGG | - | chr1_1:65711268-65711287 | Msa0036880:CDS | 55.0% |
GAGTTGACAGGTCTTCCGGT+TGG | - | chr1_1:65711317-65711336 | Msa0036880:CDS | 55.0% | |
CTTCCGGTTGGCGAAGCTAT+TGG | - | chr1_1:65711329-65711348 | Msa0036880:CDS | 55.0% | |
! | CACGGGTCTAAGACGGATTC+CGG | - | chr1_1:65711577-65711596 | Msa0036880:CDS | 55.0% |
AACTGGATGGAAGCGAGAGG+AGG | - | chr1_1:65711834-65711853 | Msa0036880:CDS | 55.0% | |
ATGGAAGCGAGAGGAGGTGA+TGG | - | chr1_1:65711840-65711859 | Msa0036880:CDS | 55.0% | |
! | GTAACGCTTGTTGCAGCTCC+GGG | + | chr1_1:65712110-65712129 | None:intergenic | 55.0% |
TGTTGCGGAGCATATCGCGA+TGG | - | chr1_1:65712615-65712634 | Msa0036880:intron | 55.0% | |
GCAGCAGCCCAAAAGTTGAG+AGG | - | chr1_1:65713462-65713481 | Msa0036880:five_prime_UTR | 55.0% | |
AGTAGAGGCTCCAGCTGGGT+GGG | - | chr1_1:65708594-65708613 | Msa0036880:intron | 60.0% | |
GGGTGGGAGACAAACAAGGG+CGG | - | chr1_1:65708610-65708629 | Msa0036880:intron | 60.0% | |
TGGGAGACAAACAAGGGCGG+TGG | - | chr1_1:65708613-65708632 | Msa0036880:intron | 60.0% | |
CTGCTGATGCTGCAGGTGCA+GGG | - | chr1_1:65708660-65708679 | Msa0036880:intron | 60.0% | |
GATGCTGCAGGTGCAGGGTA+TGG | - | chr1_1:65708665-65708684 | Msa0036880:intron | 60.0% | |
! | GGATGATTGGCTAGGCCTCG+TGG | + | chr1_1:65709380-65709399 | None:intergenic | 60.0% |
!! | TCGAGTTCGGTGCGTGTCTC+TGG | - | chr1_1:65709505-65709524 | Msa0036880:CDS | 60.0% |
CAGGGTGGTCACCGACACTA+GGG | + | chr1_1:65709714-65709733 | None:intergenic | 60.0% | |
TTCCAATGCCAAGGGCAGGG+TGG | + | chr1_1:65709729-65709748 | None:intergenic | 60.0% | |
!! | TAGCGCAGAAGCACTCGGTG+CGG | + | chr1_1:65709773-65709792 | None:intergenic | 60.0% |
TCCGGCCACAGATATTCCCC+AGG | - | chr1_1:65710176-65710195 | Msa0036880:CDS | 60.0% | |
GCCTGGGGAATATCTGTGGC+CGG | + | chr1_1:65710180-65710199 | None:intergenic | 60.0% | |
CGCAGCCTGGGGAATATCTG+TGG | + | chr1_1:65710184-65710203 | None:intergenic | 60.0% | |
ACAACAGTGTCTGCGTGCGC+AGG | + | chr1_1:65710608-65710627 | None:intergenic | 60.0% | |
GCTGCAGAAATCCGATGGGG+TGG | - | chr1_1:65710945-65710964 | Msa0036880:CDS | 60.0% | |
GATGCGGAGGGCCTAGTTAC+CGG | - | chr1_1:65712057-65712076 | Msa0036880:CDS | 60.0% | |
ATGCGGAGGGCCTAGTTACC+GGG | - | chr1_1:65712058-65712077 | Msa0036880:CDS | 60.0% | |
GAGTAGAGGCTCCAGCTGGG+TGG | - | chr1_1:65708593-65708612 | Msa0036880:intron | 65.0% | |
CAGCAGCAGCAGCAGCAAGC+TGG | + | chr1_1:65708643-65708662 | None:intergenic | 65.0% | |
GCTGCTGCTGCTGATGCTGC+AGG | - | chr1_1:65708653-65708672 | Msa0036880:intron | 65.0% | |
GCTGCTGATGCTGCAGGTGC+AGG | - | chr1_1:65708659-65708678 | Msa0036880:intron | 65.0% | |
GCAGGGTGGTCACCGACACT+AGG | + | chr1_1:65709715-65709734 | None:intergenic | 65.0% | |
GACCACCCTGCCCTTGGCAT+TGG | - | chr1_1:65709724-65709743 | Msa0036880:CDS | 65.0% | |
TGCGGAGGGCCTAGTTACCG+GGG | - | chr1_1:65712059-65712078 | Msa0036880:CDS | 65.0% | |
GTCGGTGACCACCCTGCCCT+TGG | - | chr1_1:65709718-65709737 | Msa0036880:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_1 | gene | 65708164 | 65713686 | 65708164 | ID=Msa0036880;Name=Msa0036880 |
chr1_1 | mRNA | 65708164 | 65713686 | 65708164 | ID=Msa0036880-mRNA-1;Parent=Msa0036880;Name=Msa0036880-mRNA-1;_AED=0.03;_eAED=0.03;_QI=635|0.8|0.66|1|0.8|0.83|6|198|1087 |
chr1_1 | exon | 65708164 | 65708572 | 65708164 | ID=Msa0036880-mRNA-1:exon:21188;Parent=Msa0036880-mRNA-1 |
chr1_1 | exon | 65709053 | 65709343 | 65709053 | ID=Msa0036880-mRNA-1:exon:21187;Parent=Msa0036880-mRNA-1 |
chr1_1 | exon | 65709495 | 65709751 | 65709495 | ID=Msa0036880-mRNA-1:exon:21186;Parent=Msa0036880-mRNA-1 |
chr1_1 | exon | 65709863 | 65710311 | 65709863 | ID=Msa0036880-mRNA-1:exon:21185;Parent=Msa0036880-mRNA-1 |
chr1_1 | exon | 65710425 | 65712491 | 65710425 | ID=Msa0036880-mRNA-1:exon:21184;Parent=Msa0036880-mRNA-1 |
chr1_1 | exon | 65713063 | 65713686 | 65713063 | ID=Msa0036880-mRNA-1:exon:21183;Parent=Msa0036880-mRNA-1 |
chr1_1 | five_prime_UTR | 65713063 | 65713686 | 65713063 | ID=Msa0036880-mRNA-1:five_prime_utr;Parent=Msa0036880-mRNA-1 |
chr1_1 | five_prime_UTR | 65712481 | 65712491 | 65712481 | ID=Msa0036880-mRNA-1:five_prime_utr;Parent=Msa0036880-mRNA-1 |
chr1_1 | CDS | 65710425 | 65712480 | 65710425 | ID=Msa0036880-mRNA-1:cds;Parent=Msa0036880-mRNA-1 |
chr1_1 | CDS | 65709863 | 65710311 | 65709863 | ID=Msa0036880-mRNA-1:cds;Parent=Msa0036880-mRNA-1 |
chr1_1 | CDS | 65709495 | 65709751 | 65709495 | ID=Msa0036880-mRNA-1:cds;Parent=Msa0036880-mRNA-1 |
chr1_1 | CDS | 65709053 | 65709343 | 65709053 | ID=Msa0036880-mRNA-1:cds;Parent=Msa0036880-mRNA-1 |
chr1_1 | CDS | 65708362 | 65708572 | 65708362 | ID=Msa0036880-mRNA-1:cds;Parent=Msa0036880-mRNA-1 |
chr1_1 | three_prime_UTR | 65708164 | 65708361 | 65708164 | ID=Msa0036880-mRNA-1:three_prime_utr;Parent=Msa0036880-mRNA-1 |
Gene Sequence |
Protein sequence |