AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0089400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0089400 MtrunA17_Chr1g0207881 72.549 408 57 7 1 366 1 395 0.0 549
Msa0089400 MtrunA17_Chr1g0207931 63.679 424 94 5 1 365 85 507 0.0 518
Msa0089400 MtrunA17_Chr1g0207951 60.000 465 83 7 3 366 119 581 1.18e-177 523
Msa0089400 MtrunA17_Chr1g0207951 69.130 230 48 2 159 366 891 1119 5.11e-102 325
Msa0089400 MtrunA17_Chr1g0207951 62.353 170 54 2 3 162 651 820 6.36e-59 206
Msa0089400 MtrunA17_Chr3g0098111 64.173 254 60 3 143 366 228 480 3.98e-106 320
Msa0089400 MtrunA17_Chr3g0098111 51.737 259 106 7 1 246 1 253 4.83e-72 232
Msa0089400 MtrunA17_Chr5g0393591 41.518 448 143 10 8 360 17 440 4.88e-101 306
Msa0089400 MtrunA17_Chr1g0207861 64.173 254 60 2 143 366 227 479 1.08e-98 301
Msa0089400 MtrunA17_Chr1g0207861 68.391 174 41 3 1 162 1 172 1.73e-70 228
Msa0089400 MtrunA17_Chr1g0207831 61.290 248 66 3 142 359 220 467 1.93e-96 295
Msa0089400 MtrunA17_Chr1g0207831 65.698 172 49 3 1 162 1 172 2.06e-66 217
Msa0089400 MtrunA17_Chr1g0161351 67.382 233 45 3 159 361 272 503 8.28e-96 294
Msa0089400 MtrunA17_Chr1g0161351 64.368 174 50 3 1 162 28 201 8.47e-65 214
Msa0089400 MtrunA17_Chr1g0207971 68.018 222 46 3 159 357 236 455 2.98e-95 291
Msa0089400 MtrunA17_Chr1g0207971 60.169 236 85 5 1 231 1 232 1.26e-81 256
Msa0089400 MtrunA17_Chr8g0365811 59.108 269 64 4 135 358 693 960 1.33e-90 291
Msa0089400 MtrunA17_Chr8g0365811 59.200 250 67 2 143 358 230 478 3.39e-82 269
Msa0089400 MtrunA17_Chr8g0365811 49.618 262 112 7 3 252 490 743 3.68e-64 219
Msa0089400 MtrunA17_Chr8g0365811 62.857 175 52 4 1 162 1 175 1.56e-59 207
Msa0089400 MtrunA17_Chr1g0207911 63.158 190 57 4 1 177 1 190 2.48e-71 223
Msa0089400 MtrunA17_Chr7g0249931 31.739 460 188 15 7 355 39 483 1.36e-53 184
Msa0089400 MtrunA17_Chr8g0377941 41.518 224 107 4 164 365 250 471 8.48e-50 173
Msa0089400 MtrunA17_Chr8g0377941 31.579 152 90 3 8 148 7 155 7.17e-14 72.8
Msa0089400 MtrunA17_Chr1g0207981 43.902 205 85 2 184 360 275 477 4.16e-48 169
Msa0089400 MtrunA17_Chr1g0207981 35.294 170 94 4 7 162 12 179 8.12e-20 90.5
Msa0089400 MtrunA17_Chr8g0377921 40.488 205 93 4 178 355 261 463 9.49e-48 168
Msa0089400 MtrunA17_Chr8g0377921 33.108 148 93 2 5 148 1 146 1.23e-15 78.2
Msa0089400 MtrunA17_Chr6g0464871 45.876 194 76 4 184 352 274 463 1.52e-46 165
Msa0089400 MtrunA17_Chr6g0464871 27.108 166 98 3 8 161 23 177 9.61e-14 72.4
Msa0089400 MtrunA17_Chr7g0250001 41.150 226 103 5 154 355 228 447 2.81e-46 164
Msa0089400 MtrunA17_Chr7g0250001 33.553 152 80 3 4 145 2 142 1.43e-14 74.7
Msa0089400 MtrunA17_Chr6g0464841 42.500 200 85 5 179 352 256 451 4.41e-45 160
Msa0089400 MtrunA17_Chr6g0464841 27.711 166 97 4 8 161 11 165 1.83e-13 71.2
Msa0089400 MtrunA17_Chr6g0464861 42.708 192 81 4 186 352 263 450 8.97e-44 157
Msa0089400 MtrunA17_Chr6g0464861 30.769 156 104 3 8 161 11 164 1.32e-15 77.8
Msa0089400 MtrunA17_Chr7g0249961 41.709 199 87 4 178 352 63 256 2.01e-43 151
Msa0089400 MtrunA17_Chr3g0121991 41.014 217 91 5 174 355 331 545 2.81e-43 157
Msa0089400 MtrunA17_Chr3g0121991 32.450 151 86 4 8 149 79 222 2.75e-15 77.0
Msa0089400 MtrunA17_Chr6g0464881 41.000 200 89 4 184 358 262 457 4.65e-43 155
Msa0089400 MtrunA17_Chr6g0464881 31.579 133 87 3 1 131 5 135 3.91e-13 70.5
Msa0089400 MtrunA17_Chr7g0249981 41.089 202 90 4 178 355 270 466 2.53e-42 154
Msa0089400 MtrunA17_Chr7g0249981 29.730 148 92 4 7 149 24 164 4.98e-13 70.1
Msa0089400 MtrunA17_Chr5g0414331 40.609 197 89 3 181 353 259 451 1.25e-41 151
Msa0089400 MtrunA17_Chr5g0414331 35.185 162 88 3 7 161 12 163 9.88e-23 99.0
Msa0089400 MtrunA17_Chr5g0401721 37.864 206 94 4 180 355 269 470 2.80e-41 150
Msa0089400 MtrunA17_Chr3g0122001 41.121 214 87 5 177 355 743 952 4.46e-41 154
Msa0089400 MtrunA17_Chr3g0122001 39.631 217 95 4 174 355 258 473 2.70e-39 149
Msa0089400 MtrunA17_Chr3g0122001 35.762 151 81 6 8 149 486 629 1.19e-15 78.6
Msa0089400 MtrunA17_Chr3g0122001 31.333 150 89 3 8 149 6 149 6.09e-15 76.6
Msa0089400 MtrunA17_Chr4g0053501 36.486 222 104 3 167 355 247 464 1.11e-40 149
Msa0089400 MtrunA17_Chr4g0053501 36.774 155 88 4 7 155 10 160 2.55e-21 95.1
Msa0089400 MtrunA17_Chr8g0380531 38.614 202 96 3 182 357 260 459 1.19e-40 149
Msa0089400 MtrunA17_Chr8g0380531 31.875 160 98 2 7 159 9 164 1.22e-19 90.1
Msa0089400 MtrunA17_Chr4g0053321 36.937 222 103 3 167 355 262 479 1.29e-40 149
Msa0089400 MtrunA17_Chr4g0053321 37.179 156 84 5 7 154 25 174 1.58e-19 89.7
Msa0089400 MtrunA17_Chr6g0464921 39.691 194 91 2 186 355 264 455 3.25e-40 147
Msa0089400 MtrunA17_Chr6g0464921 27.326 172 108 5 8 169 11 175 3.02e-11 64.7
Msa0089400 MtrunA17_Chr5g0423981 25.282 443 228 8 8 355 10 444 3.97e-40 147
Msa0089400 MtrunA17_Chr5g0414321 39.691 194 91 2 186 355 260 451 1.39e-39 146
Msa0089400 MtrunA17_Chr5g0414321 33.750 160 93 3 7 161 10 161 8.50e-22 96.3
Msa0089400 MtrunA17_Chr6g0454221 32.653 245 126 5 147 363 5 238 2.52e-39 141
Msa0089400 MtrunA17_Chr6g0454121 32.558 258 135 5 129 355 229 478 8.70e-39 144
Msa0089400 MtrunA17_Chr6g0454131 32.576 264 139 6 129 361 229 484 8.77e-39 144
Msa0089400 MtrunA17_Chr8g0336331 32.042 284 139 8 100 355 219 476 9.08e-39 144
Msa0089400 MtrunA17_Chr6g0454171 30.537 298 162 8 70 355 45 309 1.06e-38 140
Msa0089400 MtrunA17_Chr6g0454191 32.171 258 136 5 129 355 231 480 1.68e-38 143
Msa0089400 MtrunA17_Chr7g0217881 32.042 284 138 8 100 355 205 461 3.75e-38 142
Msa0089400 MtrunA17_Chr6g0454401 32.765 293 142 8 91 355 215 480 4.92e-38 142
Msa0089400 MtrunA17_Chr2g0278711 31.818 264 131 5 122 355 232 476 1.79e-37 140
Msa0089400 MtrunA17_Chr6g0454341 31.801 261 130 6 123 355 237 477 3.33e-37 140
Msa0089400 MtrunA17_Chr3g0118721 33.333 213 105 3 172 355 85 289 3.92e-37 135
Msa0089400 MtrunA17_Chr3g0078841 30.952 294 145 7 90 355 214 477 3.96e-37 139
Msa0089400 MtrunA17_Chr6g0454201 30.690 290 146 6 94 355 218 480 4.16e-37 139
Msa0089400 MtrunA17_Chr6g0454271 30.268 261 133 5 123 355 47 286 7.68e-37 135
Msa0089400 MtrunA17_Chr6g0454301 31.690 284 140 7 100 355 473 730 8.68e-37 141
Msa0089400 MtrunA17_Chr6g0454301 30.045 223 120 4 160 354 14 228 3.37e-29 119
Msa0089400 MtrunA17_Chr3g0118771 33.971 209 101 4 176 355 288 488 1.22e-36 138
Msa0089400 MtrunA17_Chr6g0454151 31.801 261 129 6 123 355 238 477 2.01e-36 137
Msa0089400 MtrunA17_Chr6g0453961 30.000 290 148 6 94 355 227 489 6.60e-36 136
Msa0089400 MtrunA17_Chr3g0118711 35.266 207 97 4 178 355 282 480 1.31e-35 135
Msa0089400 MtrunA17_Chr5g0426431 31.142 289 142 7 96 355 217 477 2.20e-35 135
Msa0089400 MtrunA17_Chr6g0454361 30.634 284 142 8 100 355 224 480 2.78e-35 134
Msa0089400 MtrunA17_Chr3g0118671 34.928 209 99 4 178 357 275 475 3.44e-35 134
Msa0089400 MtrunA17_Chr3g0112771 36.275 204 94 3 182 355 254 451 1.19e-34 132
Msa0089400 MtrunA17_Chr7g0218791 36.449 214 101 6 164 352 238 441 1.50e-34 132
Msa0089400 MtrunA17_Chr6g0452771 30.651 261 132 7 123 355 240 479 4.23e-34 131
Msa0089400 MtrunA17_Chr8g0336691 36.522 230 125 6 152 364 694 919 8.81e-34 132
Msa0089400 MtrunA17_Chr8g0336691 44.604 139 68 4 215 349 1240 1373 4.78e-27 113
Msa0089400 MtrunA17_Chr8g0336691 29.457 258 133 5 152 364 227 480 6.15e-26 109
Msa0089400 MtrunA17_Chr6g0454321 33.981 206 100 4 164 341 266 463 1.28e-33 131
Msa0089400 MtrunA17_Chr6g0454141 29.885 261 134 6 123 355 240 479 1.35e-33 130
Msa0089400 MtrunA17_Chr6g0454181 30.620 258 140 5 129 355 230 479 1.52e-33 130
Msa0089400 MtrunA17_Chr4g0044511 33.486 218 108 4 179 359 291 508 1.70e-33 130
Msa0089400 MtrunA17_Chr6g0453951 32.653 245 125 5 139 355 294 526 2.27e-33 130
Msa0089400 MtrunA17_Chr6g0454331 28.302 318 183 7 70 355 174 478 2.61e-33 129
Msa0089400 MtrunA17_Chr4g0050341 33.175 211 106 3 175 356 287 491 2.16e-32 127
Msa0089400 MtrunA17_Chr8g0359821 30.116 259 140 6 129 355 228 477 2.78e-32 126
Msa0089400 MtrunA17_Chr3g0118691 31.884 207 104 3 178 355 284 482 3.27e-32 126
Msa0089400 MtrunA17_Chr5g0426401 31.387 274 129 8 107 349 59 304 3.60e-32 122
Msa0089400 MtrunA17_Chr4g0072761 34.000 200 103 2 178 353 256 450 4.83e-32 125
Msa0089400 MtrunA17_Chr7g0218811 33.500 200 97 6 181 352 255 446 1.22e-31 124
Msa0089400 MtrunA17_Chr3g0118701 32.367 207 103 3 178 355 284 482 1.83e-31 124
Msa0089400 MtrunA17_Chr6g0463851 29.832 238 120 5 165 357 249 484 1.85e-31 124
Msa0089400 MtrunA17_Chr6g0454371 39.007 141 80 1 215 355 36 170 1.91e-31 117
Msa0089400 MtrunA17_Chr7g0243851 24.429 438 239 16 7 356 10 443 2.97e-31 123
Msa0089400 MtrunA17_Chr3g0092641 28.522 291 151 7 94 355 215 477 6.23e-31 122
Msa0089400 MtrunA17_Chr6g0454231 35.897 195 105 5 162 355 43 218 1.26e-30 121
Msa0089400 MtrunA17_Chr6g0454291 29.388 245 133 5 139 355 244 476 1.41e-30 121
Msa0089400 MtrunA17_Chr4g0066261 30.556 216 106 5 186 357 268 483 1.47e-30 121
Msa0089400 MtrunA17_Chr7g0243871 30.370 270 139 9 133 356 207 473 1.72e-30 121
Msa0089400 MtrunA17_Chr6g0462551 33.790 219 109 5 178 362 255 471 2.53e-30 120
Msa0089400 MtrunA17_Chr8g0373301 32.751 229 106 6 160 349 241 460 2.73e-30 120
Msa0089400 MtrunA17_Chr8g0339461 29.966 297 145 9 107 355 190 471 2.99e-30 120
Msa0089400 MtrunA17_Chr7g0243631 30.973 226 112 5 173 356 264 487 3.53e-30 120
Msa0089400 MtrunA17_Chr6g0463861 30.252 238 119 6 165 357 240 475 3.79e-30 120
Msa0089400 MtrunA17_Chr6g0454211 32.710 214 108 5 170 355 561 766 7.47e-30 120
Msa0089400 MtrunA17_Chr6g0454211 34.266 143 84 4 129 267 100 236 1.96e-17 84.0
Msa0089400 MtrunA17_Chr4g0072771 32.487 197 104 2 181 353 272 463 7.93e-30 119
Msa0089400 MtrunA17_Chr8g0339451 31.224 237 111 6 160 351 230 459 8.93e-30 119
Msa0089400 MtrunA17_Chr6g0454261 28.295 258 146 5 129 355 230 479 1.00e-29 119
Msa0089400 MtrunA17_Chr7g0243931 31.858 226 110 6 173 356 268 491 1.20e-29 119
Msa0089400 MtrunA17_Chr6g0454351 39.007 141 80 1 215 355 330 464 3.65e-29 117
Msa0089400 MtrunA17_Chr8g0339631 35.227 176 110 3 188 362 303 475 4.48e-29 117
Msa0089400 MtrunA17_Chr8g0339601 30.802 237 112 6 160 351 97 326 7.52e-29 114
Msa0089400 MtrunA17_Chr7g0232391 33.180 217 95 7 175 348 249 458 7.85e-29 116
Msa0089400 MtrunA17_Chr7g0218821 32.500 200 99 7 181 352 256 447 1.58e-28 115
Msa0089400 MtrunA17_Chr6g0462541 32.701 211 108 4 181 359 259 467 2.10e-28 115
Msa0089400 MtrunA17_Chr8g0335161 31.081 222 106 6 174 349 240 460 3.07e-28 114
Msa0089400 MtrunA17_Chr5g0419771 29.787 235 114 6 166 355 284 512 3.85e-28 115
Msa0089400 MtrunA17_Chr1g0179901 32.000 225 111 4 173 355 269 493 4.13e-28 114
Msa0089400 MtrunA17_Chr4g0066171 31.481 216 101 6 186 357 266 478 5.68e-28 114
Msa0089400 MtrunA17_Chr6g0462571 31.604 212 111 3 180 359 256 465 5.97e-28 114
Msa0089400 MtrunA17_Chr4g0014061 36.073 219 90 9 177 348 250 465 6.41e-28 114
Msa0089400 MtrunA17_Chr6g0486251 30.000 220 113 4 172 351 242 460 7.07e-28 114
Msa0089400 MtrunA17_Chr6g0486201 30.000 220 113 4 172 351 242 460 7.07e-28 114
Msa0089400 MtrunA17_Chr7g0243711 28.295 258 144 5 140 356 60 317 7.65e-28 111
Msa0089400 MtrunA17_Chr4g0060511 30.531 226 113 6 173 356 265 488 8.38e-28 114
Msa0089400 MtrunA17_Chr4g0066281 30.093 216 106 5 186 358 256 469 8.84e-28 113
Msa0089400 MtrunA17_Chr8g0374941 31.330 233 112 9 171 357 1189 1419 9.31e-28 115
Msa0089400 MtrunA17_Chr8g0374941 28.169 213 105 7 171 337 716 926 4.01e-21 95.5
Msa0089400 MtrunA17_Chr8g0374941 29.439 214 103 9 171 338 251 462 5.75e-21 94.7
Msa0089400 MtrunA17_Chr4g0066221 30.833 240 115 7 165 357 247 482 1.06e-27 113
Msa0089400 MtrunA17_Chr7g0265141 39.735 151 76 4 217 354 336 484 1.45e-27 113
Msa0089400 MtrunA17_Chr8g0339441 38.323 167 98 3 188 351 261 425 1.61e-27 112
Msa0089400 MtrunA17_Chr8g0374971 23.591 479 243 14 1 357 5 482 1.78e-27 112
Msa0089400 MtrunA17_Chr5g0403641 28.033 239 124 4 160 354 267 501 1.80e-27 113
Msa0089400 MtrunA17_Chr7g0243681 32.394 213 100 5 186 356 270 480 1.83e-27 112
Msa0089400 MtrunA17_Chr7g0218831 31.000 200 102 7 181 352 245 436 1.87e-27 112
Msa0089400 MtrunA17_Chr5g0410941 32.407 216 102 7 186 357 276 491 1.90e-27 112
Msa0089400 MtrunA17_Chr7g0243911 29.648 199 107 3 182 349 18 214 1.95e-27 107
Msa0089400 MtrunA17_Chr4g0066151 29.536 237 120 6 165 356 246 480 2.08e-27 112
Msa0089400 MtrunA17_Chr8g0374901 29.614 233 116 7 171 357 250 480 2.23e-27 112
Msa0089400 MtrunA17_Chr4g0066201 32.558 215 98 6 186 356 264 475 2.24e-27 112
Msa0089400 MtrunA17_Chr7g0232411 33.180 217 95 7 175 348 249 458 2.38e-27 112
Msa0089400 MtrunA17_Chr6g0449931 32.381 210 97 4 182 348 253 460 2.39e-27 112
Msa0089400 MtrunA17_Chr7g0243771 30.841 214 109 4 182 356 263 476 2.91e-27 112
Msa0089400 MtrunA17_Chr8g0355221 28.879 232 126 4 173 365 265 496 3.21e-27 112
Msa0089400 MtrunA17_Chr7g0265101 30.769 221 110 7 179 358 271 489 3.86e-27 112
Msa0089400 MtrunA17_Chr8g0336651 31.020 245 120 5 152 349 995 1237 5.06e-27 112
Msa0089400 MtrunA17_Chr8g0336651 31.557 244 116 7 152 349 220 458 1.94e-26 111
Msa0089400 MtrunA17_Chr8g0336651 34.061 229 128 9 152 364 560 781 8.02e-25 106
Msa0089400 MtrunA17_Chr8g0336741 32.510 243 113 7 152 348 227 464 5.47e-27 111
Msa0089400 MtrunA17_Chr7g0243951 29.464 224 117 6 173 356 262 484 5.75e-27 111
Msa0089400 MtrunA17_Chr8g0335141 32.512 203 96 4 186 348 260 461 5.95e-27 111
Msa0089400 MtrunA17_Chr1g0165701 30.317 221 117 5 173 356 264 484 7.48e-27 111
Msa0089400 MtrunA17_Chr7g0243801 30.374 214 110 4 182 356 264 477 8.82e-27 110
Msa0089400 MtrunA17_Chr5g0431441 30.594 219 129 5 160 355 247 465 9.57e-27 110
Msa0089400 MtrunA17_Chr7g0275511 32.287 223 100 7 186 362 266 483 1.07e-26 110
Msa0089400 MtrunA17_Chr7g0243781 29.493 217 110 5 182 356 261 476 1.27e-26 110
Msa0089400 MtrunA17_Chr7g0218311 29.911 224 111 6 178 357 264 485 1.40e-26 110
Msa0089400 MtrunA17_Chr4g0066131 28.992 238 122 6 165 357 241 476 1.82e-26 110
Msa0089400 MtrunA17_Chr5g0448551 35.593 177 77 4 153 292 217 393 1.83e-26 109
Msa0089400 MtrunA17_Chr7g0218841 30.500 200 103 6 181 352 246 437 2.32e-26 109
Msa0089400 MtrunA17_Chr1g0153461 39.286 168 88 6 188 349 47 206 3.37e-26 104
Msa0089400 MtrunA17_Chr8g0336731 31.557 244 116 7 152 349 246 484 3.53e-26 109
Msa0089400 MtrunA17_Chr5g0432731 30.455 220 129 5 160 355 77 296 3.58e-26 106
Msa0089400 MtrunA17_Chr8g0355011 37.241 145 84 2 215 358 227 365 3.95e-26 107
Msa0089400 MtrunA17_Chr5g0412131 31.579 209 107 5 175 356 271 470 4.04e-26 108
Msa0089400 MtrunA17_Chr8g0366391 30.144 209 115 3 179 356 270 478 4.09e-26 108
Msa0089400 MtrunA17_Chr6g0462531 32.487 197 99 3 180 344 259 453 4.17e-26 108
Msa0089400 MtrunA17_Chr7g0232311 42.963 135 74 2 215 348 324 456 4.18e-26 108
Msa0089400 MtrunA17_Chr3g0079731 30.172 232 114 6 160 348 247 473 4.59e-26 108
Msa0089400 MtrunA17_Chr1g0153451 30.833 240 122 6 152 349 220 457 5.23e-26 108
Msa0089400 MtrunA17_Chr4g0032331 32.020 203 96 6 174 344 246 438 5.85e-26 108
Msa0089400 MtrunA17_Chr7g0232331 28.374 289 153 9 111 357 192 468 5.85e-26 108
Msa0089400 MtrunA17_Chr7g0232401 30.918 207 100 3 179 344 252 456 6.06e-26 108
Msa0089400 MtrunA17_Chr7g0265051 30.702 228 114 8 173 358 262 487 6.15e-26 108
Msa0089400 MtrunA17_Chr3g0118661 30.693 202 106 3 181 354 283 478 9.02e-26 108
Msa0089400 MtrunA17_Chr8g0347281 30.392 204 98 4 187 348 264 465 1.13e-25 107
Msa0089400 MtrunA17_Chr4g0066141 30.824 279 171 10 98 356 76 352 1.17e-25 106
Msa0089400 MtrunA17_Chr5g0442561 28.346 254 126 7 152 355 229 476 1.20e-25 107
Msa0089400 MtrunA17_Chr7g0243861 30.263 228 111 6 173 356 265 488 1.28e-25 107
Msa0089400 MtrunA17_Chr3g0118751 32.240 183 110 5 176 355 273 444 1.45e-25 107
Msa0089400 MtrunA17_Chr7g0265111 30.088 226 115 6 173 355 290 515 1.87e-25 107
Msa0089400 MtrunA17_Chr5g0412111 31.019 216 113 4 168 356 256 462 2.10e-25 106
Msa0089400 MtrunA17_Chr6g0459311 37.681 138 84 2 213 349 329 465 2.18e-25 106
Msa0089400 MtrunA17_Chr7g0275681 29.954 217 113 6 179 358 269 483 2.26e-25 107
Msa0089400 MtrunA17_Chr7g0235051 29.412 221 117 4 173 354 232 452 2.33e-25 106
Msa0089400 MtrunA17_Chr3g0112761 31.034 203 103 4 176 348 247 442 3.07e-25 106
Msa0089400 MtrunA17_Chr8g0347271 29.412 204 100 4 187 348 265 466 4.22e-25 105
Msa0089400 MtrunA17_Chr6g0462521 30.732 205 106 4 172 344 239 439 4.88e-25 105
Msa0089400 MtrunA17_Chr5g0448521 30.374 214 98 5 177 344 248 456 5.55e-25 105
Msa0089400 MtrunA17_Chr5g0442511 30.165 242 113 6 161 356 263 494 5.65e-25 105
Msa0089400 MtrunA17_Chr5g0431361 28.992 238 142 6 141 355 220 453 7.90e-25 105
Msa0089400 MtrunA17_Chr4g0011051 38.158 152 80 5 218 357 340 489 1.09e-24 105
Msa0089400 MtrunA17_Chr1g0173121 30.288 208 109 3 186 357 257 464 1.12e-24 104
Msa0089400 MtrunA17_Chr2g0294931 29.358 218 106 6 186 357 268 483 1.15e-24 104
Msa0089400 MtrunA17_Chr5g0412101 29.902 204 105 4 182 356 277 471 1.72e-24 104
Msa0089400 MtrunA17_Chr7g0232341 29.767 215 106 6 175 348 249 459 1.75e-24 104
Msa0089400 MtrunA17_Chr5g0416741 27.149 221 124 4 173 356 264 484 1.90e-24 104
Msa0089400 MtrunA17_Chr2g0294921 29.817 218 105 6 186 357 417 632 2.56e-24 104
Msa0089400 MtrunA17_Chr1g0159551 31.455 213 104 5 184 357 252 461 4.90e-24 102
Msa0089400 MtrunA17_Chr4g0044501 32.178 202 104 5 186 355 275 475 5.06e-24 102
Msa0089400 MtrunA17_Chr7g0265151 28.829 222 117 5 179 359 266 487 5.12e-24 102
Msa0089400 MtrunA17_Chr5g0428081 28.700 223 113 6 179 357 261 481 6.13e-24 102
Msa0089400 MtrunA17_Chr5g0431371 30.081 246 129 9 141 355 215 448 9.40e-24 102
Msa0089400 MtrunA17_Chr8g0336261 41.346 104 55 1 215 318 36 133 1.14e-23 95.1
Msa0089400 MtrunA17_Chr5g0431401 30.453 243 132 8 141 355 215 448 1.27e-23 101
Msa0089400 MtrunA17_Chr8g0361371 30.631 222 107 5 186 361 256 476 1.52e-23 101
Msa0089400 MtrunA17_Chr5g0442581 27.574 272 138 8 147 363 224 491 1.69e-23 101
Msa0089400 MtrunA17_Chr3g0079711 37.037 135 83 2 215 348 48 181 1.84e-23 96.3
Msa0089400 MtrunA17_Chr8g0374931 28.241 216 111 6 186 357 268 483 2.48e-23 100
Msa0089400 MtrunA17_Chr5g0442521 28.807 243 120 6 160 355 239 475 3.47e-23 100
Msa0089400 MtrunA17_Chr5g0431421 30.364 247 127 9 141 355 215 448 3.85e-23 100
Msa0089400 MtrunA17_Chr8g0350881 28.837 215 108 4 188 357 268 482 4.20e-23 100
Msa0089400 MtrunA17_Chr3g0106231 30.622 209 119 3 184 366 259 467 4.87e-23 100
Msa0089400 MtrunA17_Chr5g0442491 29.004 231 108 6 175 355 254 478 8.35e-23 99.4
Msa0089400 MtrunA17_Chr5g0429681 31.795 195 93 6 185 344 299 488 8.59e-23 99.4
Msa0089400 MtrunA17_Chr5g0440421 30.556 216 105 7 181 355 282 493 1.05e-22 99.4
Msa0089400 MtrunA17_Chr6g0463891 27.477 222 122 5 173 356 265 485 1.06e-22 99.4
Msa0089400 MtrunA17_Chr5g0409591 30.342 234 112 7 171 360 260 486 1.08e-22 99.0
Msa0089400 MtrunA17_Chr2g0307961 39.695 131 74 4 226 355 342 468 1.19e-22 99.0
Msa0089400 MtrunA17_Chr5g0442601 27.830 212 105 4 179 344 655 864 1.21e-22 99.8
Msa0089400 MtrunA17_Chr5g0442601 31.667 180 72 6 163 297 172 345 3.13e-18 86.7
Msa0089400 MtrunA17_Chr8g0334851 30.909 165 110 3 188 351 304 465 1.22e-22 99.0
Msa0089400 MtrunA17_Chr5g0429711 29.707 239 132 8 144 355 232 461 1.45e-22 98.6
Msa0089400 MtrunA17_Chr5g0401851 27.962 211 110 6 186 356 276 484 1.62e-22 98.6
Msa0089400 MtrunA17_Chr3g0106251 30.348 201 117 3 184 362 101 300 1.72e-22 96.7
Msa0089400 MtrunA17_Chr4g0044521 30.918 207 97 6 181 344 252 455 2.05e-22 98.2
Msa0089400 MtrunA17_Chr8g0382021 28.910 211 111 3 186 357 280 490 2.10e-22 98.2
Msa0089400 MtrunA17_Chr5g0442541 31.068 206 94 6 185 344 251 454 3.00e-22 97.8
Msa0089400 MtrunA17_Chr8g0337381 39.855 138 69 5 232 365 6 133 4.30e-22 90.9
Msa0089400 MtrunA17_Chr7g0265041 35.294 153 88 4 217 358 339 491 4.39e-22 97.4
Msa0089400 MtrunA17_Chr8g0370941 33.333 159 97 4 214 365 342 498 7.15e-22 96.7
Msa0089400 MtrunA17_Chr2g0302991 29.717 212 107 5 185 357 256 464 7.17e-22 96.7
Msa0089400 MtrunA17_Chr2g0329111 32.075 212 95 8 187 352 268 476 7.25e-22 96.7
Msa0089400 MtrunA17_Chr7g0243611 30.573 157 78 2 173 298 123 279 7.92e-22 94.4
Msa0089400 MtrunA17_Chr7g0243761 31.288 163 70 5 186 308 275 435 2.28e-21 95.1
Msa0089400 MtrunA17_Chr2g0302961 29.717 212 107 5 185 357 259 467 2.33e-21 95.1
Msa0089400 MtrunA17_Chr5g0416821 26.009 223 112 5 173 356 266 474 4.64e-21 94.4
Msa0089400 MtrunA17_Chr8g0369341 28.889 225 121 7 170 360 254 473 5.24e-21 94.0
Msa0089400 MtrunA17_Chr2g0294941 29.949 197 94 7 186 338 166 362 1.50e-20 92.0
Msa0089400 MtrunA17_Chr8g0334861 34.177 158 101 3 188 344 297 452 2.45e-20 92.0
Msa0089400 MtrunA17_Chr8g0334831 30.303 231 105 5 186 361 255 484 2.75e-20 92.0
Msa0089400 MtrunA17_Chr8g0361411 30.049 203 107 6 185 357 258 455 3.49e-20 91.7
Msa0089400 MtrunA17_Chr5g0419761 27.523 218 104 6 186 355 274 485 8.19e-20 90.5
Msa0089400 MtrunA17_Chr4g0042891 31.068 206 103 6 186 356 265 466 1.07e-19 90.1
Msa0089400 MtrunA17_Chr4g0044481 30.909 165 80 4 186 322 265 423 4.09e-19 88.2
Msa0089400 MtrunA17_Chr5g0420801 28.033 239 132 7 158 360 229 463 4.19e-19 88.6
Msa0089400 MtrunA17_Chr4g0042931 28.972 214 112 6 179 356 255 464 6.91e-19 87.8
Msa0089400 MtrunA17_Chr5g0431431 26.220 328 179 15 8 285 10 324 2.61e-18 85.1
Msa0089400 MtrunA17_Chr7g0243811 29.371 143 70 2 182 293 236 378 8.08e-18 84.0
Msa0089400 MtrunA17_Chr6g0482061 28.571 217 110 7 179 356 270 480 6.79e-17 82.0
Msa0089400 MtrunA17_Chr7g0231631 25.234 214 109 5 180 356 61 260 4.57e-16 77.4
Msa0089400 MtrunA17_Chr7g0243731 39.241 79 45 2 224 301 4 80 4.82e-16 72.4
Msa0089400 MtrunA17_Chr6g0454251 36.441 118 45 3 178 267 279 394 1.24e-15 77.8
Msa0089400 MtrunA17_Chr8g0336251 27.536 207 106 5 184 356 267 463 6.91e-15 75.9
Msa0089400 MtrunA17_Chr8g0336321 27.536 207 106 5 184 356 267 463 7.30e-15 75.5
Msa0089400 MtrunA17_Chr2g0319751 30.323 155 98 5 186 331 257 410 9.01e-15 75.9
Msa0089400 MtrunA17_Chr2g0319751 34.314 102 64 3 212 311 789 889 4.42e-11 64.7
Msa0089400 MtrunA17_Chr5g0427571 28.655 171 89 3 184 324 101 268 3.83e-14 72.4
Msa0089400 MtrunA17_Chr2g0283041 35.537 121 74 3 215 332 314 433 3.85e-14 73.6
Msa0089400 MtrunA17_Chr4g0040691 36.634 101 61 2 212 311 314 412 3.89e-14 73.6
Msa0089400 MtrunA17_Chr4g0029131 27.473 182 95 5 187 332 256 436 7.47e-14 72.8
Msa0089400 MtrunA17_Chr7g0232351 29.921 127 49 3 181 267 252 378 1.01e-13 71.6
Msa0089400 MtrunA17_Chr4g0040711 35.644 101 62 2 212 311 314 412 3.24e-13 70.5
Msa0089400 MtrunA17_Chr7g0241801 27.374 179 102 5 178 332 232 406 5.35e-13 69.7
Msa0089400 MtrunA17_Chr1g0196851 32.800 125 73 3 215 332 356 476 8.92e-13 69.3
Msa0089400 MtrunA17_Chr8g0377911 30.147 136 89 2 9 140 8 141 1.52e-12 65.1
Msa0089400 MtrunA17_Chr4g0069611 30.460 174 92 4 181 327 262 433 1.85e-12 68.2
Msa0089400 MtrunA17_Chr7g0241781 25.234 214 122 7 178 364 232 434 2.20e-12 67.8
Msa0089400 MtrunA17_Chr8g0357361 28.676 136 68 4 186 293 118 252 2.38e-12 66.6
Msa0089400 MtrunA17_Chr2g0319791 32.258 124 79 4 212 331 312 434 3.58e-12 67.4
Msa0089400 MtrunA17_Chr4g0029151 27.568 185 91 5 187 332 264 444 5.28e-12 67.0
Msa0089400 MtrunA17_Chr2g0319761 32.000 125 80 4 212 332 312 435 8.82e-12 66.2
Msa0089400 MtrunA17_Chr2g0319731 30.464 151 73 5 188 307 276 425 9.39e-12 66.2
Msa0089400 MtrunA17_Chr6g0454391 40.845 71 36 1 239 309 8 72 1.75e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0089400 AT4G15480.1 51.152 217 73 4 170 355 264 478 4.01e-63 209
Msa0089400 AT4G15480.1 47.904 167 77 2 6 162 17 183 6.55e-44 158
Msa0089400 AT3G21560.1 47.414 232 89 4 164 364 252 481 1.26e-58 197
Msa0089400 AT3G21560.1 47.647 170 77 3 5 162 9 178 2.45e-44 160
Msa0089400 AT4G15500.1 45.536 224 93 4 170 366 253 474 5.90e-58 195
Msa0089400 AT4G15500.1 46.429 168 80 5 1 161 3 167 6.91e-39 144
Msa0089400 AT4G14090.1 31.510 457 200 13 2 354 7 454 1.25e-55 189
Msa0089400 AT4G15490.1 43.636 220 96 3 169 362 256 473 6.93e-55 187
Msa0089400 AT4G15490.1 47.273 165 74 4 8 161 8 170 5.40e-39 145
Msa0089400 AT2G43820.1 36.937 222 115 4 160 358 230 449 9.57e-46 162
Msa0089400 AT2G43820.1 28.161 174 117 6 8 176 7 177 2.59e-13 71.2
Msa0089400 AT1G05530.1 29.221 462 201 13 8 355 5 454 1.98e-45 162
Msa0089400 AT2G23260.1 39.320 206 97 4 175 355 251 453 5.01e-45 160
Msa0089400 AT2G23260.1 34.868 152 85 5 8 154 10 152 2.65e-15 77.4
Msa0089400 AT1G05675.1 41.885 191 85 2 186 352 261 449 3.80e-44 158
Msa0089400 AT2G31790.1 39.801 201 93 3 178 352 255 453 1.85e-43 156
Msa0089400 AT1G05680.1 41.361 191 86 2 186 352 261 449 2.16e-43 156
Msa0089400 AT2G31750.1 37.879 198 95 3 186 357 261 456 1.03e-41 152
Msa0089400 AT2G31750.2 37.879 198 95 3 186 357 261 456 1.75e-41 152
Msa0089400 AT1G05560.2 40.187 214 85 4 180 355 293 501 1.34e-40 150
Msa0089400 AT1G05560.2 34.000 150 85 4 6 146 53 197 3.46e-14 74.3
Msa0089400 AT1G05560.1 40.187 214 85 4 180 355 243 451 1.38e-40 149
Msa0089400 AT1G05560.1 34.000 150 85 4 6 146 3 147 2.71e-14 74.3
Msa0089400 AT2G43840.2 36.449 214 101 4 177 356 235 447 2.56e-40 148
Msa0089400 AT2G43840.2 27.083 144 100 3 8 148 7 148 3.41e-12 67.8
Msa0089400 AT2G43840.1 36.449 214 101 4 177 356 235 447 2.70e-40 148
Msa0089400 AT2G43840.1 27.083 144 100 3 8 148 7 148 3.35e-12 67.8
Msa0089400 AT2G23250.1 36.893 206 102 4 175 355 233 435 1.14e-38 143
Msa0089400 AT2G23250.1 32.886 149 85 4 11 154 1 139 1.43e-12 68.9
Msa0089400 AT4G15550.1 37.900 219 96 5 172 354 258 472 9.07e-37 139
Msa0089400 AT4G15550.1 30.719 153 94 3 8 148 13 165 5.73e-16 79.3
Msa0089400 AT2G15490.3 35.238 210 104 3 181 358 271 480 3.56e-36 137
Msa0089400 AT2G36970.1 33.493 209 104 3 179 358 271 473 7.93e-36 136
Msa0089400 AT2G15490.1 34.742 213 104 3 181 358 271 483 9.64e-36 136
Msa0089400 AT1G24100.1 36.735 196 99 3 186 357 266 460 9.55e-35 133
Msa0089400 AT1G24100.1 26.000 150 107 2 8 156 11 157 2.30e-13 71.6
Msa0089400 AT1G22340.1 31.313 297 134 10 100 356 221 487 1.16e-34 133
Msa0089400 AT2G15480.1 34.286 210 106 3 181 358 274 483 2.60e-34 132
Msa0089400 AT1G22380.1 29.586 338 171 12 58 355 170 480 4.86e-34 131
Msa0089400 AT1G30530.1 34.021 194 99 2 188 357 264 452 1.14e-32 127
Msa0089400 AT5G17050.1 32.143 252 130 5 141 363 220 459 2.44e-32 126
Msa0089400 AT1G78270.1 31.405 242 127 6 147 355 245 480 4.34e-32 126
Msa0089400 AT3G11340.1 34.848 198 93 5 182 349 247 438 1.27e-31 124
Msa0089400 AT5G17040.2 32.836 201 106 2 181 357 144 339 1.80e-31 122
Msa0089400 AT2G15480.2 32.273 220 107 4 181 358 274 493 2.46e-31 124
Msa0089400 AT3G02100.1 30.060 336 177 11 58 358 150 462 4.12e-31 123
Msa0089400 AT5G17030.1 29.508 244 138 3 141 355 217 455 4.21e-31 123
Msa0089400 AT1G22400.1 33.173 208 100 5 161 337 263 462 4.40e-31 123
Msa0089400 AT5G17040.1 33.333 201 105 3 181 357 246 441 5.77e-31 122
Msa0089400 AT1G22360.1 29.066 289 151 9 96 355 214 477 2.55e-30 121
Msa0089400 AT2G36770.1 32.301 226 112 6 173 358 267 491 6.02e-30 120
Msa0089400 AT5G59580.1 34.300 207 100 4 180 356 248 448 6.28e-30 119
Msa0089400 AT2G36780.1 32.727 220 106 6 180 359 275 492 6.51e-30 120
Msa0089400 AT5G59590.1 33.981 206 100 3 180 355 250 449 8.66e-30 119
Msa0089400 AT3G46670.1 31.884 207 105 3 180 356 249 449 6.10e-29 117
Msa0089400 AT3G22250.1 35.955 178 81 4 180 328 268 441 8.07e-29 116
Msa0089400 AT3G46660.1 33.333 207 102 5 180 356 256 456 8.23e-29 116
Msa0089400 AT2G36800.1 34.188 234 105 10 173 362 266 494 1.35e-28 116
Msa0089400 AT2G36790.1 33.333 234 107 9 173 362 266 494 1.36e-28 116
Msa0089400 AT2G28080.1 34.597 211 99 5 179 359 274 475 1.46e-28 116
Msa0089400 AT2G36750.1 33.333 225 109 7 173 357 262 485 1.57e-28 116
Msa0089400 AT2G36760.1 32.599 227 112 6 173 359 267 492 1.74e-28 116
Msa0089400 AT3G53160.1 30.702 228 115 8 173 359 261 486 1.93e-28 116
Msa0089400 AT3G55700.1 29.720 286 135 8 94 349 195 444 2.14e-28 115
Msa0089400 AT4G34138.1 30.476 210 110 4 179 355 272 478 7.16e-28 114
Msa0089400 AT1G22370.1 27.178 287 155 7 98 355 44 305 8.45e-28 111
Msa0089400 AT4G34131.1 31.100 209 111 4 179 355 272 479 9.60e-28 114
Msa0089400 AT1G22360.2 28.028 289 142 9 96 355 214 465 1.32e-27 113
Msa0089400 AT1G01420.1 29.289 239 121 6 152 349 229 460 2.97e-27 112
Msa0089400 AT3G50740.1 31.100 209 98 4 179 342 252 459 3.02e-27 112
Msa0089400 AT1G01420.2 29.289 239 121 6 152 349 232 463 3.29e-27 112
Msa0089400 AT1G06000.1 24.766 428 238 14 8 355 10 433 6.05e-27 111
Msa0089400 AT2G30140.1 32.653 245 135 5 137 355 211 451 9.29e-27 110
Msa0089400 AT2G30140.2 32.653 245 135 5 137 355 210 450 9.57e-27 110
Msa0089400 AT1G22370.2 27.178 287 155 7 98 355 214 475 1.46e-26 110
Msa0089400 AT5G05870.1 31.068 206 106 3 180 355 255 454 1.53e-26 110
Msa0089400 AT3G16520.3 33.659 205 97 6 184 354 259 458 1.69e-26 110
Msa0089400 AT3G55710.1 33.846 195 93 3 185 349 260 448 1.91e-26 110
Msa0089400 AT4G01070.1 29.536 237 121 6 158 350 228 462 2.35e-26 110
Msa0089400 AT4G36770.1 31.472 197 89 4 185 338 253 446 2.36e-26 109
Msa0089400 AT2G30150.1 31.102 254 136 6 140 357 188 438 2.71e-26 109
Msa0089400 AT5G03490.1 29.730 259 150 8 123 357 214 464 3.13e-26 109
Msa0089400 AT2G30150.2 31.102 254 136 6 140 357 204 454 3.53e-26 109
Msa0089400 AT5G66690.1 29.665 209 99 4 179 342 247 452 4.15e-26 109
Msa0089400 AT3G46680.1 31.163 215 106 3 165 349 241 443 4.53e-26 108
Msa0089400 AT3G46700.1 29.858 211 112 2 176 356 241 445 5.05e-26 108
Msa0089400 AT3G21750.1 30.000 220 100 4 185 355 254 468 7.39e-26 108
Msa0089400 AT3G21760.1 27.490 251 123 7 161 357 237 482 9.69e-26 108
Msa0089400 AT5G38040.1 31.707 205 105 4 180 355 251 449 9.86e-26 107
Msa0089400 AT4G34135.1 32.850 207 107 3 181 355 275 481 1.36e-25 107
Msa0089400 AT3G46650.1 32.673 202 100 2 180 351 233 428 3.96e-25 106
Msa0089400 AT3G46720.1 32.663 199 105 3 174 349 242 434 4.24e-25 106
Msa0089400 AT1G07250.1 31.884 207 107 4 181 355 268 472 5.01e-25 106
Msa0089400 AT5G05880.1 30.500 200 101 5 180 349 251 442 7.39e-25 105
Msa0089400 AT3G21790.1 26.000 350 196 10 62 360 146 483 7.54e-25 105
Msa0089400 AT5G26310.1 28.111 217 106 5 179 348 247 460 1.03e-24 105
Msa0089400 AT4G15280.2 27.679 224 113 5 179 355 284 505 1.17e-24 105
Msa0089400 AT4G15280.1 27.679 224 113 5 179 355 252 473 1.36e-24 105
Msa0089400 AT3G16520.2 34.211 190 86 6 184 339 259 443 1.47e-24 104
Msa0089400 AT3G16520.1 34.211 190 86 6 184 339 259 443 1.60e-24 104
Msa0089400 AT1G07260.1 30.144 209 111 5 179 355 266 471 1.78e-24 104
Msa0089400 AT2G29730.1 27.064 218 127 5 166 355 249 462 2.78e-24 103
Msa0089400 AT5G05860.1 29.952 207 107 4 179 355 249 447 2.81e-24 103
Msa0089400 AT3G46690.1 27.306 271 153 6 111 349 185 443 3.05e-24 103
Msa0089400 AT3G21800.1 26.840 231 116 4 175 357 252 477 3.37e-24 103
Msa0089400 AT1G73880.1 30.180 222 120 6 164 355 250 466 3.48e-24 103
Msa0089400 AT2G29710.1 28.141 199 113 4 186 355 265 462 4.16e-24 103
Msa0089400 AT1G10400.1 27.796 313 158 11 91 349 158 456 8.06e-24 102
Msa0089400 AT1G01390.2 32.287 223 98 7 158 329 245 465 8.60e-24 102
Msa0089400 AT1G01390.1 32.287 223 98 7 158 329 228 448 9.01e-24 102
Msa0089400 AT4G15260.1 27.753 227 108 6 180 355 133 354 9.07e-24 101
Msa0089400 AT2G18560.1 30.732 205 101 5 184 348 166 369 1.28e-23 101
Msa0089400 AT5G14860.1 32.673 202 106 6 186 357 276 477 4.76e-23 100
Msa0089400 AT5G38010.1 31.658 199 101 4 180 349 255 447 5.02e-23 100
Msa0089400 AT2G16890.2 31.841 201 108 5 186 357 269 469 4.14e-22 97.8
Msa0089400 AT2G29740.1 28.986 207 112 4 170 344 260 463 1.21e-21 96.3
Msa0089400 AT5G05890.1 27.536 207 114 4 179 355 252 452 1.32e-21 96.3
Msa0089400 AT3G21780.1 26.496 234 119 6 171 357 243 470 1.73e-21 95.9
Msa0089400 AT2G29750.1 30.275 218 116 7 170 355 260 473 2.72e-21 95.5
Msa0089400 AT5G05900.1 31.188 202 102 7 180 355 257 447 7.75e-21 94.0
Msa0089400 AT2G18570.1 29.187 209 107 6 180 348 252 459 8.53e-21 94.0
Msa0089400 AT5G12890.1 27.985 268 127 10 142 362 240 488 9.28e-20 90.9
Msa0089400 AT1G07240.1 28.019 207 111 5 185 355 271 475 9.79e-20 90.9
Msa0089400 AT3G53150.1 27.039 233 117 8 174 355 279 509 4.85e-19 89.0
Msa0089400 AT1G51210.1 28.821 229 125 7 129 327 209 429 5.02e-19 88.6
Msa0089400 AT2G26480.1 27.363 201 109 3 180 349 245 439 5.22e-19 88.6
Msa0089400 AT2G23210.1 34.615 156 88 3 8 159 10 155 3.79e-17 81.3
Msa0089400 AT5G65550.1 30.481 187 92 5 179 332 258 439 1.22e-16 81.3
Msa0089400 AT3G29630.2 24.703 421 236 13 1 349 1 412 2.81e-15 77.0
Msa0089400 AT2G16890.3 40.860 93 53 2 217 307 326 418 3.43e-14 73.9
Msa0089400 AT4G27570.1 32.051 156 81 5 212 356 303 444 4.21e-14 73.6
Msa0089400 AT1G64910.1 22.958 453 221 16 7 351 5 437 5.16e-14 73.6
Msa0089400 AT5G53990.1 23.298 382 189 10 7 292 5 378 5.91e-14 73.2
Msa0089400 AT4G27560.1 31.410 156 82 5 212 356 303 444 1.57e-13 72.0
Msa0089400 AT3G29630.1 23.318 446 237 14 1 349 1 438 2.80e-13 71.2
Msa0089400 AT5G37950.2 31.092 119 53 2 180 269 221 339 4.14e-13 70.1
Msa0089400 AT5G37950.1 31.092 119 53 2 180 269 227 345 4.58e-13 70.1
Msa0089400 AT5G54010.1 22.340 470 240 17 1 364 1 451 4.71e-13 70.5
Msa0089400 AT5G54060.1 27.586 203 106 7 187 355 267 462 4.88e-13 70.5
Msa0089400 AT5G49690.1 28.333 180 98 5 177 327 250 427 3.59e-12 67.8
Msa0089400 AT1G50580.1 26.147 218 123 6 161 346 222 433 4.50e-12 67.4

Find 83 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGGAATCTTGATGTATTTA+TGG 0.173666 1_2:+70870946 Msa0089400:CDS
GCAATTTCGTTCACTTGTTC+TGG 0.241533 1_2:-70870473 None:intergenic
TCTGTAGTTTACATCTCTTT+TGG 0.250780 1_2:+70870431 Msa0089400:CDS
TAGATTGGGTTATAGTCTTA+TGG 0.268538 1_2:+70870781 Msa0089400:CDS
TGAGGTGAAGAAGTGCTTAA+TGG 0.285517 1_2:+70870826 Msa0089400:CDS
TTGTATATGATACATGAAAT+TGG 0.292427 1_2:-70869938 None:intergenic
TCATTTGCCTGATGGGTTCT+TGG 0.320489 1_2:+70870550 Msa0089400:CDS
GGCAAATGAACATCAATATA+AGG 0.345702 1_2:-70870100 None:intergenic
AGCGTGATTCTTGATCATTT+TGG 0.347200 1_2:-70869903 None:intergenic
TGCTTAATGGAAGCAACAAC+AGG 0.375385 1_2:+70870839 Msa0089400:CDS
AGCAATTGCTTCAGGAGTTC+CGG 0.375701 1_2:+70870685 Msa0089400:CDS
GTGTTGGCATTTCCAGCATT+TGG 0.378550 1_2:+70870707 Msa0089400:CDS
ACGATGGAAGCAATTGCTTC+AGG 0.385251 1_2:+70870677 Msa0089400:CDS
ATATTCTTTCTGCTTTATCA+TGG 0.395852 1_2:+70870002 Msa0089400:CDS
CGTTCACTTGTTCTGGAGGA+TGG 0.398818 1_2:-70870466 None:intergenic
CATGCAGAGCTTGAGCTTGT+AGG 0.410791 1_2:+70869866 Msa0089400:CDS
GATCATTGTTTACTAGATGA+TGG 0.421522 1_2:+70869833 Msa0089400:CDS
TATCGGAGTTGCTAATTTGT+TGG 0.423423 1_2:-70869780 None:intergenic
ATGTAAACTACAGAACCTTT+TGG 0.447088 1_2:-70870422 None:intergenic
AGAAACAAGTAGGATATGAA+TGG 0.448257 1_2:-70869642 None:intergenic
CTCAAGCTCTGCATGGTCAA+TGG 0.450170 1_2:-70869858 None:intergenic
AGAGAGGAAAAGTGGTGAAG+TGG 0.450550 1_2:+70870585 Msa0089400:CDS
ACCAGGATCATTTGCCTGAT+GGG 0.452429 1_2:+70870543 Msa0089400:intron
TTTGGTGTAGGGATTAGATT+GGG 0.453004 1_2:+70870767 Msa0089400:CDS
TCACAAACCCATGGAAGAAA+AGG 0.453406 1_2:-70869962 None:intergenic
AACAAGTGAGAGAGGAAAAG+TGG 0.460758 1_2:+70870577 Msa0089400:CDS
AAGGAAAAGGTACAAGTTTG+TGG 0.460785 1_2:-70870066 None:intergenic
GGTTCTGTTTCTGAAGGAAA+AGG 0.477403 1_2:-70870079 None:intergenic
GGGTTTATGTGTCCTTGTGC+TGG 0.479514 1_2:-70869668 None:intergenic
ATGCAGAGCTTGAGCTTGTA+GGG 0.480677 1_2:+70869867 Msa0089400:CDS
AGGTAAATGTCTTGCTGCAA+AGG 0.484815 1_2:+70869703 Msa0089400:CDS
GTGGACATAGTTATAGTAAG+TGG 0.487941 1_2:-70870047 None:intergenic
CACCAGGATCATTTGCCTGA+TGG 0.491773 1_2:+70870542 Msa0089400:intron
GTTTCCTCCAAGAACCCATC+AGG 0.494180 1_2:-70870557 None:intergenic
TTTGCCTGATGGGTTCTTGG+AGG 0.509956 1_2:+70870553 Msa0089400:CDS
GAAACAAGTAGGATATGAAT+GGG 0.518772 1_2:-70869641 None:intergenic
TGCTTCAGGAGTTCCGGTGT+TGG 0.525248 1_2:+70870691 Msa0089400:CDS
GTTTCGTGACACATTGTGGC+TGG 0.529753 1_2:+70870648 Msa0089400:CDS
GTAAGGTGGTCACCAAATGC+TGG 0.531415 1_2:-70870719 None:intergenic
TAGTCTTATGGAAAACAAGT+TGG 0.533092 1_2:+70870793 Msa0089400:CDS
GCGGAGGAAGCAGTGGCTGT+CGG 0.537675 1_2:+70870911 Msa0089400:CDS
GGAAGTACTTGATCATCCTT+CGG 0.539328 1_2:+70870619 Msa0089400:CDS
GGTAAATGTCTTGCTGCAAA+GGG 0.541648 1_2:+70869704 Msa0089400:CDS
CTGTCGGTGGATCCTCTGAT+CGG 0.544615 1_2:+70870927 Msa0089400:CDS
ATATAAGGTTCTGTTTCTGA+AGG 0.547175 1_2:-70870085 None:intergenic
TGGCTAAACACAAAGCCAAA+AGG 0.552067 1_2:+70870407 Msa0089400:CDS
AAAGCAGCAAGCAATATTCG+AGG 0.558686 1_2:+70870344 Msa0089400:CDS
GAAGTGGAAGAAGGCGGCGG+AGG 0.562698 1_2:+70870895 Msa0089400:CDS
ATTTCGTTCACTTGTTCTGG+AGG 0.563496 1_2:-70870470 None:intergenic
AAATGCAATGAAGTGGAAGA+AGG 0.563659 1_2:+70870886 Msa0089400:CDS
AGTGGTGAAGTGGAGTCCAC+AGG 0.575366 1_2:+70870595 Msa0089400:CDS
GAGGAAGCAGTGGCTGTCGG+TGG 0.576801 1_2:+70870914 Msa0089400:CDS
GAAGGCGGCGGAGGAAGCAG+TGG 0.579163 1_2:+70870904 Msa0089400:CDS
ATTTACCTAGTCTTAGAAGA+GGG 0.580935 1_2:-70869688 None:intergenic
GTGCTGGAAAAGAAACAAGT+AGG 0.583730 1_2:-70869652 None:intergenic
GTGAGGCAACCATCACCTAT+CGG 0.585202 1_2:-70869797 None:intergenic
TAGGATATGAATGGGAACTT+CGG 0.587819 1_2:-70869633 None:intergenic
GATCAAAGAACTCGAAAGTG+AGG 0.602091 1_2:-70869814 None:intergenic
TACATCAAGATTCCGATCAG+AGG 0.604344 1_2:-70870939 None:intergenic
TTAGCAACTCCGATAGGTGA+TGG 0.605196 1_2:+70869788 Msa0089400:CDS
GCATGTTTCGTGACACATTG+TGG 0.605378 1_2:+70870644 Msa0089400:CDS
ATAAACCCTCTTCTAAGACT+AGG 0.608462 1_2:+70869683 Msa0089400:CDS
CATTTACCTAGTCTTAGAAG+AGG 0.611142 1_2:-70869689 None:intergenic
TTCACTACAACAGAGAAAGC+AGG 0.611938 1_2:+70869740 Msa0089400:CDS
ATGATTGTAGTATTATAGAG+TGG 0.612349 1_2:+70870387 Msa0089400:CDS
TTGGAGGAAACAAGTGAGAG+AGG 0.616997 1_2:+70870569 Msa0089400:CDS
CTACAAGCTCAAGCTCTGCA+TGG 0.617772 1_2:-70869865 None:intergenic
AAAGCTACATCACAAACCCA+TGG 0.623753 1_2:-70869971 None:intergenic
CAAGTTGGTAACAAGAGATG+AGG 0.627979 1_2:+70870808 Msa0089400:CDS
GCTTAATGGAAGCAACAACA+GGG 0.628663 1_2:+70870840 Msa0089400:CDS
CAGAGCTTGAGCTTGTAGGG+AGG 0.629545 1_2:+70869870 Msa0089400:CDS
AACAAATTAGCAACTCCGAT+AGG 0.633930 1_2:+70869782 Msa0089400:CDS
GTCACGAAACATGCCACCGA+AGG 0.638096 1_2:-70870635 None:intergenic
AATGAAGTGGAAGAAGGCGG+CGG 0.640843 1_2:+70870892 Msa0089400:CDS
AATGCTGGAAATGCCAACAC+CGG 0.644155 1_2:-70870704 None:intergenic
GGTGAAGTGGAGTCCACAGG+AGG 0.648818 1_2:+70870598 Msa0089400:CDS
TGATCAAGTACTTCCTCCTG+TGG 0.652031 1_2:-70870611 None:intergenic
TGCAATGAAGTGGAAGAAGG+CGG 0.681223 1_2:+70870889 Msa0089400:CDS
AGTACTTGATCATCCTTCGG+TGG 0.685899 1_2:+70870622 Msa0089400:CDS
TGCTGTTGTAAACATTCACA+AGG 0.692223 1_2:+70870985 Msa0089400:CDS
TTGTGGCTGGAATTCAACGA+TGG 0.703619 1_2:+70870661 Msa0089400:CDS
CTTAATGGAAGCAACAACAG+GGG 0.717351 1_2:+70870841 Msa0089400:CDS
TGTTGTAGTGAAGATGACAG+AGG 0.746723 1_2:-70869729 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTTGATAGATGTTTT+TGG + chr1_2:70870749-70870768 Msa0089400:CDS 15.0%
!!! AAATTTTTGATAGATGTTTT+TGG + chr1_2:70870749-70870768 Msa0089400:CDS 15.0%
!! TTGTATATGATACATGAAAT+TGG - chr1_2:70869941-70869960 None:intergenic 20.0%
!! TAAAAGGATGTATTAAATCT+GGG - chr1_2:70870153-70870172 None:intergenic 20.0%
!! TTAAAAGGATGTATTAAATC+TGG - chr1_2:70870154-70870173 None:intergenic 20.0%
!!! TCAAAAATTTTGCATTTGTA+AGG - chr1_2:70870739-70870758 None:intergenic 20.0%
!! TTGTATATGATACATGAAAT+TGG - chr1_2:70869941-70869960 None:intergenic 20.0%
!! TAAAAGGATGTATTAAATCT+GGG - chr1_2:70870153-70870172 None:intergenic 20.0%
!! TTAAAAGGATGTATTAAATC+TGG - chr1_2:70870154-70870173 None:intergenic 20.0%
!!! TCAAAAATTTTGCATTTGTA+AGG - chr1_2:70870739-70870758 None:intergenic 20.0%
! ATATTCTTTCTGCTTTATCA+TGG + chr1_2:70870002-70870021 Msa0089400:CDS 25.0%
! TTGTATTGAAGGACTATAAA+AGG - chr1_2:70870124-70870143 None:intergenic 25.0%
!! TCTAAAATGTTGTGTATTAG+TGG + chr1_2:70870223-70870242 Msa0089400:intron 25.0%
! ATGATTGTAGTATTATAGAG+TGG + chr1_2:70870387-70870406 Msa0089400:CDS 25.0%
!! ATTCTAAACTCTGATTTTTG+TGG + chr1_2:70870510-70870529 Msa0089400:intron 25.0%
!! TTCTAAACTCTGATTTTTGT+GGG + chr1_2:70870511-70870530 Msa0089400:intron 25.0%
!! AAAATTTTGCATTTGTAAGG+TGG - chr1_2:70870736-70870755 None:intergenic 25.0%
! ATATTCTTTCTGCTTTATCA+TGG + chr1_2:70870002-70870021 Msa0089400:CDS 25.0%
! TTGTATTGAAGGACTATAAA+AGG - chr1_2:70870124-70870143 None:intergenic 25.0%
!! TCTAAAATGTTGTGTATTAG+TGG + chr1_2:70870223-70870242 Msa0089400:intron 25.0%
! ATGATTGTAGTATTATAGAG+TGG + chr1_2:70870387-70870406 Msa0089400:CDS 25.0%
!! ATTCTAAACTCTGATTTTTG+TGG + chr1_2:70870510-70870529 Msa0089400:intron 25.0%
!! TTCTAAACTCTGATTTTTGT+GGG + chr1_2:70870511-70870530 Msa0089400:intron 25.0%
!! AAAATTTTGCATTTGTAAGG+TGG - chr1_2:70870736-70870755 None:intergenic 25.0%
GAAACAAGTAGGATATGAAT+GGG - chr1_2:70869644-70869663 None:intergenic 30.0%
AGAAACAAGTAGGATATGAA+TGG - chr1_2:70869645-70869664 None:intergenic 30.0%
!! ATTTACCTAGTCTTAGAAGA+GGG - chr1_2:70869691-70869710 None:intergenic 30.0%
GATCATTGTTTACTAGATGA+TGG + chr1_2:70869833-70869852 Msa0089400:CDS 30.0%
! TATACAATCCTTTTCTTCCA+TGG + chr1_2:70869954-70869973 Msa0089400:CDS 30.0%
! ATACAATCCTTTTCTTCCAT+GGG + chr1_2:70869955-70869974 Msa0089400:CDS 30.0%
!! ATATAAGGTTCTGTTTCTGA+AGG - chr1_2:70870088-70870107 None:intergenic 30.0%
GGCAAATGAACATCAATATA+AGG - chr1_2:70870103-70870122 None:intergenic 30.0%
AGAATTGGATAGGGATTAAA+AGG - chr1_2:70870169-70870188 None:intergenic 30.0%
TTTAATCCCTATCCAATTCT+AGG + chr1_2:70870169-70870188 Msa0089400:intron 30.0%
TTAATCCCTATCCAATTCTA+GGG + chr1_2:70870170-70870189 Msa0089400:intron 30.0%
!!! TCTAATGAGGACTGATTTTT+TGG - chr1_2:70870291-70870310 None:intergenic 30.0%
! ATGTAAACTACAGAACCTTT+TGG - chr1_2:70870425-70870444 None:intergenic 30.0%
! TCTGTAGTTTACATCTCTTT+TGG + chr1_2:70870431-70870450 Msa0089400:CDS 30.0%
! CTGTAGTTTACATCTCTTTT+GGG + chr1_2:70870432-70870451 Msa0089400:CDS 30.0%
AAGTGAACGAAATTGCATTT+GGG + chr1_2:70870480-70870499 Msa0089400:intron 30.0%
!!! TTGATAGATGTTTTTGGTGT+AGG + chr1_2:70870755-70870774 Msa0089400:CDS 30.0%
!!! TGATAGATGTTTTTGGTGTA+GGG + chr1_2:70870756-70870775 Msa0089400:CDS 30.0%
! TAGATTGGGTTATAGTCTTA+TGG + chr1_2:70870781-70870800 Msa0089400:CDS 30.0%
!! TAGTCTTATGGAAAACAAGT+TGG + chr1_2:70870793-70870812 Msa0089400:CDS 30.0%
TGAAGAAAAATGCAATGAAG+TGG + chr1_2:70870879-70870898 Msa0089400:CDS 30.0%
TCGGAATCTTGATGTATTTA+TGG + chr1_2:70870946-70870965 Msa0089400:CDS 30.0%
GAAACAAGTAGGATATGAAT+GGG - chr1_2:70869644-70869663 None:intergenic 30.0%
AGAAACAAGTAGGATATGAA+TGG - chr1_2:70869645-70869664 None:intergenic 30.0%
!! ATTTACCTAGTCTTAGAAGA+GGG - chr1_2:70869691-70869710 None:intergenic 30.0%
GATCATTGTTTACTAGATGA+TGG + chr1_2:70869833-70869852 Msa0089400:CDS 30.0%
! TATACAATCCTTTTCTTCCA+TGG + chr1_2:70869954-70869973 Msa0089400:CDS 30.0%
! ATACAATCCTTTTCTTCCAT+GGG + chr1_2:70869955-70869974 Msa0089400:CDS 30.0%
!! ATATAAGGTTCTGTTTCTGA+AGG - chr1_2:70870088-70870107 None:intergenic 30.0%
GGCAAATGAACATCAATATA+AGG - chr1_2:70870103-70870122 None:intergenic 30.0%
AGAATTGGATAGGGATTAAA+AGG - chr1_2:70870169-70870188 None:intergenic 30.0%
TTTAATCCCTATCCAATTCT+AGG + chr1_2:70870169-70870188 Msa0089400:intron 30.0%
TTAATCCCTATCCAATTCTA+GGG + chr1_2:70870170-70870189 Msa0089400:intron 30.0%
!!! TCTAATGAGGACTGATTTTT+TGG - chr1_2:70870291-70870310 None:intergenic 30.0%
! ATGTAAACTACAGAACCTTT+TGG - chr1_2:70870425-70870444 None:intergenic 30.0%
! TCTGTAGTTTACATCTCTTT+TGG + chr1_2:70870431-70870450 Msa0089400:CDS 30.0%
! CTGTAGTTTACATCTCTTTT+GGG + chr1_2:70870432-70870451 Msa0089400:CDS 30.0%
AAGTGAACGAAATTGCATTT+GGG + chr1_2:70870480-70870499 Msa0089400:intron 30.0%
!!! TTGATAGATGTTTTTGGTGT+AGG + chr1_2:70870755-70870774 Msa0089400:CDS 30.0%
!!! TGATAGATGTTTTTGGTGTA+GGG + chr1_2:70870756-70870775 Msa0089400:CDS 30.0%
! TAGATTGGGTTATAGTCTTA+TGG + chr1_2:70870781-70870800 Msa0089400:CDS 30.0%
!! TAGTCTTATGGAAAACAAGT+TGG + chr1_2:70870793-70870812 Msa0089400:CDS 30.0%
TGAAGAAAAATGCAATGAAG+TGG + chr1_2:70870879-70870898 Msa0089400:CDS 30.0%
TCGGAATCTTGATGTATTTA+TGG + chr1_2:70870946-70870965 Msa0089400:CDS 30.0%
TAGGATATGAATGGGAACTT+CGG - chr1_2:70869636-70869655 None:intergenic 35.0%
!! ATAAACCCTCTTCTAAGACT+AGG + chr1_2:70869683-70869702 Msa0089400:CDS 35.0%
!! CATTTACCTAGTCTTAGAAG+AGG - chr1_2:70869692-70869711 None:intergenic 35.0%
! TATCGGAGTTGCTAATTTGT+TGG - chr1_2:70869783-70869802 None:intergenic 35.0%
AACAAATTAGCAACTCCGAT+AGG + chr1_2:70869782-70869801 Msa0089400:CDS 35.0%
! AGCGTGATTCTTGATCATTT+TGG - chr1_2:70869906-70869925 None:intergenic 35.0%
GTGGACATAGTTATAGTAAG+TGG - chr1_2:70870050-70870069 None:intergenic 35.0%
! AAGGAAAAGGTACAAGTTTG+TGG - chr1_2:70870069-70870088 None:intergenic 35.0%
CTGGGATTTCATTGTATTGA+AGG - chr1_2:70870135-70870154 None:intergenic 35.0%
CAAGTTATTCATATGTGACG+TGG - chr1_2:70870203-70870222 None:intergenic 35.0%
!! ATCATGCTCTAGTTCTTCAT+AGG - chr1_2:70870252-70870271 None:intergenic 35.0%
!!! TGCTTGCTGCTTTTATTGTT+GGG - chr1_2:70870337-70870356 None:intergenic 35.0%
!!! TTGCTTGCTGCTTTTATTGT+TGG - chr1_2:70870338-70870357 None:intergenic 35.0%
CAAGTGAACGAAATTGCATT+TGG + chr1_2:70870479-70870498 Msa0089400:intron 35.0%
!! TTTTGGTGTAGGGATTAGAT+TGG + chr1_2:70870766-70870785 Msa0089400:CDS 35.0%
! TTTGGTGTAGGGATTAGATT+GGG + chr1_2:70870767-70870786 Msa0089400:CDS 35.0%
AAATGCAATGAAGTGGAAGA+AGG + chr1_2:70870886-70870905 Msa0089400:CDS 35.0%
TGCTGTTGTAAACATTCACA+AGG + chr1_2:70870985-70871004 Msa0089400:CDS 35.0%
TAGGATATGAATGGGAACTT+CGG - chr1_2:70869636-70869655 None:intergenic 35.0%
!! ATAAACCCTCTTCTAAGACT+AGG + chr1_2:70869683-70869702 Msa0089400:CDS 35.0%
!! CATTTACCTAGTCTTAGAAG+AGG - chr1_2:70869692-70869711 None:intergenic 35.0%
! TATCGGAGTTGCTAATTTGT+TGG - chr1_2:70869783-70869802 None:intergenic 35.0%
AACAAATTAGCAACTCCGAT+AGG + chr1_2:70869782-70869801 Msa0089400:CDS 35.0%
! AGCGTGATTCTTGATCATTT+TGG - chr1_2:70869906-70869925 None:intergenic 35.0%
GTGGACATAGTTATAGTAAG+TGG - chr1_2:70870050-70870069 None:intergenic 35.0%
! AAGGAAAAGGTACAAGTTTG+TGG - chr1_2:70870069-70870088 None:intergenic 35.0%
CTGGGATTTCATTGTATTGA+AGG - chr1_2:70870135-70870154 None:intergenic 35.0%
CAAGTTATTCATATGTGACG+TGG - chr1_2:70870203-70870222 None:intergenic 35.0%
!! ATCATGCTCTAGTTCTTCAT+AGG - chr1_2:70870252-70870271 None:intergenic 35.0%
!!! TGCTTGCTGCTTTTATTGTT+GGG - chr1_2:70870337-70870356 None:intergenic 35.0%
!!! TTGCTTGCTGCTTTTATTGT+TGG - chr1_2:70870338-70870357 None:intergenic 35.0%
CAAGTGAACGAAATTGCATT+TGG + chr1_2:70870479-70870498 Msa0089400:intron 35.0%
!! TTTTGGTGTAGGGATTAGAT+TGG + chr1_2:70870766-70870785 Msa0089400:CDS 35.0%
! TTTGGTGTAGGGATTAGATT+GGG + chr1_2:70870767-70870786 Msa0089400:CDS 35.0%
AAATGCAATGAAGTGGAAGA+AGG + chr1_2:70870886-70870905 Msa0089400:CDS 35.0%
TGCTGTTGTAAACATTCACA+AGG + chr1_2:70870985-70871004 Msa0089400:CDS 35.0%
GTGCTGGAAAAGAAACAAGT+AGG - chr1_2:70869655-70869674 None:intergenic 40.0%
!! CTTGTTTCTTTTCCAGCACA+AGG + chr1_2:70869656-70869675 Msa0089400:CDS 40.0%
AGGTAAATGTCTTGCTGCAA+AGG + chr1_2:70869703-70869722 Msa0089400:CDS 40.0%
GGTAAATGTCTTGCTGCAAA+GGG + chr1_2:70869704-70869723 Msa0089400:CDS 40.0%
TGTTGTAGTGAAGATGACAG+AGG - chr1_2:70869732-70869751 None:intergenic 40.0%
TTCACTACAACAGAGAAAGC+AGG + chr1_2:70869740-70869759 Msa0089400:CDS 40.0%
GATCAAAGAACTCGAAAGTG+AGG - chr1_2:70869817-70869836 None:intergenic 40.0%
TCACAAACCCATGGAAGAAA+AGG - chr1_2:70869965-70869984 None:intergenic 40.0%
AAAGCTACATCACAAACCCA+TGG - chr1_2:70869974-70869993 None:intergenic 40.0%
!! GGTTCTGTTTCTGAAGGAAA+AGG - chr1_2:70870082-70870101 None:intergenic 40.0%
AGTGTCCCTAGAATTGGATA+GGG - chr1_2:70870178-70870197 None:intergenic 40.0%
TTCTTGAACAGAGGACCAAT+GGG - chr1_2:70870314-70870333 None:intergenic 40.0%
ATTGTTGGGTTCTTGAACAG+AGG - chr1_2:70870323-70870342 None:intergenic 40.0%
AAAGCAGCAAGCAATATTCG+AGG + chr1_2:70870344-70870363 Msa0089400:CDS 40.0%
TGGCTAAACACAAAGCCAAA+AGG + chr1_2:70870407-70870426 Msa0089400:CDS 40.0%
ATTTCGTTCACTTGTTCTGG+AGG - chr1_2:70870473-70870492 None:intergenic 40.0%
GCAATTTCGTTCACTTGTTC+TGG - chr1_2:70870476-70870495 None:intergenic 40.0%
TTTGTGGGCAAAAAAACACC+AGG + chr1_2:70870526-70870545 Msa0089400:intron 40.0%
AACAAGTGAGAGAGGAAAAG+TGG + chr1_2:70870577-70870596 Msa0089400:CDS 40.0%
!! GGAAGTACTTGATCATCCTT+CGG + chr1_2:70870619-70870638 Msa0089400:CDS 40.0%
!! CAAGTTGGTAACAAGAGATG+AGG + chr1_2:70870808-70870827 Msa0089400:CDS 40.0%
!! TGAGGTGAAGAAGTGCTTAA+TGG + chr1_2:70870826-70870845 Msa0089400:CDS 40.0%
TGCTTAATGGAAGCAACAAC+AGG + chr1_2:70870839-70870858 Msa0089400:CDS 40.0%
GCTTAATGGAAGCAACAACA+GGG + chr1_2:70870840-70870859 Msa0089400:CDS 40.0%
CTTAATGGAAGCAACAACAG+GGG + chr1_2:70870841-70870860 Msa0089400:CDS 40.0%
TACATCAAGATTCCGATCAG+AGG - chr1_2:70870942-70870961 None:intergenic 40.0%
GTGCTGGAAAAGAAACAAGT+AGG - chr1_2:70869655-70869674 None:intergenic 40.0%
!! CTTGTTTCTTTTCCAGCACA+AGG + chr1_2:70869656-70869675 Msa0089400:CDS 40.0%
AGGTAAATGTCTTGCTGCAA+AGG + chr1_2:70869703-70869722 Msa0089400:CDS 40.0%
GGTAAATGTCTTGCTGCAAA+GGG + chr1_2:70869704-70869723 Msa0089400:CDS 40.0%
TGTTGTAGTGAAGATGACAG+AGG - chr1_2:70869732-70869751 None:intergenic 40.0%
TTCACTACAACAGAGAAAGC+AGG + chr1_2:70869740-70869759 Msa0089400:CDS 40.0%
GATCAAAGAACTCGAAAGTG+AGG - chr1_2:70869817-70869836 None:intergenic 40.0%
TCACAAACCCATGGAAGAAA+AGG - chr1_2:70869965-70869984 None:intergenic 40.0%
AAAGCTACATCACAAACCCA+TGG - chr1_2:70869974-70869993 None:intergenic 40.0%
!! GGTTCTGTTTCTGAAGGAAA+AGG - chr1_2:70870082-70870101 None:intergenic 40.0%
AGTGTCCCTAGAATTGGATA+GGG - chr1_2:70870178-70870197 None:intergenic 40.0%
TTCTTGAACAGAGGACCAAT+GGG - chr1_2:70870314-70870333 None:intergenic 40.0%
ATTGTTGGGTTCTTGAACAG+AGG - chr1_2:70870323-70870342 None:intergenic 40.0%
AAAGCAGCAAGCAATATTCG+AGG + chr1_2:70870344-70870363 Msa0089400:CDS 40.0%
TGGCTAAACACAAAGCCAAA+AGG + chr1_2:70870407-70870426 Msa0089400:CDS 40.0%
ATTTCGTTCACTTGTTCTGG+AGG - chr1_2:70870473-70870492 None:intergenic 40.0%
GCAATTTCGTTCACTTGTTC+TGG - chr1_2:70870476-70870495 None:intergenic 40.0%
TTTGTGGGCAAAAAAACACC+AGG + chr1_2:70870526-70870545 Msa0089400:intron 40.0%
AACAAGTGAGAGAGGAAAAG+TGG + chr1_2:70870577-70870596 Msa0089400:CDS 40.0%
!! GGAAGTACTTGATCATCCTT+CGG + chr1_2:70870619-70870638 Msa0089400:CDS 40.0%
!! CAAGTTGGTAACAAGAGATG+AGG + chr1_2:70870808-70870827 Msa0089400:CDS 40.0%
!! TGAGGTGAAGAAGTGCTTAA+TGG + chr1_2:70870826-70870845 Msa0089400:CDS 40.0%
TGCTTAATGGAAGCAACAAC+AGG + chr1_2:70870839-70870858 Msa0089400:CDS 40.0%
GCTTAATGGAAGCAACAACA+GGG + chr1_2:70870840-70870859 Msa0089400:CDS 40.0%
CTTAATGGAAGCAACAACAG+GGG + chr1_2:70870841-70870860 Msa0089400:CDS 40.0%
TACATCAAGATTCCGATCAG+AGG - chr1_2:70870942-70870961 None:intergenic 40.0%
TTAGCAACTCCGATAGGTGA+TGG + chr1_2:70869788-70869807 Msa0089400:CDS 45.0%
ATGCAGAGCTTGAGCTTGTA+GGG + chr1_2:70869867-70869886 Msa0089400:CDS 45.0%
GAGTGTCCCTAGAATTGGAT+AGG - chr1_2:70870179-70870198 None:intergenic 45.0%
TCAGTCCTCATTAGACCCAT+TGG + chr1_2:70870296-70870315 Msa0089400:intron 45.0%
GTTCTTGAACAGAGGACCAA+TGG - chr1_2:70870315-70870334 None:intergenic 45.0%
ACCAGGATCATTTGCCTGAT+GGG + chr1_2:70870543-70870562 Msa0089400:intron 45.0%
!! TCATTTGCCTGATGGGTTCT+TGG + chr1_2:70870550-70870569 Msa0089400:CDS 45.0%
TTGGAGGAAACAAGTGAGAG+AGG + chr1_2:70870569-70870588 Msa0089400:CDS 45.0%
AGAGAGGAAAAGTGGTGAAG+TGG + chr1_2:70870585-70870604 Msa0089400:CDS 45.0%
TGATCAAGTACTTCCTCCTG+TGG - chr1_2:70870614-70870633 None:intergenic 45.0%
AGTACTTGATCATCCTTCGG+TGG + chr1_2:70870622-70870641 Msa0089400:CDS 45.0%
GCATGTTTCGTGACACATTG+TGG + chr1_2:70870644-70870663 Msa0089400:CDS 45.0%
TTGTGGCTGGAATTCAACGA+TGG + chr1_2:70870661-70870680 Msa0089400:CDS 45.0%
ACGATGGAAGCAATTGCTTC+AGG + chr1_2:70870677-70870696 Msa0089400:CDS 45.0%
AGCAATTGCTTCAGGAGTTC+CGG + chr1_2:70870685-70870704 Msa0089400:CDS 45.0%
AATGCTGGAAATGCCAACAC+CGG - chr1_2:70870707-70870726 None:intergenic 45.0%
! GTGTTGGCATTTCCAGCATT+TGG + chr1_2:70870707-70870726 Msa0089400:CDS 45.0%
AACAACAGGGGAAAAAGCAG+AGG + chr1_2:70870853-70870872 Msa0089400:CDS 45.0%
TGCAATGAAGTGGAAGAAGG+CGG + chr1_2:70870889-70870908 Msa0089400:CDS 45.0%
TTAGCAACTCCGATAGGTGA+TGG + chr1_2:70869788-70869807 Msa0089400:CDS 45.0%
ATGCAGAGCTTGAGCTTGTA+GGG + chr1_2:70869867-70869886 Msa0089400:CDS 45.0%
GAGTGTCCCTAGAATTGGAT+AGG - chr1_2:70870179-70870198 None:intergenic 45.0%
TCAGTCCTCATTAGACCCAT+TGG + chr1_2:70870296-70870315 Msa0089400:intron 45.0%
GTTCTTGAACAGAGGACCAA+TGG - chr1_2:70870315-70870334 None:intergenic 45.0%
ACCAGGATCATTTGCCTGAT+GGG + chr1_2:70870543-70870562 Msa0089400:intron 45.0%
!! TCATTTGCCTGATGGGTTCT+TGG + chr1_2:70870550-70870569 Msa0089400:CDS 45.0%
TTGGAGGAAACAAGTGAGAG+AGG + chr1_2:70870569-70870588 Msa0089400:CDS 45.0%
AGAGAGGAAAAGTGGTGAAG+TGG + chr1_2:70870585-70870604 Msa0089400:CDS 45.0%
TGATCAAGTACTTCCTCCTG+TGG - chr1_2:70870614-70870633 None:intergenic 45.0%
AGTACTTGATCATCCTTCGG+TGG + chr1_2:70870622-70870641 Msa0089400:CDS 45.0%
GCATGTTTCGTGACACATTG+TGG + chr1_2:70870644-70870663 Msa0089400:CDS 45.0%
TTGTGGCTGGAATTCAACGA+TGG + chr1_2:70870661-70870680 Msa0089400:CDS 45.0%
ACGATGGAAGCAATTGCTTC+AGG + chr1_2:70870677-70870696 Msa0089400:CDS 45.0%
AGCAATTGCTTCAGGAGTTC+CGG + chr1_2:70870685-70870704 Msa0089400:CDS 45.0%
AATGCTGGAAATGCCAACAC+CGG - chr1_2:70870707-70870726 None:intergenic 45.0%
! GTGTTGGCATTTCCAGCATT+TGG + chr1_2:70870707-70870726 Msa0089400:CDS 45.0%
AACAACAGGGGAAAAAGCAG+AGG + chr1_2:70870853-70870872 Msa0089400:CDS 45.0%
TGCAATGAAGTGGAAGAAGG+CGG + chr1_2:70870889-70870908 Msa0089400:CDS 45.0%
GGGTTTATGTGTCCTTGTGC+TGG - chr1_2:70869671-70869690 None:intergenic 50.0%
GTGAGGCAACCATCACCTAT+CGG - chr1_2:70869800-70869819 None:intergenic 50.0%
CTCAAGCTCTGCATGGTCAA+TGG - chr1_2:70869861-70869880 None:intergenic 50.0%
CTACAAGCTCAAGCTCTGCA+TGG - chr1_2:70869868-70869887 None:intergenic 50.0%
CATGCAGAGCTTGAGCTTGT+AGG + chr1_2:70869866-70869885 Msa0089400:CDS 50.0%
GTGGTGAGTGTCCCTAGAAT+TGG - chr1_2:70870184-70870203 None:intergenic 50.0%
GAGGACCAATGGGTCTAATG+AGG - chr1_2:70870304-70870323 None:intergenic 50.0%
!! CGTTCACTTGTTCTGGAGGA+TGG - chr1_2:70870469-70870488 None:intergenic 50.0%
CACCAGGATCATTTGCCTGA+TGG + chr1_2:70870542-70870561 Msa0089400:intron 50.0%
ACCCATCAGGCAAATGATCC+TGG - chr1_2:70870547-70870566 None:intergenic 50.0%
!! TTTGCCTGATGGGTTCTTGG+AGG + chr1_2:70870553-70870572 Msa0089400:CDS 50.0%
GTTTCCTCCAAGAACCCATC+AGG - chr1_2:70870560-70870579 None:intergenic 50.0%
GTTTCGTGACACATTGTGGC+TGG + chr1_2:70870648-70870667 Msa0089400:CDS 50.0%
GTAAGGTGGTCACCAAATGC+TGG - chr1_2:70870722-70870741 None:intergenic 50.0%
AATGAAGTGGAAGAAGGCGG+CGG + chr1_2:70870892-70870911 Msa0089400:CDS 50.0%
GGGTTTATGTGTCCTTGTGC+TGG - chr1_2:70869671-70869690 None:intergenic 50.0%
GTGAGGCAACCATCACCTAT+CGG - chr1_2:70869800-70869819 None:intergenic 50.0%
CTCAAGCTCTGCATGGTCAA+TGG - chr1_2:70869861-70869880 None:intergenic 50.0%
CTACAAGCTCAAGCTCTGCA+TGG - chr1_2:70869868-70869887 None:intergenic 50.0%
CATGCAGAGCTTGAGCTTGT+AGG + chr1_2:70869866-70869885 Msa0089400:CDS 50.0%
GTGGTGAGTGTCCCTAGAAT+TGG - chr1_2:70870184-70870203 None:intergenic 50.0%
GAGGACCAATGGGTCTAATG+AGG - chr1_2:70870304-70870323 None:intergenic 50.0%
!! CGTTCACTTGTTCTGGAGGA+TGG - chr1_2:70870469-70870488 None:intergenic 50.0%
CACCAGGATCATTTGCCTGA+TGG + chr1_2:70870542-70870561 Msa0089400:intron 50.0%
ACCCATCAGGCAAATGATCC+TGG - chr1_2:70870547-70870566 None:intergenic 50.0%
!! TTTGCCTGATGGGTTCTTGG+AGG + chr1_2:70870553-70870572 Msa0089400:CDS 50.0%
GTTTCCTCCAAGAACCCATC+AGG - chr1_2:70870560-70870579 None:intergenic 50.0%
GTTTCGTGACACATTGTGGC+TGG + chr1_2:70870648-70870667 Msa0089400:CDS 50.0%
GTAAGGTGGTCACCAAATGC+TGG - chr1_2:70870722-70870741 None:intergenic 50.0%
AATGAAGTGGAAGAAGGCGG+CGG + chr1_2:70870892-70870911 Msa0089400:CDS 50.0%
CAGAGCTTGAGCTTGTAGGG+AGG + chr1_2:70869870-70869889 Msa0089400:CDS 55.0%
AGTGGTGAAGTGGAGTCCAC+AGG + chr1_2:70870595-70870614 Msa0089400:CDS 55.0%
GTCACGAAACATGCCACCGA+AGG - chr1_2:70870638-70870657 None:intergenic 55.0%
TGCTTCAGGAGTTCCGGTGT+TGG + chr1_2:70870691-70870710 Msa0089400:CDS 55.0%
CTGTCGGTGGATCCTCTGAT+CGG + chr1_2:70870927-70870946 Msa0089400:CDS 55.0%
CAGAGCTTGAGCTTGTAGGG+AGG + chr1_2:70869870-70869889 Msa0089400:CDS 55.0%
AGTGGTGAAGTGGAGTCCAC+AGG + chr1_2:70870595-70870614 Msa0089400:CDS 55.0%
GTCACGAAACATGCCACCGA+AGG - chr1_2:70870638-70870657 None:intergenic 55.0%
TGCTTCAGGAGTTCCGGTGT+TGG + chr1_2:70870691-70870710 Msa0089400:CDS 55.0%
CTGTCGGTGGATCCTCTGAT+CGG + chr1_2:70870927-70870946 Msa0089400:CDS 55.0%
GGTGAAGTGGAGTCCACAGG+AGG + chr1_2:70870598-70870617 Msa0089400:CDS 60.0%
GGTGAAGTGGAGTCCACAGG+AGG + chr1_2:70870598-70870617 Msa0089400:CDS 60.0%
GAAGTGGAAGAAGGCGGCGG+AGG + chr1_2:70870895-70870914 Msa0089400:CDS 65.0%
GCGGAGGAAGCAGTGGCTGT+CGG + chr1_2:70870911-70870930 Msa0089400:CDS 65.0%
GAGGAAGCAGTGGCTGTCGG+TGG + chr1_2:70870914-70870933 Msa0089400:CDS 65.0%
GAAGTGGAAGAAGGCGGCGG+AGG + chr1_2:70870895-70870914 Msa0089400:CDS 65.0%
GCGGAGGAAGCAGTGGCTGT+CGG + chr1_2:70870911-70870930 Msa0089400:CDS 65.0%
GAGGAAGCAGTGGCTGTCGG+TGG + chr1_2:70870914-70870933 Msa0089400:CDS 65.0%
GAAGGCGGCGGAGGAAGCAG+TGG + chr1_2:70870904-70870923 Msa0089400:CDS 70.0%
GAAGGCGGCGGAGGAAGCAG+TGG + chr1_2:70870904-70870923 Msa0089400:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 70869626 70871012 70869626 ID=Msa0089400;Name=Msa0089400
chr1_2 mRNA 70869626 70871012 70869626 ID=Msa0089400-mRNA-1;Parent=Msa0089400;Name=Msa0089400-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|0|0|1|1|1|3|0|366
chr1_2 exon 70869626 70870111 70869626 ID=Msa0089400-mRNA-1:exon:24425;Parent=Msa0089400-mRNA-1
chr1_2 exon 70870332 70870481 70870332 ID=Msa0089400-mRNA-1:exon:24426;Parent=Msa0089400-mRNA-1
chr1_2 exon 70870548 70871012 70870548 ID=Msa0089400-mRNA-1:exon:24427;Parent=Msa0089400-mRNA-1
chr1_2 CDS 70869626 70870111 70869626 ID=Msa0089400-mRNA-1:cds;Parent=Msa0089400-mRNA-1
chr1_2 CDS 70870332 70870481 70870332 ID=Msa0089400-mRNA-1:cds;Parent=Msa0089400-mRNA-1
chr1_2 CDS 70870548 70871012 70870548 ID=Msa0089400-mRNA-1:cds;Parent=Msa0089400-mRNA-1
Gene Sequence

>Msa0089400

ATGGGATCCGAAGTTCCCATTCATATCCTACTTGTTTCTTTTCCAGCACAAGGACACATAAACCCTCTTCTAAGACTAGGTAAATGTCTTGCTGCAAAGGGCGCCTCTGTCATCTTCACTACAACAGAGAAAGCAGGCAAAGACATGCGAATCACCAACAAATTAGCAACTCCGATAGGTGATGGTTGCCTCACTTTCGAGTTCTTTGATCATTGTTTACTAGATGATGGTTCCATTGACCATGCAGAGCTTGAGCTTGTAGGGAGGCAGTTTTTTTCCAAAATGATCAAGAATCACGCTGATTCAAGTAAACCAATTTCATGTATCATATACAATCCTTTTCTTCCATGGGTTTGTGATGTAGCTTTTGAACATGATATTCTTTCTGCTTTATCATGGAATAATTCTAGTGCTGTTTTCGCCACTTACTATAACTATGTCCACAAACTTGTACCTTTTCCTTCAGAAACAGAACCTTATATTGATAACCCAACAATAAAAGCAGCAAGCAATATTCGAGGTGATTTTGTTAAGAGCGATGATGATTGTAGTATTATAGAGTGGCTAAACACAAAGCCAAAAGGTTCTGTAGTTTACATCTCTTTTGGGACTGTTGTAGACCATCCTCCAGAACAAGATCATTTGCCTGATGGGTTCTTGGAGGAAACAAGTGAGAGAGGAAAAGTGGTGAAGTGGAGTCCACAGGAGGAAGTACTTGATCATCCTTCGGTGGCATGTTTCGTGACACATTGTGGCTGGAATTCAACGATGGAAGCAATTGCTTCAGGAGTTCCGGTGTTGGCATTTCCAGCATTTGGTGACCACCTTACAAATGCAAAATTTTTGATAGATGTTTTTGGTGTAGGGATTAGATTGGGTTATAGTCTTATGGAAAACAAGTTGGTAACAAGAGATGAGGTGAAGAAGTGCTTAATGGAAGCAACAACAGGGGAAAAAGCAGAGGAGTTGAAGAAAAATGCAATGAAGTGGAAGAAGGCGGCGGAGGAAGCAGTGGCTGTCGGTGGATCCTCTGATCGGAATCTTGATGTATTTATGGAAGACATTAAGAAACGTGCTGTTGTAAACATTCACAAGGTGTAA
Protein sequence

>Msa0089400

MGSEVPIHILLVSFPAQGHINPLLRLGKCLAAKGASVIFTTTEKAGKDMRITNKLATPIGDGCLTFEFFDHCLLDDGSIDHAELELVGRQFFSKMIKNHADSSKPISCIIYNPFLPWVCDVAFEHDILSALSWNNSSAVFATYYNYVHKLVPFPSETEPYIDNPTIKAASNIRGDFVKSDDDCSIIEWLNTKPKGSVVYISFGTVVDHPPEQDHLPDGFLEETSERGKVVKWSPQEEVLDHPSVACFVTHCGWNSTMEAIASGVPVLAFPAFGDHLTNAKFLIDVFGVGIRLGYSLMENKLVTRDEVKKCLMEATTGEKAEELKKNAMKWKKAAEEAVAVGGSSDRNLDVFMEDIKKRAVVNIHKV*