AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0088160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0088160 MtrunA17_Chr1g0205221 92.831 544 13 3 1 518 1 544 0.0 989
Msa0088160 MtrunA17_Chr3g0098661 29.472 492 261 10 98 506 6 494 1.24e-54 191
Msa0088160 MtrunA17_Chr1g0150001 31.894 417 234 9 133 512 74 477 5.01e-53 187
Msa0088160 MtrunA17_Chr3g0079271 28.741 421 263 7 119 508 109 523 1.08e-34 137
Msa0088160 MtrunA17_Chr2g0293351 26.056 426 269 7 121 510 33 448 1.98e-31 126
Msa0088160 MtrunA17_Chr1g0150041 25.506 247 142 5 99 342 29 236 4.17e-19 87.8
Msa0088160 MtrunA17_Chr2g0293371 24.796 367 230 7 180 510 2 358 8.49e-17 82.0
Msa0088160 MtrunA17_Chr1g0150031 25.843 178 111 1 362 518 3 180 2.23e-15 74.7
Msa0088160 MtrunA17_Chr2g0293361 25.571 219 137 3 318 510 35 253 6.90e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0088160 AT2G32040.1 69.868 531 122 6 25 518 31 560 0.0 652
Msa0088160 AT2G32040.2 78.788 429 64 3 117 518 1 429 0.0 610
Msa0088160 AT1G79710.2 29.508 427 254 10 114 506 52 465 2.71e-55 193
Msa0088160 AT1G79710.1 29.508 427 254 10 114 506 52 465 2.71e-55 193
Msa0088160 AT5G54860.1 27.957 465 257 6 115 501 20 484 3.20e-52 185
Msa0088160 AT5G25050.1 28.000 475 283 12 85 514 17 477 3.34e-52 185
Msa0088160 AT5G25040.4 28.341 434 252 9 127 518 63 479 2.35e-48 174
Msa0088160 AT5G25040.2 27.753 454 254 11 127 518 63 504 7.23e-46 168
Msa0088160 AT1G79710.3 28.212 358 212 9 114 437 52 398 2.50e-40 150
Msa0088160 AT5G25040.1 27.926 376 218 7 127 466 63 421 2.74e-40 152
Msa0088160 AT5G10820.1 26.697 442 254 11 122 512 69 491 8.29e-37 142
Msa0088160 AT5G25040.5 27.666 347 194 7 212 518 3 332 1.58e-29 119
Msa0088160 AT5G25040.3 26.426 333 192 7 127 423 63 378 1.07e-27 114
Msa0088160 AT1G64890.1 27.110 391 239 6 119 475 27 405 1.35e-27 115
Msa0088160 AT2G33280.1 27.293 447 285 11 105 518 77 516 4.80e-25 108
Msa0088160 AT1G04570.1 26.603 421 272 8 112 503 88 500 1.31e-23 104
Msa0088160 AT2G33280.3 26.764 411 262 10 140 518 5 408 4.44e-20 93.2
Msa0088160 AT1G04570.2 25.463 216 135 3 314 503 137 352 1.28e-12 70.1
Msa0088160 AT2G33280.2 31.343 134 92 0 385 518 201 334 1.94e-12 69.3

Find 173 sgRNAs with CRISPR-Local

Find 849 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGTCAAAAGACTATTAT+TGG 0.146532 1_2:-69203637 None:intergenic
GACTAGGCAGCTGTGATTTC+TGG 0.171486 1_2:+69195991 Msa0088160:intron
CGACGATAGCGACTCATTAT+TGG 0.200510 1_2:+69194705 Msa0088160:CDS
ATCAAAATTCACTTTAAATC+TGG 0.207622 1_2:+69203391 Msa0088160:three_prime_UTR
TGCTGGGGTTCTTCAGCTTT+TGG 0.228174 1_2:+69197049 Msa0088160:CDS
GATCGGCGAGGTGTAGAAAT+TGG 0.232444 1_2:-69194578 None:intergenic
ATCTCTCTCTGTTGCTTTCT+CGG 0.232890 1_2:+69196316 Msa0088160:CDS
ACCTTCTCCGATAACCAAAA+AGG 0.249081 1_2:-69196193 None:intergenic
AGTCCTTACAAAGAAGTAAA+AGG 0.252498 1_2:-69203595 None:intergenic
TAATTATTTAAATTGAATTA+AGG 0.262870 1_2:-69194490 None:intergenic
TTACTGCCTCTACCACTTCT+TGG 0.266430 1_2:+69203101 Msa0088160:CDS
GGTGTAGAAATTGGGAAATT+TGG 0.267603 1_2:-69194569 None:intergenic
TTCTGCCACAAAACATCTTT+TGG 0.270211 1_2:-69194189 None:intergenic
GCAGGCCTGACTCAAGTATT+TGG 0.283071 1_2:+69203017 Msa0088160:CDS
CTTGGTGTTGGACTTTATAA+TGG 0.284228 1_2:+69197640 Msa0088160:CDS
CTGTCTCAATGTTCTTAAAA+TGG 0.285635 1_2:-69203430 None:intergenic
TTATTTAGAGCAGTGCTATT+TGG 0.287303 1_2:-69194383 None:intergenic
ATTAGACTTCATCTCGATTT+CGG 0.303513 1_2:-69203168 None:intergenic
AATATTCTCCACTAATAGTT+TGG 0.304622 1_2:-69194220 None:intergenic
CACTTCTTGGTCTTCTCCCT+GGG 0.305804 1_2:+69203114 Msa0088160:CDS
TACAAAGCTCGTGGATGTTC+TGG 0.305856 1_2:-69203527 None:intergenic
TCTAATGGAGGGAGTGTTCT+TGG 0.307833 1_2:+69202981 Msa0088160:CDS
AACAGATATAGTACATTGTT+TGG 0.312139 1_2:+69195358 Msa0088160:CDS
CTACTTCAGCGGGTCTTTGT+TGG 0.335964 1_2:+69197087 Msa0088160:CDS
CCACTTCTTGGTCTTCTCCC+TGG 0.340018 1_2:+69203113 Msa0088160:CDS
ATCTCTTCAGTCCTTATGCT+GGG 0.350602 1_2:+69197033 Msa0088160:CDS
TGGCTTGTGAAACCTCTATA+TGG 0.351457 1_2:+69196030 Msa0088160:CDS
CTAATGGAGGGAGTGTTCTT+GGG 0.352512 1_2:+69202982 Msa0088160:CDS
GACGATAGCGACTCATTATT+GGG 0.363290 1_2:+69194706 Msa0088160:CDS
GGTGAGTCACAAAGCACTTC+GGG 0.376967 1_2:+69197010 Msa0088160:CDS
CAAGGACAAATTTGATAACT+TGG 0.380656 1_2:+69203046 Msa0088160:CDS
ACAGATATAGTACATTGTTT+GGG 0.381846 1_2:+69195359 Msa0088160:CDS
ACTGGACTAAACCGGAAGTT+TGG 0.383574 1_2:+69197845 Msa0088160:CDS
ACTCTCATGTCTGTATCTAA+TGG 0.383974 1_2:+69202966 Msa0088160:CDS
TCGATTTCGGAATCGTCCTT+TGG 0.387782 1_2:-69203155 None:intergenic
TCAAAATTCACTTTAAATCT+GGG 0.388741 1_2:+69203392 Msa0088160:three_prime_UTR
ATCGCAACAGCAACAGTATC+CGG 0.393229 1_2:-69195394 None:intergenic
CATCGCTTATTCCAAACTTC+CGG 0.395932 1_2:-69197856 None:intergenic
TTTAAAGGATGATTTGCATC+TGG 0.399641 1_2:+69195471 Msa0088160:CDS
CTTCTGTATCATCTAGTGTA+TGG 0.401404 1_2:+69203848 Msa0088160:three_prime_UTR
GTCTGCTTGGTGCACTCTCA+TGG 0.404435 1_2:+69196234 Msa0088160:CDS
TCGTCCTTTGGATTTGCATC+AGG 0.409697 1_2:-69203143 None:intergenic
GGTTGTAGATTCAATGGTTG+TGG 0.412195 1_2:+69196976 Msa0088160:intron
ATACCGGACATTTCAGTTCC+CGG 0.417769 1_2:-69194646 None:intergenic
GATCTCTTCAGTCCTTATGC+TGG 0.418334 1_2:+69197032 Msa0088160:CDS
ACCTCGATTGCATCTCTGCT+TGG 0.422137 1_2:+69197622 Msa0088160:CDS
TTACAAAAGCTTGTATAAAC+AGG 0.426888 1_2:-69203686 None:intergenic
TCATTATTGGGTTCTAGAAC+TGG 0.427066 1_2:+69194718 Msa0088160:CDS
TCACTTTAAATCTGGGTTTG+TGG 0.429136 1_2:+69203399 Msa0088160:three_prime_UTR
AGCGATGAGTGGTTTGCAAT+TGG 0.431214 1_2:+69197872 Msa0088160:CDS
CAAGTTATCAAATTTGTCCT+TGG 0.434615 1_2:-69203045 None:intergenic
CATTTCAGCACAAATTCTCT+TGG 0.437574 1_2:+69197562 Msa0088160:intron
ATTGCATCTCTGCTTGGTGT+TGG 0.442139 1_2:+69197628 Msa0088160:CDS
CTGGTATTTCTGCGTTTCCA+TGG 0.443683 1_2:+69196010 Msa0088160:CDS
GCACCGCTCCAAACTATTAG+TGG 0.444358 1_2:+69194212 Msa0088160:five_prime_UTR
TGATATTAGTTGTTCTCCAC+TGG 0.450158 1_2:+69203191 Msa0088160:exon
CTTGCTGCTAGCACAAGAAC+AGG 0.454091 1_2:-69202906 None:intergenic
GGGTCTTTGTTGGATGCATA+TGG 0.457699 1_2:+69197097 Msa0088160:CDS
GGAAATTTGGAGGGCAATAA+CGG 0.459031 1_2:-69194556 None:intergenic
AGATTCAATGGTTGTGGAAA+GGG 0.459319 1_2:+69196982 Msa0088160:CDS
GAATTGCATTGACTTTGTAA+TGG 0.460159 1_2:-69194252 None:intergenic
TGTTGGATGCATATGGAGTA+AGG 0.460266 1_2:+69197104 Msa0088160:CDS
TATATACATGGTCGTGCAAA+TGG 0.463564 1_2:+69194342 Msa0088160:five_prime_UTR
AGCTGAAGAACCCCAGCATA+AGG 0.464178 1_2:-69197044 None:intergenic
CTCAGGCCTGGCAAATGAAA+AGG 0.475164 1_2:-69197319 None:intergenic
ATCGGCGAGGTGTAGAAATT+GGG 0.476127 1_2:-69194577 None:intergenic
CAGTGCTATACAATATGCTC+TGG 0.481138 1_2:+69203450 Msa0088160:three_prime_UTR
TTTGTGACAGGTGCAGGAAA+AGG 0.484679 1_2:+69195271 Msa0088160:intron
TAATTCCAAATACTTGAGTC+AGG 0.485447 1_2:-69203022 None:intergenic
TACTGGTTACTGGACTAAAC+CGG 0.488334 1_2:+69197837 Msa0088160:CDS
GTAGAAATTGGGAAATTTGG+AGG 0.495587 1_2:-69194566 None:intergenic
ATTAAAATCTATAATCGAGA+TGG 0.501287 1_2:-69203360 None:intergenic
CTCGTTCGCCGCAATACCGC+CGG 0.505966 1_2:+69194605 Msa0088160:CDS
TAAATTAAACAAAAGTGAAA+AGG 0.506643 1_2:-69203563 None:intergenic
TCGCAACAGCAACAGTATCC+GGG 0.512033 1_2:-69195393 None:intergenic
CTATTAGTGGAGAATATTTG+TGG 0.515209 1_2:+69194225 Msa0088160:five_prime_UTR
GACAGATACCTTCTCCTTGG+TGG 0.517160 1_2:-69203501 None:intergenic
TAATGGAGGGAGTGTTCTTG+GGG 0.517980 1_2:+69202983 Msa0088160:CDS
TAGAACAGCTTGGATAAGAA+AGG 0.519813 1_2:-69203229 None:intergenic
ATTTACCTAAAATAGACAAC+AGG 0.519872 1_2:+69203798 Msa0088160:three_prime_UTR
CCTCTTGCTGTACCAAGTGT+AGG 0.520059 1_2:-69197291 None:intergenic
AGTGATACGAAAGAGAGATA+TGG 0.522600 1_2:-69194086 None:intergenic
CAAGCAGACCGGATAAAACT+AGG 0.524590 1_2:-69196220 None:intergenic
AGAAGACCAAGAAGTGGTAG+AGG 0.525079 1_2:-69203107 None:intergenic
ACAGAGTATCATTCAGCTGT+GGG 0.525230 1_2:+69197359 Msa0088160:CDS
AAGATTATGTCCCGAGGGGA+TGG 0.527273 1_2:+69202926 Msa0088160:CDS
CAACAAAGACCCGCTGAAGT+AGG 0.527539 1_2:-69197086 None:intergenic
GTTTGGGATTGATCTATCCC+CGG 0.528718 1_2:+69195375 Msa0088160:CDS
CCACAAGAAAATAAATAATG+TGG 0.530329 1_2:-69197412 None:intergenic
AGGGACAGATACCTTCTCCT+TGG 0.530773 1_2:-69203504 None:intergenic
TTTGCATCAGGATTGTCCCC+AGG 0.535541 1_2:-69203131 None:intergenic
TATAGAGGTTTCACAAGCCA+TGG 0.535812 1_2:-69196027 None:intergenic
GCGATGGTATACTTTGTTCA+AGG 0.536780 1_2:+69195412 Msa0088160:CDS
TTAAGAATGGATACCTCAGC+AGG 0.538127 1_2:-69195496 None:intergenic
AAGCAAAACTTAGAACAGCT+TGG 0.540142 1_2:-69203239 None:intergenic
GAGAACTCATCGGAATCCGC+CGG 0.542775 1_2:+69194627 Msa0088160:CDS
GGCAGTAGCCACCAAGGAGA+AGG 0.542893 1_2:+69203493 Msa0088160:three_prime_UTR
TTGTGAGCTCCTACTTCAGC+GGG 0.546600 1_2:+69197077 Msa0088160:CDS
GCGGATTCCGATGAGTTCTC+CGG 0.546638 1_2:-69194624 None:intergenic
CACCTAATAAAACCATATAG+AGG 0.547156 1_2:-69196042 None:intergenic
ATATTTGTTGTCAACAGAAG+TGG 0.547608 1_2:-69196267 None:intergenic
CGATGCTAAAGTTGCCGCCA+GGG 0.548051 1_2:+69203325 Msa0088160:three_prime_UTR
AGAGTTGCCTCCATCCCCTC+GGG 0.549319 1_2:-69202936 None:intergenic
TGTCGACCTCGGAATGATAC+CGG 0.551706 1_2:-69194662 None:intergenic
ATGTATATATATCACGCCTC+AGG 0.551812 1_2:-69194328 None:intergenic
TAGATTCAATGGTTGTGGAA+AGG 0.551877 1_2:+69196981 Msa0088160:CDS
TGCGGCGAACGAGCGACGAT+CGG 0.555805 1_2:-69194595 None:intergenic
AAGAGTTGCCTCCATCCCCT+CGG 0.556034 1_2:-69202937 None:intergenic
CCGCCGGGAACTGAAATGTC+CGG 0.556427 1_2:+69194643 Msa0088160:CDS
TGGTGAGTCACAAAGCACTT+CGG 0.557058 1_2:+69197009 Msa0088160:CDS
AGAACTCATCGGAATCCGCC+GGG 0.559318 1_2:+69194628 Msa0088160:CDS
CGCTATCGTCGATGTTGAGT+CGG 0.561810 1_2:-69194693 None:intergenic
TTGCATCAGGATTGTCCCCA+GGG 0.566609 1_2:-69203130 None:intergenic
ATACGAAAGAGAGATATGGC+TGG 0.567166 1_2:-69194082 None:intergenic
ACGATGCTAAAGTTGCCGCC+AGG 0.567540 1_2:+69203324 Msa0088160:three_prime_UTR
CTCATGTCTGTATCTAATGG+AGG 0.574248 1_2:+69202969 Msa0088160:CDS
GATTGACAGAAGACAATGCT+AGG 0.577372 1_2:+69203472 Msa0088160:three_prime_UTR
TGCACTCTCATGGAGTCTGA+TGG 0.577488 1_2:+69196244 Msa0088160:CDS
CCTACACTTGGTACAGCAAG+AGG 0.578175 1_2:+69197291 Msa0088160:CDS
CACAAGAAAATAAATAATGT+GGG 0.584571 1_2:-69197411 None:intergenic
AACAGAGTATCATTCAGCTG+TGG 0.586939 1_2:+69197358 Msa0088160:CDS
CAACAAACTTACAAAGCTCG+TGG 0.587004 1_2:-69203536 None:intergenic
GTCGATGTTGAGTCGGAAAG+CGG 0.587421 1_2:-69194686 None:intergenic
TCTCTTCAGTCCTTATGCTG+GGG 0.588582 1_2:+69197034 Msa0088160:CDS
TGAGAGTGCACCAAGCAGAC+CGG 0.590587 1_2:-69196231 None:intergenic
TAGAAATTGGGAAATTTGGA+GGG 0.590749 1_2:-69194565 None:intergenic
GATGGTTTACAACAAGGCCC+TGG 0.594725 1_2:-69203342 None:intergenic
GGAAGCCTCTAGATCTGTCT+CGG 0.595371 1_2:-69195308 None:intergenic
AAAGCTCGTGGATGTTCTGG+AGG 0.602621 1_2:-69203524 None:intergenic
AAGAAAGGCAATCTCAAGGA+AGG 0.603309 1_2:-69203214 None:intergenic
GGATACTGTTGCTGTTGCGA+TGG 0.603826 1_2:+69195396 Msa0088160:CDS
ATTATGTCCCGAGGGGATGG+AGG 0.606500 1_2:+69202929 Msa0088160:CDS
GGATAAGAAAGGCAATCTCA+AGG 0.606521 1_2:-69203218 None:intergenic
TCATGTCTGTATCTAATGGA+GGG 0.612558 1_2:+69202970 Msa0088160:CDS
CGCAACAGCAACAGTATCCG+GGG 0.616699 1_2:-69195392 None:intergenic
GTAAAAGAACAACCTACACT+TGG 0.619642 1_2:+69197279 Msa0088160:CDS
TGAGTTCTCCGGCGGTATTG+CGG 0.621556 1_2:-69194613 None:intergenic
CGGAAAGCGGATGTCGACCT+CGG 0.623787 1_2:-69194673 None:intergenic
AGTTTGGAATAAGCGATGAG+TGG 0.627347 1_2:+69197861 Msa0088160:CDS
AGCAGCAAGATTATGTCCCG+AGG 0.628817 1_2:+69202920 Msa0088160:CDS
CAATCCTGATGCAAATCCAA+AGG 0.634709 1_2:+69203139 Msa0088160:CDS
ATTGTGAGCTCCTACTTCAG+CGG 0.634840 1_2:+69197076 Msa0088160:CDS
CCAGGGAGAAGACCAAGAAG+TGG 0.640736 1_2:-69203113 None:intergenic
AATCGAGATGGTTTACAACA+AGG 0.641661 1_2:-69203348 None:intergenic
CAATGTACACCGTGATGGTG+TGG 0.642688 1_2:+69194140 Msa0088160:five_prime_UTR
TCAAGTATTTGGAATTACCA+AGG 0.643118 1_2:+69203028 Msa0088160:CDS
AATACCGCCGGAGAACTCAT+CGG 0.643407 1_2:+69194617 Msa0088160:CDS
AACTACCGAGACAGATCTAG+AGG 0.643910 1_2:+69195303 Msa0088160:CDS
ACCAAGCAGAGATGCAATCG+AGG 0.646963 1_2:-69197623 None:intergenic
GCAGCAAGATTATGTCCCGA+GGG 0.648094 1_2:+69202921 Msa0088160:CDS
AACATAGCGGAGTCAGAATG+CGG 0.648710 1_2:-69197444 None:intergenic
GCAACGGCAGATGTTAGCAG+TGG 0.657397 1_2:-69197249 None:intergenic
ACTTCTTGGTCTTCTCCCTG+GGG 0.662903 1_2:+69203115 Msa0088160:CDS
CTACACTTGGTACAGCAAGA+GGG 0.666566 1_2:+69197292 Msa0088160:CDS
AATGGAGGGAGTGTTCTTGG+GGG 0.667150 1_2:+69202984 Msa0088160:CDS
ATGCTAGGCAGTAGCCACCA+AGG 0.668555 1_2:+69203487 Msa0088160:three_prime_UTR
GCAATCTCAAGGAAGGCCAG+TGG 0.669941 1_2:-69203207 None:intergenic
ATGTGTTAGAAAACAGCCTG+AGG 0.670249 1_2:+69194312 Msa0088160:five_prime_UTR
TCAACAAAGCCACACCATCA+CGG 0.671425 1_2:-69194149 None:intergenic
AAGCTCGTGGATGTTCTGGA+GGG 0.672881 1_2:-69203523 None:intergenic
TTACCTAAAATAGACAACAC+AGG 0.673146 1_2:+69203716 Msa0088160:three_prime_UTR
AAATGTCCGGTATCATTCCG+AGG 0.674031 1_2:+69194656 Msa0088160:CDS
TTTGCATCTGGATCCTGCTG+AGG 0.674351 1_2:+69195483 Msa0088160:CDS
TGAGGCGTGATATATATACA+TGG 0.674488 1_2:+69194330 Msa0088160:five_prime_UTR
GGTTTACAACAAGGCCCTGG+CGG 0.678697 1_2:-69203339 None:intergenic
ATGGTTGTGGAAAGGGCGCG+TGG 0.678786 1_2:+69196989 Msa0088160:CDS
GCATACAATGTACACCGTGA+TGG 0.695305 1_2:+69194135 Msa0088160:five_prime_UTR
TCTCCACTAATAGTTTGGAG+CGG 0.702881 1_2:-69194215 None:intergenic
CGAACGAGCGACGATCGGCG+AGG 0.716961 1_2:-69194590 None:intergenic
CAGCAAGATTATGTCCCGAG+GGG 0.733719 1_2:+69202922 Msa0088160:CDS
GATTCCGATGAGTTCTCCGG+CGG 0.747973 1_2:-69194621 None:intergenic
GTAATGAGCTAAGATTGCAG+AGG 0.760900 1_2:-69203082 None:intergenic
CCGGACATTTCAGTTCCCGG+CGG 0.777672 1_2:-69194643 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGATGAAAAAATAAATTAA+AGG + chr1_2:69202253-69202272 Msa0088160:intron 10.0%
!! TTATATGAAAACAGTTAAAA+TGG - chr1_2:69194972-69194991 None:intergenic 15.0%
!!! ATTATTTTAATAAACTCTTC+AGG - chr1_2:69195020-69195039 None:intergenic 15.0%
!! AAAAAATCCACTAATAAATA+AGG - chr1_2:69196729-69196748 None:intergenic 15.0%
!! TAATCTGAATCATATATTAA+AGG + chr1_2:69196763-69196782 Msa0088160:intron 15.0%
!! TCTATAGATTAAAATTGTTT+AGG + chr1_2:69196925-69196944 Msa0088160:intron 15.0%
!! CTATAGATTAAAATTGTTTA+GGG + chr1_2:69196926-69196945 Msa0088160:intron 15.0%
!! TATAGATTAAAATTGTTTAG+GGG + chr1_2:69196927-69196946 Msa0088160:intron 15.0%
!! GTAAATAGAAATAATTAGAA+GGG - chr1_2:69197189-69197208 None:intergenic 15.0%
!! TGTAAATAGAAATAATTAGA+AGG - chr1_2:69197190-69197209 None:intergenic 15.0%
!!! AATTATTTCTATTTACACTA+TGG + chr1_2:69197193-69197212 Msa0088160:intron 15.0%
!!! ATTTAACTTTTGTTAAACAA+AGG - chr1_2:69198016-69198035 None:intergenic 15.0%
!! TTAACAAAAGTTAAATAAAG+AGG + chr1_2:69198020-69198039 Msa0088160:intron 15.0%
!!! ATATTAAATTTTGACTTCAT+AGG - chr1_2:69198103-69198122 None:intergenic 15.0%
!! AAAAGTAATATTACTGAAAT+GGG - chr1_2:69201857-69201876 None:intergenic 15.0%
!! AAAAGTAATATTACTGAAAT+GGG - chr1_2:69201857-69201876 None:intergenic 15.0%
!! TCAAATAAGATATCAATAAA+AGG - chr1_2:69202381-69202400 None:intergenic 15.0%
!!! AAGTAAAACCAAATATATTT+TGG - chr1_2:69202597-69202616 None:intergenic 15.0%
!! ATGCAAAAGTAAATTAATAA+GGG + chr1_2:69202673-69202692 Msa0088160:intron 15.0%
!! TAAATTAAACAAAAGTGAAA+AGG - chr1_2:69203566-69203585 None:intergenic 15.0%
!!! TTTTGTTTAATTTAATCTTG+TGG + chr1_2:69203572-69203591 Msa0088160:three_prime_UTR 15.0%
!!! TGTTTTTGTTTTGTATGATA+TGG + chr1_2:69194113-69194132 Msa0088160:five_prime_UTR 20.0%
!! CAATTAAAAAGTTTCAAACA+TGG - chr1_2:69194463-69194482 None:intergenic 20.0%
!! AATAATTTGAAAACAACCTA+TGG + chr1_2:69195034-69195053 Msa0088160:intron 20.0%
!! ATAAGTCCTTATTCTAATAA+TGG + chr1_2:69195129-69195148 Msa0088160:intron 20.0%
!! ATAAAGCCATTATTAGAATA+AGG - chr1_2:69195138-69195157 None:intergenic 20.0%
!! TAATAGAAGTCTAGAAATAA+GGG - chr1_2:69195750-69195769 None:intergenic 20.0%
!! TTAATAGAAGTCTAGAAATA+AGG - chr1_2:69195751-69195770 None:intergenic 20.0%
!!! TTTGAATTACATTATTGACT+AGG + chr1_2:69195975-69195994 Msa0088160:intron 20.0%
!! ATTCAGATTAAGTTAAGAAT+GGG - chr1_2:69196753-69196772 None:intergenic 20.0%
!! CACAAGAAAATAAATAATGT+GGG - chr1_2:69197414-69197433 None:intergenic 20.0%
!! AAAATGCTTGTATTCAATAA+AGG - chr1_2:69197485-69197504 None:intergenic 20.0%
!!! TGTTTCTAATATCTTTATCA+TGG + chr1_2:69197792-69197811 Msa0088160:intron 20.0%
!!! ATGGTTTCATTTTTTTTATC+AGG + chr1_2:69197811-69197830 Msa0088160:intron 20.0%
!!! TTTTTTTTATCAGGTTTTAC+TGG + chr1_2:69197820-69197839 Msa0088160:intron 20.0%
!!! TGATTCAATTGTTATTAACT+AGG + chr1_2:69197987-69198006 Msa0088160:intron 20.0%
!! AAGAATTACTCACAAAAATA+GGG - chr1_2:69198879-69198898 None:intergenic 20.0%
!! TTGCAATTTACAAATTGAAA+AGG - chr1_2:69199367-69199386 None:intergenic 20.0%
!! TATAAAGAGTTTATAAAGAG+TGG + chr1_2:69200591-69200610 Msa0088160:intron 20.0%
!! TATAAAGAGTTTATAAAGAG+TGG + chr1_2:69200591-69200610 Msa0088160:intron 20.0%
!! GAAAAGTAATATTACTGAAA+TGG - chr1_2:69201858-69201877 None:intergenic 20.0%
!! GAAAAGTAATATTACTGAAA+TGG - chr1_2:69201858-69201877 None:intergenic 20.0%
!! CATTCACATATGTTATAAAA+AGG + chr1_2:69202004-69202023 Msa0088160:intron 20.0%
!! ATAGGCTTAATTAAACATTA+TGG - chr1_2:69202297-69202316 None:intergenic 20.0%
!! CTGATTTATTGAACTTTAAT+AGG - chr1_2:69202315-69202334 None:intergenic 20.0%
!! CTATTAAAGTTCAATAAATC+AGG + chr1_2:69202313-69202332 Msa0088160:intron 20.0%
!! AATAAGATATCAATAAAAGG+TGG - chr1_2:69202378-69202397 None:intergenic 20.0%
!! AGATTCCATTGTATAAAAAA+GGG - chr1_2:69202620-69202639 None:intergenic 20.0%
!! AAGATTCCATTGTATAAAAA+AGG - chr1_2:69202621-69202640 None:intergenic 20.0%
!! CATGCAAAAGTAAATTAATA+AGG + chr1_2:69202672-69202691 Msa0088160:intron 20.0%
!! TGCAAAAGTAAATTAATAAG+GGG + chr1_2:69202674-69202693 Msa0088160:intron 20.0%
!! ATTAAAATCTATAATCGAGA+TGG - chr1_2:69203363-69203382 None:intergenic 20.0%
!! ATCAAAATTCACTTTAAATC+TGG + chr1_2:69203391-69203410 Msa0088160:three_prime_UTR 20.0%
!! TCAAAATTCACTTTAAATCT+GGG + chr1_2:69203392-69203411 Msa0088160:three_prime_UTR 20.0%
! AATATTCTCCACTAATAGTT+TGG - chr1_2:69194223-69194242 None:intergenic 25.0%
! ACTTATTTAAGCTTATCTAC+TGG - chr1_2:69195115-69195134 None:intergenic 25.0%
!! GTTAAGTTTTTACTATGTGA+AGG + chr1_2:69195165-69195184 Msa0088160:intron 25.0%
! AACAGATATAGTACATTGTT+TGG + chr1_2:69195358-69195377 Msa0088160:CDS 25.0%
! ACAGATATAGTACATTGTTT+GGG + chr1_2:69195359-69195378 Msa0088160:CDS 25.0%
! ATCAAATGTGAAAACAAATC+AGG + chr1_2:69195776-69195795 Msa0088160:intron 25.0%
!!! GGAAATTCTATCACTTTTTT+AGG - chr1_2:69195905-69195924 None:intergenic 25.0%
!!! AACCTCTATATGGTTTTATT+AGG + chr1_2:69196040-69196059 Msa0088160:CDS 25.0%
!! AGCAATTTATGCATGTATTT+TGG - chr1_2:69196534-69196553 None:intergenic 25.0%
! TATGTGATCTACATCTTAAT+CGG - chr1_2:69196618-69196637 None:intergenic 25.0%
!!! AGATCACATAATTTTTTCGT+TGG + chr1_2:69196628-69196647 Msa0088160:intron 25.0%
!! CAAAAACATTTTTCCTTTCA+GGG + chr1_2:69196682-69196701 Msa0088160:intron 25.0%
!! ACTGTTTCCTTATTTATTAG+TGG + chr1_2:69196719-69196738 Msa0088160:intron 25.0%
! GATTCAGATTAAGTTAAGAA+TGG - chr1_2:69196754-69196773 None:intergenic 25.0%
!!! ATTTTAGGTTGTAGATTCAA+TGG + chr1_2:69196970-69196989 Msa0088160:intron 25.0%
! CCACAAGAAAATAAATAATG+TGG - chr1_2:69197415-69197434 None:intergenic 25.0%
!!! CCACATTATTTATTTTCTTG+TGG + chr1_2:69197412-69197431 Msa0088160:CDS 25.0%
! GTTAATAACAATTGAATCAG+AGG - chr1_2:69197986-69198005 None:intergenic 25.0%
! ATCTTTGAATGTTCCATATT+TGG + chr1_2:69198640-69198659 Msa0088160:intron 25.0%
!! AGATATTTCAACAGGTTTTA+TGG + chr1_2:69198670-69198689 Msa0088160:intron 25.0%
!! GGAATATAAAGCAATTTTAG+TGG + chr1_2:69198712-69198731 Msa0088160:intron 25.0%
! CAAGAATTACTCACAAAAAT+AGG - chr1_2:69198880-69198899 None:intergenic 25.0%
!!! CTATTTTTGTGAGTAATTCT+TGG + chr1_2:69198878-69198897 Msa0088160:intron 25.0%
! GAAGAATGATCCTAAATTAT+TGG + chr1_2:69199340-69199359 Msa0088160:intron 25.0%
! TTGAAAAGGACCAATAATTT+AGG - chr1_2:69199353-69199372 None:intergenic 25.0%
! TAGGCTAATTGATGTAAAAA+TGG + chr1_2:69199677-69199696 Msa0088160:intron 25.0%
! AGGCTAATTGATGTAAAAAT+GGG + chr1_2:69199678-69199697 Msa0088160:intron 25.0%
! TGATAAGAGTTTATAAAGAG+TGG + chr1_2:69200074-69200093 Msa0088160:intron 25.0%
! TGATACTATGTTGAAATTTG+GGG - chr1_2:69200142-69200161 None:intergenic 25.0%
! CTGATACTATGTTGAAATTT+GGG - chr1_2:69200143-69200162 None:intergenic 25.0%
! TCTGATACTATGTTGAAATT+TGG - chr1_2:69200144-69200163 None:intergenic 25.0%
! TGATAAGAGTTTATAAAGAG+TGG + chr1_2:69200074-69200093 Msa0088160:intron 25.0%
! TGATACTATGTTGAAATTTG+AGG - chr1_2:69200142-69200161 None:intergenic 25.0%
! TGATAAGAGTTTATAAAGAG+TGG + chr1_2:69200074-69200093 Msa0088160:intron 25.0%
! TGATACTATGTTGAAATTTG+AGG - chr1_2:69200142-69200161 None:intergenic 25.0%
! TGATAAGAGTTTATAAAGAG+TGG + chr1_2:69200074-69200093 Msa0088160:intron 25.0%
! TGATAAGAGTTTATAAAGAG+TGG + chr1_2:69200074-69200093 Msa0088160:intron 25.0%
! TGATAAGAGTTTATAAAGAG+TGG + chr1_2:69200074-69200093 Msa0088160:intron 25.0%
! TAATATTACTGAAATGGGAA+AGG - chr1_2:69201852-69201871 None:intergenic 25.0%
! CATACTTATTGAGATATAGA+TGG - chr1_2:69201940-69201959 None:intergenic 25.0%
! TAAAAAAACATTGAAGAGGA+TGG - chr1_2:69201981-69202000 None:intergenic 25.0%
! GAGATAAAAAAACATTGAAG+AGG - chr1_2:69201985-69202004 None:intergenic 25.0%
! TAATATTACTGAAATGGGAA+AGG - chr1_2:69201852-69201871 None:intergenic 25.0%
! CATACTTATTGAGATATAGA+TGG - chr1_2:69201940-69201959 None:intergenic 25.0%
! TAAAAAAACATTGAAGAGGA+TGG - chr1_2:69201981-69202000 None:intergenic 25.0%
! GAGATAAAAAAACATTGAAG+AGG - chr1_2:69201985-69202004 None:intergenic 25.0%
! AATTTCTTACAGATTACTAG+AGG - chr1_2:69202457-69202476 None:intergenic 25.0%
! ACTTCATGCCAAAATATATT+TGG + chr1_2:69202586-69202605 Msa0088160:intron 25.0%
!!! TACTTCCCTTTTTTATACAA+TGG + chr1_2:69202612-69202631 Msa0088160:intron 25.0%
! CATTGTCAAAAGACTATTAT+TGG - chr1_2:69203640-69203659 None:intergenic 25.0%
! TTACAAAAGCTTGTATAAAC+AGG - chr1_2:69203689-69203708 None:intergenic 25.0%
! ATTTACCTAAAATAGACAAC+AGG + chr1_2:69203714-69203733 Msa0088160:three_prime_UTR 25.0%
! TATCTCCAAAAGATGTTTTG+TGG + chr1_2:69194184-69194203 Msa0088160:five_prime_UTR 30.0%
CTATTAGTGGAGAATATTTG+TGG + chr1_2:69194225-69194244 Msa0088160:five_prime_UTR 30.0%
!! GAATTGCATTGACTTTGTAA+TGG - chr1_2:69194255-69194274 None:intergenic 30.0%
! TTATTTAGAGCAGTGCTATT+TGG - chr1_2:69194386-69194405 None:intergenic 30.0%
TAGAAATTGGGAAATTTGGA+GGG - chr1_2:69194568-69194587 None:intergenic 30.0%
GTGGAATTTGACAATTTCTT+CGG - chr1_2:69194767-69194786 None:intergenic 30.0%
ATATCTTATGGTGTTTCCAT+AGG - chr1_2:69195053-69195072 None:intergenic 30.0%
GAGCTTATGGAAATATCTTA+TGG - chr1_2:69195065-69195084 None:intergenic 30.0%
TTTACTATGTGAAGGATTAG+CGG + chr1_2:69195173-69195192 Msa0088160:intron 30.0%
!!! CATTGTTTTGATTTTGTGAC+AGG + chr1_2:69195259-69195278 Msa0088160:intron 30.0%
!! TACTTTGTTCAAGGTGTTTT+AGG + chr1_2:69195421-69195440 Msa0088160:CDS 30.0%
!! GGCTGTCAGTTTTTATTTAA+AGG + chr1_2:69195456-69195475 Msa0088160:CDS 30.0%
! TTTAAAGGATGATTTGCATC+TGG + chr1_2:69195471-69195490 Msa0088160:CDS 30.0%
GAAGAGCAAAATTTGCAAAA+TGG - chr1_2:69195572-69195591 None:intergenic 30.0%
CACATTAATTGATTACACCT+CGG - chr1_2:69195603-69195622 None:intergenic 30.0%
!! CTTTGCTTGTGTTTGTTATT+GGG + chr1_2:69195626-69195645 Msa0088160:intron 30.0%
ATCATGCAATATAGAAGACA+AGG - chr1_2:69195703-69195722 None:intergenic 30.0%
TCAGGAACTATAAGTAGATA+AGG + chr1_2:69195794-69195813 Msa0088160:intron 30.0%
CAGGAACTATAAGTAGATAA+GGG + chr1_2:69195795-69195814 Msa0088160:intron 30.0%
! ATTTTATAGTTGACCCTGTT+AGG - chr1_2:69195882-69195901 None:intergenic 30.0%
!!! ACACCACTCCTTTTTATTTT+TGG + chr1_2:69195930-69195949 Msa0088160:intron 30.0%
GATCCAAAAATAAAAAGGAG+TGG - chr1_2:69195936-69195955 None:intergenic 30.0%
GACTCGATCCAAAAATAAAA+AGG - chr1_2:69195941-69195960 None:intergenic 30.0%
CACCTAATAAAACCATATAG+AGG - chr1_2:69196045-69196064 None:intergenic 30.0%
! TAATTAAACTTTTGTCCACG+GGG - chr1_2:69196136-69196155 None:intergenic 30.0%
! GTAATTAAACTTTTGTCCAC+GGG - chr1_2:69196137-69196156 None:intergenic 30.0%
! GGTAATTAAACTTTTGTCCA+CGG - chr1_2:69196138-69196157 None:intergenic 30.0%
!! ATATTTGTTGTCAACAGAAG+TGG - chr1_2:69196270-69196289 None:intergenic 30.0%
! CCTGAAAGGAAAAATGTTTT+TGG - chr1_2:69196684-69196703 None:intergenic 30.0%
! CCAAAAACATTTTTCCTTTC+AGG + chr1_2:69196681-69196700 Msa0088160:intron 30.0%
!! TACATTGTTATTTCCCTGAA+AGG - chr1_2:69196698-69196717 None:intergenic 30.0%
AATTGAACCAACTCAAATGT+TGG - chr1_2:69196840-69196859 None:intergenic 30.0%
!!! GAAGCATTTTATTTTGTCTC+TGG + chr1_2:69196878-69196897 Msa0088160:intron 30.0%
! CAGACACTAAGCTATATTTT+AGG + chr1_2:69196955-69196974 Msa0088160:intron 30.0%
! TTCTTTTACAAGAACAGCAA+CGG - chr1_2:69197268-69197287 None:intergenic 30.0%
TTTGAACTTTCCAAAAACTC+AGG - chr1_2:69197339-69197358 None:intergenic 30.0%
AATGTGGGAAGAAAAATACT+AGG - chr1_2:69197399-69197418 None:intergenic 30.0%
ATACGTAAAGTAGAACATAG+CGG - chr1_2:69197460-69197479 None:intergenic 30.0%
AGTAAATGATGTGTATTGAG+AGG - chr1_2:69197523-69197542 None:intergenic 30.0%
CTTTGCGGAAAATATTTCTT+GGG + chr1_2:69197680-69197699 Msa0088160:intron 30.0%
AAGTATGTTTGTGTGTTAGT+TGG + chr1_2:69197762-69197781 Msa0088160:intron 30.0%
CTCTTTAATGTCAGATATTC+AGG + chr1_2:69198127-69198146 Msa0088160:intron 30.0%
TTTAATGTCAGATATTCAGG+CGG + chr1_2:69198130-69198149 Msa0088160:intron 30.0%
AGTTGTTGGATGAGATAAAA+AGG - chr1_2:69198336-69198355 None:intergenic 30.0%
AAATTAACGAGCCAAACATA+TGG - chr1_2:69198366-69198385 None:intergenic 30.0%
!! AAACCAGTTTGTTAGATTAG+TGG + chr1_2:69198389-69198408 Msa0088160:intron 30.0%
!! AACCAGTTTGTTAGATTAGT+GGG + chr1_2:69198390-69198409 Msa0088160:intron 30.0%
GGTGTTTACTAGAAGAAAAA+CGG + chr1_2:69198416-69198435 Msa0088160:intron 30.0%
GTGTTTACTAGAAGAAAAAC+GGG + chr1_2:69198417-69198436 Msa0088160:intron 30.0%
TGTTTACTAGAAGAAAAACG+GGG + chr1_2:69198418-69198437 Msa0088160:intron 30.0%
! GTCAATTGTTTTCTACGATA+TGG + chr1_2:69198470-69198489 Msa0088160:intron 30.0%
AAGGCAAAAATATTTAGCTG+TGG + chr1_2:69198597-69198616 Msa0088160:intron 30.0%
! GCTTTATATTCCTTTGACTT+TGG - chr1_2:69198704-69198723 None:intergenic 30.0%
AACTGTTTAGTAAAGAGGTT+GGG + chr1_2:69198805-69198824 Msa0088160:intron 30.0%
!! TGACTCTTACAATGGATTTT+GGG - chr1_2:69198852-69198871 None:intergenic 30.0%
! TTTTGTGAGTAATTCTTGGA+AGG + chr1_2:69198882-69198901 Msa0088160:intron 30.0%
CATCTATATAACACTTCAGT+CGG - chr1_2:69198973-69198992 None:intergenic 30.0%
! GCGTGAGATTTAATTGATTT+GGG + chr1_2:69199182-69199201 Msa0088160:intron 30.0%
GAGAAACATGGAATATTGAA+TGG - chr1_2:69199410-69199429 None:intergenic 30.0%
! TGTTGGCTACTAGAAAAATA+AGG + chr1_2:69199525-69199544 Msa0088160:intron 30.0%
GTTGGCTACTAGAAAAATAA+GGG + chr1_2:69199526-69199545 Msa0088160:intron 30.0%
AAGAAGTCAATTACCAACAT+AGG + chr1_2:69199631-69199650 Msa0088160:intron 30.0%
GGCTAATTGATGTAAAAATG+GGG + chr1_2:69199679-69199698 Msa0088160:intron 30.0%
GCTAATTGATGTAAAAATGG+GGG + chr1_2:69199680-69199699 Msa0088160:intron 30.0%
ATACCTGAAGAGACAAAATA+GGG + chr1_2:69199770-69199789 Msa0088160:intron 30.0%
TAGATTAACACCTGTGAATA+CGG - chr1_2:69199852-69199871 None:intergenic 30.0%
!! TTCTAAAGCCTTTCATTTCT+CGG + chr1_2:69201913-69201932 Msa0088160:intron 30.0%
!! TTCTAAAGCCTTTCATTTCT+CGG + chr1_2:69201913-69201932 Msa0088160:intron 30.0%
GGCTTAATTAAACATTATGG+AGG - chr1_2:69202294-69202313 None:intergenic 30.0%
AGATATCAATAAAAGGTGGA+CGG - chr1_2:69202374-69202393 None:intergenic 30.0%
TGCTTATTTGCAAGTATACA+TGG + chr1_2:69202542-69202561 Msa0088160:intron 30.0%
! ATGGTTTTCCATGGATTTTT+AGG + chr1_2:69202561-69202580 Msa0088160:intron 30.0%
! TGGTTTTCCATGGATTTTTA+GGG + chr1_2:69202562-69202581 Msa0088160:intron 30.0%
! ATCTTTCAACTATTTTCCCT+AGG + chr1_2:69202636-69202655 Msa0088160:intron 30.0%
!! GTAGCTTTGATAATTGCAAT+TGG + chr1_2:69202712-69202731 Msa0088160:intron 30.0%
CAGTGAATGATATTATTGCT+TGG - chr1_2:69202782-69202801 None:intergenic 30.0%
! TGCATGAATTACCTTCTTTT+GGG + chr1_2:69202800-69202819 Msa0088160:intron 30.0%
TAATTCCAAATACTTGAGTC+AGG - chr1_2:69203025-69203044 None:intergenic 30.0%
! TCAAGTATTTGGAATTACCA+AGG + chr1_2:69203028-69203047 Msa0088160:CDS 30.0%
CAAGTTATCAAATTTGTCCT+TGG - chr1_2:69203048-69203067 None:intergenic 30.0%
! CAAGGACAAATTTGATAACT+TGG + chr1_2:69203046-69203065 Msa0088160:CDS 30.0%
ATTAGACTTCATCTCGATTT+CGG - chr1_2:69203171-69203190 None:intergenic 30.0%
CTGTCTCAATGTTCTTAAAA+TGG - chr1_2:69203433-69203452 None:intergenic 30.0%
AGTCCTTACAAAGAAGTAAA+AGG - chr1_2:69203598-69203617 None:intergenic 30.0%
TTACCTAAAATAGACAACAC+AGG + chr1_2:69203716-69203735 Msa0088160:three_prime_UTR 30.0%
AGTGATACGAAAGAGAGATA+TGG - chr1_2:69194089-69194108 None:intergenic 35.0%
! TTCTGCCACAAAACATCTTT+TGG - chr1_2:69194192-69194211 None:intergenic 35.0%
ATGTATATATATCACGCCTC+AGG - chr1_2:69194331-69194350 None:intergenic 35.0%
TGAGGCGTGATATATATACA+TGG + chr1_2:69194330-69194349 Msa0088160:five_prime_UTR 35.0%
TATATACATGGTCGTGCAAA+TGG + chr1_2:69194342-69194361 Msa0088160:five_prime_UTR 35.0%
! AGTCATCGTGTCTCTATTTT+TGG - chr1_2:69194417-69194436 None:intergenic 35.0%
GTAGAAATTGGGAAATTTGG+AGG - chr1_2:69194569-69194588 None:intergenic 35.0%
GGTGTAGAAATTGGGAAATT+TGG - chr1_2:69194572-69194591 None:intergenic 35.0%
!! TCATTATTGGGTTCTAGAAC+TGG + chr1_2:69194718-69194737 Msa0088160:CDS 35.0%
GAATTTGACAATTTCTTCGG+AGG - chr1_2:69194764-69194783 None:intergenic 35.0%
!!! ACACCATTGTTTGTTTTAGC+TGG + chr1_2:69195196-69195215 Msa0088160:intron 35.0%
TAGCCAGCTAAAACAAACAA+TGG - chr1_2:69195202-69195221 None:intergenic 35.0%
! AAGCGCATTTTTACTAGTAG+AGG - chr1_2:69195332-69195351 None:intergenic 35.0%
CCAATAACAAACACAAGCAA+AGG - chr1_2:69195628-69195647 None:intergenic 35.0%
!! CCTTTGCTTGTGTTTGTTAT+TGG + chr1_2:69195625-69195644 Msa0088160:intron 35.0%
! TTGTTATTGGGACTTAGTGA+AGG + chr1_2:69195638-69195657 Msa0088160:intron 35.0%
TAAAAAGGAGTGGTGTTTCA+AGG - chr1_2:69195926-69195945 None:intergenic 35.0%
! AATTAAACTTTTGTCCACGG+GGG - chr1_2:69196135-69196154 None:intergenic 35.0%
!!! AGGTCATACCTAGTTTTATC+CGG + chr1_2:69196212-69196231 Msa0088160:CDS 35.0%
ATCCATGGTTAAATGATTCC+AGG - chr1_2:69196388-69196407 None:intergenic 35.0%
CATGTGACAAACATTATCCA+TGG - chr1_2:69196403-69196422 None:intergenic 35.0%
CATGCATAAATTGCTTCTGT+TGG + chr1_2:69196539-69196558 Msa0088160:intron 35.0%
ACACAAACCAACATTTGAGT+TGG + chr1_2:69196830-69196849 Msa0088160:intron 35.0%
TAGATTCAATGGTTGTGGAA+AGG + chr1_2:69196981-69197000 Msa0088160:CDS 35.0%
AGATTCAATGGTTGTGGAAA+GGG + chr1_2:69196982-69197001 Msa0088160:CDS 35.0%
TTCTATTTACACTATGGTCC+AGG + chr1_2:69197199-69197218 Msa0088160:intron 35.0%
GTAAAAGAACAACCTACACT+TGG + chr1_2:69197279-69197298 Msa0088160:CDS 35.0%
CAAGAGAATTTGTGCTGAAA+TGG - chr1_2:69197564-69197583 None:intergenic 35.0%
CATTTCAGCACAAATTCTCT+TGG + chr1_2:69197562-69197581 Msa0088160:intron 35.0%
!! CTTGGTGTTGGACTTTATAA+TGG + chr1_2:69197640-69197659 Msa0088160:CDS 35.0%
! TTCTGAAGAATGTTCCTTTG+CGG + chr1_2:69197665-69197684 Msa0088160:intron 35.0%
! CCAAGAAATATTTTCCGCAA+AGG - chr1_2:69197682-69197701 None:intergenic 35.0%
CCTTTGCGGAAAATATTTCT+TGG + chr1_2:69197679-69197698 Msa0088160:intron 35.0%
!! TATCAGGTTTTACTGGTTAC+TGG + chr1_2:69197827-69197846 Msa0088160:intron 35.0%
!! AATTCTCACTGTTTTGAGTC+AGG + chr1_2:69197904-69197923 Msa0088160:CDS 35.0%
!!! AGACGCTTTTTTCTCTGATT+TGG + chr1_2:69198298-69198317 Msa0088160:intron 35.0%
AACTTCGTAAGCCATATGTT+TGG + chr1_2:69198352-69198371 Msa0088160:intron 35.0%
!! ACCAGTTTGTTAGATTAGTG+GGG + chr1_2:69198391-69198410 Msa0088160:intron 35.0%
TTTCTACGATATGGCTTTCT+CGG + chr1_2:69198479-69198498 Msa0088160:intron 35.0%
! TCTTTTGTGTTGTCAGTCAA+AGG + chr1_2:69198578-69198597 Msa0088160:intron 35.0%
AGATTGCAACAAACCAGTAT+GGG - chr1_2:69198624-69198643 None:intergenic 35.0%
AAGATTGCAACAAACCAGTA+TGG - chr1_2:69198625-69198644 None:intergenic 35.0%
TGAATGTTCCATATTTGGTC+TGG + chr1_2:69198645-69198664 Msa0088160:intron 35.0%
GAATGTTCCATATTTGGTCT+GGG + chr1_2:69198646-69198665 Msa0088160:intron 35.0%
ATATCTTCCCAGACCAAATA+TGG - chr1_2:69198656-69198675 None:intergenic 35.0%
!!! AGTGCAACCAGTTTTTTTGT+TGG + chr1_2:69198752-69198771 Msa0088160:intron 35.0%
GAACTGTTTAGTAAAGAGGT+TGG + chr1_2:69198804-69198823 Msa0088160:intron 35.0%
!! GTGACTCTTACAATGGATTT+TGG - chr1_2:69198853-69198872 None:intergenic 35.0%
AAGGAATAATTTCAGCTGCT+TGG + chr1_2:69198901-69198920 Msa0088160:intron 35.0%
! GAAGTGTTATATAGATGCTC+AGG + chr1_2:69198976-69198995 Msa0088160:intron 35.0%
TTGCAGATAACAAGTGATTG+TGG - chr1_2:69199138-69199157 None:intergenic 35.0%
!! ACAATCACTTGTTATCTGCA+AGG + chr1_2:69199137-69199156 Msa0088160:intron 35.0%
!! CAATCACTTGTTATCTGCAA+GGG + chr1_2:69199138-69199157 Msa0088160:intron 35.0%
!! AATCACTTGTTATCTGCAAG+GGG + chr1_2:69199139-69199158 Msa0088160:intron 35.0%
GGCGTGAGATTTAATTGATT+TGG + chr1_2:69199181-69199200 Msa0088160:intron 35.0%
! AGTGTAATTTAGAGCAACGT+TGG + chr1_2:69199226-69199245 Msa0088160:intron 35.0%
! GGAGAGTTTTCTTGAAATTC+AGG + chr1_2:69199292-69199311 Msa0088160:intron 35.0%
GCCATACTAACAGCATTATA+TGG + chr1_2:69199314-69199333 Msa0088160:intron 35.0%
GCCATATAATGCTGTTAGTA+TGG - chr1_2:69199318-69199337 None:intergenic 35.0%
ATTGAATGGATCGTAGAAGT+TGG - chr1_2:69199396-69199415 None:intergenic 35.0%
! CTCTTTTAAGCTGAGAAACA+TGG - chr1_2:69199422-69199441 None:intergenic 35.0%
GCTACTAGAAAAATAAGGGA+AGG + chr1_2:69199530-69199549 Msa0088160:intron 35.0%
CTACTTAATGAGCGATAAAG+TGG + chr1_2:69199561-69199580 Msa0088160:intron 35.0%
TTAATGAGCGATAAAGTGGT+AGG + chr1_2:69199565-69199584 Msa0088160:intron 35.0%
TTTCAATGAAGCATGTTCCA+AGG - chr1_2:69199597-69199616 None:intergenic 35.0%
GATGTAAAAATGGGGGTTAT+TGG + chr1_2:69199687-69199706 Msa0088160:intron 35.0%
TGGAAGAATTCAAGGTCATA+CGG + chr1_2:69199707-69199726 Msa0088160:intron 35.0%
ATTCAAGGTCATACGGTTAA+TGG + chr1_2:69199714-69199733 Msa0088160:intron 35.0%
TTCAAGGTCATACGGTTAAT+GGG + chr1_2:69199715-69199734 Msa0088160:intron 35.0%
TATGCACCTTCAAAAATCCT+GGG - chr1_2:69199753-69199772 None:intergenic 35.0%
CATACCTGAAGAGACAAAAT+AGG + chr1_2:69199769-69199788 Msa0088160:intron 35.0%
AGAGACAAAATAGGGCAAAA+TGG + chr1_2:69199778-69199797 Msa0088160:intron 35.0%
GAGACAAAATAGGGCAAAAT+GGG + chr1_2:69199779-69199798 Msa0088160:intron 35.0%
AGACAAAATAGGGCAAAATG+GGG + chr1_2:69199780-69199799 Msa0088160:intron 35.0%
ATTCACAGGTGTTAATCTAG+TGG + chr1_2:69199853-69199872 Msa0088160:intron 35.0%
TTCACAGGTGTTAATCTAGT+GGG + chr1_2:69199854-69199873 Msa0088160:intron 35.0%
ATGATCAGTGTGAATGTTGT+TGG + chr1_2:69199887-69199906 Msa0088160:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG - chr1_2:69200118-69200137 None:intergenic 35.0%
TAGTCCCTCATTGTTTAGAT+AGG + chr1_2:69200301-69200320 Msa0088160:intron 35.0%
GCATCCTATCTAAACAATGA+GGG - chr1_2:69200308-69200327 None:intergenic 35.0%
AGCATCCTATCTAAACAATG+AGG - chr1_2:69200309-69200328 None:intergenic 35.0%
TAGTCCCTCATTGTTTAGAT+AGG + chr1_2:69200301-69200320 Msa0088160:intron 35.0%
GCATCCTATCTAAACAATGA+GGG - chr1_2:69200308-69200327 None:intergenic 35.0%
AGCATCCTATCTAAACAATG+AGG - chr1_2:69200309-69200328 None:intergenic 35.0%
GATAGGATGCTTGTTTAGAT+AGG + chr1_2:69200354-69200373 Msa0088160:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG - chr1_2:69200118-69200137 None:intergenic 35.0%
TAGTCCCTCATTGTTTAGAT+AGG + chr1_2:69200301-69200320 Msa0088160:intron 35.0%
GCATCCTATCTAAACAATGA+GGG - chr1_2:69200308-69200327 None:intergenic 35.0%
AGCATCCTATCTAAACAATG+AGG - chr1_2:69200309-69200328 None:intergenic 35.0%
GATAGGATGCTTGTTTAGAT+AGG + chr1_2:69200354-69200373 Msa0088160:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG - chr1_2:69200118-69200137 None:intergenic 35.0%
TAGTCCCACATTGTTTAGAT+AGG + chr1_2:69201299-69201318 Msa0088160:intron 35.0%
GCATCCTATCTAAACAATGT+GGG - chr1_2:69201306-69201325 None:intergenic 35.0%
AGCATCCTATCTAAACAATG+TGG - chr1_2:69200309-69200328 None:intergenic 35.0%
GATAGGATGCTTGTTTAGAT+AGG + chr1_2:69200354-69200373 Msa0088160:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG - chr1_2:69200118-69200137 None:intergenic 35.0%
TCGAGAACTGTTGAAATGTA+GGG - chr1_2:69201799-69201818 None:intergenic 35.0%
ATCGAGAACTGTTGAAATGT+AGG - chr1_2:69201800-69201819 None:intergenic 35.0%
! TTTTCTTTCCTATCTCTCTC+TGG + chr1_2:69201873-69201892 Msa0088160:intron 35.0%
!! AAATGAAAGGCTTTAGAAGG+TGG - chr1_2:69201911-69201930 None:intergenic 35.0%
!! GAGAAATGAAAGGCTTTAGA+AGG - chr1_2:69201914-69201933 None:intergenic 35.0%
ACATTGAAGAGGATGGATAA+TGG - chr1_2:69201974-69201993 None:intergenic 35.0%
! TTTTCTTTCCTATCTCTCTC+TGG + chr1_2:69201873-69201892 Msa0088160:intron 35.0%
!! AAATGAAAGGCTTTAGAAGG+TGG - chr1_2:69201911-69201930 None:intergenic 35.0%
!! GAGAAATGAAAGGCTTTAGA+AGG - chr1_2:69201914-69201933 None:intergenic 35.0%
ACATTGAAGAGGATGGATAA+TGG - chr1_2:69201974-69201993 None:intergenic 35.0%
TCACAACCTAAGACTTCAAT+AGG - chr1_2:69202344-69202363 None:intergenic 35.0%
GATATCAATAAAAGGTGGAC+GGG - chr1_2:69202373-69202392 None:intergenic 35.0%
! AGTTTTTGCAACTCAGATAG+TGG + chr1_2:69202431-69202450 Msa0088160:intron 35.0%
! CAAGTATACATGGTTTTCCA+TGG + chr1_2:69202552-69202571 Msa0088160:intron 35.0%
! TGAAGTACCCTAAAAATCCA+TGG - chr1_2:69202572-69202591 None:intergenic 35.0%
ATGTGAAAATGAGCATCCTA+GGG - chr1_2:69202655-69202674 None:intergenic 35.0%
! CTGCATGAATTACCTTCTTT+TGG + chr1_2:69202799-69202818 Msa0088160:intron 35.0%
! GCATGAATTACCTTCTTTTG+GGG + chr1_2:69202801-69202820 Msa0088160:intron 35.0%
TGAATTAAAGCCCCAAAAGA+AGG - chr1_2:69202814-69202833 None:intergenic 35.0%
TCTGAATGCTAGTGTATTTC+AGG + chr1_2:69202872-69202891 Msa0088160:intron 35.0%
ACTCTCATGTCTGTATCTAA+TGG + chr1_2:69202966-69202985 Msa0088160:CDS 35.0%
TCATGTCTGTATCTAATGGA+GGG + chr1_2:69202970-69202989 Msa0088160:CDS 35.0%
TGATATTAGTTGTTCTCCAC+TGG + chr1_2:69203191-69203210 Msa0088160:exon 35.0%
TAGAACAGCTTGGATAAGAA+AGG - chr1_2:69203232-69203251 None:intergenic 35.0%
AAGCAAAACTTAGAACAGCT+TGG - chr1_2:69203242-69203261 None:intergenic 35.0%
AATCGAGATGGTTTACAACA+AGG - chr1_2:69203351-69203370 None:intergenic 35.0%
TCACTTTAAATCTGGGTTTG+TGG + chr1_2:69203399-69203418 Msa0088160:three_prime_UTR 35.0%
! TGGCCTTTTACTTCTTTGTA+AGG + chr1_2:69203592-69203611 Msa0088160:three_prime_UTR 35.0%
! TAGCCTGTGTTGTCTATTTT+AGG - chr1_2:69203722-69203741 None:intergenic 35.0%
! TGTAGCCTGTTGTCTATTTT+AGG - chr1_2:69203806-69203825 None:intergenic 35.0%
CTTCTGTATCATCTAGTGTA+TGG + chr1_2:69203848-69203867 Msa0088160:three_prime_UTR 35.0%
ATACGAAAGAGAGATATGGC+TGG - chr1_2:69194085-69194104 None:intergenic 40.0%
TCTCCACTAATAGTTTGGAG+CGG - chr1_2:69194218-69194237 None:intergenic 40.0%
ATGTGTTAGAAAACAGCCTG+AGG + chr1_2:69194312-69194331 Msa0088160:five_prime_UTR 40.0%
GGAAATTTGGAGGGCAATAA+CGG - chr1_2:69194559-69194578 None:intergenic 40.0%
GACGATAGCGACTCATTATT+GGG + chr1_2:69194706-69194725 Msa0088160:CDS 40.0%
AGACTGTTTAGCAGAGCTTA+TGG - chr1_2:69195078-69195097 None:intergenic 40.0%
TTATCTACTGGCATAAGCAC+CGG - chr1_2:69195103-69195122 None:intergenic 40.0%
!! TTTGATTTTGTGACAGGTGC+AGG + chr1_2:69195265-69195284 Msa0088160:intron 40.0%
GCGATGGTATACTTTGTTCA+AGG + chr1_2:69195412-69195431 Msa0088160:CDS 40.0%
!!! AAGGTGTTTTAGGACTAGCA+AGG + chr1_2:69195431-69195450 Msa0088160:CDS 40.0%
!!! TGTTTTAGGACTAGCAAGGT+TGG + chr1_2:69195435-69195454 Msa0088160:CDS 40.0%
TTAAGAATGGATACCTCAGC+AGG - chr1_2:69195499-69195518 None:intergenic 40.0%
GTATCCATTCTTAAGACTCG+TGG + chr1_2:69195505-69195524 Msa0088160:intron 40.0%
ACAACCACGAGTCTTAAGAA+TGG - chr1_2:69195512-69195531 None:intergenic 40.0%
TTGCTCTTCTATATGATCCG+AGG + chr1_2:69195583-69195602 Msa0088160:intron 40.0%
TGCCTCTCATATATCCTAAC+AGG + chr1_2:69195865-69195884 Msa0088160:intron 40.0%
GCCTCTCATATATCCTAACA+GGG + chr1_2:69195866-69195885 Msa0088160:intron 40.0%
ACCCTGTTAGGATATATGAG+AGG - chr1_2:69195870-69195889 None:intergenic 40.0%
TATAGAGGTTTCACAAGCCA+TGG - chr1_2:69196030-69196049 None:intergenic 40.0%
! TGGCTTGTGAAACCTCTATA+TGG + chr1_2:69196030-69196049 Msa0088160:CDS 40.0%
TATAATGAACAGCCTGTACG+AGG - chr1_2:69196096-69196115 None:intergenic 40.0%
GCATGTCAAAACAACAGCTT+CGG - chr1_2:69196159-69196178 None:intergenic 40.0%
!!! CTATCCCCCTTTTTGGTTAT+CGG + chr1_2:69196186-69196205 Msa0088160:CDS 40.0%
TTCTCCGATAACCAAAAAGG+GGG - chr1_2:69196193-69196212 None:intergenic 40.0%
CTTCTCCGATAACCAAAAAG+GGG - chr1_2:69196194-69196213 None:intergenic 40.0%
CCTTCTCCGATAACCAAAAA+GGG - chr1_2:69196195-69196214 None:intergenic 40.0%
ACCTTCTCCGATAACCAAAA+AGG - chr1_2:69196196-69196215 None:intergenic 40.0%
!!! GCTGCTTTTTGCATACTTCT+TGG + chr1_2:69196293-69196312 Msa0088160:CDS 40.0%
!! ATCTCTCTCTGTTGCTTTCT+CGG + chr1_2:69196316-69196335 Msa0088160:CDS 40.0%
!! CACACATACTGTTTTTCTCC+TGG + chr1_2:69196367-69196386 Msa0088160:intron 40.0%
CTCCTGGAATCATTTAACCA+TGG + chr1_2:69196383-69196402 Msa0088160:intron 40.0%
CTAGTTCAGTAACCTCACAT+AGG - chr1_2:69196455-69196474 None:intergenic 40.0%
GGTTGTAGATTCAATGGTTG+TGG + chr1_2:69196976-69196995 Msa0088160:intron 40.0%
ATCTCTTCAGTCCTTATGCT+GGG + chr1_2:69197033-69197052 Msa0088160:CDS 40.0%
TGTTGGATGCATATGGAGTA+AGG + chr1_2:69197104-69197123 Msa0088160:CDS 40.0%
! TGCATATGGAGTAAGGTACT+AGG + chr1_2:69197111-69197130 Msa0088160:intron 40.0%
! GCATATGGAGTAAGGTACTA+GGG + chr1_2:69197112-69197131 Msa0088160:intron 40.0%
!! CTATGGTCCAGGTTTGTTTT+TGG + chr1_2:69197210-69197229 Msa0088160:intron 40.0%
TGTGACACCAAAAACAAACC+TGG - chr1_2:69197220-69197239 None:intergenic 40.0%
! AACAGAGTATCATTCAGCTG+TGG + chr1_2:69197358-69197377 Msa0088160:CDS 40.0%
! ACAGAGTATCATTCAGCTGT+GGG + chr1_2:69197359-69197378 Msa0088160:CDS 40.0%
TTGACACGTCCTAAAAACTC+GGG - chr1_2:69197595-69197614 None:intergenic 40.0%
CTTGACACGTCCTAAAAACT+CGG - chr1_2:69197596-69197615 None:intergenic 40.0%
TTTCTTGGGACTACCATCTT+AGG + chr1_2:69197694-69197713 Msa0088160:intron 40.0%
GTTTGTGTGTTAGTTGGAGA+AGG + chr1_2:69197768-69197787 Msa0088160:intron 40.0%
! TACTGGTTACTGGACTAAAC+CGG + chr1_2:69197837-69197856 Msa0088160:CDS 40.0%
CATCGCTTATTCCAAACTTC+CGG - chr1_2:69197859-69197878 None:intergenic 40.0%
! AGTTTGGAATAAGCGATGAG+TGG + chr1_2:69197861-69197880 Msa0088160:CDS 40.0%
CATATGGCTTACGAAGTTGT+TGG - chr1_2:69198350-69198369 None:intergenic 40.0%
TCCCCACTAATCTAACAAAC+TGG - chr1_2:69198395-69198414 None:intergenic 40.0%
! GTTTGTTAGATTAGTGGGGA+AGG + chr1_2:69198395-69198414 Msa0088160:intron 40.0%
TACTAGAAGAAAAACGGGGA+AGG + chr1_2:69198422-69198441 Msa0088160:intron 40.0%
TATCCTTAGCAGTTCAGCAT+TGG + chr1_2:69198547-69198566 Msa0088160:intron 40.0%
GTCTGGGAAGATATTTCAAC+AGG + chr1_2:69198662-69198681 Msa0088160:intron 40.0%
!! CAATTTTAGTGGTGACCGTA+GGG + chr1_2:69198723-69198742 Msa0088160:intron 40.0%
CGGTGTTCCAACAAAAAAAC+TGG - chr1_2:69198762-69198781 None:intergenic 40.0%
! CCACTAAGTTGGCTGTATAA+CGG - chr1_2:69198782-69198801 None:intergenic 40.0%
TTATACAGCCAACTTAGTGG+CGG + chr1_2:69198782-69198801 Msa0088160:intron 40.0%
AGGGTTTGTGACTCTTACAA+TGG - chr1_2:69198860-69198879 None:intergenic 40.0%
GCATATCATCCCAAATCTGA+TGG + chr1_2:69198946-69198965 Msa0088160:intron 40.0%
AGATGCTCAGGATTTACTTC+AGG + chr1_2:69198988-69199007 Msa0088160:intron 40.0%
TCAAACTGTGTCATACCAAC+AGG - chr1_2:69199095-69199114 None:intergenic 40.0%
TGTTGGTATGACACAGTTTG+AGG + chr1_2:69199094-69199113 Msa0088160:intron 40.0%
! AGTGATTGTGGTGATTTGCA+TGG - chr1_2:69199126-69199145 None:intergenic 40.0%
TCAGCTTAAAAGAGCAGTGT+GGG + chr1_2:69199428-69199447 Msa0088160:intron 40.0%
TAATTGCAGCTCAACAGGAT+AGG - chr1_2:69199456-69199475 None:intergenic 40.0%
CTAGTAGCCAACATAAACTC+AGG - chr1_2:69199518-69199537 None:intergenic 40.0%
! TGAAGCATGTTCCAAGGTTT+TGG - chr1_2:69199591-69199610 None:intergenic 40.0%
TCAATTACCAACATAGGCTG+TGG + chr1_2:69199637-69199656 Msa0088160:intron 40.0%
GGGGTTATTGGAAGAATTCA+AGG + chr1_2:69199699-69199718 Msa0088160:intron 40.0%
! CAAATGCCCAGGATTTTTGA+AGG + chr1_2:69199744-69199763 Msa0088160:intron 40.0%
GTATGCACCTTCAAAAATCC+TGG - chr1_2:69199754-69199773 None:intergenic 40.0%
! TTGCCCTATTTTGTCTCTTC+AGG - chr1_2:69199776-69199795 None:intergenic 40.0%
AAAATAGGGCAAAATGGGGA+AGG + chr1_2:69199784-69199803 Msa0088160:intron 40.0%
TCACAGGTGTTAATCTAGTG+GGG + chr1_2:69199855-69199874 Msa0088160:intron 40.0%
CAAGAACTTAAGACTCCACA+GGG - chr1_2:69199922-69199941 None:intergenic 40.0%
ACAAGAACTTAAGACTCCAC+AGG - chr1_2:69199923-69199942 None:intergenic 40.0%
GTGGAGTCTTAAGTTCTTGT+TGG + chr1_2:69199923-69199942 Msa0088160:intron 40.0%
AAGCCAAGACAAAGGCAATT+GGG - chr1_2:69200007-69200026 None:intergenic 40.0%
TCAAAGACAAGCCAAGACAA+AGG - chr1_2:69200015-69200034 None:intergenic 40.0%
!! TTTGTCTTGGCTTGTCTTTG+AGG + chr1_2:69200014-69200033 Msa0088160:intron 40.0%
!! TTGTCTTGGCTTGTCTTTGA+GGG + chr1_2:69200015-69200034 Msa0088160:intron 40.0%
!! CCTTACAAAACCGGTTTGTA+AGG - chr1_2:69200109-69200128 None:intergenic 40.0%
!! CCTTACAAACCGGTTTTGTA+AGG + chr1_2:69200106-69200125 Msa0088160:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + chr1_2:69200116-69200135 Msa0088160:intron 40.0%
GTCACTCATCCTTACAAAAC+CGG - chr1_2:69200426-69200445 None:intergenic 40.0%
!! TTGTGTTGGCTTGTCTTTGA+GGG + chr1_2:69200560-69200579 Msa0088160:intron 40.0%
!! CCTTACAAAACCGGTTTGTA+AGG - chr1_2:69200109-69200128 None:intergenic 40.0%
!! CCTTACAAACCGGTTTTGTA+AGG + chr1_2:69200106-69200125 Msa0088160:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + chr1_2:69200116-69200135 Msa0088160:intron 40.0%
GTCACTCATCCTTACAAAAC+CGG - chr1_2:69200426-69200445 None:intergenic 40.0%
!! TTGTGTTGGCTTGTCTTTGA+GGG + chr1_2:69200560-69200579 Msa0088160:intron 40.0%
!! CCTTACAAAACCGGTTTGTA+AGG - chr1_2:69200109-69200128 None:intergenic 40.0%
!! CCTTACAAACCGGTTTTGTA+AGG + chr1_2:69200106-69200125 Msa0088160:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + chr1_2:69200116-69200135 Msa0088160:intron 40.0%
GTCACTCATCCTTACAAAAC+CGG - chr1_2:69200426-69200445 None:intergenic 40.0%
GGGCAAATTGCAATTAAGGT+GGG - chr1_2:69201493-69201512 None:intergenic 40.0%
!! TTGTGTTGGCTTGTCTTTGA+GGG + chr1_2:69200560-69200579 Msa0088160:intron 40.0%
! TTGTCCCACATTGGTTAGAT+AGG + chr1_2:69201553-69201572 Msa0088160:intron 40.0%
CCTTACAAAACCGGATTGTA+AGG - chr1_2:69201616-69201635 None:intergenic 40.0%
!! CCTTACAATCCGGTTTTGTA+AGG + chr1_2:69201613-69201632 Msa0088160:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + chr1_2:69200116-69200135 Msa0088160:intron 40.0%
!! TTGTGTTGGCTTGTCTTTGA+GGG + chr1_2:69200560-69200579 Msa0088160:intron 40.0%
CCTTACAAAACCAGCTTGTA+AGG - chr1_2:69201759-69201778 None:intergenic 40.0%
!!! CCTTACAAGCTGGTTTTGTA+AGG + chr1_2:69201756-69201775 Msa0088160:intron 40.0%
!! TTCCTATCTCTCTCTGGTTT+TGG + chr1_2:69201879-69201898 Msa0088160:intron 40.0%
TAGATGGACCGAGAAATGAA+AGG - chr1_2:69201924-69201943 None:intergenic 40.0%
!! TTCCTATCTCTCTCTGGTTT+TGG + chr1_2:69201879-69201898 Msa0088160:intron 40.0%
TAGATGGACCGAGAAATGAA+AGG - chr1_2:69201924-69201943 None:intergenic 40.0%
GATCAGCCTATTGAAGTCTT+AGG + chr1_2:69202335-69202354 Msa0088160:intron 40.0%
!! GAAAGCTTCTCGTTTTTCTG+TGG - chr1_2:69202513-69202532 None:intergenic 40.0%
CATGTGAAAATGAGCATCCT+AGG - chr1_2:69202656-69202675 None:intergenic 40.0%
CTCATGTCTGTATCTAATGG+AGG + chr1_2:69202969-69202988 Msa0088160:CDS 40.0%
GTAATGAGCTAAGATTGCAG+AGG - chr1_2:69203085-69203104 None:intergenic 40.0%
CAATCCTGATGCAAATCCAA+AGG + chr1_2:69203139-69203158 Msa0088160:CDS 40.0%
AAGAAAGGCAATCTCAAGGA+AGG - chr1_2:69203217-69203236 None:intergenic 40.0%
GGATAAGAAAGGCAATCTCA+AGG - chr1_2:69203221-69203240 None:intergenic 40.0%
CAGTGCTATACAATATGCTC+TGG + chr1_2:69203450-69203469 Msa0088160:three_prime_UTR 40.0%
GATTGACAGAAGACAATGCT+AGG + chr1_2:69203472-69203491 Msa0088160:three_prime_UTR 40.0%
CAACAAACTTACAAAGCTCG+TGG - chr1_2:69203539-69203558 None:intergenic 40.0%
GCATACAATGTACACCGTGA+TGG + chr1_2:69194135-69194154 Msa0088160:five_prime_UTR 45.0%
TCAACAAAGCCACACCATCA+CGG - chr1_2:69194152-69194171 None:intergenic 45.0%
ATCGGCGAGGTGTAGAAATT+GGG - chr1_2:69194580-69194599 None:intergenic 45.0%
ATACCGGACATTTCAGTTCC+CGG - chr1_2:69194649-69194668 None:intergenic 45.0%
AAATGTCCGGTATCATTCCG+AGG + chr1_2:69194656-69194675 Msa0088160:CDS 45.0%
CGACGATAGCGACTCATTAT+TGG + chr1_2:69194705-69194724 Msa0088160:CDS 45.0%
AAGAAACGCGATGAAAGACG+TGG - chr1_2:69194786-69194805 None:intergenic 45.0%
TTTGTGACAGGTGCAGGAAA+AGG + chr1_2:69195271-69195290 Msa0088160:intron 45.0%
AACTACCGAGACAGATCTAG+AGG + chr1_2:69195303-69195322 Msa0088160:CDS 45.0%
! GTTTGGGATTGATCTATCCC+CGG + chr1_2:69195375-69195394 Msa0088160:CDS 45.0%
ATCGCAACAGCAACAGTATC+CGG - chr1_2:69195397-69195416 None:intergenic 45.0%
! CTGGTATTTCTGCGTTTCCA+TGG + chr1_2:69196010-69196029 Msa0088160:CDS 45.0%
! AGTGACTCTATCCCCCTTTT+TGG + chr1_2:69196179-69196198 Msa0088160:intron 45.0%
!!! CCCTTTTTGGTTATCGGAGA+AGG + chr1_2:69196192-69196211 Msa0088160:CDS 45.0%
CAAGCAGACCGGATAAAACT+AGG - chr1_2:69196223-69196242 None:intergenic 45.0%
!!! CTAGTTTTATCCGGTCTGCT+TGG + chr1_2:69196221-69196240 Msa0088160:CDS 45.0%
AGTAACCTCACATAGGTGGT+AGG - chr1_2:69196448-69196467 None:intergenic 45.0%
GTTCAGTAACCTCACATAGG+TGG - chr1_2:69196452-69196471 None:intergenic 45.0%
AGGAGAAGACAAAGCTGTAG+AGG - chr1_2:69196790-69196809 None:intergenic 45.0%
! CTGTGTCTGAAGCACAAAGA+AGG - chr1_2:69196810-69196829 None:intergenic 45.0%
! TGGTGAGTCACAAAGCACTT+CGG + chr1_2:69197009-69197028 Msa0088160:CDS 45.0%
GATCTCTTCAGTCCTTATGC+TGG + chr1_2:69197032-69197051 Msa0088160:CDS 45.0%
TCTCTTCAGTCCTTATGCTG+GGG + chr1_2:69197034-69197053 Msa0088160:CDS 45.0%
ATTGTGAGCTCCTACTTCAG+CGG + chr1_2:69197076-69197095 Msa0088160:CDS 45.0%
GGGTCTTTGTTGGATGCATA+TGG + chr1_2:69197097-69197116 Msa0088160:CDS 45.0%
CTACACTTGGTACAGCAAGA+GGG + chr1_2:69197292-69197311 Msa0088160:CDS 45.0%
! GGCAAACCTTTTCATTTGCC+AGG + chr1_2:69197313-69197332 Msa0088160:CDS 45.0%
! ATTTGCCAGGCCTGAGTTTT+TGG + chr1_2:69197326-69197345 Msa0088160:CDS 45.0%
ACTTTCCAAAAACTCAGGCC+TGG - chr1_2:69197334-69197353 None:intergenic 45.0%
! AACATAGCGGAGTCAGAATG+CGG - chr1_2:69197447-69197466 None:intergenic 45.0%
TGATGTGTATTGAGAGGACG+TGG - chr1_2:69197517-69197536 None:intergenic 45.0%
! GGTTTTACCCCCGAGTTTTT+AGG + chr1_2:69197583-69197602 Msa0088160:CDS 45.0%
TGACACGTCCTAAAAACTCG+GGG - chr1_2:69197594-69197613 None:intergenic 45.0%
!! ATTGCATCTCTGCTTGGTGT+TGG + chr1_2:69197628-69197647 Msa0088160:CDS 45.0%
ACCATCTTAGGTTCTGCTCT+TGG + chr1_2:69197706-69197725 Msa0088160:intron 45.0%
CCATCTTAGGTTCTGCTCTT+GGG + chr1_2:69197707-69197726 Msa0088160:intron 45.0%
ACTGGACTAAACCGGAAGTT+TGG + chr1_2:69197845-69197864 Msa0088160:CDS 45.0%
! AGCGATGAGTGGTTTGCAAT+TGG + chr1_2:69197872-69197891 Msa0088160:CDS 45.0%
AAGAAAAACGGGGAAGGCTA+GGG + chr1_2:69198428-69198447 Msa0088160:intron 45.0%
GCTAGGGTAACTAGCTGAAT+TGG + chr1_2:69198444-69198463 Msa0088160:intron 45.0%
ATTTAGCTGTGGTCCCATAC+TGG + chr1_2:69198608-69198627 Msa0088160:intron 45.0%
!! GCAATTTTAGTGGTGACCGT+AGG + chr1_2:69198722-69198741 Msa0088160:intron 45.0%
CCGTTATACAGCCAACTTAG+TGG + chr1_2:69198779-69198798 Msa0088160:intron 45.0%
AAACAGTTCCGCCACTAAGT+TGG - chr1_2:69198793-69198812 None:intergenic 45.0%
GGCGGAACTGTTTAGTAAAG+AGG + chr1_2:69198800-69198819 Msa0088160:intron 45.0%
TAGTAAAGAGGTTGGGACTC+TGG + chr1_2:69198812-69198831 Msa0088160:intron 45.0%
TAATTTCAGCTGCTTGGCAC+AGG + chr1_2:69198907-69198926 Msa0088160:intron 45.0%
TCAGTCGGTCCATCAGATTT+GGG - chr1_2:69198958-69198977 None:intergenic 45.0%
TTCAGTCGGTCCATCAGATT+TGG - chr1_2:69198959-69198978 None:intergenic 45.0%
! TACTTCAGGTGTTTTGCGTC+AGG + chr1_2:69199002-69199021 Msa0088160:intron 45.0%
TGTCATACCAACAGGCATGT+GGG - chr1_2:69199087-69199106 None:intergenic 45.0%
TGGTATGACACAGTTTGAGG+TGG + chr1_2:69199097-69199116 Msa0088160:intron 45.0%
CTCAGCTTAAAAGAGCAGTG+TGG + chr1_2:69199427-69199446 Msa0088160:intron 45.0%
CAGCTTAAAAGAGCAGTGTG+GGG + chr1_2:69199429-69199448 Msa0088160:intron 45.0%
TCTGGTAATTGCAGCTCAAC+AGG - chr1_2:69199461-69199480 None:intergenic 45.0%
TGTTGAGCTGCAATTACCAG+AGG + chr1_2:69199460-69199479 Msa0088160:intron 45.0%
GTTGAGCTGCAATTACCAGA+GGG + chr1_2:69199461-69199480 Msa0088160:intron 45.0%
ATTACCAGAGGGAATGGAAG+TGG + chr1_2:69199472-69199491 Msa0088160:intron 45.0%
GGCTGATCCTGAGTTTATGT+TGG + chr1_2:69199508-69199527 Msa0088160:intron 45.0%
AAAGTGGTAGGCCAAAACCT+TGG + chr1_2:69199577-69199596 Msa0088160:intron 45.0%
AGAACAACCACAGCCTATGT+TGG - chr1_2:69199647-69199666 None:intergenic 45.0%
AACATAGGCTGTGGTTGTTC+TGG + chr1_2:69199646-69199665 Msa0088160:intron 45.0%
ACATAGGCTGTGGTTGTTCT+GGG + chr1_2:69199647-69199666 Msa0088160:intron 45.0%
GCTAGGATAGCTTAATGACC+TGG + chr1_2:69199806-69199825 Msa0088160:intron 45.0%
ACGCTGAAAACCGTATTCAC+AGG + chr1_2:69199839-69199858 Msa0088160:intron 45.0%
AACTTAAGACTCCACAGGGA+AGG - chr1_2:69199918-69199937 None:intergenic 45.0%
AGCCAAGACAAAGGCAATTG+GGG - chr1_2:69200006-69200025 None:intergenic 45.0%
CAAGCCAAGACAAAGGCAAT+TGG - chr1_2:69200008-69200027 None:intergenic 45.0%
!! TGTCTTGGCTTGTCTTTGAG+GGG + chr1_2:69200016-69200035 Msa0088160:intron 45.0%
! GGTTGGATTTTGTCCCACAT+CGG + chr1_2:69200037-69200056 Msa0088160:intron 45.0%
!! CAAAACCGGTTTGTAAGGTG+AGG - chr1_2:69200104-69200123 None:intergenic 45.0%
CGAGGGGCAAATCACAATTA+AGG - chr1_2:69200255-69200274 None:intergenic 45.0%
! AATTGTGATTTGCCCCTCGT+TGG + chr1_2:69200256-69200275 Msa0088160:intron 45.0%
TTCAAAGACAAGCCAACGAG+GGG - chr1_2:69200271-69200290 None:intergenic 45.0%
CTTCAAAGACAAGCCAACGA+GGG - chr1_2:69200272-69200291 None:intergenic 45.0%
!! CTCGTTGGCTTGTCTTTGAA+GGG + chr1_2:69200271-69200290 Msa0088160:intron 45.0%
!! TCGTTGGCTTGTCTTTGAAG+GGG + chr1_2:69200272-69200291 Msa0088160:intron 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG - chr1_2:69200417-69200436 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG + chr1_2:69200414-69200433 Msa0088160:intron 45.0%
GGGCAAATCGCAATTAAGGT+GGG - chr1_2:69200531-69200550 None:intergenic 45.0%
AAGCCAACACAAGACAACGA+GGG - chr1_2:69200552-69200571 None:intergenic 45.0%
!! CTTGTGTTGGCTTGTCTTTG+AGG + chr1_2:69200559-69200578 Msa0088160:intron 45.0%
!! TGTGTTGGCTTGTCTTTGAG+GGG + chr1_2:69200561-69200580 Msa0088160:intron 45.0%
!! CAAAACCGGTTTGTAAGGTG+AGG - chr1_2:69200104-69200123 None:intergenic 45.0%
CGAGGGGCAAATCACAATTA+AGG - chr1_2:69200255-69200274 None:intergenic 45.0%
! AATTGTGATTTGCCCCTCGT+TGG + chr1_2:69200256-69200275 Msa0088160:intron 45.0%
TTCAAAGACAAGCCAACGAG+GGG - chr1_2:69200271-69200290 None:intergenic 45.0%
CTTCAAAGACAAGCCAACGA+GGG - chr1_2:69200272-69200291 None:intergenic 45.0%
!! CTCGTTGGCTTGTCTTTGAA+GGG + chr1_2:69200271-69200290 Msa0088160:intron 45.0%
!! TCGTTGGCTTGTCTTTGAAG+GGG + chr1_2:69200272-69200291 Msa0088160:intron 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG - chr1_2:69200417-69200436 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG + chr1_2:69200414-69200433 Msa0088160:intron 45.0%
GGGCAAATCGCAATTAAGGT+GGG - chr1_2:69200531-69200550 None:intergenic 45.0%
AAGCCAACACAAGACAACGA+GGG - chr1_2:69200552-69200571 None:intergenic 45.0%
!! CTTGTGTTGGCTTGTCTTTG+AGG + chr1_2:69200559-69200578 Msa0088160:intron 45.0%
!! TGTGTTGGCTTGTCTTTGAG+GGG + chr1_2:69200561-69200580 Msa0088160:intron 45.0%
!! CAAAACCGGTTTGTAAGGTG+AGG - chr1_2:69200104-69200123 None:intergenic 45.0%
CGAGGGGCAAATCACAATTA+AGG - chr1_2:69200255-69200274 None:intergenic 45.0%
! AATTGTGATTTGCCCCTCGT+TGG + chr1_2:69200256-69200275 Msa0088160:intron 45.0%
TTCAAAGACAAGCCAACGAG+GGG - chr1_2:69200271-69200290 None:intergenic 45.0%
CTTCAAAGACAAGCCAACGA+GGG - chr1_2:69200272-69200291 None:intergenic 45.0%
!! CTCGTTGGCTTGTCTTTGAA+GGG + chr1_2:69200271-69200290 Msa0088160:intron 45.0%
!! TCGTTGGCTTGTCTTTGAAG+GGG + chr1_2:69200272-69200291 Msa0088160:intron 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG - chr1_2:69200417-69200436 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG + chr1_2:69200414-69200433 Msa0088160:intron 45.0%
GGGGCAAATTGCAATTAAGG+TGG - chr1_2:69201494-69201513 None:intergenic 45.0%
CGAGGGGCAAATTGCAATTA+AGG - chr1_2:69201497-69201516 None:intergenic 45.0%
AAGCCAACACAAGACAACGA+GGG - chr1_2:69200552-69200571 None:intergenic 45.0%
!! CTTGTGTTGGCTTGTCTTTG+AGG + chr1_2:69200559-69200578 Msa0088160:intron 45.0%
!! TGTGTTGGCTTGTCTTTGAG+GGG + chr1_2:69200561-69200580 Msa0088160:intron 45.0%
GCGTCCTATCTAACCAATGT+GGG - chr1_2:69201560-69201579 None:intergenic 45.0%
AGCGTCCTATCTAACCAATG+TGG - chr1_2:69201561-69201580 None:intergenic 45.0%
CAAAACCGGATTGTAAGGTG+AGG - chr1_2:69201611-69201630 None:intergenic 45.0%
GTAAGGATGAGTTAGGCAGT+AGG + chr1_2:69201630-69201649 Msa0088160:intron 45.0%
AAGCCAACACAAGGCAACTA+GGG - chr1_2:69201657-69201676 None:intergenic 45.0%
CTCAAAGACAAGCCAACACA+AGG - chr1_2:69200561-69200580 None:intergenic 45.0%
!! CTTGTGTTGGCTTGTCTTTG+AGG + chr1_2:69200559-69200578 Msa0088160:intron 45.0%
!! TGTGTTGGCTTGTCTTTGAG+GGG + chr1_2:69200561-69200580 Msa0088160:intron 45.0%
! TAGTCCCACATCGGTTAGAT+AGG + chr1_2:69201696-69201715 Msa0088160:intron 45.0%
CAAAACCAGCTTGTAAGGTG+AGG - chr1_2:69201754-69201773 None:intergenic 45.0%
GTAAGGACGAGTTAGACGTT+AGG + chr1_2:69201773-69201792 Msa0088160:intron 45.0%
GACCAAAACCAGAGAGAGAT+AGG - chr1_2:69201884-69201903 None:intergenic 45.0%
!! TGAAAGGCTTTAGAAGGTGG+TGG - chr1_2:69201908-69201927 None:intergenic 45.0%
GACCAAAACCAGAGAGAGAT+AGG - chr1_2:69201884-69201903 None:intergenic 45.0%
!! TGAAAGGCTTTAGAAGGTGG+TGG - chr1_2:69201908-69201927 None:intergenic 45.0%
!! TCTAATGGAGGGAGTGTTCT+TGG + chr1_2:69202981-69203000 Msa0088160:CDS 45.0%
!! CTAATGGAGGGAGTGTTCTT+GGG + chr1_2:69202982-69203001 Msa0088160:CDS 45.0%
!! TAATGGAGGGAGTGTTCTTG+GGG + chr1_2:69202983-69203002 Msa0088160:CDS 45.0%
AGTGTTCTTGGGGGATTGAT+AGG + chr1_2:69202993-69203012 Msa0088160:CDS 45.0%
TTACTGCCTCTACCACTTCT+TGG + chr1_2:69203101-69203120 Msa0088160:CDS 45.0%
AGAAGACCAAGAAGTGGTAG+AGG - chr1_2:69203110-69203129 None:intergenic 45.0%
TCGTCCTTTGGATTTGCATC+AGG - chr1_2:69203146-69203165 None:intergenic 45.0%
TCGATTTCGGAATCGTCCTT+TGG - chr1_2:69203158-69203177 None:intergenic 45.0%
TACAAAGCTCGTGGATGTTC+TGG - chr1_2:69203530-69203549 None:intergenic 45.0%
!! TAATTATTTAAATTGAATTA+AGG - chr1_2:69194493-69194512 None:intergenic 5.0%
! CAATGTACACCGTGATGGTG+TGG + chr1_2:69194140-69194159 Msa0088160:five_prime_UTR 50.0%
GCACCGCTCCAAACTATTAG+TGG + chr1_2:69194212-69194231 Msa0088160:five_prime_UTR 50.0%
GATCGGCGAGGTGTAGAAAT+TGG - chr1_2:69194581-69194600 None:intergenic 50.0%
AATACCGCCGGAGAACTCAT+CGG + chr1_2:69194617-69194636 Msa0088160:CDS 50.0%
TGTCGACCTCGGAATGATAC+CGG - chr1_2:69194665-69194684 None:intergenic 50.0%
GTCGATGTTGAGTCGGAAAG+CGG - chr1_2:69194689-69194708 None:intergenic 50.0%
CGCTATCGTCGATGTTGAGT+CGG - chr1_2:69194696-69194715 None:intergenic 50.0%
GCTCTGCTAAACAGTCTCAC+CGG + chr1_2:69195081-69195100 Msa0088160:intron 50.0%
GGAAGCCTCTAGATCTGTCT+CGG - chr1_2:69195311-69195330 None:intergenic 50.0%
TCGCAACAGCAACAGTATCC+GGG - chr1_2:69195396-69195415 None:intergenic 50.0%
! GGATACTGTTGCTGTTGCGA+TGG + chr1_2:69195396-69195415 Msa0088160:CDS 50.0%
TTTGCATCTGGATCCTGCTG+AGG + chr1_2:69195483-69195502 Msa0088160:CDS 50.0%
GACTAGGCAGCTGTGATTTC+TGG + chr1_2:69195991-69196010 Msa0088160:intron 50.0%
! CTTTTCGCTCTTCCTCGTAC+AGG + chr1_2:69196081-69196100 Msa0088160:intron 50.0%
CCACGGGGGAGATATAAGAT+GGG - chr1_2:69196121-69196140 None:intergenic 50.0%
TCCACGGGGGAGATATAAGA+TGG - chr1_2:69196122-69196141 None:intergenic 50.0%
TGCACTCTCATGGAGTCTGA+TGG + chr1_2:69196244-69196263 Msa0088160:CDS 50.0%
! TAGGTGTGAGTTGGCATGCT+CGG - chr1_2:69196429-69196448 None:intergenic 50.0%
CATAGGTGGTAGGTGTGAGT+TGG - chr1_2:69196438-69196457 None:intergenic 50.0%
TCACACCTACCACCTATGTG+AGG + chr1_2:69196440-69196459 Msa0088160:intron 50.0%
! GGTGAGTCACAAAGCACTTC+GGG + chr1_2:69197010-69197029 Msa0088160:CDS 50.0%
AGCTGAAGAACCCCAGCATA+AGG - chr1_2:69197047-69197066 None:intergenic 50.0%
! TGCTGGGGTTCTTCAGCTTT+TGG + chr1_2:69197049-69197068 Msa0088160:CDS 50.0%
! TGGGGTTCTTCAGCTTTTGG+TGG + chr1_2:69197052-69197071 Msa0088160:CDS 50.0%
TTGTGAGCTCCTACTTCAGC+GGG + chr1_2:69197077-69197096 Msa0088160:CDS 50.0%
CAACAAAGACCCGCTGAAGT+AGG - chr1_2:69197089-69197108 None:intergenic 50.0%
CTACTTCAGCGGGTCTTTGT+TGG + chr1_2:69197087-69197106 Msa0088160:CDS 50.0%
! CCTCTTGCTGTACCAAGTGT+AGG - chr1_2:69197294-69197313 None:intergenic 50.0%
CCTACACTTGGTACAGCAAG+AGG + chr1_2:69197291-69197310 Msa0088160:CDS 50.0%
CTCAGGCCTGGCAAATGAAA+AGG - chr1_2:69197322-69197341 None:intergenic 50.0%
GACACGTCCTAAAAACTCGG+GGG - chr1_2:69197593-69197612 None:intergenic 50.0%
ACCTCGATTGCATCTCTGCT+TGG + chr1_2:69197622-69197641 Msa0088160:CDS 50.0%
ACCAAGCAGAGATGCAATCG+AGG - chr1_2:69197626-69197645 None:intergenic 50.0%
CCCAAGAGCAGAACCTAAGA+TGG - chr1_2:69197710-69197729 None:intergenic 50.0%
TTCTGCTCTTGGGATGACTC+AGG + chr1_2:69197717-69197736 Msa0088160:intron 50.0%
GAAGAAAAACGGGGAAGGCT+AGG + chr1_2:69198427-69198446 Msa0088160:intron 50.0%
GGGTAACTAGCTGAATTGGC+AGG + chr1_2:69198448-69198467 Msa0088160:intron 50.0%
! CCTTAGCAGTTCAGCATTGG+CGG + chr1_2:69198550-69198569 Msa0088160:intron 50.0%
GGCTGTCATGCCAAAGTCAA+AGG + chr1_2:69198691-69198710 Msa0088160:intron 50.0%
TAAAGAGGTTGGGACTCTGG+AGG + chr1_2:69198815-69198834 Msa0088160:intron 50.0%
AACCAACAAGCTGGTCGATG+TGG + chr1_2:69199027-69199046 Msa0088160:intron 50.0%
CTGGTCGATGTGGCTTGATT+AGG + chr1_2:69199037-69199056 Msa0088160:intron 50.0%
TCGATGTGGCTTGATTAGGC+TGG + chr1_2:69199041-69199060 Msa0088160:intron 50.0%
GGCTTGATTAGGCTGGACTA+TGG + chr1_2:69199048-69199067 Msa0088160:intron 50.0%
GTGTCATACCAACAGGCATG+TGG - chr1_2:69199088-69199107 None:intergenic 50.0%
TCTGCAAGGGGAAATTCGAG+TGG + chr1_2:69199151-69199170 Msa0088160:intron 50.0%
GGAAATTCGAGTGGAAGCAG+CGG + chr1_2:69199160-69199179 Msa0088160:intron 50.0%
GCTGCAATTACCAGAGGGAA+TGG + chr1_2:69199466-69199485 Msa0088160:intron 50.0%
GGAAGTGGAGAGCAATGATG+AGG + chr1_2:69199487-69199506 Msa0088160:intron 50.0%
! GGTTGTTCTGGGCAGATGTT+AGG + chr1_2:69199658-69199677 Msa0088160:intron 50.0%
ATGGGTGAGATCAAATGCCC+AGG + chr1_2:69199733-69199752 Msa0088160:intron 50.0%
!! TTCAGCGTAACTGACTTGCC+AGG - chr1_2:69199827-69199846 None:intergenic 50.0%
CAGGTGTTAATCTAGTGGGG+AGG + chr1_2:69199858-69199877 Msa0088160:intron 50.0%
TGTTGGCAATTCCTTCCCTG+TGG + chr1_2:69199904-69199923 Msa0088160:intron 50.0%
TTGGGGGCAGATCGCAATTA+AGG - chr1_2:69199989-69200008 None:intergenic 50.0%
GCCAAGACAAAGGCAATTGG+GGG - chr1_2:69200005-69200024 None:intergenic 50.0%
!! TTGGCTTGTCTTTGAGGGGT+TGG + chr1_2:69200020-69200039 Msa0088160:intron 50.0%
! TTGTCCCACATCGGCTAGAT+AGG + chr1_2:69200046-69200065 Msa0088160:intron 50.0%
GAGTCCTATCTAGCCGATGT+GGG - chr1_2:69200053-69200072 None:intergenic 50.0%
AGAGTCCTATCTAGCCGATG+TGG - chr1_2:69200054-69200073 None:intergenic 50.0%
GCACTCCTCACCTTACAAAC+CGG + chr1_2:69200096-69200115 Msa0088160:intron 50.0%
AGCCTATCCAAGATCTACCG+TGG + chr1_2:69200163-69200182 Msa0088160:intron 50.0%
GCCTATCCAAGATCTACCGT+GGG + chr1_2:69200164-69200183 Msa0088160:intron 50.0%
CCTATCCAAGATCTACCGTG+GGG + chr1_2:69200165-69200184 Msa0088160:intron 50.0%
CCTTCAAAGACAAGCCAACG+AGG - chr1_2:69200273-69200292 None:intergenic 50.0%
!! CCTCGTTGGCTTGTCTTTGA+AGG + chr1_2:69200270-69200289 Msa0088160:intron 50.0%
!! TTGGCTTGTCTTTGAAGGGG+TGG + chr1_2:69200275-69200294 Msa0088160:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG - chr1_2:69200412-69200431 None:intergenic 50.0%
ACACTCCTCATCTCTACCGT+GGG + chr1_2:69200444-69200463 Msa0088160:intron 50.0%
GGGGCAAATCGCAATTAAGG+TGG - chr1_2:69200532-69200551 None:intergenic 50.0%
CGAGGGGCAAATCGCAATTA+AGG - chr1_2:69200535-69200554 None:intergenic 50.0%
AGCCAACACAAGACAACGAG+GGG - chr1_2:69200551-69200570 None:intergenic 50.0%
CAAGCCAACACAAGACAACG+AGG - chr1_2:69200553-69200572 None:intergenic 50.0%
!! GTGTTGGCTTGTCTTTGAGG+GGG + chr1_2:69200562-69200581 Msa0088160:intron 50.0%
GCACTCCTCACCTTACAAAC+CGG + chr1_2:69200096-69200115 Msa0088160:intron 50.0%
AGCCTATCCAAGATCTACCG+TGG + chr1_2:69200163-69200182 Msa0088160:intron 50.0%
GCCTATCCAAGATCTACCGT+GGG + chr1_2:69200164-69200183 Msa0088160:intron 50.0%
CCTATCCAAGATCTACCGTG+GGG + chr1_2:69200165-69200184 Msa0088160:intron 50.0%
CCTTCAAAGACAAGCCAACG+AGG - chr1_2:69200273-69200292 None:intergenic 50.0%
!! CCTCGTTGGCTTGTCTTTGA+AGG + chr1_2:69200270-69200289 Msa0088160:intron 50.0%
!! TTGGCTTGTCTTTGAAGGGG+TGG + chr1_2:69200275-69200294 Msa0088160:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG - chr1_2:69200412-69200431 None:intergenic 50.0%
ACACTCCTCATCTCTACCGT+GGG + chr1_2:69200444-69200463 Msa0088160:intron 50.0%
GGGGCAAATCGCAATTAAGG+TGG - chr1_2:69200532-69200551 None:intergenic 50.0%
CGAGGGGCAAATCGCAATTA+AGG - chr1_2:69200535-69200554 None:intergenic 50.0%
AGCCAACACAAGACAACGAG+GGG - chr1_2:69200551-69200570 None:intergenic 50.0%
CAAGCCAACACAAGACAACG+AGG - chr1_2:69200553-69200572 None:intergenic 50.0%
!! GTGTTGGCTTGTCTTTGAGG+GGG + chr1_2:69200562-69200581 Msa0088160:intron 50.0%
GCACTCCTCACCTTACAAAC+CGG + chr1_2:69200096-69200115 Msa0088160:intron 50.0%
AGCCTATCCAAGATCTACCG+TGG + chr1_2:69200163-69200182 Msa0088160:intron 50.0%
GCCTATCCAAGATCTACCGT+GGG + chr1_2:69200164-69200183 Msa0088160:intron 50.0%
CCTATCCAAGATCTACCGTG+GGG + chr1_2:69200165-69200184 Msa0088160:intron 50.0%
CCTTCAAAGACAAGCCAACG+AGG - chr1_2:69200273-69200292 None:intergenic 50.0%
!! CCTCGTTGGCTTGTCTTTGA+AGG + chr1_2:69200270-69200289 Msa0088160:intron 50.0%
!! TTGGCTTGTCTTTGAAGGGG+TGG + chr1_2:69200275-69200294 Msa0088160:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG - chr1_2:69200412-69200431 None:intergenic 50.0%
ACACTCCTCATCTCTACCGT+GGG + chr1_2:69200444-69200463 Msa0088160:intron 50.0%
AGCCAACACAAGACAACGAG+GGG - chr1_2:69200551-69200570 None:intergenic 50.0%
CAAGCCAACACAAGACAACG+AGG - chr1_2:69200553-69200572 None:intergenic 50.0%
!! GTGTTGGCTTGTCTTTGAGG+GGG + chr1_2:69200562-69200581 Msa0088160:intron 50.0%
!! GGGTGGATTTTGTCCCACAT+TGG + chr1_2:69201544-69201563 Msa0088160:intron 50.0%
GCACTCCTCACCTTACAATC+CGG + chr1_2:69201603-69201622 Msa0088160:intron 50.0%
AGCCAACACAAGGCAACTAG+GGG - chr1_2:69201656-69201675 None:intergenic 50.0%
CAAGCCAACACAAGGCAACT+AGG - chr1_2:69201658-69201677 None:intergenic 50.0%
!! GTGTTGGCTTGTCTTTGAGG+GGG + chr1_2:69200562-69200581 Msa0088160:intron 50.0%
GGGTAGGTTTAGTCCCACAT+CGG + chr1_2:69201687-69201706 Msa0088160:intron 50.0%
GCGTCCTATCTAACCGATGT+GGG - chr1_2:69201703-69201722 None:intergenic 50.0%
AGCGTCCTATCTAACCGATG+TGG - chr1_2:69201704-69201723 None:intergenic 50.0%
CTTGCTGCTAGCACAAGAAC+AGG - chr1_2:69202909-69202928 None:intergenic 50.0%
AGCAGCAAGATTATGTCCCG+AGG + chr1_2:69202920-69202939 Msa0088160:CDS 50.0%
GCAGCAAGATTATGTCCCGA+GGG + chr1_2:69202921-69202940 Msa0088160:CDS 50.0%
CAGCAAGATTATGTCCCGAG+GGG + chr1_2:69202922-69202941 Msa0088160:CDS 50.0%
AAGATTATGTCCCGAGGGGA+TGG + chr1_2:69202926-69202945 Msa0088160:CDS 50.0%
!! AATGGAGGGAGTGTTCTTGG+GGG + chr1_2:69202984-69203003 Msa0088160:CDS 50.0%
GCAGGCCTGACTCAAGTATT+TGG + chr1_2:69203017-69203036 Msa0088160:CDS 50.0%
! CACTTCTTGGTCTTCTCCCT+GGG + chr1_2:69203114-69203133 Msa0088160:CDS 50.0%
! ACTTCTTGGTCTTCTCCCTG+GGG + chr1_2:69203115-69203134 Msa0088160:CDS 50.0%
TTGCATCAGGATTGTCCCCA+GGG - chr1_2:69203133-69203152 None:intergenic 50.0%
TTTGCATCAGGATTGTCCCC+AGG - chr1_2:69203134-69203153 None:intergenic 50.0%
GATGGTTTACAACAAGGCCC+TGG - chr1_2:69203345-69203364 None:intergenic 50.0%
GACAGATACCTTCTCCTTGG+TGG - chr1_2:69203504-69203523 None:intergenic 50.0%
AGGGACAGATACCTTCTCCT+TGG - chr1_2:69203507-69203526 None:intergenic 50.0%
! AAGCTCGTGGATGTTCTGGA+GGG - chr1_2:69203526-69203545 None:intergenic 50.0%
AAAGCTCGTGGATGTTCTGG+AGG - chr1_2:69203527-69203546 None:intergenic 50.0%
TGAGTTCTCCGGCGGTATTG+CGG - chr1_2:69194616-69194635 None:intergenic 55.0%
GATTCCGATGAGTTCTCCGG+CGG - chr1_2:69194624-69194643 None:intergenic 55.0%
GCGGATTCCGATGAGTTCTC+CGG - chr1_2:69194627-69194646 None:intergenic 55.0%
GAGAACTCATCGGAATCCGC+CGG + chr1_2:69194627-69194646 Msa0088160:CDS 55.0%
AGAACTCATCGGAATCCGCC+GGG + chr1_2:69194628-69194647 Msa0088160:CDS 55.0%
CGCAACAGCAACAGTATCCG+GGG - chr1_2:69195395-69195414 None:intergenic 55.0%
CCCATCTTATATCTCCCCCG+TGG + chr1_2:69196118-69196137 Msa0088160:intron 55.0%
! TGAGAGTGCACCAAGCAGAC+CGG - chr1_2:69196234-69196253 None:intergenic 55.0%
!! GTCTGCTTGGTGCACTCTCA+TGG + chr1_2:69196234-69196253 Msa0088160:CDS 55.0%
GCAACGGCAGATGTTAGCAG+TGG - chr1_2:69197252-69197271 None:intergenic 55.0%
CCGCCAATGCTGAACTGCTA+AGG - chr1_2:69198553-69198572 None:intergenic 55.0%
GGTTGCACTTGAGAGCCCTA+CGG - chr1_2:69198741-69198760 None:intergenic 55.0%
! TTGGGACTCTGGAGGCTACA+TGG + chr1_2:69198823-69198842 Msa0088160:intron 55.0%
CGTCAGGACAACCAACAAGC+TGG + chr1_2:69199018-69199037 Msa0088160:intron 55.0%
AGCCACATCGACCAGCTTGT+TGG - chr1_2:69199032-69199051 None:intergenic 55.0%
ACCACTTCCCACATGCCTGT+TGG + chr1_2:69199077-69199096 Msa0088160:intron 55.0%
ACCAACAGGCATGTGGGAAG+TGG - chr1_2:69199081-69199100 None:intergenic 55.0%
CTCTCCACTTCCATTCCCTC+TGG - chr1_2:69199479-69199498 None:intergenic 55.0%
AGGGCAAAATGGGGAAGGCT+AGG + chr1_2:69199789-69199808 Msa0088160:intron 55.0%
GGGGCAGATCGCAATTAAGG+TGG - chr1_2:69199986-69200005 None:intergenic 55.0%
GCCCCCAATTGCCTTTGTCT+TGG + chr1_2:69200001-69200020 Msa0088160:intron 55.0%
CCCCACGGTAGATCTTGGAT+AGG - chr1_2:69200168-69200187 None:intergenic 55.0%
GGAATCCCCACGGTAGATCT+TGG - chr1_2:69200173-69200192 None:intergenic 55.0%
GCACTCCTCACCTTACAAGC+CGG + chr1_2:69200404-69200423 Msa0088160:intron 55.0%
GACACTCCTCATCTCTACCG+TGG + chr1_2:69200443-69200462 Msa0088160:intron 55.0%
CACTCCTCATCTCTACCGTG+GGG + chr1_2:69200445-69200464 Msa0088160:intron 55.0%
GAATCCCCACGGTAGAGATG+AGG - chr1_2:69200452-69200471 None:intergenic 55.0%
TGCCCCTCGTTGTCTTGTGT+TGG + chr1_2:69200546-69200565 Msa0088160:intron 55.0%
!! TTGGCTTGTCTTTGAGGGGG+TGG + chr1_2:69200565-69200584 Msa0088160:intron 55.0%
CCCCACGGTAGATCTTGGAT+AGG - chr1_2:69200168-69200187 None:intergenic 55.0%
GGAATCCCCACGGTAGATCT+TGG - chr1_2:69200173-69200192 None:intergenic 55.0%
GCACTCCTCACCTTACAAGC+CGG + chr1_2:69200404-69200423 Msa0088160:intron 55.0%
GACACTCCTCATCTCTACCG+TGG + chr1_2:69200443-69200462 Msa0088160:intron 55.0%
CACTCCTCATCTCTACCGTG+GGG + chr1_2:69200445-69200464 Msa0088160:intron 55.0%
GAATCCCCACGGTAGAGATG+AGG - chr1_2:69200452-69200471 None:intergenic 55.0%
TGCCCCTCGTTGTCTTGTGT+TGG + chr1_2:69200546-69200565 Msa0088160:intron 55.0%
!! TTGGCTTGTCTTTGAGGGGG+TGG + chr1_2:69200565-69200584 Msa0088160:intron 55.0%
CCCCACGGTAGATCTTGGAT+AGG - chr1_2:69200168-69200187 None:intergenic 55.0%
GGAATCCCCACGGTAGATCT+TGG - chr1_2:69200173-69200192 None:intergenic 55.0%
GCACTCCTCACCTTACAAGC+CGG + chr1_2:69200404-69200423 Msa0088160:intron 55.0%
GACACTCCTCATCTCTACCG+TGG + chr1_2:69200443-69200462 Msa0088160:intron 55.0%
CACTCCTCATCTCTACCGTG+GGG + chr1_2:69200445-69200464 Msa0088160:intron 55.0%
GAATCCCCACGGTAGAGATG+AGG - chr1_2:69200452-69200471 None:intergenic 55.0%
GTGGCAATGCAGAATCCCCA+CGG - chr1_2:69201425-69201444 None:intergenic 55.0%
TGCCCCTCGTTGTCTTGTGT+TGG + chr1_2:69200546-69200565 Msa0088160:intron 55.0%
!! TTGGCTTGTCTTTGAGGGGG+TGG + chr1_2:69200565-69200584 Msa0088160:intron 55.0%
! TGGCTTGTCTTTGAGGGGGT+AGG + chr1_2:69200566-69200585 Msa0088160:intron 55.0%
GCACTCCTCACCTTACAAGC+TGG + chr1_2:69200404-69200423 Msa0088160:intron 55.0%
ATTATGTCCCGAGGGGATGG+AGG + chr1_2:69202929-69202948 Msa0088160:CDS 55.0%
AAGAGTTGCCTCCATCCCCT+CGG - chr1_2:69202940-69202959 None:intergenic 55.0%
CTTGGGGGATTGATAGGTGC+AGG + chr1_2:69202999-69203018 Msa0088160:CDS 55.0%
CCAGGGAGAAGACCAAGAAG+TGG - chr1_2:69203116-69203135 None:intergenic 55.0%
! CCACTTCTTGGTCTTCTCCC+TGG + chr1_2:69203113-69203132 Msa0088160:CDS 55.0%
GCAATCTCAAGGAAGGCCAG+TGG - chr1_2:69203210-69203229 None:intergenic 55.0%
ACGATGCTAAAGTTGCCGCC+AGG + chr1_2:69203324-69203343 Msa0088160:three_prime_UTR 55.0%
CGATGCTAAAGTTGCCGCCA+GGG + chr1_2:69203325-69203344 Msa0088160:three_prime_UTR 55.0%
GGTTTACAACAAGGCCCTGG+CGG - chr1_2:69203342-69203361 None:intergenic 55.0%
ATGCTAGGCAGTAGCCACCA+AGG + chr1_2:69203487-69203506 Msa0088160:three_prime_UTR 55.0%
CCGGACATTTCAGTTCCCGG+CGG - chr1_2:69194646-69194665 None:intergenic 60.0%
CCGCCGGGAACTGAAATGTC+CGG + chr1_2:69194643-69194662 Msa0088160:CDS 60.0%
CGGAAAGCGGATGTCGACCT+CGG - chr1_2:69194676-69194695 None:intergenic 60.0%
! ATGGTTGTGGAAAGGGCGCG+TGG + chr1_2:69196989-69197008 Msa0088160:CDS 60.0%
GTGGCAATGCGGAATCCCCA+CGG - chr1_2:69200183-69200202 None:intergenic 60.0%
TTGCCACGCTTCGTGCCCAT+TGG + chr1_2:69200196-69200215 Msa0088160:intron 60.0%
TGCCACGCTTCGTGCCCATT+GGG + chr1_2:69200197-69200216 Msa0088160:intron 60.0%
GTGGCAGTGCAGAATCCCCA+CGG - chr1_2:69200463-69200482 None:intergenic 60.0%
TGCCACGCTTCGTGCCCATT+GGG + chr1_2:69200197-69200216 Msa0088160:intron 60.0%
GTGGCAATGCGGAATCCCCA+CGG - chr1_2:69200183-69200202 None:intergenic 60.0%
TTGCCACGCTTCGTGCCCAT+TGG + chr1_2:69200196-69200215 Msa0088160:intron 60.0%
TGCCACGCTTCGTGCCCATT+GGG + chr1_2:69200197-69200216 Msa0088160:intron 60.0%
GTGGCAGTGCAGAATCCCCA+CGG - chr1_2:69200463-69200482 None:intergenic 60.0%
TGCCACGCTTCGTGCCCATT+GGG + chr1_2:69200197-69200216 Msa0088160:intron 60.0%
GTGGCAATGCGGAATCCCCA+CGG - chr1_2:69200183-69200202 None:intergenic 60.0%
TTGCCACGCTTCGTGCCCAT+TGG + chr1_2:69200196-69200215 Msa0088160:intron 60.0%
TGCCACGCTTCGTGCCCATT+GGG + chr1_2:69200197-69200216 Msa0088160:intron 60.0%
TTGCCACGCTTCGTGCCCAT+TGG + chr1_2:69200196-69200215 Msa0088160:intron 60.0%
TGCCACGCTTCGTGCCCATT+GGG + chr1_2:69200197-69200216 Msa0088160:intron 60.0%
GGCCCCTAGTTGCCTTGTGT+TGG + chr1_2:69201651-69201670 Msa0088160:intron 60.0%
AGAGTTGCCTCCATCCCCTC+GGG - chr1_2:69202939-69202958 None:intergenic 60.0%
GGCAGTAGCCACCAAGGAGA+AGG + chr1_2:69203493-69203512 Msa0088160:three_prime_UTR 60.0%
TGCGGCGAACGAGCGACGAT+CGG - chr1_2:69194598-69194617 None:intergenic 65.0%
CTCGTTCGCCGCAATACCGC+CGG + chr1_2:69194605-69194624 Msa0088160:CDS 65.0%
AAATCCCGCCCCGAGCGTGA+GGG + chr1_2:69199946-69199965 Msa0088160:intron 65.0%
AACACACCCCCTCACGCTCG+GGG - chr1_2:69199957-69199976 None:intergenic 65.0%
CAACACACCCCCTCACGCTC+GGG - chr1_2:69199958-69199977 None:intergenic 65.0%
CCAACACACCCCCTCACGCT+CGG - chr1_2:69199959-69199978 None:intergenic 65.0%
GGGCACGAAGCGTGGCAATG+CGG - chr1_2:69200194-69200213 None:intergenic 65.0%
GACCCAATGGGCACGAAGCG+TGG - chr1_2:69200202-69200221 None:intergenic 65.0%
CCCTCACGCTCGGACCCAAT+GGG - chr1_2:69200214-69200233 None:intergenic 65.0%
CCCATTGGGTCCGAGCGTGA+GGG + chr1_2:69200211-69200230 Msa0088160:intron 65.0%
CCATTGGGTCCGAGCGTGAG+GGG + chr1_2:69200212-69200231 Msa0088160:intron 65.0%
CATTGGGTCCGAGCGTGAGG+GGG + chr1_2:69200213-69200232 Msa0088160:intron 65.0%
CCAACACACCCCCTCACGCT+CGG - chr1_2:69199959-69199978 None:intergenic 65.0%
CTGCCACGCTTCGTGCCCAT+TGG + chr1_2:69200476-69200495 Msa0088160:intron 65.0%
GACCCAATGGGCACGAAGCG+TGG - chr1_2:69200202-69200221 None:intergenic 65.0%
CCCTCACGCACGGACCCAAT+GGG - chr1_2:69200494-69200513 None:intergenic 65.0%
CCCATTGGGTCCGTGCGTGA+GGG + chr1_2:69200491-69200510 Msa0088160:intron 65.0%
CCATTGGGTCCGTGCGTGAG+GGG + chr1_2:69200492-69200511 Msa0088160:intron 65.0%
CATTGGGTCCGTGCGTGAGG+GGG + chr1_2:69200493-69200512 Msa0088160:intron 65.0%
CCAACACACCCCCTCACGCA+CGG - chr1_2:69200504-69200523 None:intergenic 65.0%
GGGCACGAAGCGTGGCAATG+CGG - chr1_2:69200194-69200213 None:intergenic 65.0%
GACCCAATGGGCACGAAGCG+TGG - chr1_2:69200202-69200221 None:intergenic 65.0%
CCCTCACGCTCGGACCCAAT+GGG - chr1_2:69200214-69200233 None:intergenic 65.0%
CCCATTGGGTCCGAGCGTGA+GGG + chr1_2:69200211-69200230 Msa0088160:intron 65.0%
CCATTGGGTCCGAGCGTGAG+GGG + chr1_2:69200212-69200231 Msa0088160:intron 65.0%
CATTGGGTCCGAGCGTGAGG+GGG + chr1_2:69200213-69200232 Msa0088160:intron 65.0%
CCAACACACCCCCTCACGCT+CGG - chr1_2:69199959-69199978 None:intergenic 65.0%
CTGCCACGCTTCGTGCCCAT+TGG + chr1_2:69200476-69200495 Msa0088160:intron 65.0%
GACCCAATGGGCACGAAGCG+TGG - chr1_2:69200202-69200221 None:intergenic 65.0%
CCCTCACGCACGGACCCAAT+GGG - chr1_2:69200494-69200513 None:intergenic 65.0%
CCCATTGGGTCCGTGCGTGA+GGG + chr1_2:69200491-69200510 Msa0088160:intron 65.0%
CCATTGGGTCCGTGCGTGAG+GGG + chr1_2:69200492-69200511 Msa0088160:intron 65.0%
CATTGGGTCCGTGCGTGAGG+GGG + chr1_2:69200493-69200512 Msa0088160:intron 65.0%
CCAACACACCCCCTCACGCA+CGG - chr1_2:69200504-69200523 None:intergenic 65.0%
GGGCACGAAGCGTGGCAATG+CGG - chr1_2:69200194-69200213 None:intergenic 65.0%
GACCCAATGGGCACGAAGCG+TGG - chr1_2:69200202-69200221 None:intergenic 65.0%
CCCTCACGCTCGGACCCAAT+GGG - chr1_2:69200214-69200233 None:intergenic 65.0%
CCCATTGGGTCCGAGCGTGA+GGG + chr1_2:69200211-69200230 Msa0088160:intron 65.0%
CCATTGGGTCCGAGCGTGAG+GGG + chr1_2:69200212-69200231 Msa0088160:intron 65.0%
CATTGGGTCCGAGCGTGAGG+GGG + chr1_2:69200213-69200232 Msa0088160:intron 65.0%
CCAACACACCCCCTCACGCT+CGG - chr1_2:69199959-69199978 None:intergenic 65.0%
GACCCAATGGGCACGAAGCG+TGG - chr1_2:69200202-69200221 None:intergenic 65.0%
CCCTCACGCTCGGACCCAAT+GGG - chr1_2:69200214-69200233 None:intergenic 65.0%
CCCATTGGGTCCGAGCGTGA+GGG + chr1_2:69200211-69200230 Msa0088160:intron 65.0%
CCATTGGGTCCGAGCGTGAG+GGG + chr1_2:69200212-69200231 Msa0088160:intron 65.0%
CATTGGGTCCGAGCGTGAGG+GGG + chr1_2:69200213-69200232 Msa0088160:intron 65.0%
CCAACACACCCCCTCACGCT+CGG - chr1_2:69199959-69199978 None:intergenic 65.0%
CGAACGAGCGACGATCGGCG+AGG - chr1_2:69194593-69194612 None:intergenic 70.0%
GAAATCCCGCCCCGAGCGTG+AGG + chr1_2:69199945-69199964 Msa0088160:intron 70.0%
AATCCCGCCCCGAGCGTGAG+GGG + chr1_2:69199947-69199966 Msa0088160:intron 70.0%
! CCGAGCGTGAGGGGGTGTGT+TGG + chr1_2:69199956-69199975 Msa0088160:intron 70.0%
GCCCATTGGGTCCGAGCGTG+AGG + chr1_2:69200210-69200229 Msa0088160:intron 70.0%
CCCCTCACGCTCGGACCCAA+TGG - chr1_2:69200215-69200234 None:intergenic 70.0%
! CCGAGCGTGAGGGGGTGTGT+TGG + chr1_2:69199956-69199975 Msa0088160:intron 70.0%
GCCCATTGGGTCCGTGCGTG+AGG + chr1_2:69200490-69200509 Msa0088160:intron 70.0%
CCCCTCACGCACGGACCCAA+TGG - chr1_2:69200495-69200514 None:intergenic 70.0%
! CCGTGCGTGAGGGGGTGTGT+TGG + chr1_2:69200501-69200520 Msa0088160:intron 70.0%
GCCCATTGGGTCCGAGCGTG+AGG + chr1_2:69200210-69200229 Msa0088160:intron 70.0%
CCCCTCACGCTCGGACCCAA+TGG - chr1_2:69200215-69200234 None:intergenic 70.0%
! CCGAGCGTGAGGGGGTGTGT+TGG + chr1_2:69199956-69199975 Msa0088160:intron 70.0%
GCCCATTGGGTCCGTGCGTG+AGG + chr1_2:69200490-69200509 Msa0088160:intron 70.0%
CCCCTCACGCACGGACCCAA+TGG - chr1_2:69200495-69200514 None:intergenic 70.0%
! CCGTGCGTGAGGGGGTGTGT+TGG + chr1_2:69200501-69200520 Msa0088160:intron 70.0%
GCCCATTGGGTCCGAGCGTG+AGG + chr1_2:69200210-69200229 Msa0088160:intron 70.0%
CCCCTCACGCTCGGACCCAA+TGG - chr1_2:69200215-69200234 None:intergenic 70.0%
! CCGAGCGTGAGGGGGTGTGT+TGG + chr1_2:69199956-69199975 Msa0088160:intron 70.0%
GCCCATTGGGTCCGAGCGTG+AGG + chr1_2:69200210-69200229 Msa0088160:intron 70.0%
CCCCTCACGCTCGGACCCAA+TGG - chr1_2:69200215-69200234 None:intergenic 70.0%
! CCGAGCGTGAGGGGGTGTGT+TGG + chr1_2:69199956-69199975 Msa0088160:intron 70.0%
ATCCCGCCCCGAGCGTGAGG+GGG + chr1_2:69199948-69199967 Msa0088160:intron 75.0%
ACACCCCCTCACGCTCGGGG+CGG - chr1_2:69199954-69199973 None:intergenic 75.0%
! CACCCCCTCACGCTCGGGGC+GGG - chr1_2:69199953-69199972 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 69194082 69203872 69194082 ID=Msa0088160;Name=Msa0088160
chr1_2 mRNA 69194082 69203872 69194082 ID=Msa0088160-mRNA-1;Parent=Msa0088160;Name=Msa0088160-mRNA-1;_AED=0.12;_eAED=0.12;_QI=444|0.75|0.77|1|0.62|0.77|9|679|518
chr1_2 exon 69194082 69194739 69194082 ID=Msa0088160-mRNA-1:exon:23745;Parent=Msa0088160-mRNA-1
chr1_2 exon 69195281 69195504 69195281 ID=Msa0088160-mRNA-1:exon:23746;Parent=Msa0088160-mRNA-1
chr1_2 exon 69195997 69196061 69195997 ID=Msa0088160-mRNA-1:exon:23747;Parent=Msa0088160-mRNA-1
chr1_2 exon 69196181 69196343 69196181 ID=Msa0088160-mRNA-1:exon:23748;Parent=Msa0088160-mRNA-1
chr1_2 exon 69196977 69197125 69196977 ID=Msa0088160-mRNA-1:exon:23749;Parent=Msa0088160-mRNA-1
chr1_2 exon 69197221 69197463 69197221 ID=Msa0088160-mRNA-1:exon:23750;Parent=Msa0088160-mRNA-1
chr1_2 exon 69197570 69197675 69197570 ID=Msa0088160-mRNA-1:exon:23751;Parent=Msa0088160-mRNA-1
chr1_2 exon 69197833 69197925 69197833 ID=Msa0088160-mRNA-1:exon:23752;Parent=Msa0088160-mRNA-1
chr1_2 exon 69202894 69203872 69202894 ID=Msa0088160-mRNA-1:exon:23753;Parent=Msa0088160-mRNA-1
chr1_2 five_prime_UTR 69194082 69194525 69194082 ID=Msa0088160-mRNA-1:five_prime_utr;Parent=Msa0088160-mRNA-1
chr1_2 CDS 69194526 69194739 69194526 ID=Msa0088160-mRNA-1:cds;Parent=Msa0088160-mRNA-1
chr1_2 CDS 69195281 69195504 69195281 ID=Msa0088160-mRNA-1:cds;Parent=Msa0088160-mRNA-1
chr1_2 CDS 69195997 69196061 69195997 ID=Msa0088160-mRNA-1:cds;Parent=Msa0088160-mRNA-1
chr1_2 CDS 69196181 69196343 69196181 ID=Msa0088160-mRNA-1:cds;Parent=Msa0088160-mRNA-1
chr1_2 CDS 69196977 69197125 69196977 ID=Msa0088160-mRNA-1:cds;Parent=Msa0088160-mRNA-1
chr1_2 CDS 69197221 69197463 69197221 ID=Msa0088160-mRNA-1:cds;Parent=Msa0088160-mRNA-1
chr1_2 CDS 69197570 69197675 69197570 ID=Msa0088160-mRNA-1:cds;Parent=Msa0088160-mRNA-1
chr1_2 CDS 69197833 69197925 69197833 ID=Msa0088160-mRNA-1:cds;Parent=Msa0088160-mRNA-1
chr1_2 CDS 69202894 69203193 69202894 ID=Msa0088160-mRNA-1:cds;Parent=Msa0088160-mRNA-1
chr1_2 three_prime_UTR 69203194 69203872 69203194 ID=Msa0088160-mRNA-1:three_prime_utr;Parent=Msa0088160-mRNA-1
Gene Sequence

>Msa0088160

ATGACTTGTGTTTATGTTTTGTCTTTAATACCGTTATTGCCCTCCAAATTTCCCAATTTCTACACCTCGCCGATCGTCGCTCGTTCGCCGCAATACCGCCGGAGAACTCATCGGAATCCGCCGGGAACTGAAATGTCCGGTATCATTCCGAGGTCGACATCCGCTTTCCGACTCAACATCGACGATAGCGACTCATTATTGGGTTCTAGAACTGGTGCAGGAAAAGGCGATACGATAACTACCGAGACAGATCTAGAGGCTTCCTCTACTAGTAAAAATGCGCTTTGTAAAAACAGATATAGTACATTGTTTGGGATTGATCTATCCCCGGATACTGTTGCTGTTGCGATGGTATACTTTGTTCAAGGTGTTTTAGGACTAGCAAGGTTGGCTGTCAGTTTTTATTTAAAGGATGATTTGCATCTGGATCCTGCTGAGGCAGCTGTGATTTCTGGTATTTCTGCGTTTCCATGGCTTGTGAAACCTCTATATGGTTTTATTAGTGACTCTATCCCCCTTTTTGGTTATCGGAGAAGGTCATACCTAGTTTTATCCGGTCTGCTTGGTGCACTCTCATGGAGTCTGATGGCCACTTCTGTTGACAACAAATATAGTGCTGCTTTTTGCATACTTCTTGGATCTCTCTCTGTTGCTTTCTCGGATGTTGTTGTAGATTCAATGGTTGTGGAAAGGGCGCGTGGTGAGTCACAAAGCACTTCGGGATCTCTTCAGTCCTTATGCTGGGGTTCTTCAGCTTTTGGTGGAATTGTGAGCTCCTACTTCAGCGGGTCTTTGTTGGATGCATATGGAGTAAGGTTTGTTTTTGGTGTCACAGCATTGCTTCCACTGCTAACATCTGCCGTTGCTGTTCTTGTAAAAGAACAACCTACACTTGGTACAGCAAGAGGGCAAACCTTTTCATTTGCCAGGCCTGAGTTTTTGGAAAGTTCAAAACAGAGTATCATTCAGCTGTGGGTTTCTGTACGACAGCCTAGTATTTTTCTTCCCACATTATTTATTTTCTTGTGGCAAGCAACTCCGCATTCTGACTCCGCTATCACAAATTCTCTTGGTTTTACCCCCGAGTTTTTAGGACGTGTCAAGCTCGTTACCTCGATTGCATCTCTGCTTGGTGTTGGACTTTATAATGGATTTCTGAAGAATGTTTTACTGGTTACTGGACTAAACCGGAAGTTTGGAATAAGCGATGAGTGGTTTGCAATTGGCGATTCATTAATTCTCACTGTTTTGAGTCAGGCTTCTTTCATGCCTGTTCTTGTGCTAGCAGCAAGATTATGTCCCGAGGGGATGGAGGCAACTCTTTTTGCAACTCTCATGTCTGTATCTAATGGAGGGAGTGTTCTTGGGGGATTGATAGGTGCAGGCCTGACTCAAGTATTTGGAATTACCAAGGACAAATTTGATAACTTGGCAGCTTTGATAATCCTCTGCAATCTTAGCTCATTACTGCCTCTACCACTTCTTGGTCTTCTCCCTGGGGACAATCCTGATGCAAATCCAAAGGACGATTCCGAAATCGAGATGAAGTCTAATTGA
Protein sequence

>Msa0088160

MTCVYVLSLIPLLPSKFPNFYTSPIVARSPQYRRRTHRNPPGTEMSGIIPRSTSAFRLNIDDSDSLLGSRTGAGKGDTITTETDLEASSTSKNALCKNRYSTLFGIDLSPDTVAVAMVYFVQGVLGLARLAVSFYLKDDLHLDPAEAAVISGISAFPWLVKPLYGFISDSIPLFGYRRRSYLVLSGLLGALSWSLMATSVDNKYSAAFCILLGSLSVAFSDVVVDSMVVERARGESQSTSGSLQSLCWGSSAFGGIVSSYFSGSLLDAYGVRFVFGVTALLPLLTSAVAVLVKEQPTLGTARGQTFSFARPEFLESSKQSIIQLWVSVRQPSIFLPTLFIFLWQATPHSDSAITNSLGFTPEFLGRVKLVTSIASLLGVGLYNGFLKNVLLVTGLNRKFGISDEWFAIGDSLILTVLSQASFMPVLVLAARLCPEGMEATLFATLMSVSNGGSVLGGLIGAGLTQVFGITKDKFDNLAALIILCNLSSLLPLPLLGLLPGDNPDANPKDDSEIEMKSN*