AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0084530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0084530 MtrunA17_Chr1g0198921 96.246 1039 12 1 1 1012 1 1039 0.0 2056
Msa0084530 MtrunA17_Chr0c01g0489521 75.358 1116 165 10 1 1012 43 1152 0.0 1642
Msa0084530 MtrunA17_Chr8g0360571 43.851 618 271 6 455 1012 366 967 1.40e-163 506
Msa0084530 MtrunA17_Chr8g0360571 38.603 272 154 5 71 329 77 348 2.53e-48 186
Msa0084530 MtrunA17_Chr4g0041131 43.750 624 275 6 449 1012 359 966 1.64e-163 506
Msa0084530 MtrunA17_Chr4g0041131 38.869 283 157 6 71 337 77 359 1.26e-50 194
Msa0084530 MtrunA17_Chr2g0315891 43.548 620 270 7 455 1012 365 966 6.92e-160 496
Msa0084530 MtrunA17_Chr2g0315891 38.603 272 154 5 71 329 76 347 3.25e-48 186
Msa0084530 MtrunA17_Chr2g0325821 42.949 624 280 6 449 1012 359 966 8.37e-160 496
Msa0084530 MtrunA17_Chr2g0325821 39.576 283 155 6 71 337 77 359 2.30e-51 196
Msa0084530 MtrunA17_Chr1g0148101 33.957 374 163 11 551 922 1 292 1.14e-52 187
Msa0084530 MtrunA17_Chr7g0238121 64.486 107 16 2 189 280 1 100 2.75e-36 134
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0084530 AT1G68750.1 74.159 1041 231 5 1 1012 1 1032 0.0 1545
Msa0084530 AT2G42600.2 43.981 623 274 7 449 1012 357 963 2.46e-161 500
Msa0084530 AT2G42600.2 36.667 300 167 7 71 355 77 368 9.16e-48 185
Msa0084530 AT2G42600.1 43.981 623 274 7 449 1012 357 963 2.46e-161 500
Msa0084530 AT2G42600.1 36.667 300 167 7 71 355 77 368 9.16e-48 185
Msa0084530 AT2G42600.3 43.981 623 274 7 449 1012 357 963 2.46e-161 500
Msa0084530 AT2G42600.3 36.667 300 167 7 71 355 77 368 9.16e-48 185
Msa0084530 AT1G53310.2 43.689 618 272 6 455 1012 366 967 5.23e-161 499
Msa0084530 AT1G53310.2 38.079 302 163 7 71 355 77 371 3.04e-50 193
Msa0084530 AT1G53310.1 43.689 618 272 6 455 1012 366 967 5.23e-161 499
Msa0084530 AT1G53310.1 38.079 302 163 7 71 355 77 371 3.04e-50 193
Msa0084530 AT1G53310.3 43.689 618 272 6 455 1012 366 967 5.23e-161 499
Msa0084530 AT1G53310.3 38.079 302 163 7 71 355 77 371 3.04e-50 193
Msa0084530 AT3G14940.1 43.942 619 270 7 455 1012 366 968 1.46e-158 493
Msa0084530 AT3G14940.1 39.073 302 160 8 71 355 77 371 1.76e-51 197
Msa0084530 AT3G14940.2 43.942 619 270 7 455 1012 366 968 1.46e-158 493
Msa0084530 AT3G14940.2 39.073 302 160 8 71 355 77 371 1.76e-51 197

Find 277 sgRNAs with CRISPR-Local

Find 557 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAGCATCTCTGAGTTTA+AGG 0.106305 1_2:-64073588 None:intergenic
CATCCAAGTTCCAAACTTTA+TGG 0.132919 1_2:-64067438 None:intergenic
GCTTTGCTTATCACCGTAAA+TGG 0.145481 1_2:+64073604 Msa0084530:CDS
TGATGCAGTTACAACATATT+TGG 0.164824 1_2:+64070109 Msa0084530:CDS
CTTCAACATGTAGCATCTTT+TGG 0.216012 1_2:+64066836 Msa0084530:intron
AGTTACAACATATTTGGATA+TGG 0.231474 1_2:+64070115 Msa0084530:CDS
TTTGTGTTCTTCCTTCTTGC+AGG 0.245866 1_2:-64073018 None:intergenic
ATGGTTGGATATTCTGATTC+TGG 0.258407 1_2:+64071999 Msa0084530:CDS
ATTAGCATTTCTCGATCTTC+AGG 0.268596 1_2:-64066885 None:intergenic
CTCTAAAAGCTTCTGAAAAC+TGG 0.293404 1_2:-64069017 None:intergenic
TCCCACCCCGAGATGAAAAT+TGG 0.299079 1_2:+64072857 Msa0084530:CDS
GAAATGGTAGAGGCTAAGTT+TGG 0.300010 1_2:+64072760 Msa0084530:CDS
TGAAACAGCTGACCAGCTTT+TGG 0.305920 1_2:+64069782 Msa0084530:CDS
CCCAGCAGCAATCCCATTTA+CGG 0.307234 1_2:-64073617 None:intergenic
ATGGGATGAAGAAAAGAAAT+TGG 0.307389 1_2:+64070151 Msa0084530:CDS
GCTTGCTGCTATTGGAGAAT+TGG 0.313039 1_2:+64071332 Msa0084530:CDS
CTTCAGCAATCATGTGGGTC+TGG 0.317808 1_2:+64069905 Msa0084530:intron
AGAAACTTCAGCAGAATAAT+AGG 0.322124 1_2:+64073467 Msa0084530:CDS
CTCACCTTTGCGGTAACGTT+TGG 0.334654 1_2:-64067482 None:intergenic
CTATTCCCTGGGTATTTGCT+TGG 0.336715 1_2:+64073061 Msa0084530:CDS
GTAGCTGCTTGCAATGATTA+TGG 0.337387 1_2:+64072080 Msa0084530:CDS
ATTCGTAGAGTTGCAACCTT+TGG 0.349488 1_2:+64069959 Msa0084530:CDS
CCACAGCTCCCTCAACTTGC+TGG 0.351216 1_2:+64069040 Msa0084530:CDS
TGGCTATTGACCTCTATATT+CGG 0.351376 1_2:+64067802 Msa0084530:CDS
CTGTTTCACTTCTATCTAGA+TGG 0.356352 1_2:+64067778 Msa0084530:CDS
ACTTGCACTCCCATAAAGTT+TGG 0.358450 1_2:+64067428 Msa0084530:CDS
CAGTCATTATCTTACTATGA+TGG 0.363104 1_2:+64065885 Msa0084530:CDS
TCTCACAGGTTTGAATATAG+TGG 0.366572 1_2:+64067236 Msa0084530:intron
GGTTCGTAAAGGAGGGAATA+TGG 0.367321 1_2:+64066305 Msa0084530:CDS
CTAGCTGCATTACAGGAATC+TGG 0.367694 1_2:+64070068 Msa0084530:intron
GCCACTAGTACCTGTTAGTA+TGG 0.367990 1_2:+64070205 Msa0084530:CDS
TTCAGCAATCATGTGGGTCT+GGG 0.368013 1_2:+64069906 Msa0084530:intron
CAATCCCATGAACCTGTTGC+AGG 0.368697 1_2:+64073528 Msa0084530:CDS
AGGAAGAACACAAAGGGAAT+TGG 0.369646 1_2:+64073027 Msa0084530:CDS
TAACTGAACCAGCACCTCTT+AGG 0.373958 1_2:-64071817 None:intergenic
GATGCACGGCTTGCTGCTAT+TGG 0.377320 1_2:+64071324 Msa0084530:CDS
ATCCAAGTTCCAAACTTTAT+GGG 0.378571 1_2:-64067437 None:intergenic
CTGCTTCAGGCGTGGCTTCG+TGG 0.378796 1_2:-64072966 None:intergenic
TGGCCGCTTCACTGCTGCTT+GGG 0.379895 1_2:+64072031 Msa0084530:CDS
TATTTACCTATGGTGAGTTT+CGG 0.387771 1_2:-64065914 None:intergenic
TTTCCCAGGACAACTCTATA+AGG 0.392064 1_2:-64069070 None:intergenic
CTTCCAGCTTGGCTCGGAGT+TGG 0.392451 1_2:+64073102 Msa0084530:CDS
AGTCTATTGATAAAAGTTTC+CGG 0.395571 1_2:-64071841 None:intergenic
CTGGCCGCTTCACTGCTGCT+TGG 0.395587 1_2:+64072030 Msa0084530:CDS
CTAGCACATGAAATTCTAGA+AGG 0.398688 1_2:+64067885 Msa0084530:CDS
TAATAGGAGCTTGAGGAGGT+TGG 0.402520 1_2:+64073483 Msa0084530:CDS
TGCTCCTTATAGAGTTGTCC+TGG 0.405365 1_2:+64069066 Msa0084530:CDS
TCTATTGTACTTTGAAAGAA+AGG 0.405607 1_2:-64073192 None:intergenic
GCTCCTCTGTTATGAATCTC+TGG 0.406497 1_2:+64069812 Msa0084530:CDS
TTGAAAGGTGCTTGTGAGAA+AGG 0.408319 1_2:+64073132 Msa0084530:CDS
CTCCCATAAAGTTTGGAACT+TGG 0.409973 1_2:+64067435 Msa0084530:CDS
CTCCACCTGCAACAGGTTCA+TGG 0.410924 1_2:-64073533 None:intergenic
AGAGCTTCGATGATGATTGT+AGG 0.410996 1_2:+64065400 Msa0084530:CDS
ACATATTTACATTAGGTTGC+GGG 0.414213 1_2:+64071766 Msa0084530:intron
GCTATTCAGTCCCAACCACC+TGG 0.416046 1_2:+64072170 Msa0084530:CDS
AGGAGCCTATGTGATATCTA+TGG 0.416320 1_2:+64071156 Msa0084530:CDS
GAAACCTTCGTGCTATTCCC+TGG 0.416675 1_2:+64073049 Msa0084530:CDS
ACCGTAAATGGGATTGCTGC+TGG 0.417768 1_2:+64073616 Msa0084530:CDS
TGCTGATGTTAAAGAAGTCT+TGG 0.419254 1_2:+64071093 Msa0084530:CDS
AATGTTGACTGGTGTGTTAA+AGG 0.420623 1_2:-64065165 None:intergenic
TGTTACTGATACTTTAAGAC+TGG 0.424175 1_2:-64068885 None:intergenic
TGTCTCACCTCCATACTAAC+AGG 0.425394 1_2:-64070215 None:intergenic
GTTACAACATATTTGGATAT+GGG 0.425578 1_2:+64070116 Msa0084530:CDS
TCCTTCACGGTTTCAAATAG+AGG 0.428095 1_2:-64071794 None:intergenic
GAGGTGCTGGTTCAGTTATC+CGG 0.429326 1_2:+64071822 Msa0084530:CDS
GAAAACTGGACTTTCCTGTC+TGG 0.430217 1_2:-64069003 None:intergenic
TTGCCAGTTCTGAGTGTAGT+TGG 0.430252 1_2:-64068860 None:intergenic
CTTGCTGCTATTGGAGAATT+GGG 0.430420 1_2:+64071333 Msa0084530:CDS
GAGTTGTAAGAGGGAGAAGA+TGG 0.433748 1_2:-64068944 None:intergenic
TCAGAATCTCCACCTGCAAC+AGG 0.436922 1_2:-64073540 None:intergenic
AGGCGGTGGCCCTACATATC+TGG 0.437685 1_2:+64072148 Msa0084530:CDS
AGAAATGCTAATTGAGGATC+TGG 0.437949 1_2:+64066896 Msa0084530:CDS
TGCATGTGACTATGATCCTT+TGG 0.439479 1_2:+64069752 Msa0084530:CDS
AACACTTCGGTCTACCGAGC+AGG 0.441668 1_2:+64072735 Msa0084530:CDS
GGCTATTGACCTCTATATTC+GGG 0.443763 1_2:+64067803 Msa0084530:CDS
GTGCTTGTGAGAAAGGTCAT+AGG 0.444464 1_2:+64073139 Msa0084530:CDS
TGAGAGAGATAACTTCAATA+TGG 0.445525 1_2:+64067046 Msa0084530:CDS
CCAGATTTGTTCTTCCAGCT+TGG 0.448126 1_2:+64073091 Msa0084530:CDS
CCAAGCTGGAAGAACAAATC+TGG 0.448959 1_2:-64073091 None:intergenic
ATGTTGACTGGTGTGTTAAA+GGG 0.449222 1_2:-64065164 None:intergenic
GGCAGTATTGGTCGAGGCGG+TGG 0.449566 1_2:+64072134 Msa0084530:CDS
TGTTAAGAAGCAGTGTTAAC+CGG 0.450188 1_2:-64073650 None:intergenic
CCAGCTCTAGCTTCATCAAC+TGG 0.450656 1_2:-64067102 None:intergenic
GTCTACCGAGCAGGGAGAAA+TGG 0.450962 1_2:+64072744 Msa0084530:CDS
CATAAAGTTTGGAACTTGGA+TGG 0.451055 1_2:+64067439 Msa0084530:CDS
TTCCGAATCGCTGCTGAACT+AGG 0.451804 1_2:+64071121 Msa0084530:CDS
ACTGTGTTGTAAAGATCATC+CGG 0.454214 1_2:-64066387 None:intergenic
GGTGTGTTAAAGGGGAAGTT+TGG 0.455140 1_2:-64065155 None:intergenic
AGGAAGCCGAGCTCTGCTTC+AGG 0.462959 1_2:-64072979 None:intergenic
CATCACAGACCCAGGTGGTT+GGG 0.463137 1_2:-64072180 None:intergenic
CTTTGCTTATCACCGTAAAT+GGG 0.463812 1_2:+64073605 Msa0084530:CDS
ATATGGGTACTTATAGTGAA+TGG 0.464922 1_2:+64070132 Msa0084530:CDS
TACAATCATCATCGAAGCTC+TGG 0.466446 1_2:-64065398 None:intergenic
CCTGGGAAATGTAAAGGATA+AGG 0.469149 1_2:+64069084 Msa0084530:CDS
GGCAGAGTGCATGTAATATG+AGG 0.469229 1_2:+64065761 Msa0084530:intron
CACTGCAATACAAACACATT+CGG 0.470757 1_2:+64066710 Msa0084530:CDS
AGTCATTATCTTACTATGAT+GGG 0.472061 1_2:+64065886 Msa0084530:CDS
GGAGCAGAGGTTCCAAAAGC+TGG 0.475317 1_2:-64069794 None:intergenic
TGAAAATTGGCGTAGTCTCA+TGG 0.476454 1_2:+64072870 Msa0084530:CDS
TTGTGTTCTTCCTTCTTGCA+GGG 0.476962 1_2:-64073017 None:intergenic
TCCCTAGTTCAGCAGCGATT+CGG 0.477789 1_2:-64071123 None:intergenic
TAAAAGCAATGTACAAAGAA+TGG 0.478411 1_2:+64073169 Msa0084530:CDS
TGTGCAGGGTGGAGTTTCCC+CGG 0.478623 1_2:+64066368 Msa0084530:CDS
GCTTGGCTCGGAGTTGGAGC+AGG 0.478720 1_2:+64073108 Msa0084530:CDS
CATGGCCGTGGAGGCAGTAT+TGG 0.479015 1_2:+64072122 Msa0084530:CDS
GAGCAATTCCAGCAAGTTGA+GGG 0.480050 1_2:-64069048 None:intergenic
TTTGTTCTTCCAGCTTGGCT+CGG 0.482407 1_2:+64073096 Msa0084530:CDS
AAGACTTCTTTAACATCAGC+AGG 0.482543 1_2:-64071091 None:intergenic
AAAACTGGACTTTCCTGTCT+GGG 0.483522 1_2:-64069002 None:intergenic
AGGTTCATGGGATTGAGAAA+TGG 0.484409 1_2:-64073520 None:intergenic
CGGTTGACTAGAGTTGTAAG+AGG 0.484510 1_2:-64068954 None:intergenic
GAGGGTAAATGAGCTCTAGC+TGG 0.485019 1_2:-64068408 None:intergenic
TTAGCATTTCTCGATCTTCA+GGG 0.485732 1_2:-64066884 None:intergenic
GTTCTGAGTGTAGTTGGACT+TGG 0.489764 1_2:-64068854 None:intergenic
AATTGATCTACCTTGTGATC+AGG 0.496505 1_2:-64068751 None:intergenic
TTGGGAACTTTACAAAGCTC+AGG 0.497178 1_2:+64072049 Msa0084530:CDS
CAGGGCGACTACCTATGTTC+AGG 0.498058 1_2:-64072999 None:intergenic
GGAGTGCAAGTCAGTGGAAG+TGG 0.498492 1_2:-64067416 None:intergenic
TGTGTTTAACCAGCTTGTGC+AGG 0.501342 1_2:+64066353 Msa0084530:CDS
CTCTACCATTTCTCCCTGCT+CGG 0.502297 1_2:-64072749 None:intergenic
CTGTATATGCAGGTTATGGT+TGG 0.505392 1_2:+64071984 Msa0084530:intron
GCTCCAACTCCGAGCCAAGC+TGG 0.505446 1_2:-64073105 None:intergenic
ACGAGAATCGCCATGAGAGT+TGG 0.506900 1_2:+64068343 Msa0084530:CDS
TGACCTCTATATTCGGGAAG+TGG 0.507739 1_2:+64067809 Msa0084530:CDS
GACATTCTTCACCGTGAAGT+TGG 0.507840 1_2:+64065444 Msa0084530:CDS
CCATGTCTTCAGCAATCATG+TGG 0.508496 1_2:+64069899 Msa0084530:intron
CTACCTTGTGATCAGGTCCC+GGG 0.508617 1_2:-64068744 None:intergenic
AGCACCTCTTAGGTCCTTCA+CGG 0.509480 1_2:-64071807 None:intergenic
CAATACTGCCTCCACGGCCA+TGG 0.510703 1_2:-64072121 None:intergenic
GCTCTAGCTGGAAGCTGTGT+TGG 0.512706 1_2:-64068396 None:intergenic
AAATGGTAGAGGCTAAGTTT+GGG 0.514174 1_2:+64072761 Msa0084530:CDS
GAAGAAGTTCTAACCGTCTA+CGG 0.515159 1_2:-64069719 None:intergenic
GATGATGATTGTAGGTTGCT+TGG 0.516176 1_2:+64065408 Msa0084530:CDS
AATTGAAGATGAAGAACCAT+TGG 0.516879 1_2:-64068921 None:intergenic
CGATCTTCAGGGCTAAGATC+AGG 0.517591 1_2:-64066873 None:intergenic
TCATCTCGGGGTGGGAGAGG+TGG 0.518044 1_2:-64072850 None:intergenic
TATCCACTTCCCGAATATAG+AGG 0.519946 1_2:-64067812 None:intergenic
TCCACCTGCAACAGGTTCAT+GGG 0.520556 1_2:-64073532 None:intergenic
GCCGAGCTCTGCTTCAGGCG+TGG 0.520653 1_2:-64072974 None:intergenic
CCTTATCCTTTACATTTCCC+AGG 0.522515 1_2:-64069084 None:intergenic
TCTACCTTGTGATCAGGTCC+CGG 0.526127 1_2:-64068745 None:intergenic
ATTATGTGTACCAGCAAAAG+AGG 0.526645 1_2:-64068427 None:intergenic
AGTTGTCCTGGGAAATGTAA+AGG 0.527528 1_2:+64069078 Msa0084530:CDS
TCTGATTCTGGTAAAGATGC+TGG 0.527744 1_2:+64072011 Msa0084530:CDS
AGTCCAACTACACTCAGAAC+TGG 0.528241 1_2:+64068857 Msa0084530:CDS
TTACAACACAGTCTGCAAAC+AGG 0.529417 1_2:+64066398 Msa0084530:CDS
TCCGAATCGCTGCTGAACTA+GGG 0.530013 1_2:+64071122 Msa0084530:CDS
AAACCTTCGTGCTATTCCCT+GGG 0.530352 1_2:+64073050 Msa0084530:CDS
GATTTGAGCTATCTATGAAT+CGG 0.532118 1_2:+64067841 Msa0084530:CDS
TGGAAGTAAGAAAGGAACTC+TGG 0.534013 1_2:-64072946 None:intergenic
ATAAAGTTTGGAACTTGGAT+GGG 0.536672 1_2:+64067440 Msa0084530:CDS
TATGGCAGACAGATGAGCTT+AGG 0.537663 1_2:+64067064 Msa0084530:CDS
GACTGAATAGCCAGATATGT+AGG 0.537677 1_2:-64072158 None:intergenic
CTAGCTTCATCAACTGGAGT+GGG 0.537880 1_2:-64067096 None:intergenic
TAGAGTTGCAACCTTTGGAA+TGG 0.539927 1_2:+64069964 Msa0084530:CDS
TAGCTGCATTACAGGAATCT+GGG 0.541027 1_2:+64070069 Msa0084530:intron
GTAAATTTCCTCTGAGAAAG+CGG 0.541472 1_2:-64068974 None:intergenic
CAAAGGTGGTACCAACTTCA+CGG 0.542181 1_2:-64065455 None:intergenic
TGTTCGTCGATTAATTTGTG+TGG 0.545050 1_2:-64066689 None:intergenic
GCAAGAAGGAAGAACACAAA+GGG 0.545085 1_2:+64073021 Msa0084530:CDS
CGTGTTCACAGGGTTCGTAA+AGG 0.546242 1_2:+64066294 Msa0084530:intron
GGGTGGGAGAGGTGGACGAA+GGG 0.547195 1_2:-64072842 None:intergenic
CTTCATTAAAACCATTCCAA+AGG 0.547879 1_2:-64069975 None:intergenic
AAGTTTGTGCTCGTGATTAG+TGG 0.548271 1_2:+64073439 Msa0084530:CDS
TTTCTTAATTAATAGGATGG+TGG 0.548975 1_2:+64068824 Msa0084530:intron
AAAAGTTAGTTACTTGAGCA+AGG 0.549708 1_2:-64065503 None:intergenic
CCATCACAGACCCAGGTGGT+TGG 0.550298 1_2:-64072181 None:intergenic
TATGGGTACTTATAGTGAAT+GGG 0.550472 1_2:+64070133 Msa0084530:CDS
GGAGTTGGAGCAGGTTTGAA+AGG 0.551309 1_2:+64073117 Msa0084530:CDS
GTGAAGGACCTAAGAGGTGC+TGG 0.552645 1_2:+64071809 Msa0084530:CDS
TGGAGATTCTGAAGAGGTTG+AGG 0.553888 1_2:+64073551 Msa0084530:CDS
GCATGTAATATGAGGCAAGC+AGG 0.554017 1_2:+64065769 Msa0084530:CDS
AGATCGAGAAATGCTAATTG+AGG 0.554326 1_2:+64066890 Msa0084530:CDS
GTTCACAGGGTTCGTAAAGG+AGG 0.555920 1_2:+64066297 Msa0084530:intron
TGGCTTCGTGGAAGTAAGAA+AGG 0.556061 1_2:-64072954 None:intergenic
ATGGGATTGCTGCTGGGATG+AGG 0.557054 1_2:+64073623 Msa0084530:CDS
GGAGCAATTCCAGCAAGTTG+AGG 0.557720 1_2:-64069049 None:intergenic
TCAGCAATCATGTGGGTCTG+GGG 0.558099 1_2:+64069907 Msa0084530:intron
GGGGTGGGAGAGGTGGACGA+AGG 0.558545 1_2:-64072843 None:intergenic
ATTAAAGTTACACTATTCCA+TGG 0.558555 1_2:+64072104 Msa0084530:CDS
CCAGTTGATGAAGCTAGAGC+TGG 0.561704 1_2:+64067102 Msa0084530:CDS
TGCTTGTGAGAAAGGTCATA+GGG 0.562712 1_2:+64073140 Msa0084530:CDS
AGTTTGTGCTCGTGATTAGT+GGG 0.563717 1_2:+64073440 Msa0084530:CDS
GCTCCTTATAGAGTTGTCCT+GGG 0.565302 1_2:+64069067 Msa0084530:CDS
GCCACGCCTGAAGCAGAGCT+CGG 0.565662 1_2:+64072973 Msa0084530:CDS
AATGAAGCTTGATTTACGCC+AGG 0.565768 1_2:+64069991 Msa0084530:CDS
TGGACTGATTCCAACTCTCA+TGG 0.566823 1_2:-64068353 None:intergenic
GTGTTTAACCAGCTTGTGCA+GGG 0.568664 1_2:+64066354 Msa0084530:CDS
TTCACTTCTATCTAGATGGA+TGG 0.571403 1_2:+64067782 Msa0084530:CDS
GTTACACTATTCCATGGCCG+TGG 0.572502 1_2:+64072110 Msa0084530:CDS
CTTAGTGTAGCAATGTTGAC+TGG 0.573176 1_2:-64065176 None:intergenic
CTGACACGTCGTAAATAATG+AGG 0.573177 1_2:-64067282 None:intergenic
GATTCATAACAGAGGAGCAG+AGG 0.575099 1_2:-64069807 None:intergenic
GCTGCTGGGATGAGGAATAC+CGG 0.577928 1_2:+64073631 Msa0084530:CDS
TAGGTAGTCGCCCTGCAAGA+AGG 0.578256 1_2:+64073007 Msa0084530:CDS
GTTCGTCGATTAATTTGTGT+GGG 0.578693 1_2:-64066688 None:intergenic
GGGTCTGGGGTGCTAGCTGA+TGG 0.578897 1_2:+64069920 Msa0084530:CDS
CAAGAGAGCTGAAAGGAAAG+AGG 0.580073 1_2:+64070183 Msa0084530:CDS
CCCTCTATTTGAAACCGTGA+AGG 0.582239 1_2:+64071793 Msa0084530:CDS
AAACTCCACCCTGCACAAGC+TGG 0.582588 1_2:-64066362 None:intergenic
CCGTAAATGGGATTGCTGCT+GGG 0.582637 1_2:+64073617 Msa0084530:CDS
AAGTGACTGACTTCTATTCG+TGG 0.582977 1_2:-64068373 None:intergenic
TTCGAGTTTGTCAACAAAGG+TGG 0.583706 1_2:-64065469 None:intergenic
TGTCAGCAATGCTTTAAAGA+AGG 0.584116 1_2:+64067299 Msa0084530:CDS
ATATAGTGGAGCAGTCACTC+TGG 0.585383 1_2:+64067250 Msa0084530:CDS
GTTCCCAAGCAGCAGTGAAG+CGG 0.586086 1_2:-64072034 None:intergenic
TCCCATGAACCTGTTGCAGG+TGG 0.586186 1_2:+64073531 Msa0084530:CDS
CCTTCACGGTTTCAAATAGA+GGG 0.586828 1_2:-64071793 None:intergenic
AGCAGAATAATAGGAGCTTG+AGG 0.589386 1_2:+64073476 Msa0084530:CDS
GTTACTGATACTTTAAGACT+GGG 0.590423 1_2:-64068884 None:intergenic
ACAAGTTCAGAAAATTCCAA+TGG 0.590563 1_2:+64068905 Msa0084530:CDS
GCATCCTAGACTAGACATCC+CGG 0.591241 1_2:+64068726 Msa0084530:CDS
AAATCCAAACGTTACCGCAA+AGG 0.593471 1_2:+64067478 Msa0084530:CDS
CTATTCAGTCCCAACCACCT+GGG 0.594998 1_2:+64072171 Msa0084530:CDS
TTCACAGGGTTCGTAAAGGA+GGG 0.596243 1_2:+64066298 Msa0084530:intron
GCAAGCAGGTATAGTGAACA+TGG 0.596263 1_2:+64065783 Msa0084530:CDS
AGCTTGAGAGAAGCCGTAGA+CGG 0.598721 1_2:+64069706 Msa0084530:intron
ACTGAATAGCCAGATATGTA+GGG 0.599957 1_2:-64072157 None:intergenic
CCAACCACCTGGGTCTGTGA+TGG 0.600411 1_2:+64072181 Msa0084530:CDS
GGTTCTTAATGACGTGCTCG+CGG 0.600425 1_2:-64071868 None:intergenic
CGTGGAGGCAGTATTGGTCG+AGG 0.601373 1_2:+64072128 Msa0084530:CDS
CTGTGTTGTAAAGATCATCC+GGG 0.602908 1_2:-64066386 None:intergenic
GAAACCGTGAAGGACCTAAG+AGG 0.603322 1_2:+64071803 Msa0084530:CDS
GGTCCCGGGATGTCTAGTCT+AGG 0.603572 1_2:-64068730 None:intergenic
TCTAGCTTCATCAACTGGAG+TGG 0.604729 1_2:-64067097 None:intergenic
AAATTTACAGAATCCCAGAC+AGG 0.606640 1_2:+64068989 Msa0084530:CDS
AAGTTTGGAACTTGGATGGG+AGG 0.608594 1_2:+64067443 Msa0084530:CDS
TCTTTCGAGTTTGTCAACAA+AGG 0.610094 1_2:-64065472 None:intergenic
TGGATGGGAGGTGATAGAGA+TGG 0.610576 1_2:+64067455 Msa0084530:CDS
GAACCACAATGGACATCAAG+AGG 0.612446 1_2:+64071886 Msa0084530:CDS
CATGTCTTCAGCAATCATGT+GGG 0.620570 1_2:+64069900 Msa0084530:intron
GTTCCTACTTACGTTCCACC+AGG 0.621553 1_2:-64071366 None:intergenic
GCTGTTTCATAATAATCCAA+AGG 0.621583 1_2:-64069768 None:intergenic
GCACCTCTTGATGTCCATTG+TGG 0.622223 1_2:-64071889 None:intergenic
TCAGAGGAGAGGCAAGAACT+CGG 0.623021 1_2:+64073382 Msa0084530:intron
TCCATACTAACAGGTACTAG+TGG 0.624015 1_2:-64070206 None:intergenic
CCAGCAAGTTGAGGGAGCTG+TGG 0.625144 1_2:-64069040 None:intergenic
CTCGACCAATACTGCCTCCA+CGG 0.625263 1_2:-64072127 None:intergenic
GGAACTTTACAAAGCTCAGG+AGG 0.626662 1_2:+64072052 Msa0084530:CDS
TTTATGGGAGTGCAAGTCAG+TGG 0.628326 1_2:-64067422 None:intergenic
TGTTGACTGGTGTGTTAAAG+GGG 0.628844 1_2:-64065163 None:intergenic
CGAGCAGGGAGAAATGGTAG+AGG 0.629375 1_2:+64072750 Msa0084530:CDS
ACACTTCGGTCTACCGAGCA+GGG 0.629832 1_2:+64072736 Msa0084530:CDS
TTGAGTCCAAGCAAATACCC+AGG 0.630631 1_2:-64073067 None:intergenic
AAGCCCTTGTGTCAGAGGAG+AGG 0.630970 1_2:+64073371 Msa0084530:intron
GGCAATTATTCATACACTCG+AGG 0.633269 1_2:-64071179 None:intergenic
CATCCCGGGACCTGATCACA+AGG 0.634971 1_2:+64068741 Msa0084530:CDS
GTGTATTGCAGGGAACACTT+CGG 0.637688 1_2:+64072722 Msa0084530:intron
CTAGTCAACCGCTTTCTCAG+AGG 0.639378 1_2:+64068966 Msa0084530:CDS
ACACTATTCCATGGCCGTGG+AGG 0.640049 1_2:+64072113 Msa0084530:CDS
TTCTTAACAAGAGAGCTGAA+AGG 0.641838 1_2:+64070176 Msa0084530:CDS
TTGGGAAGAGCATGTCCTGG+TGG 0.644240 1_2:+64071351 Msa0084530:CDS
CATCCTAGACTAGACATCCC+GGG 0.646195 1_2:+64068727 Msa0084530:CDS
ACGGTTAGAACTTCTTCTTG+AGG 0.647683 1_2:+64069725 Msa0084530:CDS
TCATAGATAGCTCAAATCTG+AGG 0.648141 1_2:-64067836 None:intergenic
CGAGGCCATAGATATCACAT+AGG 0.648602 1_2:-64071161 None:intergenic
TAACCTACCATCACAGACCC+AGG 0.649354 1_2:-64072188 None:intergenic
TTATGTGTACCAGCAAAAGA+GGG 0.650285 1_2:-64068426 None:intergenic
GGTTGACTAGAGTTGTAAGA+GGG 0.652302 1_2:-64068953 None:intergenic
TCTGTAAAAGCTCTACTGCA+AGG 0.652755 1_2:-64071299 None:intergenic
GAATTGGGAAGAGCATGTCC+TGG 0.653296 1_2:+64071348 Msa0084530:CDS
TGCAAGAAGGAAGAACACAA+AGG 0.657542 1_2:+64073020 Msa0084530:CDS
TTTAACCAGCTTGTGCAGGG+TGG 0.657609 1_2:+64066357 Msa0084530:CDS
ACTAGTACCTGTTAGTATGG+AGG 0.666381 1_2:+64070208 Msa0084530:CDS
CACGTCATTAAGAACCACAA+TGG 0.667175 1_2:+64071875 Msa0084530:CDS
GTATAGCCGAAACTCACCAT+AGG 0.670381 1_2:+64065908 Msa0084530:CDS
TGAGTCCAAGCAAATACCCA+GGG 0.675293 1_2:-64073066 None:intergenic
AGAATAATAGGAGCTTGAGG+AGG 0.677598 1_2:+64073479 Msa0084530:CDS
GAGCTCGGCTTCCTGAACAT+AGG 0.682691 1_2:+64072988 Msa0084530:CDS
AGTTGTCTAACAGCTATCTG+TGG 0.683037 1_2:-64072787 None:intergenic
TGCAGGTGGAGATTCTGAAG+AGG 0.686065 1_2:+64073545 Msa0084530:CDS
GTACCAGAGATTCATAACAG+AGG 0.693986 1_2:-64069815 None:intergenic
GGAGGCAGTATTGGTCGAGG+CGG 0.705601 1_2:+64072131 Msa0084530:CDS
TCAAACAAAGAAGCGACACG+TGG 0.707386 1_2:-64065229 None:intergenic
TGTGTTGTAAAGATCATCCG+GGG 0.722012 1_2:-64066385 None:intergenic
CCTACCATCACAGACCCAGG+TGG 0.773370 1_2:-64072185 None:intergenic
ATACCCAGGGAATAGCACGA+AGG 0.786673 1_2:-64073053 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATCTTTTTTTTTTTTTTT+TGG + chr1_2:64065252-64065271 Msa0084530:five_prime_UTR 10.0%
!! AAAAGAAAGTAATAATAATT+TGG + chr1_2:64067177-64067196 Msa0084530:intron 10.0%
!! ACAAAATAGAATTTATATTA+AGG - chr1_2:64068638-64068657 None:intergenic 10.0%
!!! TGTATATTTTCTTAATTAAT+AGG + chr1_2:64068817-64068836 Msa0084530:intron 10.0%
!!! ATTCATTTAATTTTATGTTA+TGG + chr1_2:64071926-64071945 Msa0084530:intron 10.0%
!! AATAAACAAGAAAAACATTA+AGG - chr1_2:64066557-64066576 None:intergenic 15.0%
!!! TAATGTTTTTCTTGTTTATT+TGG + chr1_2:64066557-64066576 Msa0084530:intron 15.0%
!! TAAAAAAATGTAAAACAAAC+TGG - chr1_2:64066626-64066645 None:intergenic 15.0%
!!! TATTTTCTTAATTAATAGGA+TGG + chr1_2:64068821-64068840 Msa0084530:intron 15.0%
!! TCATATTTATCATTAAAAGA+TGG - chr1_2:64070352-64070371 None:intergenic 15.0%
!! TTCTAAGCAAAAATATAAAA+AGG - chr1_2:64070586-64070605 None:intergenic 15.0%
!! TTTATATCAACTTCTAATTA+TGG + chr1_2:64070616-64070635 Msa0084530:intron 15.0%
!!! TTTTAGCTTTTCAATATAAT+TGG - chr1_2:64070664-64070683 None:intergenic 15.0%
!!! AAGTTGTTTTATAAGTATAT+TGG + chr1_2:64071603-64071622 Msa0084530:intron 15.0%
!! TAATAGTACTTTCCAAATTT+CGG + chr1_2:64065975-64065994 Msa0084530:intron 20.0%
!! TACATGAAAAGAACAAAAAA+TGG - chr1_2:64066425-64066444 None:intergenic 20.0%
!!! TTTTTCTTGTTTATTTGGAA+TGG + chr1_2:64066562-64066581 Msa0084530:intron 20.0%
!!! TTTTTTATTTTTGTTGCTTC+AGG + chr1_2:64066639-64066658 Msa0084530:intron 20.0%
!! TTATCTGTTTAACTATTAAG+TGG + chr1_2:64066979-64066998 Msa0084530:intron 20.0%
!!! GTTTTATTTTTATTTCTCAC+AGG + chr1_2:64067222-64067241 Msa0084530:intron 20.0%
!!! CAAATATTTTGTTCAACTTT+GGG + chr1_2:64067714-64067733 Msa0084530:intron 20.0%
!!! AAAGTATTAGCACAAAAAAT+TGG + chr1_2:64068134-64068153 Msa0084530:intron 20.0%
!! CAAAAAATTGGAATTAAGAA+TGG + chr1_2:64068146-64068165 Msa0084530:intron 20.0%
!!! TATCTTTTTCATGTAGAAAA+TGG + chr1_2:64068694-64068713 Msa0084530:intron 20.0%
!! AAATTATACTTGCATGTTAT+TGG + chr1_2:64069198-64069217 Msa0084530:intron 20.0%
!! TTCAACTTAGCTATAAAAAA+AGG + chr1_2:64069418-64069437 Msa0084530:intron 20.0%
!! TCAACTTAGCTATAAAAAAA+GGG + chr1_2:64069419-64069438 Msa0084530:intron 20.0%
!! AATGCATGCATTTATTATAA+TGG - chr1_2:64069677-64069696 None:intergenic 20.0%
!! TGATAATAAATACACCAAAA+TGG - chr1_2:64070468-64070487 None:intergenic 20.0%
!! AAAAGAAAGTCTCATTAATT+TGG - chr1_2:64070496-64070515 None:intergenic 20.0%
!!! AATTAATGAGACTTTCTTTT+TGG + chr1_2:64070496-64070515 Msa0084530:intron 20.0%
!!! TAAACAATAAACATCCATTT+TGG - chr1_2:64070532-64070551 None:intergenic 20.0%
!! AGCAAAAATATAAAAAGGAT+TGG - chr1_2:64070581-64070600 None:intergenic 20.0%
!!! ATTGGTATCTTGATTTTATT+AGG + chr1_2:64071066-64071085 Msa0084530:intron 20.0%
!! AAATTGTAGTCATAATTTCA+AGG - chr1_2:64071206-64071225 None:intergenic 20.0%
!!! ATTTTCACAATACAGATATA+GGG - chr1_2:64071734-64071753 None:intergenic 20.0%
!!! AATTTTCACAATACAGATAT+AGG - chr1_2:64071735-64071754 None:intergenic 20.0%
!! TCTTATGACATATTTACATT+AGG + chr1_2:64071759-64071778 Msa0084530:intron 20.0%
!! TATTATAAATCTGTATATGC+AGG + chr1_2:64071974-64071993 Msa0084530:intron 20.0%
!!! TAATTTTTTTGGTACATCAA+TGG + chr1_2:64072296-64072315 Msa0084530:intron 20.0%
!!! CAATAATCTTAAGAACTTTT+AGG + chr1_2:64072515-64072534 Msa0084530:intron 20.0%
!! TAAAATCAAATTCATAGTTG+AGG - chr1_2:64072599-64072618 None:intergenic 20.0%
! CATGAAAAGTAAAAAAAGTG+GGG - chr1_2:64065564-64065583 None:intergenic 25.0%
! CCATGAAAAGTAAAAAAAGT+GGG - chr1_2:64065565-64065584 None:intergenic 25.0%
!!! CCACTTTTTTTACTTTTCAT+GGG + chr1_2:64065563-64065582 Msa0084530:intron 25.0%
!!! CACTTTTTTTACTTTTCATG+GGG + chr1_2:64065564-64065583 Msa0084530:intron 25.0%
!!! GATGTTCCTATTTTTGTTTT+TGG + chr1_2:64065740-64065759 Msa0084530:intron 25.0%
! AGTCATTATCTTACTATGAT+GGG + chr1_2:64065886-64065905 Msa0084530:CDS 25.0%
! AATTAACTGCTTATAGCATA+AGG - chr1_2:64066217-64066236 None:intergenic 25.0%
! CATGTATATCTACATATGTA+TGG + chr1_2:64066439-64066458 Msa0084530:intron 25.0%
! ACAATTTCCAAAAAAATGCA+AGG - chr1_2:64066506-64066525 None:intergenic 25.0%
!! TGTGAGTATTTTACTTTGTT+TGG + chr1_2:64066738-64066757 Msa0084530:intron 25.0%
!! CATTCCATTGAATTTTTGAA+TGG - chr1_2:64066764-64066783 None:intergenic 25.0%
! CATGATGACAAATGAAAATA+CGG - chr1_2:64067016-64067035 None:intergenic 25.0%
! TTTCATTTGTCATCATGATT+TGG + chr1_2:64067019-64067038 Msa0084530:intron 25.0%
!! TATCAAGTATTGTATATGTC+AGG + chr1_2:64067138-64067157 Msa0084530:intron 25.0%
! TTTATGAATACTAGTAACTG+AGG + chr1_2:64067550-64067569 Msa0084530:intron 25.0%
! TTATGAATACTAGTAACTGA+GGG + chr1_2:64067551-64067570 Msa0084530:intron 25.0%
! TTAAACATTGACATAACAGT+AGG - chr1_2:64067588-64067607 None:intergenic 25.0%
!!! TTTCTTTCGTAGTTTTGTTA+TGG + chr1_2:64067616-64067635 Msa0084530:intron 25.0%
!!! TTCTTTCGTAGTTTTGTTAT+GGG + chr1_2:64067617-64067636 Msa0084530:intron 25.0%
! TGATGATATTATTCAAGTAC+AGG - chr1_2:64067687-64067706 None:intergenic 25.0%
! CCAAAGTTGAACAAAATATT+TGG - chr1_2:64067716-64067735 None:intergenic 25.0%
!! CCAAATATTTTGTTCAACTT+TGG + chr1_2:64067713-64067732 Msa0084530:intron 25.0%
!! TGTCTGTTGAATTTTACTTT+TGG + chr1_2:64067910-64067929 Msa0084530:intron 25.0%
! CATAATTAGAAAATACTCTG+AGG - chr1_2:64068259-64068278 None:intergenic 25.0%
! ACATTGAAATCAAAGAGATA+TGG - chr1_2:64068494-64068513 None:intergenic 25.0%
! TTGCACGAGAAATAATTATT+AGG + chr1_2:64068600-64068619 Msa0084530:intron 25.0%
! TATACATTATATAGCATGCT+AGG - chr1_2:64068803-64068822 None:intergenic 25.0%
! TTTCTTAATTAATAGGATGG+TGG + chr1_2:64068824-64068843 Msa0084530:intron 25.0%
!!! ACTTTTTAAGTACTAATCAC+CGG - chr1_2:64069128-64069147 None:intergenic 25.0%
!! CAAATCATTTGAAGCATTTA+CGG - chr1_2:64069280-64069299 None:intergenic 25.0%
!! TTATAGCTAAGTTGAAAAGA+TGG - chr1_2:64069414-64069433 None:intergenic 25.0%
! TATGAAATATAAATCGTACC+TGG - chr1_2:64070012-64070031 None:intergenic 25.0%
! AGTTACAACATATTTGGATA+TGG + chr1_2:64070115-64070134 Msa0084530:CDS 25.0%
! GTTACAACATATTTGGATAT+GGG + chr1_2:64070116-64070135 Msa0084530:CDS 25.0%
!! TTGGAATTAGTTTACCAAAA+TGG + chr1_2:64070515-64070534 Msa0084530:intron 25.0%
! CCATATTATTAGTGTGATTA+TGG - chr1_2:64071249-64071268 None:intergenic 25.0%
! CCATAATCACACTAATAATA+TGG + chr1_2:64071246-64071265 Msa0084530:intron 25.0%
! ATCAGACTAATTGAAAGAAA+GGG - chr1_2:64071391-64071410 None:intergenic 25.0%
!! TTCAATTAGTCTGATCAAAA+TGG + chr1_2:64071396-64071415 Msa0084530:intron 25.0%
! AATAAGCTGTTTATCAAAAC+AGG - chr1_2:64071472-64071491 None:intergenic 25.0%
! ACCAACACTTATTATGATAA+GGG + chr1_2:64071505-64071524 Msa0084530:intron 25.0%
! AGTCTATTGATAAAAGTTTC+CGG - chr1_2:64071844-64071863 None:intergenic 25.0%
! ATTAAAGTTACACTATTCCA+TGG + chr1_2:64072104-64072123 Msa0084530:CDS 25.0%
! GTAAATAAGTGACAAACATT+TGG + chr1_2:64072397-64072416 Msa0084530:intron 25.0%
!!! AAACTGTTTTGGTTGAATTT+TGG + chr1_2:64072484-64072503 Msa0084530:intron 25.0%
!!! GAGGATTTAATTTGATTATC+AGG - chr1_2:64072580-64072599 None:intergenic 25.0%
! TAAAAGCAATGTACAAAGAA+TGG + chr1_2:64073169-64073188 Msa0084530:CDS 25.0%
!! TCTATTGTACTTTGAAAGAA+AGG - chr1_2:64073195-64073214 None:intergenic 25.0%
AAAAGTTAGTTACTTGAGCA+AGG - chr1_2:64065506-64065525 None:intergenic 30.0%
!!! CCCACTTTTTTTACTTTTCA+TGG + chr1_2:64065562-64065581 Msa0084530:intron 30.0%
CCCATGAAAAGTAAAAAAAG+TGG - chr1_2:64065566-64065585 None:intergenic 30.0%
! TTTTGCTCTGTTTCCTTTTA+TGG + chr1_2:64065623-64065642 Msa0084530:intron 30.0%
! TTTGCTCTGTTTCCTTTTAT+GGG + chr1_2:64065624-64065643 Msa0084530:intron 30.0%
AAAAAGCAAAACCCCATAAA+AGG - chr1_2:64065639-64065658 None:intergenic 30.0%
! TAGATTTTCACATTCAGCAA+GGG - chr1_2:64065663-64065682 None:intergenic 30.0%
! ATAGATTTTCACATTCAGCA+AGG - chr1_2:64065664-64065683 None:intergenic 30.0%
TATTACTCACTTCTGATCAA+AGG - chr1_2:64065714-64065733 None:intergenic 30.0%
ACTCTGCCAAAAACAAAAAT+AGG - chr1_2:64065749-64065768 None:intergenic 30.0%
CAGTCATTATCTTACTATGA+TGG + chr1_2:64065885-64065904 Msa0084530:CDS 30.0%
TATTTACCTATGGTGAGTTT+CGG - chr1_2:64065917-64065936 None:intergenic 30.0%
CACCATAGGTAAATAATCTA+CGG + chr1_2:64065922-64065941 Msa0084530:intron 30.0%
CACTAACTCTGATTATTTGT+TGG + chr1_2:64065948-64065967 Msa0084530:intron 30.0%
! TACTTTCCAAATTTCGGTTT+TGG + chr1_2:64065981-64066000 Msa0084530:intron 30.0%
CTTTCATAAGTTCTCATAAC+CGG - chr1_2:64066051-64066070 None:intergenic 30.0%
!!! TCACCAGCTGTTTTTATTTT+CGG + chr1_2:64066086-64066105 Msa0084530:intron 30.0%
!!! GTTTTTTTCATGAGCTATCT+TGG - chr1_2:64066130-64066149 None:intergenic 30.0%
ATTAAGCTGTTTATCCAAAC+AGG + chr1_2:64066234-64066253 Msa0084530:intron 30.0%
TTAAGCTGTTTATCCAAACA+GGG + chr1_2:64066235-64066254 Msa0084530:intron 30.0%
!! GCTTTTTCCTTGCATTTTTT+TGG + chr1_2:64066496-64066515 Msa0084530:intron 30.0%
!!! TTTATTTTTGTTGCTTCAGG+AGG + chr1_2:64066642-64066661 Msa0084530:intron 30.0%
TTGGCCATTCAAAAATTCAA+TGG + chr1_2:64066757-64066776 Msa0084530:intron 30.0%
AAAAATCACTGTATTGTGAG+AGG + chr1_2:64066948-64066967 Msa0084530:intron 30.0%
!! ATTTGTCATCATGATTTGGT+AGG + chr1_2:64067023-64067042 Msa0084530:intron 30.0%
TGAGAGAGATAACTTCAATA+TGG + chr1_2:64067046-64067065 Msa0084530:CDS 30.0%
ATCCAAGTTCCAAACTTTAT+GGG - chr1_2:64067440-64067459 None:intergenic 30.0%
! ATAAAGTTTGGAACTTGGAT+GGG + chr1_2:64067440-64067459 Msa0084530:CDS 30.0%
!!! TCTTTCGTAGTTTTGTTATG+GGG + chr1_2:64067618-64067637 Msa0084530:intron 30.0%
GATTTGAGCTATCTATGAAT+CGG + chr1_2:64067841-64067860 Msa0084530:CDS 30.0%
TCGAAGTAACAAGATTGAAT+TGG - chr1_2:64068067-64068086 None:intergenic 30.0%
! TACTTTAGAAGAAAGATGTG+AGG - chr1_2:64068120-64068139 None:intergenic 30.0%
AATTGGAATTAAGAATGGAG+AGG + chr1_2:64068151-64068170 Msa0084530:intron 30.0%
ATTGGAATTAAGAATGGAGA+GGG + chr1_2:64068152-64068171 Msa0084530:intron 30.0%
CAGAAAGTCAAAAATATCTG+AGG - chr1_2:64068532-64068551 None:intergenic 30.0%
! ATTCTATTTTGTCATGCATG+AGG + chr1_2:64068646-64068665 Msa0084530:intron 30.0%
!! GTTACTGATACTTTAAGACT+GGG - chr1_2:64068887-64068906 None:intergenic 30.0%
!! TGTTACTGATACTTTAAGAC+TGG - chr1_2:64068888-64068907 None:intergenic 30.0%
ACAAGTTCAGAAAATTCCAA+TGG + chr1_2:64068905-64068924 Msa0084530:CDS 30.0%
AATTGAAGATGAAGAACCAT+TGG - chr1_2:64068924-64068943 None:intergenic 30.0%
!!! TATTGGTTTCTTGGCATTTT+CGG + chr1_2:64069215-64069234 Msa0084530:intron 30.0%
! CATAATTTTCTGATTGAGAC+TGG + chr1_2:64069340-64069359 Msa0084530:intron 30.0%
GATGGATAGATGTAGATTAT+TGG - chr1_2:64069396-64069415 None:intergenic 30.0%
TACAATACACCAATAATGGT+GGG - chr1_2:64069494-64069513 None:intergenic 30.0%
TGCATTATCAGAATATCTAC+TGG + chr1_2:64069592-64069611 Msa0084530:intron 30.0%
! GCTGTTTCATAATAATCCAA+AGG - chr1_2:64069771-64069790 None:intergenic 30.0%
CTTCATTAAAACCATTCCAA+AGG - chr1_2:64069978-64069997 None:intergenic 30.0%
TGATGCAGTTACAACATATT+TGG + chr1_2:64070109-64070128 Msa0084530:CDS 30.0%
ATATGGGTACTTATAGTGAA+TGG + chr1_2:64070132-64070151 Msa0084530:CDS 30.0%
TTAGCTGTATATCTTGTGTT+AGG + chr1_2:64070280-64070299 Msa0084530:intron 30.0%
!! CATACGAGTCTATTTTGAAA+AGG + chr1_2:64070307-64070326 Msa0084530:intron 30.0%
!! TGTCCAATTTTGATGTCATA+TGG + chr1_2:64070378-64070397 Msa0084530:intron 30.0%
TCTCCATATGACATCAAAAT+TGG - chr1_2:64070384-64070403 None:intergenic 30.0%
! CAAACATTGATAGACCATTT+TGG + chr1_2:64070451-64070470 Msa0084530:intron 30.0%
! GAAAAGCTAAAACTTGTTTC+TGG + chr1_2:64070672-64070691 Msa0084530:intron 30.0%
CAGAATTTATTCATTCACTC+AGG - chr1_2:64070732-64070751 None:intergenic 30.0%
! GAAAAGCTAAAACTTGTTTC+TGG + chr1_2:64070672-64070691 Msa0084530:intron 30.0%
CAGAATTTATTCATTCACTC+AGG - chr1_2:64070732-64070751 None:intergenic 30.0%
TGAGACTATTAAGAAGTGAA+TGG - chr1_2:64070927-64070946 None:intergenic 30.0%
TATTGTACTTGTTTCACTCT+CGG + chr1_2:64070981-64071000 Msa0084530:intron 30.0%
TTGTAGTCATAATTTCAAGG+TGG - chr1_2:64071203-64071222 None:intergenic 30.0%
GATCAGACTAATTGAAAGAA+AGG - chr1_2:64071392-64071411 None:intergenic 30.0%
CACCAACACTTATTATGATA+AGG + chr1_2:64071504-64071523 Msa0084530:intron 30.0%
!!! TTTGGATTGGCTTATTTTGT+GGG - chr1_2:64071707-64071726 None:intergenic 30.0%
! GACATATTTACATTAGGTTG+CGG + chr1_2:64071765-64071784 Msa0084530:intron 30.0%
! ACATATTTACATTAGGTTGC+GGG + chr1_2:64071766-64071785 Msa0084530:intron 30.0%
! GGAAACTTTTATCAATAGAC+TGG + chr1_2:64071843-64071862 Msa0084530:CDS 30.0%
AAATCTGTATATGCAGGTTA+TGG + chr1_2:64071980-64071999 Msa0084530:intron 30.0%
ATAACCTGCTTGAAACTTAA+TGG + chr1_2:64072254-64072273 Msa0084530:intron 30.0%
!! TTTTTGGTACATCAATGGTA+TGG + chr1_2:64072301-64072320 Msa0084530:intron 30.0%
TGTTAATGGTTTCAACTTCT+AGG + chr1_2:64072357-64072376 Msa0084530:intron 30.0%
! GTGACAAACATTTGGAATAT+TGG + chr1_2:64072405-64072424 Msa0084530:intron 30.0%
! GTTTAACCATGAAACTGTTT+TGG + chr1_2:64072473-64072492 Msa0084530:intron 30.0%
ATTCAACCAAAACAGTTTCA+TGG - chr1_2:64072482-64072501 None:intergenic 30.0%
! TAAAACTTGTTCCTTAAGAC+TGG - chr1_2:64072644-64072663 None:intergenic 30.0%
GCAAAAATTTATGTTTCCCA+TGG + chr1_2:64072700-64072719 Msa0084530:intron 30.0%
TACAATAGACCTTATTGAGA+TGG + chr1_2:64073206-64073225 Msa0084530:intron 30.0%
AGAAACTTCAGCAGAATAAT+AGG + chr1_2:64073467-64073486 Msa0084530:CDS 30.0%
! ATGTTGACTGGTGTGTTAAA+GGG - chr1_2:64065167-64065186 None:intergenic 35.0%
! AATGTTGACTGGTGTGTTAA+AGG - chr1_2:64065168-64065187 None:intergenic 35.0%
!! TCTTTCGAGTTTGTCAACAA+AGG - chr1_2:64065475-64065494 None:intergenic 35.0%
! TTGCTCTGTTTCCTTTTATG+GGG + chr1_2:64065625-64065644 Msa0084530:intron 35.0%
! AGATTTTCACATTCAGCAAG+GGG - chr1_2:64065662-64065681 None:intergenic 35.0%
AGCCGTAGATTATTTACCTA+TGG - chr1_2:64065927-64065946 None:intergenic 35.0%
!!! TCCAAATTTCGGTTTTGGAT+TGG + chr1_2:64065986-64066005 Msa0084530:intron 35.0%
AACATAAGCACTTGTATGAC+CGG + chr1_2:64066029-64066048 Msa0084530:intron 35.0%
AAGCCGAAAATAAAAACAGC+TGG - chr1_2:64066092-64066111 None:intergenic 35.0%
TGATTACCATTACCCTATGT+AGG - chr1_2:64066261-64066280 None:intergenic 35.0%
AACAGAAATTACGTGTTCAC+AGG + chr1_2:64066283-64066302 Msa0084530:intron 35.0%
ACAGAAATTACGTGTTCACA+GGG + chr1_2:64066284-64066303 Msa0084530:intron 35.0%
ACTGTGTTGTAAAGATCATC+CGG - chr1_2:64066390-64066409 None:intergenic 35.0%
TTAACTGATTGAAACACCAG+CGG - chr1_2:64066603-64066622 None:intergenic 35.0%
!! GTTCGTCGATTAATTTGTGT+GGG - chr1_2:64066691-64066710 None:intergenic 35.0%
!! TGTTCGTCGATTAATTTGTG+TGG - chr1_2:64066692-64066711 None:intergenic 35.0%
CACTGCAATACAAACACATT+CGG + chr1_2:64066710-64066729 Msa0084530:CDS 35.0%
! CTTCAACATGTAGCATCTTT+TGG + chr1_2:64066836-64066855 Msa0084530:intron 35.0%
TTAGCATTTCTCGATCTTCA+GGG - chr1_2:64066887-64066906 None:intergenic 35.0%
ATTAGCATTTCTCGATCTTC+AGG - chr1_2:64066888-64066907 None:intergenic 35.0%
AGATCGAGAAATGCTAATTG+AGG + chr1_2:64066890-64066909 Msa0084530:CDS 35.0%
AGAAATGCTAATTGAGGATC+TGG + chr1_2:64066896-64066915 Msa0084530:CDS 35.0%
ATTGTATATGTCAGGTCTTC+TGG + chr1_2:64067146-64067165 Msa0084530:intron 35.0%
TCTCACAGGTTTGAATATAG+TGG + chr1_2:64067236-64067255 Msa0084530:intron 35.0%
!! TGTCAGCAATGCTTTAAAGA+AGG + chr1_2:64067299-64067318 Msa0084530:CDS 35.0%
GGTCTATCATCTTGAATTCT+TGG + chr1_2:64067320-64067339 Msa0084530:intron 35.0%
CATCCAAGTTCCAAACTTTA+TGG - chr1_2:64067441-64067460 None:intergenic 35.0%
! CATAAAGTTTGGAACTTGGA+TGG + chr1_2:64067439-64067458 Msa0084530:CDS 35.0%
GTTAAAAAAGCTCACCTTTG+CGG - chr1_2:64067495-64067514 None:intergenic 35.0%
!!! CTTTCGTAGTTTTGTTATGG+GGG + chr1_2:64067619-64067638 Msa0084530:intron 35.0%
! TGTTTTTCTGTTTGTTCCTC+AGG + chr1_2:64067746-64067765 Msa0084530:intron 35.0%
CTGTTTCACTTCTATCTAGA+TGG + chr1_2:64067778-64067797 Msa0084530:CDS 35.0%
TTCACTTCTATCTAGATGGA+TGG + chr1_2:64067782-64067801 Msa0084530:CDS 35.0%
TGGCTATTGACCTCTATATT+CGG + chr1_2:64067802-64067821 Msa0084530:CDS 35.0%
TCATAGATAGCTCAAATCTG+AGG - chr1_2:64067839-64067858 None:intergenic 35.0%
CTAGCACATGAAATTCTAGA+AGG + chr1_2:64067885-64067904 Msa0084530:CDS 35.0%
GTCACATGATAGAAGACAAA+AGG - chr1_2:64067972-64067991 None:intergenic 35.0%
! GACATAAGATTGACTTCAAC+TGG + chr1_2:64068219-64068238 Msa0084530:intron 35.0%
TTATGTGTACCAGCAAAAGA+GGG - chr1_2:64068429-64068448 None:intergenic 35.0%
ATTATGTGTACCAGCAAAAG+AGG - chr1_2:64068430-64068449 None:intergenic 35.0%
ATTTCTCGTGCAATCAGAAA+GGG - chr1_2:64068593-64068612 None:intergenic 35.0%
TATTTCTCGTGCAATCAGAA+AGG - chr1_2:64068594-64068613 None:intergenic 35.0%
AATTGATCTACCTTGTGATC+AGG - chr1_2:64068754-64068773 None:intergenic 35.0%
GTAGATCAATTCAGTGTTTG+TGG + chr1_2:64068763-64068782 Msa0084530:intron 35.0%
! GTAAATTTCCTCTGAGAAAG+CGG - chr1_2:64068977-64068996 None:intergenic 35.0%
AAATTTACAGAATCCCAGAC+AGG + chr1_2:64068989-64069008 Msa0084530:CDS 35.0%
! CTCTAAAAGCTTCTGAAAAC+TGG - chr1_2:64069020-64069039 None:intergenic 35.0%
! GTATTGCTTCAGATTGATTC+CGG + chr1_2:64069106-64069125 Msa0084530:intron 35.0%
!! CTTGCATGTTATTGGTTTCT+TGG + chr1_2:64069206-64069225 Msa0084530:intron 35.0%
GTACAATACACCAATAATGG+TGG - chr1_2:64069495-64069514 None:intergenic 35.0%
TGCGTACAATACACCAATAA+TGG - chr1_2:64069498-64069517 None:intergenic 35.0%
CAAACCTTTCATGAAAGAGA+GGG - chr1_2:64069850-64069869 None:intergenic 35.0%
ACAAACCTTTCATGAAAGAG+AGG - chr1_2:64069851-64069870 None:intergenic 35.0%
GGAGAGTTAAATAGCAATTG+TGG - chr1_2:64069881-64069900 None:intergenic 35.0%
TTCTTAACAAGAGAGCTGAA+AGG + chr1_2:64070176-64070195 Msa0084530:CDS 35.0%
TCAGGCAACAAAAGTAATTC+CGG - chr1_2:64070714-64070733 None:intergenic 35.0%
TGTGATCATTTCAAAGTTCG+TGG + chr1_2:64071034-64071053 Msa0084530:intron 35.0%
AGTTCGTGGCAATTTATGAT+TGG + chr1_2:64071048-64071067 Msa0084530:intron 35.0%
AAGACTTCTTTAACATCAGC+AGG - chr1_2:64071094-64071113 None:intergenic 35.0%
TGCTGATGTTAAAGAAGTCT+TGG + chr1_2:64071093-64071112 Msa0084530:CDS 35.0%
! TGGACTTTTGCTTGTTTATC+AGG + chr1_2:64071266-64071285 Msa0084530:intron 35.0%
TCAAAAAGTTACTTGCCCAT+AGG + chr1_2:64071445-64071464 Msa0084530:intron 35.0%
CAAAAAGTTACTTGCCCATA+GGG + chr1_2:64071446-64071465 Msa0084530:intron 35.0%
TTTATCAAAACAGGCCCTAT+GGG - chr1_2:64071463-64071482 None:intergenic 35.0%
GCCCTTATCATAATAAGTGT+TGG - chr1_2:64071509-64071528 None:intergenic 35.0%
GCTTATGTATAAGCTTGCAT+AGG + chr1_2:64071527-64071546 Msa0084530:intron 35.0%
!!! GTTTGGATTGGCTTATTTTG+TGG - chr1_2:64071708-64071727 None:intergenic 35.0%
CAAAATAAGCCAATCCAAAC+AGG + chr1_2:64071708-64071727 Msa0084530:intron 35.0%
ATGGTTGGATATTCTGATTC+TGG + chr1_2:64071999-64072018 Msa0084530:CDS 35.0%
ACTGAATAGCCAGATATGTA+GGG - chr1_2:64072160-64072179 None:intergenic 35.0%
CATACCATTAAGTTTCAAGC+AGG - chr1_2:64072261-64072280 None:intergenic 35.0%
GCTTGAAACTTAATGGTATG+AGG + chr1_2:64072261-64072280 Msa0084530:intron 35.0%
!!! GATGGTGGCTGTAATTTTTT+TGG + chr1_2:64072285-64072304 Msa0084530:intron 35.0%
! TGTCACTTATTTACGATCCA+AGG - chr1_2:64072391-64072410 None:intergenic 35.0%
AAATGGTAGAGGCTAAGTTT+GGG + chr1_2:64072761-64072780 Msa0084530:CDS 35.0%
! GATTTTCGTAGACTACATTG+CGG - chr1_2:64072927-64072946 None:intergenic 35.0%
! ACCTTATTGAGATGGTGTTA+GGG + chr1_2:64073214-64073233 Msa0084530:intron 35.0%
CTTTGCTTATCACCGTAAAT+GGG + chr1_2:64073605-64073624 Msa0084530:CDS 35.0%
! TGTTGACTGGTGTGTTAAAG+GGG - chr1_2:64065166-64065185 None:intergenic 40.0%
CTTAGTGTAGCAATGTTGAC+TGG - chr1_2:64065179-64065198 None:intergenic 40.0%
TACAATCATCATCGAAGCTC+TGG - chr1_2:64065401-64065420 None:intergenic 40.0%
AGAGCTTCGATGATGATTGT+AGG + chr1_2:64065400-64065419 Msa0084530:CDS 40.0%
GATGATGATTGTAGGTTGCT+TGG + chr1_2:64065408-64065427 Msa0084530:CDS 40.0%
! TTCGAGTTTGTCAACAAAGG+TGG - chr1_2:64065472-64065491 None:intergenic 40.0%
AGTGGGGTATGAAGAAAAAG+TGG - chr1_2:64065548-64065567 None:intergenic 40.0%
GCCAATCCAAAACCGAAATT+TGG - chr1_2:64065990-64066009 None:intergenic 40.0%
TGTGTTGTAAAGATCATCCG+GGG - chr1_2:64066388-64066407 None:intergenic 40.0%
CTGTGTTGTAAAGATCATCC+GGG - chr1_2:64066389-64066408 None:intergenic 40.0%
TTACAACACAGTCTGCAAAC+AGG + chr1_2:64066398-64066417 Msa0084530:CDS 40.0%
! AGCTTTATAGTGACGTGCAA+TGG - chr1_2:64066479-64066498 None:intergenic 40.0%
GAATGTAATGTCTATACCGC+TGG + chr1_2:64066584-64066603 Msa0084530:intron 40.0%
CTGACACGTCGTAAATAATG+AGG - chr1_2:64067285-64067304 None:intergenic 40.0%
! CTATCCATTTTGCAGCATAC+TGG + chr1_2:64067389-64067408 Msa0084530:intron 40.0%
CTTTCCAGTATGCTGCAAAA+TGG - chr1_2:64067396-64067415 None:intergenic 40.0%
ACTTGCACTCCCATAAAGTT+TGG + chr1_2:64067428-64067447 Msa0084530:CDS 40.0%
! CTCCCATAAAGTTTGGAACT+TGG + chr1_2:64067435-64067454 Msa0084530:CDS 40.0%
AAATCCAAACGTTACCGCAA+AGG + chr1_2:64067478-64067497 Msa0084530:CDS 40.0%
GGCTATTGACCTCTATATTC+GGG + chr1_2:64067803-64067822 Msa0084530:CDS 40.0%
TATCCACTTCCCGAATATAG+AGG - chr1_2:64067815-64067834 None:intergenic 40.0%
ACTTTCAACGAACAGCGTTT+GGG - chr1_2:64067996-64068015 None:intergenic 40.0%
TACTTTCAACGAACAGCGTT+TGG - chr1_2:64067997-64068016 None:intergenic 40.0%
! TAGCCACTTCTAAGAGTTGA+TGG + chr1_2:64068293-64068312 Msa0084530:intron 40.0%
TGACCATCAACTCTTAGAAG+TGG - chr1_2:64068299-64068318 None:intergenic 40.0%
! AAGTGACTGACTTCTATTCG+TGG - chr1_2:64068376-64068395 None:intergenic 40.0%
TCGACAGATCATTTGAGTGT+CGG - chr1_2:64068563-64068582 None:intergenic 40.0%
TTTCTCGTGCAATCAGAAAG+GGG - chr1_2:64068592-64068611 None:intergenic 40.0%
TCATGCATGAGGAATGATGA+GGG + chr1_2:64068657-64068676 Msa0084530:intron 40.0%
GGTTGACTAGAGTTGTAAGA+GGG - chr1_2:64068956-64068975 None:intergenic 40.0%
AAAACTGGACTTTCCTGTCT+GGG - chr1_2:64069005-64069024 None:intergenic 40.0%
TTTCCCAGGACAACTCTATA+AGG - chr1_2:64069073-64069092 None:intergenic 40.0%
AGTTGTCCTGGGAAATGTAA+AGG + chr1_2:64069078-64069097 Msa0084530:CDS 40.0%
CCTTATCCTTTACATTTCCC+AGG - chr1_2:64069087-64069106 None:intergenic 40.0%
CCTGGGAAATGTAAAGGATA+AGG + chr1_2:64069084-64069103 Msa0084530:CDS 40.0%
ACGGAAGATGTAGAAATGCA+AGG - chr1_2:64069261-64069280 None:intergenic 40.0%
GCTATAAAAAAAGGGCAACC+CGG + chr1_2:64069427-64069446 Msa0084530:intron 40.0%
CCTGTGTAAAAAACAGGGTA+AGG - chr1_2:64069522-64069541 None:intergenic 40.0%
!!! CCTTACCCTGTTTTTTACAC+AGG + chr1_2:64069519-64069538 Msa0084530:intron 40.0%
!!! TACCCTGTTTTTTACACAGG+AGG + chr1_2:64069522-64069541 Msa0084530:intron 40.0%
AGCCTCCTGTGTAAAAAACA+GGG - chr1_2:64069527-64069546 None:intergenic 40.0%
! GAAGAAGTTCTAACCGTCTA+CGG - chr1_2:64069722-64069741 None:intergenic 40.0%
ACGGTTAGAACTTCTTCTTG+AGG + chr1_2:64069725-64069744 Msa0084530:CDS 40.0%
TGCATGTGACTATGATCCTT+TGG + chr1_2:64069752-64069771 Msa0084530:CDS 40.0%
GTACCAGAGATTCATAACAG+AGG - chr1_2:64069818-64069837 None:intergenic 40.0%
CATGTCTTCAGCAATCATGT+GGG + chr1_2:64069900-64069919 Msa0084530:intron 40.0%
ATTCGTAGAGTTGCAACCTT+TGG + chr1_2:64069959-64069978 Msa0084530:CDS 40.0%
! TAGAGTTGCAACCTTTGGAA+TGG + chr1_2:64069964-64069983 Msa0084530:CDS 40.0%
AATGAAGCTTGATTTACGCC+AGG + chr1_2:64069991-64070010 Msa0084530:CDS 40.0%
TAGCTGCATTACAGGAATCT+GGG + chr1_2:64070069-64070088 Msa0084530:intron 40.0%
TCCATACTAACAGGTACTAG+TGG - chr1_2:64070209-64070228 None:intergenic 40.0%
ACTAGTACCTGTTAGTATGG+AGG + chr1_2:64070208-64070227 Msa0084530:CDS 40.0%
TGGAAATGCAGTTAAGACTC+CGG + chr1_2:64070692-64070711 Msa0084530:intron 40.0%
CTGGAAATGCAGTTAAGACT+CGG + chr1_2:64070691-64070710 Msa0084530:intron 40.0%
TGGAAATGCAGTTAAGACTC+GGG + chr1_2:64070692-64070711 Msa0084530:intron 40.0%
AGGAGCCTATGTGATATCTA+TGG + chr1_2:64071156-64071175 Msa0084530:CDS 40.0%
GGCAATTATTCATACACTCG+AGG - chr1_2:64071182-64071201 None:intergenic 40.0%
TCTGTAAAAGCTCTACTGCA+AGG - chr1_2:64071302-64071321 None:intergenic 40.0%
! TGCAGTAGAGCTTTTACAGA+AGG + chr1_2:64071302-64071321 Msa0084530:CDS 40.0%
! AGCTTTTACAGAAGGATGCA+CGG + chr1_2:64071310-64071329 Msa0084530:CDS 40.0%
CTTGCTGCTATTGGAGAATT+GGG + chr1_2:64071333-64071352 Msa0084530:CDS 40.0%
GTTTATCAAAACAGGCCCTA+TGG - chr1_2:64071464-64071483 None:intergenic 40.0%
ATACAGATATAGGGCCTGTT+TGG - chr1_2:64071725-64071744 None:intergenic 40.0%
CCTTCACGGTTTCAAATAGA+GGG - chr1_2:64071796-64071815 None:intergenic 40.0%
TCCTTCACGGTTTCAAATAG+AGG - chr1_2:64071797-64071816 None:intergenic 40.0%
CACGTCATTAAGAACCACAA+TGG + chr1_2:64071875-64071894 Msa0084530:CDS 40.0%
CTGTATATGCAGGTTATGGT+TGG + chr1_2:64071984-64072003 Msa0084530:intron 40.0%
TCTGATTCTGGTAAAGATGC+TGG + chr1_2:64072011-64072030 Msa0084530:CDS 40.0%
TTGGGAACTTTACAAAGCTC+AGG + chr1_2:64072049-64072068 Msa0084530:CDS 40.0%
GTAGCTGCTTGCAATGATTA+TGG + chr1_2:64072080-64072099 Msa0084530:CDS 40.0%
GACTGAATAGCCAGATATGT+AGG - chr1_2:64072161-64072180 None:intergenic 40.0%
AACTTAATGGTATGAGGCGA+TGG + chr1_2:64072267-64072286 Msa0084530:intron 40.0%
!! ATGAGAGGTTGGTGTGTTAA+TGG + chr1_2:64072343-64072362 Msa0084530:intron 40.0%
!! ACTTCTAGGACTTGATTCCT+TGG + chr1_2:64072371-64072390 Msa0084530:intron 40.0%
! GAGTCTTATGACCAGTCTTA+AGG + chr1_2:64072630-64072649 Msa0084530:intron 40.0%
GAAATGGTAGAGGCTAAGTT+TGG + chr1_2:64072760-64072779 Msa0084530:CDS 40.0%
AGTTGTCTAACAGCTATCTG+TGG - chr1_2:64072790-64072809 None:intergenic 40.0%
! ACTACGCCAATTTTCATCTC+GGG - chr1_2:64072866-64072885 None:intergenic 40.0%
! GACTACGCCAATTTTCATCT+CGG - chr1_2:64072867-64072886 None:intergenic 40.0%
TGAAAATTGGCGTAGTCTCA+TGG + chr1_2:64072870-64072889 Msa0084530:CDS 40.0%
TGGAAGTAAGAAAGGAACTC+TGG - chr1_2:64072949-64072968 None:intergenic 40.0%
TTGTGTTCTTCCTTCTTGCA+GGG - chr1_2:64073020-64073039 None:intergenic 40.0%
TTTGTGTTCTTCCTTCTTGC+AGG - chr1_2:64073021-64073040 None:intergenic 40.0%
TGCAAGAAGGAAGAACACAA+AGG + chr1_2:64073020-64073039 Msa0084530:CDS 40.0%
GCAAGAAGGAAGAACACAAA+GGG + chr1_2:64073021-64073040 Msa0084530:CDS 40.0%
AGGAAGAACACAAAGGGAAT+TGG + chr1_2:64073027-64073046 Msa0084530:CDS 40.0%
!! TTGAAAGGTGCTTGTGAGAA+AGG + chr1_2:64073132-64073151 Msa0084530:CDS 40.0%
TGCTTGTGAGAAAGGTCATA+GGG + chr1_2:64073140-64073159 Msa0084530:CDS 40.0%
GACCTTATTGAGATGGTGTT+AGG + chr1_2:64073213-64073232 Msa0084530:intron 40.0%
TCCCTAACACCATCTCAATA+AGG - chr1_2:64073218-64073237 None:intergenic 40.0%
AAGGGCTTCATCATAGTACT+TGG - chr1_2:64073359-64073378 None:intergenic 40.0%
AAGTTTGTGCTCGTGATTAG+TGG + chr1_2:64073439-64073458 Msa0084530:CDS 40.0%
AGTTTGTGCTCGTGATTAGT+GGG + chr1_2:64073440-64073459 Msa0084530:CDS 40.0%
AGCAGAATAATAGGAGCTTG+AGG + chr1_2:64073476-64073495 Msa0084530:CDS 40.0%
AGAATAATAGGAGCTTGAGG+AGG + chr1_2:64073479-64073498 Msa0084530:CDS 40.0%
AGGTTCATGGGATTGAGAAA+TGG - chr1_2:64073523-64073542 None:intergenic 40.0%
! GCAAAGCATCTCTGAGTTTA+AGG - chr1_2:64073591-64073610 None:intergenic 40.0%
GCTTTGCTTATCACCGTAAA+TGG + chr1_2:64073604-64073623 Msa0084530:CDS 40.0%
TCAAACAAAGAAGCGACACG+TGG - chr1_2:64065232-64065251 None:intergenic 45.0%
GACATTCTTCACCGTGAAGT+TGG + chr1_2:64065444-64065463 Msa0084530:CDS 45.0%
CAAAGGTGGTACCAACTTCA+CGG - chr1_2:64065458-64065477 None:intergenic 45.0%
!! TGAAGCACTGACACATACAC+CGG + chr1_2:64065683-64065702 Msa0084530:intron 45.0%
! CTTCTGATCAAAGGTGTGTC+CGG - chr1_2:64065705-64065724 None:intergenic 45.0%
GGCAGAGTGCATGTAATATG+AGG + chr1_2:64065761-64065780 Msa0084530:intron 45.0%
GCATGTAATATGAGGCAAGC+AGG + chr1_2:64065769-64065788 Msa0084530:CDS 45.0%
GCAAGCAGGTATAGTGAACA+TGG + chr1_2:64065783-64065802 Msa0084530:CDS 45.0%
GTATAGCCGAAACTCACCAT+AGG + chr1_2:64065908-64065927 Msa0084530:CDS 45.0%
TATCCAAACAGGGCCTACAT+AGG + chr1_2:64066245-64066264 Msa0084530:intron 45.0%
ATCCAAACAGGGCCTACATA+GGG + chr1_2:64066246-64066265 Msa0084530:intron 45.0%
TTCACAGGGTTCGTAAAGGA+GGG + chr1_2:64066298-64066317 Msa0084530:intron 45.0%
GGTTCGTAAAGGAGGGAATA+TGG + chr1_2:64066305-64066324 Msa0084530:CDS 45.0%
TGTGTTTAACCAGCTTGTGC+AGG + chr1_2:64066353-64066372 Msa0084530:CDS 45.0%
GTGTTTAACCAGCTTGTGCA+GGG + chr1_2:64066354-64066373 Msa0084530:CDS 45.0%
TATGGCAGACAGATGAGCTT+AGG + chr1_2:64067064-64067083 Msa0084530:CDS 45.0%
!! CATCAACTGGAGTGGGTTTT+TGG - chr1_2:64067092-64067111 None:intergenic 45.0%
CTAGCTTCATCAACTGGAGT+GGG - chr1_2:64067099-64067118 None:intergenic 45.0%
! TCTAGCTTCATCAACTGGAG+TGG - chr1_2:64067100-64067119 None:intergenic 45.0%
! ATATAGTGGAGCAGTCACTC+TGG + chr1_2:64067250-64067269 Msa0084530:CDS 45.0%
! TTTATGGGAGTGCAAGTCAG+TGG - chr1_2:64067425-64067444 None:intergenic 45.0%
! AAGTTTGGAACTTGGATGGG+AGG + chr1_2:64067443-64067462 Msa0084530:CDS 45.0%
! AATCGCTGATAGTGAGCACT+TGG - chr1_2:64067524-64067543 None:intergenic 45.0%
!!! TCGTAGTTTTGTTATGGGGG+TGG + chr1_2:64067622-64067641 Msa0084530:intron 45.0%
! GAAACAGCTTTTGTGACCTG+AGG - chr1_2:64067765-64067784 None:intergenic 45.0%
TGACCTCTATATTCGGGAAG+TGG + chr1_2:64067809-64067828 Msa0084530:CDS 45.0%
GAGATTCTTCCTAGTGCCAA+GGG + chr1_2:64067934-64067953 Msa0084530:intron 45.0%
AAGGTGAATGCTAAGTCCCT+TGG - chr1_2:64067953-64067972 None:intergenic 45.0%
! TGGACTGATTCCAACTCTCA+TGG - chr1_2:64068356-64068375 None:intergenic 45.0%
! GCTCATTTACCCTCTTTTGC+TGG + chr1_2:64068417-64068436 Msa0084530:CDS 45.0%
GTCATGCATGAGGAATGATG+AGG + chr1_2:64068656-64068675 Msa0084530:intron 45.0%
CATGCATGAGGAATGATGAG+GGG + chr1_2:64068658-64068677 Msa0084530:intron 45.0%
! GTTCTGAGTGTAGTTGGACT+TGG - chr1_2:64068857-64068876 None:intergenic 45.0%
AGTCCAACTACACTCAGAAC+TGG + chr1_2:64068857-64068876 Msa0084530:CDS 45.0%
!! TTGCCAGTTCTGAGTGTAGT+TGG - chr1_2:64068863-64068882 None:intergenic 45.0%
GAGTTGTAAGAGGGAGAAGA+TGG - chr1_2:64068947-64068966 None:intergenic 45.0%
CGGTTGACTAGAGTTGTAAG+AGG - chr1_2:64068957-64068976 None:intergenic 45.0%
GAAAACTGGACTTTCCTGTC+TGG - chr1_2:64069006-64069025 None:intergenic 45.0%
! GAGCAATTCCAGCAAGTTGA+GGG - chr1_2:64069051-64069070 None:intergenic 45.0%
TGCTCCTTATAGAGTTGTCC+TGG + chr1_2:64069066-64069085 Msa0084530:CDS 45.0%
GCTCCTTATAGAGTTGTCCT+GGG + chr1_2:64069067-64069086 Msa0084530:CDS 45.0%
CAGCCTCCTGTGTAAAAAAC+AGG - chr1_2:64069528-64069547 None:intergenic 45.0%
! TGAAACAGCTGACCAGCTTT+TGG + chr1_2:64069782-64069801 Msa0084530:CDS 45.0%
GATTCATAACAGAGGAGCAG+AGG - chr1_2:64069810-64069829 None:intergenic 45.0%
GCTCCTCTGTTATGAATCTC+TGG + chr1_2:64069812-64069831 Msa0084530:CDS 45.0%
CCTTTCATGAAAGAGAGGGA+AGG - chr1_2:64069846-64069865 None:intergenic 45.0%
CCTTCCCTCTCTTTCATGAA+AGG + chr1_2:64069843-64069862 Msa0084530:intron 45.0%
CCACATGATTGCTGAAGACA+TGG - chr1_2:64069902-64069921 None:intergenic 45.0%
CCATGTCTTCAGCAATCATG+TGG + chr1_2:64069899-64069918 Msa0084530:intron 45.0%
TTCAGCAATCATGTGGGTCT+GGG + chr1_2:64069906-64069925 Msa0084530:intron 45.0%
! CCTGTAATGCAGCTAGTTTC+AGG - chr1_2:64070064-64070083 None:intergenic 45.0%
CCTGAAACTAGCTGCATTAC+AGG + chr1_2:64070061-64070080 Msa0084530:intron 45.0%
CTAGCTGCATTACAGGAATC+TGG + chr1_2:64070068-64070087 Msa0084530:intron 45.0%
CAAGAGAGCTGAAAGGAAAG+AGG + chr1_2:64070183-64070202 Msa0084530:CDS 45.0%
GCCACTAGTACCTGTTAGTA+TGG + chr1_2:64070205-64070224 Msa0084530:CDS 45.0%
TGTCTCACCTCCATACTAAC+AGG - chr1_2:64070218-64070237 None:intergenic 45.0%
TGGAATGATGCAGCAGATCA+AGG - chr1_2:64070561-64070580 None:intergenic 45.0%
! GAACTAGGGAGCGATTTTCT+AGG + chr1_2:64071136-64071155 Msa0084530:CDS 45.0%
CGAGGCCATAGATATCACAT+AGG - chr1_2:64071164-64071183 None:intergenic 45.0%
! GCTTGCTGCTATTGGAGAAT+TGG + chr1_2:64071332-64071351 Msa0084530:CDS 45.0%
GATATAGGGCCTGTTTGGAT+TGG - chr1_2:64071720-64071739 None:intergenic 45.0%
! CCCTCTATTTGAAACCGTGA+AGG + chr1_2:64071793-64071812 Msa0084530:CDS 45.0%
TAACTGAACCAGCACCTCTT+AGG - chr1_2:64071820-64071839 None:intergenic 45.0%
GAACCACAATGGACATCAAG+AGG + chr1_2:64071886-64071905 Msa0084530:CDS 45.0%
GGAACTTTACAAAGCTCAGG+AGG + chr1_2:64072052-64072071 Msa0084530:CDS 45.0%
TTAATGGTATGAGGCGATGG+TGG + chr1_2:64072270-64072289 Msa0084530:intron 45.0%
AACACACCAACCTCTCATGT+GGG - chr1_2:64072341-64072360 None:intergenic 45.0%
TAACACACCAACCTCTCATG+TGG - chr1_2:64072342-64072361 None:intergenic 45.0%
ATTCAGAAACGAGCTGTCAG+CGG - chr1_2:64072667-64072686 None:intergenic 45.0%
TGTTTCCCATGGTGTATTGC+AGG + chr1_2:64072711-64072730 Msa0084530:intron 45.0%
GTTTCCCATGGTGTATTGCA+GGG + chr1_2:64072712-64072731 Msa0084530:intron 45.0%
TGTTCCCTGCAATACACCAT+GGG - chr1_2:64072719-64072738 None:intergenic 45.0%
GTGTATTGCAGGGAACACTT+CGG + chr1_2:64072722-64072741 Msa0084530:intron 45.0%
! CTACGCCAATTTTCATCTCG+GGG - chr1_2:64072865-64072884 None:intergenic 45.0%
TGGCTTCGTGGAAGTAAGAA+AGG - chr1_2:64072957-64072976 None:intergenic 45.0%
! AAACCTTCGTGCTATTCCCT+GGG + chr1_2:64073050-64073069 Msa0084530:CDS 45.0%
CTATTCCCTGGGTATTTGCT+TGG + chr1_2:64073061-64073080 Msa0084530:CDS 45.0%
TGAGTCCAAGCAAATACCCA+GGG - chr1_2:64073069-64073088 None:intergenic 45.0%
TTGAGTCCAAGCAAATACCC+AGG - chr1_2:64073070-64073089 None:intergenic 45.0%
CCAAGCTGGAAGAACAAATC+TGG - chr1_2:64073094-64073113 None:intergenic 45.0%
! CCAGATTTGTTCTTCCAGCT+TGG + chr1_2:64073091-64073110 Msa0084530:CDS 45.0%
TTTGTTCTTCCAGCTTGGCT+CGG + chr1_2:64073096-64073115 Msa0084530:CDS 45.0%
GTGCTTGTGAGAAAGGTCAT+AGG + chr1_2:64073139-64073158 Msa0084530:CDS 45.0%
! GCACAAACTTTTCAGCTGTC+AGG - chr1_2:64073429-64073448 None:intergenic 45.0%
TAATAGGAGCTTGAGGAGGT+TGG + chr1_2:64073483-64073502 Msa0084530:CDS 45.0%
! TGGAGATTCTGAAGAGGTTG+AGG + chr1_2:64073551-64073570 Msa0084530:CDS 45.0%
!!! TTTTTTTTTCAAAAAAAAAT+TGG - chr1_2:64072234-64072253 None:intergenic 5.0%
TACCCTATGTAGGCCCTGTT+TGG - chr1_2:64066251-64066270 None:intergenic 50.0%
ACAGGGCCTACATAGGGTAA+TGG + chr1_2:64066252-64066271 Msa0084530:intron 50.0%
CGTGTTCACAGGGTTCGTAA+AGG + chr1_2:64066294-64066313 Msa0084530:intron 50.0%
GTTCACAGGGTTCGTAAAGG+AGG + chr1_2:64066297-64066316 Msa0084530:intron 50.0%
TTTAACCAGCTTGTGCAGGG+TGG + chr1_2:64066357-64066376 Msa0084530:CDS 50.0%
CGATCTTCAGGGCTAAGATC+AGG - chr1_2:64066876-64066895 None:intergenic 50.0%
! CCAGCTCTAGCTTCATCAAC+TGG - chr1_2:64067105-64067124 None:intergenic 50.0%
!! CCAGTTGATGAAGCTAGAGC+TGG + chr1_2:64067102-64067121 Msa0084530:CDS 50.0%
TGGATGGGAGGTGATAGAGA+TGG + chr1_2:64067455-64067474 Msa0084530:CDS 50.0%
CTCACCTTTGCGGTAACGTT+TGG - chr1_2:64067485-64067504 None:intergenic 50.0%
! GCTGATAGTGAGCACTTGGA+TGG - chr1_2:64067520-64067539 None:intergenic 50.0%
CGAGATTCTTCCTAGTGCCA+AGG + chr1_2:64067933-64067952 Msa0084530:intron 50.0%
ATGCTAAGTCCCTTGGCACT+AGG - chr1_2:64067946-64067965 None:intergenic 50.0%
ACGAGAATCGCCATGAGAGT+TGG + chr1_2:64068343-64068362 Msa0084530:CDS 50.0%
! GAGGGTAAATGAGCTCTAGC+TGG - chr1_2:64068411-64068430 None:intergenic 50.0%
GCATCCTAGACTAGACATCC+CGG + chr1_2:64068726-64068745 Msa0084530:CDS 50.0%
CATCCTAGACTAGACATCCC+GGG + chr1_2:64068727-64068746 Msa0084530:CDS 50.0%
TCTACCTTGTGATCAGGTCC+CGG - chr1_2:64068748-64068767 None:intergenic 50.0%
CTAGTCAACCGCTTTCTCAG+AGG + chr1_2:64068966-64068985 Msa0084530:CDS 50.0%
GGAGCAATTCCAGCAAGTTG+AGG - chr1_2:64069052-64069071 None:intergenic 50.0%
AGCTTGAGAGAAGCCGTAGA+CGG + chr1_2:64069706-64069725 Msa0084530:intron 50.0%
CTTCAGCAATCATGTGGGTC+TGG + chr1_2:64069905-64069924 Msa0084530:intron 50.0%
TCAGCAATCATGTGGGTCTG+GGG + chr1_2:64069907-64069926 Msa0084530:intron 50.0%
TTCCGAATCGCTGCTGAACT+AGG + chr1_2:64071121-64071140 Msa0084530:CDS 50.0%
TCCGAATCGCTGCTGAACTA+GGG + chr1_2:64071122-64071141 Msa0084530:CDS 50.0%
TCCCTAGTTCAGCAGCGATT+CGG - chr1_2:64071126-64071145 None:intergenic 50.0%
! GAATTGGGAAGAGCATGTCC+TGG + chr1_2:64071348-64071367 Msa0084530:CDS 50.0%
TGTCCTGGTGGAACGTAAGT+AGG + chr1_2:64071363-64071382 Msa0084530:intron 50.0%
GTTCCTACTTACGTTCCACC+AGG - chr1_2:64071369-64071388 None:intergenic 50.0%
GAAACCGTGAAGGACCTAAG+AGG + chr1_2:64071803-64071822 Msa0084530:CDS 50.0%
AGCACCTCTTAGGTCCTTCA+CGG - chr1_2:64071810-64071829 None:intergenic 50.0%
!! GAGGTGCTGGTTCAGTTATC+CGG + chr1_2:64071822-64071841 Msa0084530:CDS 50.0%
GGTTCTTAATGACGTGCTCG+CGG - chr1_2:64071871-64071890 None:intergenic 50.0%
GCACCTCTTGATGTCCATTG+TGG - chr1_2:64071892-64071911 None:intergenic 50.0%
GTTACACTATTCCATGGCCG+TGG + chr1_2:64072110-64072129 Msa0084530:CDS 50.0%
CTATTCAGTCCCAACCACCT+GGG + chr1_2:64072171-64072190 Msa0084530:CDS 50.0%
TAACCTACCATCACAGACCC+AGG - chr1_2:64072191-64072210 None:intergenic 50.0%
TATCCAGCATCCCACATGAG+AGG + chr1_2:64072328-64072347 Msa0084530:intron 50.0%
GTGTTCCCTGCAATACACCA+TGG - chr1_2:64072720-64072739 None:intergenic 50.0%
CTCTACCATTTCTCCCTGCT+CGG - chr1_2:64072752-64072771 None:intergenic 50.0%
TCCCACCCCGAGATGAAAAT+TGG + chr1_2:64072857-64072876 Msa0084530:CDS 50.0%
! GCCAATTTTCATCTCGGGGT+GGG - chr1_2:64072861-64072880 None:intergenic 50.0%
! GAAACCTTCGTGCTATTCCC+TGG + chr1_2:64073049-64073068 Msa0084530:CDS 50.0%
ATACCCAGGGAATAGCACGA+AGG - chr1_2:64073056-64073075 None:intergenic 50.0%
GGAGTTGGAGCAGGTTTGAA+AGG + chr1_2:64073117-64073136 Msa0084530:CDS 50.0%
TGATGAAGCCCTTGTGTCAG+AGG + chr1_2:64073366-64073385 Msa0084530:intron 50.0%
TTGCCTCTCCTCTGACACAA+GGG - chr1_2:64073377-64073396 None:intergenic 50.0%
TCAGAGGAGAGGCAAGAACT+CGG + chr1_2:64073382-64073401 Msa0084530:intron 50.0%
CAATCCCATGAACCTGTTGC+AGG + chr1_2:64073528-64073547 Msa0084530:CDS 50.0%
TCCACCTGCAACAGGTTCAT+GGG - chr1_2:64073535-64073554 None:intergenic 50.0%
TCAGAATCTCCACCTGCAAC+AGG - chr1_2:64073543-64073562 None:intergenic 50.0%
! TGCAGGTGGAGATTCTGAAG+AGG + chr1_2:64073545-64073564 Msa0084530:CDS 50.0%
ACCGTAAATGGGATTGCTGC+TGG + chr1_2:64073616-64073635 Msa0084530:CDS 50.0%
CCCAGCAGCAATCCCATTTA+CGG - chr1_2:64073620-64073639 None:intergenic 50.0%
CCGTAAATGGGATTGCTGCT+GGG + chr1_2:64073617-64073636 Msa0084530:CDS 50.0%
AAACTCCACCCTGCACAAGC+TGG - chr1_2:64066365-64066384 None:intergenic 55.0%
GGAGTGCAAGTCAGTGGAAG+TGG - chr1_2:64067419-64067438 None:intergenic 55.0%
GCTCTAGCTGGAAGCTGTGT+TGG - chr1_2:64068399-64068418 None:intergenic 55.0%
CTACCTTGTGATCAGGTCCC+GGG - chr1_2:64068747-64068766 None:intergenic 55.0%
!! TGCGGGAGCTTTAAGTGCAC+CGG - chr1_2:64069449-64069468 None:intergenic 55.0%
TTAAAGCTCCCGCACACGCA+GGG + chr1_2:64069455-64069474 Msa0084530:intron 55.0%
! ATAATGGTGGGACCCCTTCC+CGG - chr1_2:64069482-64069501 None:intergenic 55.0%
GGAAGGGGTCCCACCATTAT+TGG + chr1_2:64069482-64069501 Msa0084530:intron 55.0%
GGAGCAGAGGTTCCAAAAGC+TGG - chr1_2:64069797-64069816 None:intergenic 55.0%
!! GATGCACGGCTTGCTGCTAT+TGG + chr1_2:64071324-64071343 Msa0084530:CDS 55.0%
! TTGGGAAGAGCATGTCCTGG+TGG + chr1_2:64071351-64071370 Msa0084530:CDS 55.0%
! GTGAAGGACCTAAGAGGTGC+TGG + chr1_2:64071809-64071828 Msa0084530:CDS 55.0%
GTTCCCAAGCAGCAGTGAAG+CGG - chr1_2:64072037-64072056 None:intergenic 55.0%
ACACTATTCCATGGCCGTGG+AGG + chr1_2:64072113-64072132 Msa0084530:CDS 55.0%
CTCGACCAATACTGCCTCCA+CGG - chr1_2:64072130-64072149 None:intergenic 55.0%
GCTATTCAGTCCCAACCACC+TGG + chr1_2:64072170-64072189 Msa0084530:CDS 55.0%
CATCACAGACCCAGGTGGTT+GGG - chr1_2:64072183-64072202 None:intergenic 55.0%
CAACCTCTCATGTGGGATGC+TGG - chr1_2:64072334-64072353 None:intergenic 55.0%
CAGCATCCCACATGAGAGGT+TGG + chr1_2:64072332-64072351 Msa0084530:intron 55.0%
AACACTTCGGTCTACCGAGC+AGG + chr1_2:64072735-64072754 Msa0084530:CDS 55.0%
ACACTTCGGTCTACCGAGCA+GGG + chr1_2:64072736-64072755 Msa0084530:CDS 55.0%
GTCTACCGAGCAGGGAGAAA+TGG + chr1_2:64072744-64072763 Msa0084530:CDS 55.0%
CGAGCAGGGAGAAATGGTAG+AGG + chr1_2:64072750-64072769 Msa0084530:CDS 55.0%
! TTTTCATCTCGGGGTGGGAG+AGG - chr1_2:64072856-64072875 None:intergenic 55.0%
! CGCCAATTTTCATCTCGGGG+TGG - chr1_2:64072862-64072881 None:intergenic 55.0%
GAGCTCGGCTTCCTGAACAT+AGG + chr1_2:64072988-64073007 Msa0084530:CDS 55.0%
CAGGGCGACTACCTATGTTC+AGG - chr1_2:64073002-64073021 None:intergenic 55.0%
TAGGTAGTCGCCCTGCAAGA+AGG + chr1_2:64073007-64073026 Msa0084530:CDS 55.0%
AAGCCCTTGTGTCAGAGGAG+AGG + chr1_2:64073371-64073390 Msa0084530:intron 55.0%
CTTGCCTCTCCTCTGACACA+AGG - chr1_2:64073378-64073397 None:intergenic 55.0%
TCCCATGAACCTGTTGCAGG+TGG + chr1_2:64073531-64073550 Msa0084530:CDS 55.0%
CTCCACCTGCAACAGGTTCA+TGG - chr1_2:64073536-64073555 None:intergenic 55.0%
ATGGGATTGCTGCTGGGATG+AGG + chr1_2:64073623-64073642 Msa0084530:CDS 55.0%
GCTGCTGGGATGAGGAATAC+CGG + chr1_2:64073631-64073650 Msa0084530:CDS 55.0%
TGTGCAGGGTGGAGTTTCCC+CGG + chr1_2:64066368-64066387 Msa0084530:CDS 60.0%
GGTCCCGGGATGTCTAGTCT+AGG - chr1_2:64068733-64068752 None:intergenic 60.0%
CATCCCGGGACCTGATCACA+AGG + chr1_2:64068741-64068760 Msa0084530:CDS 60.0%
! CCAGCAAGTTGAGGGAGCTG+TGG - chr1_2:64069043-64069062 None:intergenic 60.0%
CCACAGCTCCCTCAACTTGC+TGG + chr1_2:64069040-64069059 Msa0084530:CDS 60.0%
!! GCGGGAGCTTTAAGTGCACC+GGG - chr1_2:64069448-64069467 None:intergenic 60.0%
CTTAAAGCTCCCGCACACGC+AGG + chr1_2:64069454-64069473 Msa0084530:intron 60.0%
! TGGCCGCTTCACTGCTGCTT+GGG + chr1_2:64072031-64072050 Msa0084530:CDS 60.0%
CAATACTGCCTCCACGGCCA+TGG - chr1_2:64072124-64072143 None:intergenic 60.0%
CATGGCCGTGGAGGCAGTAT+TGG + chr1_2:64072122-64072141 Msa0084530:CDS 60.0%
!! CGTGGAGGCAGTATTGGTCG+AGG + chr1_2:64072128-64072147 Msa0084530:CDS 60.0%
!! GGAGGCAGTATTGGTCGAGG+CGG + chr1_2:64072131-64072150 Msa0084530:CDS 60.0%
AGGCGGTGGCCCTACATATC+TGG + chr1_2:64072148-64072167 Msa0084530:CDS 60.0%
CCATCACAGACCCAGGTGGT+TGG - chr1_2:64072184-64072203 None:intergenic 60.0%
CCAACCACCTGGGTCTGTGA+TGG + chr1_2:64072181-64072200 Msa0084530:CDS 60.0%
CCTACCATCACAGACCCAGG+TGG - chr1_2:64072188-64072207 None:intergenic 60.0%
CCACCTGGGTCTGTGATGGT+AGG + chr1_2:64072185-64072204 Msa0084530:intron 60.0%
AGGAAGCCGAGCTCTGCTTC+AGG - chr1_2:64072982-64073001 None:intergenic 60.0%
!! CTTCCAGCTTGGCTCGGAGT+TGG + chr1_2:64073102-64073121 Msa0084530:CDS 60.0%
! GGGTCTGGGGTGCTAGCTGA+TGG + chr1_2:64069920-64069939 Msa0084530:CDS 65.0%
CTGGCCGCTTCACTGCTGCT+TGG + chr1_2:64072030-64072049 Msa0084530:CDS 65.0%
!! GGCAGTATTGGTCGAGGCGG+TGG + chr1_2:64072134-64072153 Msa0084530:CDS 65.0%
GGGTGGGAGAGGTGGACGAA+GGG - chr1_2:64072845-64072864 None:intergenic 65.0%
TCATCTCGGGGTGGGAGAGG+TGG - chr1_2:64072853-64072872 None:intergenic 65.0%
CTGCTTCAGGCGTGGCTTCG+TGG - chr1_2:64072969-64072988 None:intergenic 65.0%
GCCACGCCTGAAGCAGAGCT+CGG + chr1_2:64072973-64072992 Msa0084530:CDS 65.0%
GCTCCAACTCCGAGCCAAGC+TGG - chr1_2:64073108-64073127 None:intergenic 65.0%
!! GCTTGGCTCGGAGTTGGAGC+AGG + chr1_2:64073108-64073127 Msa0084530:CDS 65.0%
TTCCCGGACCCTGCGTGTGC+GGG - chr1_2:64069466-64069485 None:intergenic 70.0%
CTTCCCGGACCCTGCGTGTG+CGG - chr1_2:64069467-64069486 None:intergenic 70.0%
GCACACGCAGGGTCCGGGAA+GGG + chr1_2:64069466-64069485 Msa0084530:intron 70.0%
CACACGCAGGGTCCGGGAAG+GGG + chr1_2:64069467-64069486 Msa0084530:intron 70.0%
GGGGTGGGAGAGGTGGACGA+AGG - chr1_2:64072846-64072865 None:intergenic 70.0%
GCCGAGCTCTGCTTCAGGCG+TGG - chr1_2:64072977-64072996 None:intergenic 70.0%
GCTCCCGCACACGCAGGGTC+CGG + chr1_2:64069460-64069479 Msa0084530:intron 75.0%
CTCCCGCACACGCAGGGTCC+GGG + chr1_2:64069461-64069480 Msa0084530:intron 75.0%
CGCACACGCAGGGTCCGGGA+AGG + chr1_2:64069465-64069484 Msa0084530:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 64065156 64073657 64065156 ID=Msa0084530;Name=Msa0084530
chr1_2 mRNA 64065156 64073657 64065156 ID=Msa0084530-mRNA-1;Parent=Msa0084530;Name=Msa0084530-mRNA-1;_AED=0.12;_eAED=0.12;_QI=201|0.95|0.90|1|1|1|21|0|1012
chr1_2 exon 64065156 64065512 64065156 ID=Msa0084530-mRNA-1:exon:21484;Parent=Msa0084530-mRNA-1
chr1_2 exon 64065766 64065929 64065766 ID=Msa0084530-mRNA-1:exon:21485;Parent=Msa0084530-mRNA-1
chr1_2 exon 64066305 64066419 64066305 ID=Msa0084530-mRNA-1:exon:21486;Parent=Msa0084530-mRNA-1
chr1_2 exon 64066661 64066738 64066661 ID=Msa0084530-mRNA-1:exon:21487;Parent=Msa0084530-mRNA-1
chr1_2 exon 64066849 64066917 64066849 ID=Msa0084530-mRNA-1:exon:21488;Parent=Msa0084530-mRNA-1
chr1_2 exon 64067045 64067123 64067045 ID=Msa0084530-mRNA-1:exon:21489;Parent=Msa0084530-mRNA-1
chr1_2 exon 64067244 64067320 64067244 ID=Msa0084530-mRNA-1:exon:21490;Parent=Msa0084530-mRNA-1
chr1_2 exon 64067404 64067499 64067404 ID=Msa0084530-mRNA-1:exon:21491;Parent=Msa0084530-mRNA-1
chr1_2 exon 64067768 64067906 64067768 ID=Msa0084530-mRNA-1:exon:21492;Parent=Msa0084530-mRNA-1
chr1_2 exon 64068334 64068438 64068334 ID=Msa0084530-mRNA-1:exon:21493;Parent=Msa0084530-mRNA-1
chr1_2 exon 64068710 64068762 64068710 ID=Msa0084530-mRNA-1:exon:21494;Parent=Msa0084530-mRNA-1
chr1_2 exon 64068839 64069105 64068839 ID=Msa0084530-mRNA-1:exon:21495;Parent=Msa0084530-mRNA-1
chr1_2 exon 64069708 64069833 64069708 ID=Msa0084530-mRNA-1:exon:21496;Parent=Msa0084530-mRNA-1
chr1_2 exon 64069911 64070012 64069911 ID=Msa0084530-mRNA-1:exon:21497;Parent=Msa0084530-mRNA-1
chr1_2 exon 64070083 64070229 64070083 ID=Msa0084530-mRNA-1:exon:21498;Parent=Msa0084530-mRNA-1
chr1_2 exon 64071088 64071186 64071088 ID=Msa0084530-mRNA-1:exon:21499;Parent=Msa0084530-mRNA-1
chr1_2 exon 64071288 64071376 64071288 ID=Msa0084530-mRNA-1:exon:21500;Parent=Msa0084530-mRNA-1
chr1_2 exon 64071781 64071907 64071781 ID=Msa0084530-mRNA-1:exon:21501;Parent=Msa0084530-mRNA-1
chr1_2 exon 64071996 64072202 64071996 ID=Msa0084530-mRNA-1:exon:21502;Parent=Msa0084530-mRNA-1
chr1_2 exon 64072733 64073204 64072733 ID=Msa0084530-mRNA-1:exon:21503;Parent=Msa0084530-mRNA-1
chr1_2 exon 64073386 64073657 64073386 ID=Msa0084530-mRNA-1:exon:21504;Parent=Msa0084530-mRNA-1
chr1_2 five_prime_UTR 64065156 64065356 64065156 ID=Msa0084530-mRNA-1:five_prime_utr;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64065357 64065512 64065357 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64065766 64065929 64065766 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64066305 64066419 64066305 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64066661 64066738 64066661 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64066849 64066917 64066849 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64067045 64067123 64067045 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64067244 64067320 64067244 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64067404 64067499 64067404 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64067768 64067906 64067768 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64068334 64068438 64068334 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64068710 64068762 64068710 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64068839 64069105 64068839 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64069708 64069833 64069708 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64069911 64070012 64069911 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64070083 64070229 64070083 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64071088 64071186 64071088 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64071288 64071376 64071288 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64071781 64071907 64071781 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64071996 64072202 64071996 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64072733 64073204 64072733 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
chr1_2 CDS 64073386 64073657 64073386 ID=Msa0084530-mRNA-1:cds;Parent=Msa0084530-mRNA-1
Gene Sequence

>Msa0084530

ATGACAGACACTACAGATGATATTGCTGAAGAAATCTCGTTCCAGAGCTTCGATGATGATTGTAGGTTGCTTGGTAATCTTCTCAACGACATTCTTCACCGTGAAGTTGGTACCACCTTTGTTGACAAACTCGAAAGAATTCGTGTCCTTGCTCAAAGTGCATGTAATATGAGGCAAGCAGGTATAGTGAACATGGCTGAGTTACTTGAGAAGCAGTTAGCTTCAGAGTTGTCAAAGATGTCATTAGAAGAAGCTTTCACTCTTGCTCGTGCTTTCAGTCATTATCTTACTATGATGGGTATAGCCGAAACTCACCATAGGGTTCGTAAAGGAGGGAATATGGCACAAATTTCAAAATCTTGTGATGATGTGTTTAACCAGCTTGTGCAGGGTGGAGTTTCCCCGGATGATCTTTACAACACAGTCTGCAAACAGGAGGTTGAGATTGTTCTTACAGCTCATCCCACACAAATTAATCGACGAACACTGCAATACAAACACATTCGGATTGCTCATCTTTTGGATTATAACGATCGACCTGATCTTAGCCCTGAAGATCGAGAAATGCTAATTGAGGATCTGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAGCTTAGGCGCCAAAAACCCACTCCAGTTGATGAAGCTAGAGCTGGTTTGAATATAGTGGAGCAGTCACTCTGGAAAGCTGTTCCTCATTATTTACGACGTGTCAGCAATGCTTTAAAGAAGCATACTGGAAAGCCACTTCCACTGACTTGCACTCCCATAAAGTTTGGAACTTGGATGGGAGGTGATAGAGATGGAAATCCAAACGTTACCGCAAAGGTCACAAAAGCTGTTTCACTTCTATCTAGATGGATGGCTATTGACCTCTATATTCGGGAAGTGGATAGCCTCAGATTTGAGCTATCTATGAATCGGTGCAGTGATACGTTGTCAAGACTAGCACATGAAATTCTAGAAGAAGCTAAAGACGAGAATCGCCATGAGAGTTGGAATCAGTCCACGAATAGAAGTCAGTCACTTCCAACACAGCTTCCAGCTAGAGCTCATTTACCCTCTTTTGCTGAAAATGGTGAATCGCAGCATCCTAGACTAGACATCCCGGGACCTGATCACAAGGATGGTGGTATTTCTCCAAGTCCAACTACACTCAGAACTGGCAATCCCAGTCTTAAAGTATCAGTAACAAGTTCAGAAAATTCCAATGGTTCTTCATCTTCAATTCCATCTTCTCCCTCTTACAACTCTAGTCAACCGCTTTCTCAGAGGAAATTTACAGAATCCCAGACAGGAAAGTCCAGTTTTCAGAAGCTTTTAGAGCCACAGCTCCCTCAACTTGCTGGAATTGCTCCTTATAGAGTTGTCCTGGGAAATGTAAAGGATAAGCTTGAGAGAAGCCGTAGACGGTTAGAACTTCTTCTTGAGGATGTTGCATGTGACTATGATCCTTTGGATTATTATGAAACAGCTGACCAGCTTTTGGAACCTCTGCTCCTCTGTTATGAATCTCTGCAATCATGTGGGTCTGGGGTGCTAGCTGATGGTCGACTTGCTGATCTCATTCGTAGAGTTGCAACCTTTGGAATGGTTTTAATGAAGCTTGATTTACGCCAGGAATCTGGGAGACATGCTGAAACACTTGATGCAGTTACAACATATTTGGATATGGGTACTTATAGTGAATGGGATGAAGAAAAGAAATTGGACTTCTTAACAAGAGAGCTGAAAGGAAAGAGGCCACTAGTACCTGTTAGTATGGAGGTTCCTGCTGATGTTAAAGAAGTCTTGGATACATTCCGAATCGCTGCTGAACTAGGGAGCGATTTTCTAGGAGCCTATGTGATATCTATGGCCTCGAGTGCAAGTGATGTCCTTGCAGTAGAGCTTTTACAGAAGGATGCACGGCTTGCTGCTATTGGAGAATTGGGAAGAGCATGTCCTGGTGGAACGTTGCGGGTTGTCCCTCTATTTGAAACCGTGAAGGACCTAAGAGGTGCTGGTTCAGTTATCCGGAAACTTTTATCAATAGACTGGTACCGCGAGCACGTCATTAAGAACCACAATGGACATCAAGAGGTTATGGTTGGATATTCTGATTCTGGTAAAGATGCTGGCCGCTTCACTGCTGCTTGGGAACTTTACAAAGCTCAGGAGGATGTTGTAGCTGCTTGCAATGATTATGGTATTAAAGTTACACTATTCCATGGCCGTGGAGGCAGTATTGGTCGAGGCGGTGGCCCTACATATCTGGCTATTCAGTCCCAACCACCTGGGTCTGTGATGGGAACACTTCGGTCTACCGAGCAGGGAGAAATGGTAGAGGCTAAGTTTGGGTTGCCACAGATAGCTGTTAGACAACTTGAAATATACACAACTGCTGTATTACTTGCAACCCTTCGTCCACCTCTCCCACCCCGAGATGAAAATTGGCGTAGTCTCATGGAAGAAATCTCAGATATCAGCTGCAAGTGTTACCGCAATGTAGTCTACGAAAATCCAGAGTTCCTTTCTTACTTCCACGAAGCCACGCCTGAAGCAGAGCTCGGCTTCCTGAACATAGGTAGTCGCCCTGCAAGAAGGAAGAACACAAAGGGAATTGGAAACCTTCGTGCTATTCCCTGGGTATTTGCTTGGACTCAAACCAGATTTGTTCTTCCAGCTTGGCTCGGAGTTGGAGCAGGTTTGAAAGGTGCTTGTGAGAAAGGTCATAGGGAAGAACTAAAAGCAATGTACAAAGAATGGCCTTTCTTTCAAAAGGAGAGGCAAGAACTCGGACGTGAGCTAAGAAACGAGCTCCTGACAGCTGAAAAGTTTGTGCTCGTGATTAGTGGGCACGAGAAACTTCAGCAGAATAATAGGAGCTTGAGGAGGTTGGTTGAGAATAGACTTCCATTTCTCAATCCCATGAACCTGTTGCAGGTGGAGATTCTGAAGAGGTTGAGGCGTGATGACGACAACCTTAAACTCAGAGATGCTTTGCTTATCACCGTAAATGGGATTGCTGCTGGGATGAGGAATACCGGTTAA
Protein sequence

>Msa0084530

MTDTTDDIAEEISFQSFDDDCRLLGNLLNDILHREVGTTFVDKLERIRVLAQSACNMRQAGIVNMAELLEKQLASELSKMSLEEAFTLARAFSHYLTMMGIAETHHRVRKGGNMAQISKSCDDVFNQLVQGGVSPDDLYNTVCKQEVEIVLTAHPTQINRRTLQYKHIRIAHLLDYNDRPDLSPEDREMLIEDLVREITSIWQTDELRRQKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSNALKKHTGKPLPLTCTPIKFGTWMGGDRDGNPNVTAKVTKAVSLLSRWMAIDLYIREVDSLRFELSMNRCSDTLSRLAHEILEEAKDENRHESWNQSTNRSQSLPTQLPARAHLPSFAENGESQHPRLDIPGPDHKDGGISPSPTTLRTGNPSLKVSVTSSENSNGSSSSIPSSPSYNSSQPLSQRKFTESQTGKSSFQKLLEPQLPQLAGIAPYRVVLGNVKDKLERSRRRLELLLEDVACDYDPLDYYETADQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHAETLDAVTTYLDMGTYSEWDEEKKLDFLTRELKGKRPLVPVSMEVPADVKEVLDTFRIAAELGSDFLGAYVISMASSASDVLAVELLQKDARLAAIGELGRACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYREHVIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNDYGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVEAKFGLPQIAVRQLEIYTTAVLLATLRPPLPPRDENWRSLMEEISDISCKCYRNVVYENPEFLSYFHEATPEAELGFLNIGSRPARRKNTKGIGNLRAIPWVFAWTQTRFVLPAWLGVGAGLKGACEKGHREELKAMYKEWPFFQKERQELGRELRNELLTAEKFVLVISGHEKLQQNNRSLRRLVENRLPFLNPMNLLQVEILKRLRRDDDNLKLRDALLITVNGIAAGMRNTG*