AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0740420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0740420 MtrunA17_Chr8g0364471 65.775 374 125 2 1 374 1 371 0.0 514
Msa0740420 MtrunA17_Chr7g0235951 63.369 374 134 2 1 374 1 371 5.88e-178 502
Msa0740420 MtrunA17_Chr8g0335411 65.241 374 127 2 1 374 1 371 1.03e-175 496
Msa0740420 MtrunA17_Chr7g0236011 64.706 374 129 2 1 374 1 371 2.49e-170 483
Msa0740420 MtrunA17_Chr7g0247991 64.171 374 131 2 1 374 1 371 1.54e-168 478
Msa0740420 MtrunA17_Chr1g0187821 63.807 373 123 7 8 374 2 368 4.33e-167 474
Msa0740420 MtrunA17_Chr4g0066991 65.067 375 106 4 1 374 1 351 1.08e-165 470
Msa0740420 MtrunA17_Chr1g0187811 59.103 379 139 7 8 374 117 491 2.00e-157 454
Msa0740420 MtrunA17_Chr2g0311701 58.355 377 150 5 1 374 1 373 3.82e-157 449
Msa0740420 MtrunA17_Chr1g0187831 58.378 370 143 6 11 374 8 372 6.70e-155 444
Msa0740420 MtrunA17_Chr4g0055591 58.333 360 135 5 19 374 11 359 2.18e-150 431
Msa0740420 MtrunA17_Chr2g0311681 58.726 361 142 5 17 374 11 367 6.46e-150 431
Msa0740420 MtrunA17_Chr2g0311711 58.310 355 141 5 12 364 10 359 8.03e-148 425
Msa0740420 MtrunA17_Chr2g0311691 57.692 364 147 5 17 377 11 370 6.81e-147 423
Msa0740420 MtrunA17_Chr8g0354241 53.784 370 163 5 8 374 8 372 1.47e-144 417
Msa0740420 MtrunA17_Chr4g0011311 67.931 290 91 1 1 290 1 288 3.39e-143 411
Msa0740420 MtrunA17_Chr8g0354261 53.243 370 165 5 8 374 8 372 1.32e-142 412
Msa0740420 MtrunA17_Chr8g0336851 53.239 355 149 5 22 371 17 359 2.05e-138 401
Msa0740420 MtrunA17_Chr2g0311741 58.559 333 127 5 44 374 2 325 3.91e-137 396
Msa0740420 MtrunA17_Chr8g0336751 53.333 375 168 4 1 374 27 395 5.00e-137 399
Msa0740420 MtrunA17_Chr7g0235981 55.153 359 126 4 16 374 2 325 5.15e-136 394
Msa0740420 MtrunA17_Chr8g0336761 53.279 366 161 6 6 371 4 359 7.84e-136 394
Msa0740420 MtrunA17_Chr8g0348081 53.714 350 155 5 22 371 17 359 2.96e-135 393
Msa0740420 MtrunA17_Chr8g0336861 52.066 363 162 7 14 374 12 364 3.25e-133 388
Msa0740420 MtrunA17_Chr8g0336631 52.861 367 162 7 6 371 4 360 1.62e-132 386
Msa0740420 MtrunA17_Chr8g0362741 65.862 290 82 3 1 290 1 273 1.18e-130 378
Msa0740420 MtrunA17_Chr2g0311831 52.925 359 160 5 18 374 18 369 6.95e-130 380
Msa0740420 MtrunA17_Chr1g0167911 51.412 354 161 6 18 369 5 349 1.30e-129 378
Msa0740420 MtrunA17_Chr8g0336781 51.685 356 154 6 22 371 52 395 5.82e-129 378
Msa0740420 MtrunA17_Chr2g0311761 51.459 377 173 6 1 374 1 370 1.56e-128 376
Msa0740420 MtrunA17_Chr4g0066121 53.274 336 149 6 22 356 17 345 1.25e-125 369
Msa0740420 MtrunA17_Chr2g0311921 50.546 366 159 7 18 374 4 356 6.55e-125 366
Msa0740420 MtrunA17_Chr1g0167951 50.833 360 169 5 15 374 2 353 3.34e-124 364
Msa0740420 MtrunA17_Chr6g0472861 48.525 373 174 5 12 374 7 371 9.28e-122 359
Msa0740420 MtrunA17_Chr7g0225881 48.098 368 180 4 12 374 7 368 7.48e-119 352
Msa0740420 MtrunA17_Chr1g0167961 49.577 355 171 5 18 371 20 367 7.01e-118 349
Msa0740420 MtrunA17_Chr2g0311861 48.925 372 149 7 11 374 7 345 2.16e-114 339
Msa0740420 MtrunA17_Chr1g0184241 46.703 364 182 4 12 374 13 365 1.68e-109 327
Msa0740420 MtrunA17_Chr1g0167931 46.045 354 146 4 18 371 5 313 2.13e-105 315
Msa0740420 MtrunA17_Chr7g0266651 44.538 357 189 5 15 369 6 355 1.64e-98 299
Msa0740420 MtrunA17_Chr1g0161081 43.380 355 189 3 17 369 21 365 8.05e-93 285
Msa0740420 MtrunA17_Chr1g0161111 42.493 353 191 3 17 367 80 422 7.62e-90 279
Msa0740420 MtrunA17_Chr1g0161041 41.972 355 194 3 17 369 44 388 9.47e-88 273
Msa0740420 MtrunA17_Chr8g0336831 49.145 234 105 4 22 249 17 242 2.43e-76 238
Msa0740420 MtrunA17_Chr8g0364161 62.983 181 65 1 1 181 1 179 3.29e-76 236
Msa0740420 MtrunA17_Chr8g0336871 56.425 179 68 3 193 371 1 169 1.05e-61 198
Msa0740420 MtrunA17_Chr8g0336801 58.491 159 62 2 217 375 1 155 6.60e-61 195
Msa0740420 MtrunA17_Chr6g0455481 36.336 333 183 10 42 364 17 330 2.12e-55 187
Msa0740420 MtrunA17_Chr5g0412651 34.641 306 182 7 66 363 37 332 4.11e-54 184
Msa0740420 MtrunA17_Chr7g0235991 53.049 164 75 1 47 210 1 162 6.58e-54 178
Msa0740420 MtrunA17_Chr1g0184111 34.839 310 181 6 64 366 34 329 1.63e-53 182
Msa0740420 MtrunA17_Chr7g0242551 34.626 361 210 10 33 378 15 364 6.99e-53 181
Msa0740420 MtrunA17_Chr1g0184121 36.278 317 167 8 64 366 34 329 9.36e-53 180
Msa0740420 MtrunA17_Chr3g0128001 34.286 315 189 6 66 376 37 337 1.36e-52 179
Msa0740420 MtrunA17_Chr8g0345831 34.768 302 183 4 66 364 41 331 1.85e-52 179
Msa0740420 MtrunA17_Chr4g0006371 34.615 364 203 13 33 372 14 366 4.62e-52 179
Msa0740420 MtrunA17_Chr8g0375571 33.046 348 213 9 32 371 10 345 7.80e-52 178
Msa0740420 MtrunA17_Chr5g0412671 33.758 314 188 8 66 371 37 338 2.30e-51 177
Msa0740420 MtrunA17_Chr3g0109041 32.955 352 211 11 33 372 10 348 3.04e-51 176
Msa0740420 MtrunA17_Chr1g0184101 34.906 318 185 7 64 374 35 337 3.57e-51 176
Msa0740420 MtrunA17_Chr8g0364171 71.560 109 31 0 182 290 18 126 3.82e-51 169
Msa0740420 MtrunA17_Chr4g0045441 34.810 316 173 10 67 360 26 330 4.03e-51 176
Msa0740420 MtrunA17_Chr7g0265221 32.295 353 204 9 28 357 21 361 4.90e-51 177
Msa0740420 MtrunA17_Chr5g0426891 32.628 331 208 7 32 357 3 323 8.18e-51 175
Msa0740420 MtrunA17_Chr1g0179801 31.965 341 205 7 32 357 26 354 3.05e-50 174
Msa0740420 MtrunA17_Chr2g0314391 31.322 348 219 8 32 372 35 369 1.62e-49 172
Msa0740420 MtrunA17_Chr1g0184161 32.407 324 189 7 64 376 35 339 1.97e-49 171
Msa0740420 MtrunA17_Chr8g0336791 44.324 185 89 4 22 200 17 193 3.23e-49 166
Msa0740420 MtrunA17_Chr3g0126741 32.143 336 205 10 31 357 21 342 4.44e-49 171
Msa0740420 MtrunA17_Chr5g0412681 32.704 318 188 7 66 375 32 331 4.64e-49 170
Msa0740420 MtrunA17_Chr5g0421041 31.700 347 215 10 32 372 12 342 1.35e-48 169
Msa0740420 MtrunA17_Chr5g0421011 32.471 348 213 11 32 372 12 344 2.90e-48 169
Msa0740420 MtrunA17_Chr4g0045451 32.508 323 181 10 67 363 26 337 3.00e-48 168
Msa0740420 MtrunA17_Chr5g0437181 33.983 359 206 12 33 376 14 356 5.74e-48 168
Msa0740420 MtrunA17_Chr2g0314381 32.051 312 196 6 63 369 73 373 6.27e-48 169
Msa0740420 MtrunA17_Chr7g0220011 34.810 316 172 11 63 366 35 328 9.43e-48 167
Msa0740420 MtrunA17_Chr1g0162351 32.390 318 182 9 66 360 68 375 9.58e-48 168
Msa0740420 MtrunA17_Chr1g0162321 32.390 318 182 9 66 360 68 375 4.51e-47 166
Msa0740420 MtrunA17_Chr5g0423191 33.746 323 190 10 60 372 36 344 4.62e-47 165
Msa0740420 MtrunA17_Chr5g0420941 31.429 350 218 10 32 374 10 344 5.32e-47 165
Msa0740420 MtrunA17_Chr2g0311631 30.199 351 219 8 32 371 21 356 5.92e-47 165
Msa0740420 MtrunA17_Chr7g0220001 32.899 307 180 9 66 364 40 328 1.21e-46 164
Msa0740420 MtrunA17_Chr5g0420901 30.636 346 220 9 33 372 12 343 2.13e-46 164
Msa0740420 MtrunA17_Chr4g0050031 32.215 298 189 8 64 357 59 347 3.18e-46 164
Msa0740420 MtrunA17_Chr2g0314401 31.728 353 211 13 32 372 16 350 3.88e-46 163
Msa0740420 MtrunA17_Chr8g0375701 32.514 366 213 12 22 372 5 351 4.94e-46 162
Msa0740420 MtrunA17_Chr3g0113641 33.437 323 193 10 64 376 47 357 7.18e-46 162
Msa0740420 MtrunA17_Chr5g0423221 30.226 354 214 13 32 372 36 369 1.18e-45 162
Msa0740420 MtrunA17_Chr8g0375671 28.902 346 230 7 33 372 18 353 1.84e-45 161
Msa0740420 MtrunA17_Chr5g0423201 30.460 348 221 9 32 372 12 345 2.23e-45 161
Msa0740420 MtrunA17_Chr1g0184151 32.063 315 198 6 66 376 37 339 2.24e-45 160
Msa0740420 MtrunA17_Chr5g0421091 30.836 347 219 10 33 372 11 343 4.06e-45 160
Msa0740420 MtrunA17_Chr2g0319491 31.361 338 189 10 49 371 11 320 7.14e-45 159
Msa0740420 MtrunA17_Chr1g0162191 30.267 337 214 9 41 369 20 343 7.67e-45 159
Msa0740420 MtrunA17_Chr1g0162361 31.420 331 187 9 53 360 9 322 7.79e-45 159
Msa0740420 MtrunA17_Chr8g0365241 30.435 345 215 9 32 367 22 350 8.49e-45 159
Msa0740420 MtrunA17_Chr5g0420981 29.825 342 222 8 32 367 17 346 9.83e-45 159
Msa0740420 MtrunA17_Chr7g0265351 31.546 317 192 6 63 372 35 333 1.92e-44 158
Msa0740420 MtrunA17_Chr4g0045431 33.754 317 175 12 67 360 26 330 3.33e-44 157
Msa0740420 MtrunA17_Chr5g0423251 31.054 351 214 11 32 372 12 344 3.60e-44 157
Msa0740420 MtrunA17_Chr4g0045411 31.562 320 189 10 66 365 29 338 3.65e-44 157
Msa0740420 MtrunA17_Chr4g0045471 31.611 329 185 11 61 360 14 331 4.46e-44 157
Msa0740420 MtrunA17_Chr5g0421101 29.944 354 214 11 32 372 12 344 7.37e-44 157
Msa0740420 MtrunA17_Chr8g0375601 29.060 351 225 10 33 372 11 348 7.53e-44 157
Msa0740420 MtrunA17_Chr3g0093761 31.624 351 212 9 32 372 17 349 1.20e-43 156
Msa0740420 MtrunA17_Chr5g0420951 28.857 350 225 9 32 372 17 351 1.29e-43 156
Msa0740420 MtrunA17_Chr5g0439011 33.333 306 170 12 65 357 3 287 1.11e-42 153
Msa0740420 MtrunA17_Chr7g0239101 28.286 350 218 11 33 369 20 349 1.22e-42 154
Msa0740420 MtrunA17_Chr3g0121141 32.343 303 173 12 66 358 3 283 2.96e-42 151
Msa0740420 MtrunA17_Chr3g0093741 29.261 352 220 8 32 372 17 350 3.47e-42 152
Msa0740420 MtrunA17_Chr1g0167921 53.435 131 53 2 174 296 39 169 6.17e-42 146
Msa0740420 MtrunA17_Chr7g0239111 31.494 308 181 12 67 363 55 343 8.81e-42 151
Msa0740420 MtrunA17_Chr2g0332191 33.036 336 180 12 67 382 52 362 9.94e-42 152
Msa0740420 MtrunA17_Chr3g0102041 32.982 285 181 6 48 326 20 300 1.43e-41 150
Msa0740420 MtrunA17_Chr7g0239821 29.787 329 201 12 66 385 63 370 1.70e-41 151
Msa0740420 MtrunA17_Chr2g0289341 31.818 308 182 11 66 362 3 293 2.11e-41 149
Msa0740420 MtrunA17_Chr3g0093751 29.714 350 221 7 32 372 17 350 2.44e-41 150
Msa0740420 MtrunA17_Chr3g0125201 33.840 263 155 9 65 319 1 252 4.09e-41 148
Msa0740420 MtrunA17_Chr2g0296371 30.448 335 207 9 33 356 17 336 2.19e-40 148
Msa0740420 MtrunA17_Chr5g0398291 29.330 358 225 10 33 373 8 354 3.91e-40 147
Msa0740420 MtrunA17_Chr5g0423211 29.714 350 222 11 32 372 12 346 6.58e-40 146
Msa0740420 MtrunA17_Chr8g0371921 31.908 304 191 7 48 342 20 316 2.23e-39 145
Msa0740420 MtrunA17_Chr7g0239121 31.013 316 185 12 67 369 51 346 2.46e-39 145
Msa0740420 MtrunA17_Chr5g0405411 32.792 308 183 9 48 342 20 316 2.62e-39 145
Msa0740420 MtrunA17_Chr8g0371931 30.921 304 194 7 48 342 20 316 5.78e-39 144
Msa0740420 MtrunA17_Chr3g0145171 30.909 330 204 9 49 372 39 350 7.66e-39 143
Msa0740420 MtrunA17_Chr3g0087031 30.448 335 209 11 43 368 34 353 1.01e-38 143
Msa0740420 MtrunA17_Chr2g0311751 49.645 141 67 2 44 182 2 140 1.26e-38 137
Msa0740420 MtrunA17_Chr4g0045461 32.615 325 183 10 67 366 26 339 1.73e-38 143
Msa0740420 MtrunA17_Chr8g0375681 32.364 275 173 6 103 372 15 281 8.79e-38 139
Msa0740420 MtrunA17_Chr7g0250511 28.399 331 217 8 35 358 16 333 9.21e-38 140
Msa0740420 MtrunA17_Chr8g0370711 31.511 311 189 9 49 352 39 332 1.89e-37 140
Msa0740420 MtrunA17_Chr1g0168001 40.351 171 93 4 18 182 5 172 4.74e-37 133
Msa0740420 MtrunA17_Chr8g0370721 30.631 333 205 12 49 374 39 352 6.97e-37 138
Msa0740420 MtrunA17_Chr7g0232161 31.690 284 168 9 33 303 25 295 8.16e-36 134
Msa0740420 MtrunA17_Chr3g0114861 29.706 340 213 7 33 363 6 328 1.32e-35 134
Msa0740420 MtrunA17_Chr5g0420721 35.160 219 130 5 159 372 35 246 4.12e-35 131
Msa0740420 MtrunA17_Chr6g0474391 27.778 324 205 6 48 351 36 350 1.84e-34 132
Msa0740420 MtrunA17_Chr4g0064781 29.747 316 195 10 65 372 48 344 2.63e-34 131
Msa0740420 MtrunA17_Chr1g0204181 27.353 340 219 6 54 378 46 372 9.12e-34 130
Msa0740420 MtrunA17_Chr6g0488511 30.303 264 163 8 65 319 1 252 8.27e-33 125
Msa0740420 MtrunA17_Chr7g0239091 28.302 318 203 9 44 357 136 432 1.93e-32 128
Msa0740420 MtrunA17_Chr3g0126761 40.449 178 96 5 182 357 44 213 2.16e-32 123
Msa0740420 MtrunA17_Chr5g0424201 27.434 339 214 10 38 363 14 333 3.54e-32 125
Msa0740420 MtrunA17_Chr3g0145181 29.866 298 195 6 61 352 43 332 3.64e-32 125
Msa0740420 MtrunA17_Chr1g0191201 28.395 324 203 9 57 365 42 351 8.00e-32 125
Msa0740420 MtrunA17_Chr3g0145201 29.870 308 202 6 51 352 668 967 8.70e-32 129
Msa0740420 MtrunA17_Chr8g0351101 29.730 333 209 10 28 348 17 336 1.63e-31 124
Msa0740420 MtrunA17_Chr3g0105281 30.522 249 144 7 67 303 34 265 5.04e-30 119
Msa0740420 MtrunA17_Chr5g0424211 26.994 326 200 10 38 346 12 316 6.65e-30 119
Msa0740420 MtrunA17_Chr7g0239071 28.669 293 184 10 91 372 19 297 1.75e-28 114
Msa0740420 MtrunA17_Chr2g0314371 30.153 262 152 6 63 297 48 305 3.40e-28 114
Msa0740420 MtrunA17_Chr3g0125421 28.065 310 193 9 65 358 34 329 6.92e-28 113
Msa0740420 MtrunA17_Chr5g0394071 36.416 173 97 2 184 356 4 163 1.03e-27 108
Msa0740420 MtrunA17_Chr3g0092531 28.344 314 201 9 67 372 6 303 1.42e-27 112
Msa0740420 MtrunA17_Chr4g0068891 30.065 306 174 11 67 356 20 301 1.65e-27 112
Msa0740420 MtrunA17_Chr3g0114871 27.636 275 171 7 44 306 18 276 4.85e-27 109
Msa0740420 MtrunA17_Chr1g0161101 41.176 170 86 2 167 336 346 501 1.13e-26 112
Msa0740420 MtrunA17_Chr3g0130391 28.662 314 186 11 59 351 56 352 1.65e-26 110
Msa0740420 MtrunA17_Chr1g0148771 28.105 306 184 8 67 362 63 342 3.41e-26 108
Msa0740420 MtrunA17_Chr5g0407731 27.907 301 178 10 67 356 33 305 1.36e-25 106
Msa0740420 MtrunA17_Chr2g0285931 27.476 313 177 11 67 356 28 313 2.56e-25 105
Msa0740420 MtrunA17_Chr8g0389941 28.529 340 184 13 56 365 30 340 2.62e-25 106
Msa0740420 MtrunA17_Chr8g0384461 25.737 373 235 11 28 378 6 358 3.38e-25 106
Msa0740420 MtrunA17_Chr6g0486831 27.744 328 188 12 69 365 20 329 3.72e-25 105
Msa0740420 MtrunA17_Chr4g0055911 26.706 337 202 11 59 372 1 315 5.59e-25 104
Msa0740420 MtrunA17_Chr5g0407781 27.726 321 182 11 66 369 4 291 7.88e-25 103
Msa0740420 MtrunA17_Chr7g0252371 69.048 84 25 1 185 267 1 84 2.57e-24 97.1
Msa0740420 MtrunA17_Chr8g0384481 28.779 344 196 13 56 374 46 365 2.64e-24 103
Msa0740420 MtrunA17_Chr4g0037611 35.542 166 93 4 192 356 1 153 5.78e-24 98.6
Msa0740420 MtrunA17_Chr4g0075471 39.535 129 72 4 230 357 32 155 1.56e-23 96.7
Msa0740420 MtrunA17_Chr7g0233661 38.194 144 88 1 207 350 1 143 3.47e-23 95.5
Msa0740420 MtrunA17_Chr5g0420881 34.247 146 88 4 228 372 2 140 5.53e-23 94.7
Msa0740420 MtrunA17_Chr2g0319521 38.182 110 68 0 181 290 15 124 2.98e-21 89.4
Msa0740420 MtrunA17_Chr1g0158021 27.753 227 147 9 63 282 45 261 5.15e-21 92.0
Msa0740420 MtrunA17_Chr4g0055871 24.847 326 197 12 59 362 1 300 5.91e-21 93.2
Msa0740420 MtrunA17_Chr1g0170631 31.111 180 112 6 182 358 3 173 6.63e-21 90.5
Msa0740420 MtrunA17_Chr1g0194321 25.852 352 180 13 65 374 18 330 1.24e-20 92.8
Msa0740420 MtrunA17_Chr2g0313111 26.059 307 193 11 66 361 27 310 1.46e-20 92.4
Msa0740420 MtrunA17_Chr1g0158011 27.347 245 162 7 108 348 1 233 2.34e-20 90.5
Msa0740420 MtrunA17_Chr8g0358941 26.761 284 183 10 94 361 44 318 2.64e-20 91.7
Msa0740420 MtrunA17_Chr8g0348951 28.571 315 183 14 66 360 4 296 3.06e-20 91.3
Msa0740420 MtrunA17_Chr8g0336841 54.878 82 33 2 290 371 9 86 4.51e-20 84.7
Msa0740420 MtrunA17_Chr4g0064771 32.787 183 112 6 187 367 31 204 6.01e-20 87.8
Msa0740420 MtrunA17_Chr3g0092581 32.778 180 111 6 195 372 4 175 1.25e-19 86.3
Msa0740420 MtrunA17_Chr4g0053251 28.136 295 159 12 66 324 7 284 2.88e-19 88.6
Msa0740420 MtrunA17_Chr2g0311611 47.143 70 30 1 228 290 2 71 5.33e-18 78.2
Msa0740420 MtrunA17_Chr7g0219991 38.889 108 62 3 183 288 249 354 6.29e-17 82.0
Msa0740420 MtrunA17_Chr7g0247741 26.814 317 190 11 61 360 5 296 1.37e-16 80.5
Msa0740420 MtrunA17_Chr4g0052251 23.512 336 208 11 47 362 13 319 1.94e-16 80.1
Msa0740420 MtrunA17_Chr2g0293931 28.708 209 128 8 185 381 10 209 3.14e-16 77.4
Msa0740420 MtrunA17_Chr8g0375581 38.372 86 52 1 203 287 1 86 1.10e-14 69.3
Msa0740420 MtrunA17_Chr2g0311821 46.875 96 43 3 71 164 11 100 3.23e-14 69.3
Msa0740420 MtrunA17_Chr4g0004071 22.050 322 227 9 67 380 9 314 8.33e-14 72.0
Msa0740420 MtrunA17_Chr8g0375661 26.852 108 76 2 32 138 17 122 2.28e-11 62.4
Msa0740420 MtrunA17_Chr5g0420891 28.387 155 99 5 33 182 12 159 2.73e-11 62.0
Msa0740420 MtrunA17_Chr8g0375641 25.166 151 108 4 32 180 17 164 8.73e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0740420 AT5G59540.1 53.168 363 160 6 13 371 5 361 3.99e-139 403
Msa0740420 AT5G59530.1 53.951 367 156 8 13 374 4 362 1.03e-136 397
Msa0740420 AT1G04350.1 52.514 358 159 4 17 371 6 355 6.81e-136 395
Msa0740420 AT1G06620.1 52.793 358 162 4 15 371 9 360 1.13e-135 394
Msa0740420 AT2G30840.1 52.893 363 165 2 14 374 2 360 8.75e-131 382
Msa0740420 AT1G06650.2 49.591 367 173 4 14 374 7 367 1.17e-128 377
Msa0740420 AT1G06640.1 50.546 366 169 4 16 375 9 368 3.10e-126 370
Msa0740420 AT5G43450.1 50.000 362 170 4 13 371 4 357 1.61e-125 369
Msa0740420 AT2G30840.3 51.791 363 163 3 14 374 2 354 5.90e-125 367
Msa0740420 AT1G03410.2 50.712 351 163 6 16 362 3 347 3.69e-124 365
Msa0740420 AT1G03410.1 50.712 351 163 6 16 362 40 384 6.81e-124 365
Msa0740420 AT2G25450.1 49.020 357 177 3 16 372 4 355 1.47e-122 361
Msa0740420 AT2G30830.1 50.139 361 170 5 16 374 4 356 3.43e-122 360
Msa0740420 AT1G04380.1 52.108 332 145 5 42 371 21 340 5.86e-120 353
Msa0740420 AT1G03400.1 49.854 343 157 4 16 356 3 332 2.37e-119 352
Msa0740420 AT5G43440.1 48.476 361 174 6 19 374 10 363 1.11e-118 351
Msa0740420 AT1G06645.1 47.382 382 181 7 2 374 7 377 3.38e-118 350
Msa0740420 AT3G61400.1 47.564 349 166 6 18 356 10 351 1.81e-116 346
Msa0740420 AT1G03400.2 46.092 371 157 5 16 356 3 360 6.59e-113 337
Msa0740420 AT1G06620.2 52.899 276 127 2 15 289 9 282 2.72e-107 319
Msa0740420 AT5G59540.2 50.709 282 133 4 13 290 5 284 9.71e-105 313
Msa0740420 AT2G30840.2 53.597 278 127 1 14 289 2 279 4.10e-103 309
Msa0740420 AT1G06650.1 49.823 283 133 3 14 290 7 286 1.15e-101 306
Msa0740420 AT5G43450.2 49.826 287 137 2 13 296 4 286 1.40e-100 302
Msa0740420 AT1G06640.2 48.993 298 136 4 16 300 9 303 1.54e-100 303
Msa0740420 AT1G06640.3 50.890 281 129 3 16 290 9 286 1.99e-99 299
Msa0740420 AT5G43440.2 48.551 276 134 4 19 289 10 282 2.80e-93 283
Msa0740420 AT3G61400.2 47.350 283 135 5 18 290 10 288 3.88e-93 283
Msa0740420 AT1G04380.2 50.996 251 113 3 42 290 21 263 9.55e-89 271
Msa0740420 AT4G10490.1 33.526 346 213 6 37 376 11 345 2.41e-60 201
Msa0740420 AT4G10500.1 35.514 321 192 5 60 376 37 346 3.00e-60 200
Msa0740420 AT5G24530.1 35.260 346 205 8 36 374 5 338 1.82e-57 193
Msa0740420 AT3G13610.1 33.423 371 213 12 15 372 8 357 3.23e-57 192
Msa0740420 AT1G55290.1 33.994 353 201 9 32 372 25 357 3.37e-57 192
Msa0740420 AT2G36690.2 32.840 338 206 7 30 357 18 344 4.24e-53 182
Msa0740420 AT2G36690.1 32.840 338 206 7 30 357 18 344 4.24e-53 182
Msa0740420 AT3G12900.1 31.395 344 221 7 32 372 21 352 2.39e-51 177
Msa0740420 AT1G78550.1 32.945 343 209 11 38 372 23 352 8.95e-50 173
Msa0740420 AT4G16330.2 34.286 315 179 10 66 372 66 360 9.50e-50 173
Msa0740420 AT2G38240.1 31.956 363 217 11 23 372 2 347 1.25e-49 172
Msa0740420 AT4G25310.1 33.038 339 205 10 41 372 26 349 3.28e-48 169
Msa0740420 AT3G11180.1 33.505 388 220 13 1 372 29 394 6.71e-48 169
Msa0740420 AT3G11180.2 33.871 372 208 13 1 356 29 378 1.61e-47 168
Msa0740420 AT5G05600.1 31.129 363 231 9 19 372 13 365 7.33e-47 166
Msa0740420 AT3G19000.1 32.432 333 186 10 58 363 19 339 1.59e-46 164
Msa0740420 AT1G17020.1 31.395 344 215 9 38 372 23 354 4.67e-46 163
Msa0740420 AT4G25300.1 31.686 344 213 11 38 372 22 352 6.20e-45 160
Msa0740420 AT1G17010.1 29.825 342 217 9 41 372 26 354 5.05e-44 158
Msa0740420 AT1G62380.1 32.714 269 164 9 62 324 2 259 1.69e-41 150
Msa0740420 AT3G21420.1 32.059 340 201 11 33 356 17 342 3.34e-41 150
Msa0740420 AT2G44800.1 30.252 357 210 13 19 358 2 336 3.42e-41 150
Msa0740420 AT4G22880.1 29.446 343 221 9 33 361 7 342 3.86e-41 150
Msa0740420 AT4G22880.2 29.446 343 221 9 33 361 7 342 3.86e-41 150
Msa0740420 AT4G22880.3 29.446 343 221 9 33 361 7 342 3.86e-41 150
Msa0740420 AT3G51240.1 33.333 300 178 7 39 326 10 299 1.14e-40 149
Msa0740420 AT1G05010.1 33.086 269 156 6 66 324 3 257 3.30e-40 147
Msa0740420 AT3G19010.1 31.034 319 176 10 67 360 28 327 6.64e-40 146
Msa0740420 AT3G19010.4 31.034 319 176 10 67 360 28 327 6.64e-40 146
Msa0740420 AT1G12010.1 32.721 272 165 10 64 329 4 263 1.76e-39 144
Msa0740420 AT1G77330.1 30.519 308 179 12 65 358 1 287 2.59e-39 144
Msa0740420 AT1G78550.2 30.824 279 178 7 100 372 5 274 9.61e-39 141
Msa0740420 AT4G21200.1 31.757 296 176 7 65 356 40 313 4.75e-38 141
Msa0740420 AT3G19000.2 31.250 256 148 7 58 290 19 269 2.62e-37 137
Msa0740420 AT3G60290.1 30.645 310 186 8 60 358 45 336 3.13e-37 139
Msa0740420 AT5G08640.2 29.487 312 185 8 66 363 42 332 9.25e-37 137
Msa0740420 AT5G08640.1 29.487 312 185 8 66 363 42 332 9.25e-37 137
Msa0740420 AT3G55970.1 31.268 339 207 13 33 356 14 341 1.02e-36 138
Msa0740420 AT5G05600.2 30.357 280 185 6 19 290 13 290 8.52e-36 134
Msa0740420 AT4G16330.1 33.945 218 129 5 159 372 48 254 9.47e-36 133
Msa0740420 AT1G50960.1 29.642 307 197 7 54 358 27 316 3.32e-35 134
Msa0740420 AT4G25420.1 27.760 317 206 6 60 365 54 358 5.99e-35 134
Msa0740420 AT1G15550.1 32.278 316 171 13 66 365 56 344 3.30e-34 131
Msa0740420 AT4G25310.2 28.994 338 192 10 41 372 26 321 2.24e-33 128
Msa0740420 AT5G07480.1 28.803 309 186 9 67 358 44 335 2.84e-33 129
Msa0740420 AT3G19010.3 29.967 307 165 12 67 360 28 297 7.78e-33 127
Msa0740420 AT5G63590.1 30.323 310 175 9 63 352 10 298 1.54e-32 125
Msa0740420 AT5G20400.1 28.662 314 206 8 65 372 43 344 2.61e-32 126
Msa0740420 AT1G80330.1 30.931 333 182 13 66 375 48 355 3.86e-32 125
Msa0740420 AT2G19590.1 30.325 277 165 10 59 324 3 262 2.87e-31 122
Msa0740420 AT1G60980.1 28.228 333 203 8 65 378 55 370 4.20e-31 123
Msa0740420 AT5G12270.1 27.479 353 231 10 30 372 18 355 7.55e-31 122
Msa0740420 AT3G55970.2 31.868 273 167 10 33 290 14 282 5.10e-30 118
Msa0740420 AT4G25420.2 29.032 248 161 4 60 296 54 297 5.40e-30 118
Msa0740420 AT5G20550.1 28.387 310 198 10 54 352 31 327 1.92e-29 118
Msa0740420 AT5G07200.1 28.968 252 165 3 65 304 56 305 2.30e-29 118
Msa0740420 AT3G19010.2 29.070 258 146 7 67 299 28 273 3.65e-29 116
Msa0740420 AT1G80340.1 28.981 314 188 10 60 360 43 334 7.18e-29 116
Msa0740420 AT3G51240.2 39.073 151 89 2 178 326 66 215 9.67e-29 114
Msa0740420 AT4G25300.2 35.567 194 116 5 181 372 72 258 1.82e-28 113
Msa0740420 AT5G51810.1 25.846 325 216 6 65 378 61 371 5.72e-28 114
Msa0740420 AT5G63600.1 25.796 314 192 10 63 362 29 315 1.96e-27 112
Msa0740420 AT5G54000.2 27.517 298 198 9 65 355 44 330 3.34e-27 112
Msa0740420 AT4G21690.1 31.190 311 170 16 67 357 47 333 1.04e-26 110
Msa0740420 AT1G49390.1 27.619 315 208 10 65 372 43 344 1.07e-26 110
Msa0740420 AT5G63600.2 25.714 315 192 11 63 362 29 316 2.73e-26 108
Msa0740420 AT5G63595.1 27.686 242 153 4 63 304 21 240 4.23e-26 107
Msa0740420 AT3G47190.1 28.662 314 166 12 54 337 18 303 1.14e-25 107
Msa0740420 AT5G58660.1 26.174 298 173 6 59 324 26 308 1.26e-25 107
Msa0740420 AT5G51810.2 28.333 240 154 4 65 293 61 293 1.43e-25 106
Msa0740420 AT1G44090.1 28.939 311 191 9 61 355 57 353 3.13e-25 107
Msa0740420 AT1G30040.1 26.266 316 187 11 66 362 30 318 2.02e-24 103
Msa0740420 AT1G78440.1 27.184 309 192 12 67 361 18 307 1.20e-23 101
Msa0740420 AT5G63580.2 28.151 238 143 5 66 290 18 240 2.91e-23 98.6
Msa0740420 AT5G63580.1 28.632 234 139 5 66 286 18 236 2.93e-23 98.6
Msa0740420 AT2G19590.2 30.638 235 139 9 101 324 26 247 3.76e-23 99.4
Msa0740420 AT5G54000.1 27.413 259 172 8 104 355 1 250 2.09e-22 96.7
Msa0740420 AT1G49390.2 27.174 276 183 9 104 372 1 265 8.86e-22 95.1
Msa0740420 AT4G23340.1 29.450 309 188 10 63 360 6 295 1.25e-21 95.5
Msa0740420 AT3G46490.1 25.959 339 207 10 54 365 3 324 1.59e-20 92.4
Msa0740420 AT3G46500.5 27.492 331 199 13 54 362 3 314 2.31e-20 92.0
Msa0740420 AT5G07480.2 30.526 190 117 6 176 358 45 226 5.18e-20 89.4
Msa0740420 AT5G43935.1 24.756 307 173 12 67 357 19 283 7.34e-20 90.1
Msa0740420 AT2G34555.1 27.554 323 171 15 67 362 27 313 9.20e-20 90.5
Msa0740420 AT1G47990.1 28.013 307 182 14 67 356 15 299 1.81e-19 89.4
Msa0740420 AT5G58660.2 25.468 267 152 8 56 290 23 274 1.90e-19 88.6
Msa0740420 AT1G35190.2 26.866 335 178 14 59 365 1 296 2.20e-19 89.0
Msa0740420 AT3G50210.4 29.703 303 172 13 66 333 7 303 6.06e-19 87.8
Msa0740420 AT3G50210.1 29.703 303 172 13 66 333 7 303 6.06e-19 87.8
Msa0740420 AT3G50210.3 29.703 303 172 13 66 333 7 303 6.06e-19 87.8
Msa0740420 AT1G35190.1 26.608 342 193 13 59 365 1 319 2.19e-18 86.3
Msa0740420 AT3G49630.1 28.369 282 178 8 67 326 9 288 2.02e-17 83.6
Msa0740420 AT1G02400.1 27.564 312 180 15 66 356 23 309 5.80e-17 82.0
Msa0740420 AT3G49630.3 28.000 275 180 7 68 326 12 284 7.05e-17 82.0
Msa0740420 AT4G16765.6 29.064 203 127 6 169 362 47 241 1.25e-16 79.7
Msa0740420 AT4G16765.1 29.064 203 127 6 169 362 47 241 1.25e-16 79.7
Msa0740420 AT4G16765.2 29.064 203 127 6 169 362 47 241 1.25e-16 79.7
Msa0740420 AT3G49620.1 25.510 294 190 9 55 324 23 311 2.15e-16 80.9
Msa0740420 AT4G23340.2 32.967 182 107 7 187 360 3 177 1.59e-15 75.5
Msa0740420 AT3G46490.2 25.180 278 172 8 54 304 3 271 1.78e-15 77.4
Msa0740420 AT3G46500.4 29.348 184 114 5 187 362 3 178 5.65e-15 73.6
Msa0740420 AT3G46500.10 28.643 199 125 6 172 362 51 240 1.18e-14 73.9
Msa0740420 AT3G46500.1 28.643 199 125 6 172 362 51 240 1.18e-14 73.9
Msa0740420 AT4G16765.5 34.109 129 72 4 239 362 75 195 1.22e-14 72.8
Msa0740420 AT2G06960.1 34.328 134 67 4 230 363 33 145 2.32e-14 70.9
Msa0740420 AT4G16765.3 29.630 189 116 6 169 348 47 227 2.98e-14 72.4
Msa0740420 AT3G46500.7 26.246 301 180 12 54 323 3 292 7.64e-14 72.4
Msa0740420 AT3G46480.1 32.061 131 76 3 240 365 155 277 2.68e-13 70.5
Msa0740420 AT1G52820.1 23.220 323 217 9 65 374 10 314 1.85e-12 68.6

Find 83 sgRNAs with CRISPR-Local

Find 565 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCATTAGCTTCCTCTAAT+TGG 0.221971 5_1:+59341943 None:intergenic
ATTATTTATTATTCCAATAT+TGG 0.228107 5_1:-59341537 Msa0740420:CDS
AAGAATTGCCTCAAGTATTT+AGG 0.231549 5_1:-59341440 Msa0740420:intron
TGAGGCAATTCTTCTGGTTT+TGG 0.234939 5_1:+59341450 None:intergenic
TTCTACATACAAACCAATAT+TGG 0.244625 5_1:+59341524 None:intergenic
TTGATTCCATATTGTGTTAG+AGG 0.264876 5_1:-59342025 Msa0740420:five_prime_UTR
GTAACTAGAAACCACATATA+TGG 0.284266 5_1:+59332621 None:intergenic
GTCTTGGATGAGATGATTAA+TGG 0.307431 5_1:-59341630 Msa0740420:CDS
GAACTTGAAGACCACCAATT+TGG 0.309658 5_1:+59334012 None:intergenic
GAAGTTTCATCAAAGATTTA+TGG 0.309751 5_1:-59333462 Msa0740420:CDS
AATACTTGAGGCAATTCTTC+TGG 0.322461 5_1:+59341444 None:intergenic
AAGAAAATCCACCAGTCTAT+AGG 0.322522 5_1:-59333416 Msa0740420:CDS
GCTATTTGGAGAGACTCTTT+TGG 0.335560 5_1:-59341495 Msa0740420:CDS
TCTGATGTCAGTTCCTTGAT+AGG 0.338133 5_1:+59333438 None:intergenic
ATCTCATCCAAGACATTAAT+AGG 0.339754 5_1:+59341639 None:intergenic
GCTTCCTCTAATTGGTTTGT+TGG 0.363296 5_1:+59341951 None:intergenic
TCCTGAGCCAGAGTTAACTA+TGG 0.376552 5_1:-59334084 Msa0740420:CDS
AGAAAATCCACCAGTCTATA+GGG 0.381819 5_1:-59333415 Msa0740420:CDS
TGGAATTCCTATTAATGTCT+TGG 0.396054 5_1:-59341646 Msa0740420:CDS
AAGTTCTTCATGAGAATCAA+TGG 0.405916 5_1:-59333995 Msa0740420:CDS
TCGATCCAACTTGAGTATTC+CGG 0.418237 5_1:-59341781 Msa0740420:CDS
TTCTTCCAGGTGATTAATCA+TGG 0.428736 5_1:-59341666 Msa0740420:CDS
GAGTTATTGTCAGAGGCTCT+TGG 0.433628 5_1:-59334182 Msa0740420:CDS
GTCTTGCCACCAAGTCATAA+AGG 0.444437 5_1:-59333534 Msa0740420:CDS
ATCTTTGATGAAACTTCAGT+TGG 0.445378 5_1:+59333468 None:intergenic
TTTCGTCAGTGTTTATCATC+GGG 0.458703 5_1:-59333556 Msa0740420:CDS
GAAACCAACAAACCAATTAG+AGG 0.462049 5_1:-59341955 Msa0740420:CDS
ATCCGCATGACGGAGCAAAT+AGG 0.465610 5_1:+59332679 None:intergenic
CTAGTTTCATATAAAGATGA+TGG 0.465743 5_1:-59341979 Msa0740420:exon
CTTGGTCCTTTATGACTTGG+TGG 0.465957 5_1:+59333528 None:intergenic
TCATAAAGGACCAAGAGTTT+CGG 0.474992 5_1:-59333520 Msa0740420:CDS
GAATCGAAAGCTGGTGTAAG+AGG 0.475343 5_1:-59341882 Msa0740420:CDS
TAACTAGAAACCACATATAT+GGG 0.477030 5_1:+59332622 None:intergenic
ACTCTTGGTCCTTTATGACT+TGG 0.484558 5_1:+59333525 None:intergenic
GGTATTCTAAAGCTCTCTAG+TGG 0.485439 5_1:-59332797 Msa0740420:intron
CATAAAAGTTGCAGAATACA+TGG 0.494667 5_1:-59333391 Msa0740420:CDS
ATTTCGTCAGTGTTTATCAT+CGG 0.496785 5_1:-59333557 Msa0740420:CDS
TGGTTTCTAGTTACGAAGGT+TGG 0.500399 5_1:-59332612 Msa0740420:CDS
GCATGATGGAAGCTCTAAGT+TGG 0.506991 5_1:-59333349 Msa0740420:CDS
TGTTTATTTCACAACTTGAA+AGG 0.507400 5_1:+59333324 None:intergenic
GTTAATGTTCCTCCTCTACA+TGG 0.507555 5_1:-59333972 Msa0740420:CDS
AGTTCTTCATGAGAATCAAT+GGG 0.512480 5_1:-59333994 Msa0740420:CDS
CAATCATGCTATGCGTATTG+AGG 0.519638 5_1:-59341727 Msa0740420:CDS
AAAGATTTATGGTCCTATCA+AGG 0.521209 5_1:-59333451 Msa0740420:CDS
GCTATGCGTATTGAGGTAAT+CGG 0.522096 5_1:-59341720 Msa0740420:CDS
TCTGTACCCATAGTTAACTC+TGG 0.527597 5_1:+59334077 None:intergenic
ATGAACAAGACGTTGTTGAA+AGG 0.535111 5_1:-59341593 Msa0740420:CDS
AACCTATTTGCTCCGTCATG+CGG 0.535468 5_1:-59332681 Msa0740420:CDS
ACCTTTGATGAATCGAAAGC+TGG 0.535722 5_1:-59341891 Msa0740420:CDS
GAATTCCATGATTAATCACC+TGG 0.536258 5_1:+59341661 None:intergenic
AAACTAGCTACCGAAACTCT+TGG 0.537755 5_1:+59333510 None:intergenic
CCCATAGTTAACTCTGGCTC+AGG 0.542593 5_1:+59334083 None:intergenic
TTTATGTCCCTATAGACTGG+TGG 0.549958 5_1:+59333408 None:intergenic
TATGACCGGAATACTCAAGT+TGG 0.552151 5_1:+59341776 None:intergenic
ACCAGCTTTCGATTCATCAA+AGG 0.554563 5_1:+59341890 None:intergenic
GTTAACTCTGGCTCAGGACA+TGG 0.555920 5_1:+59334089 None:intergenic
AAAGAATTGAGTTGTGCTGA+AGG 0.563547 5_1:-59334140 Msa0740420:CDS
GTAAGAGGTCTTATAGAGTC+CGG 0.564520 5_1:-59341867 Msa0740420:CDS
GGTTTCTCGACCCATATATG+TGG 0.568608 5_1:-59332632 Msa0740420:CDS
GGAGCTCTTGTTGTCAACAT+AGG 0.574451 5_1:-59333951 Msa0740420:CDS
AGATGATTAATGGAATTCGT+AGG 0.577218 5_1:-59341620 Msa0740420:CDS
GCGTGGAATCTTTGTTACAC+CGG 0.579338 5_1:+59341848 None:intergenic
TCAAAAGCTGTGTGCGATGG+TGG 0.580028 5_1:+59342044 None:intergenic
TCCAAGAAAATAATGTCACT+CGG 0.595147 5_1:-59334218 Msa0740420:CDS
GTATTCTAAAGCTCTCTAGT+GGG 0.605243 5_1:-59332796 Msa0740420:intron
CCTGAGCCAGAGTTAACTAT+GGG 0.605516 5_1:-59334083 Msa0740420:CDS
AAATAATACCTAAATACTTG+AGG 0.619921 5_1:+59341432 None:intergenic
TATGTGGTTTCTAGTTACGA+AGG 0.624150 5_1:-59332616 Msa0740420:CDS
ACAACAAGAGCTCCATGTAG+AGG 0.625496 5_1:+59333960 None:intergenic
CCTTCTGAGACTACTTCAAG+TGG 0.632183 5_1:-59332713 Msa0740420:CDS
CCACTTGAAGTAGTCTCAGA+AGG 0.632258 5_1:+59332713 None:intergenic
CAGTGTTGTTCAATGTGTCA+CGG 0.634706 5_1:+59341817 None:intergenic
AACTCTGGCTCAGGACATGG+TGG 0.638860 5_1:+59334092 None:intergenic
ATGTCTTTGAGATCTATGAC+CGG 0.638913 5_1:+59341762 None:intergenic
CTAGTGGGTGTTGAAGATTG+TGG 0.641338 5_1:-59332781 Msa0740420:CDS
GTGTCACGGTAGAACATGCG+TGG 0.641455 5_1:+59341831 None:intergenic
AAAATGCATGCAAAGATTGG+GGG 0.645357 5_1:-59341689 Msa0740420:CDS
ATGGTGGTGAATTAAAATGA+AGG 0.646348 5_1:+59342060 None:intergenic
ACAAGAGCTCCATGTAGAGG+AGG 0.657858 5_1:+59333963 None:intergenic
GAATCAAAAGCTGTGTGCGA+TGG 0.662855 5_1:+59342041 None:intergenic
GGAGCAAATAGGTTCGTCGA+CGG 0.675187 5_1:+59332690 None:intergenic
AACCACAGTGATCCGCATGA+CGG 0.679578 5_1:+59332669 None:intergenic
CTCCGTCATGCGGATCACTG+TGG 0.688001 5_1:-59332671 Msa0740420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTTATTATTCCAATAT+TGG - chr5_1:59333162-59333181 Msa0740420:intron 10.0%
!!! TTTTTTTTAAAATAGTTTAG+TGG - chr5_1:59333320-59333339 Msa0740420:intron 10.0%
!!! CATATTTTAAACTTTTATTT+TGG - chr5_1:59333532-59333551 Msa0740420:CDS 10.0%
!!! TATTTTAAACTTTTATTTTG+GGG - chr5_1:59333534-59333553 Msa0740420:CDS 10.0%
!! TTACAATTTCATTAAAATTT+GGG + chr5_1:59336215-59336234 None:intergenic 10.0%
!! TTTACAATTTCATTAAAATT+TGG + chr5_1:59336216-59336235 None:intergenic 10.0%
!! TTATGTTTCATTAATAATAT+AGG + chr5_1:59336279-59336298 None:intergenic 10.0%
!! TAATTTATGAAAAAAAATAG+TGG + chr5_1:59336689-59336708 None:intergenic 10.0%
!! TAAAATAAGTTATTTATTGT+TGG - chr5_1:59336960-59336979 Msa0740420:intron 10.0%
!!! TAATTTCTAAAAAAAAATAG+TGG + chr5_1:59337115-59337134 None:intergenic 10.0%
!!! AAATTTATAAGTTTGATTTT+TGG + chr5_1:59341410-59341429 None:intergenic 10.0%
!!! ATTTTATTATAATTTTGGAT+TGG + chr5_1:59341857-59341876 None:intergenic 10.0%
!!! CTTTGAAAATTAAAAAATTG+CGG - chr5_1:59333391-59333410 Msa0740420:CDS 15.0%
!! TTTGAAAATTAAAAAATTGC+GGG - chr5_1:59333392-59333411 Msa0740420:CDS 15.0%
!! ATTCCAATTATATAAACTAA+AGG - chr5_1:59333506-59333525 Msa0740420:CDS 15.0%
!!! AAACCTTTAGTTTATATAAT+TGG + chr5_1:59333512-59333531 None:intergenic 15.0%
!!! ATATAACCATAATTTTACAA+AGG + chr5_1:59334380-59334399 None:intergenic 15.0%
!!! TTTAAAAACAATGACATTTT+AGG + chr5_1:59334894-59334913 None:intergenic 15.0%
!! TTAATAATATAGGTTTAACA+TGG + chr5_1:59336269-59336288 None:intergenic 15.0%
!! CTAATTTATGAAAAAAATAG+TGG + chr5_1:59336476-59336495 None:intergenic 15.0%
!! TCATATTATTCCTAATTATT+TGG + chr5_1:59338807-59338826 None:intergenic 15.0%
!! ACAATCAAACTATAAAATTT+GGG - chr5_1:59339652-59339671 Msa0740420:intron 15.0%
!! AAAAGAAGAATGATAAAAAA+GGG + chr5_1:59340306-59340325 None:intergenic 15.0%
!! AAAAAGAAGAATGATAAAAA+AGG + chr5_1:59340307-59340326 None:intergenic 15.0%
!!! TTTACAAGTAAAGTATTTAA+TGG - chr5_1:59340777-59340796 Msa0740420:intron 15.0%
!! TTGGAAAAAAATAAATAAAG+TGG - chr5_1:59341685-59341704 Msa0740420:CDS 15.0%
!!! AATTACATAGATTATTTTAG+CGG - chr5_1:59341731-59341750 Msa0740420:CDS 15.0%
!!! GGTACATTTTATTATAATTT+TGG + chr5_1:59341862-59341881 None:intergenic 15.0%
!!! ATTTTCCTTATCTCTTTAAA+AGG - chr5_1:59332600-59332619 Msa0740420:CDS 20.0%
!!! TAATTTTCTTTGTCAAATCA+CGG + chr5_1:59333146-59333165 None:intergenic 20.0%
!! AAATAATACCTAAATACTTG+AGG + chr5_1:59333270-59333289 None:intergenic 20.0%
!!! TTTTTTTTTTTGGTATGACA+TGG + chr5_1:59333669-59333688 None:intergenic 20.0%
!! GTCATACCAAAAAAAAAAAT+TGG - chr5_1:59333670-59333689 Msa0740420:intron 20.0%
!!! AAGAAGCCAATTTTTTTTTT+TGG + chr5_1:59333679-59333698 None:intergenic 20.0%
!!! TTATCTAATTTTTACATGAC+AGG + chr5_1:59334311-59334330 None:intergenic 20.0%
!!! AAATGTCATTGTTTTTAAAC+AGG - chr5_1:59334895-59334914 Msa0740420:intron 20.0%
!!! TTTTGAATTTGTTCATCTTT+AGG - chr5_1:59334991-59335010 Msa0740420:intron 20.0%
!! GTTACAGTTAATCATAAATT+TGG - chr5_1:59335132-59335151 Msa0740420:intron 20.0%
!! CAAATTGATTATGTATCTTA+TGG - chr5_1:59336019-59336038 Msa0740420:intron 20.0%
!! AGAGATAAGATTTATATTGT+TGG - chr5_1:59336073-59336092 Msa0740420:intron 20.0%
!! GAGATAAGATTTATATTGTT+GGG - chr5_1:59336074-59336093 Msa0740420:intron 20.0%
!!! TATTCTCTTTTAAATTTACC+AGG - chr5_1:59336242-59336261 Msa0740420:intron 20.0%
!!! TAAATAACCTGTTTTACAAT+CGG + chr5_1:59336530-59336549 None:intergenic 20.0%
!! ATTGTAAAACAGGTTATTTA+TGG - chr5_1:59336530-59336549 Msa0740420:intron 20.0%
!!! GATGTAAATAATTTCGTTTT+AGG + chr5_1:59336606-59336625 None:intergenic 20.0%
!! ATATAAACTAGCCAAATATA+TGG - chr5_1:59336632-59336651 Msa0740420:intron 20.0%
!!! TAAATAACCTGTTTTACAAT+CGG + chr5_1:59336530-59336549 None:intergenic 20.0%
!! ATTGTAAAACAGGTTATTTA+TGG - chr5_1:59336530-59336549 Msa0740420:intron 20.0%
!!! GGTGTAAATAATATCATTTT+AGG + chr5_1:59336820-59336839 None:intergenic 20.0%
!! AAAATGATATTATTTACACC+TGG - chr5_1:59336820-59336839 Msa0740420:intron 20.0%
!! ATATAAACTAGCCAAATATA+TGG - chr5_1:59336632-59336651 Msa0740420:intron 20.0%
!!! TCTAATTTCTGAAAAAATAG+TGG + chr5_1:59336903-59336922 None:intergenic 20.0%
!! AAAACAAGATTACTTATACA+TGG - chr5_1:59337032-59337051 Msa0740420:intron 20.0%
!! AAACAAGATTACTTATACAT+GGG - chr5_1:59337033-59337052 Msa0740420:intron 20.0%
!! AATATAACTAGCCAAATATA+TGG - chr5_1:59337271-59337290 Msa0740420:intron 20.0%
!! AACATGTATTCAATTAAAGA+TGG - chr5_1:59337415-59337434 Msa0740420:intron 20.0%
!!! AATTTTTTTGTATCACTTTC+TGG + chr5_1:59338034-59338053 None:intergenic 20.0%
!! GATATATATTCTATGTTTCT+TGG + chr5_1:59338317-59338336 None:intergenic 20.0%
!!! TTTTTTATTTTGAATCGCAT+TGG + chr5_1:59338582-59338601 None:intergenic 20.0%
!! ATGTTAAATTGAGATAATGT+CGG + chr5_1:59338694-59338713 None:intergenic 20.0%
!!! ATAAGGTTTATTGATTATGA+TGG + chr5_1:59338776-59338795 None:intergenic 20.0%
!! TGTACATAAAACTCAAAAAT+TGG - chr5_1:59338891-59338910 Msa0740420:intron 20.0%
!! ATTATGTTGAATAATTTGGT+AGG + chr5_1:59339048-59339067 None:intergenic 20.0%
!! TTGGATTATGTTGAATAATT+TGG + chr5_1:59339052-59339071 None:intergenic 20.0%
!!! ATCATATAATTTTGTCAATG+TGG + chr5_1:59339392-59339411 None:intergenic 20.0%
!! AAATTTGAAGGAAAAAAATG+TGG + chr5_1:59339535-59339554 None:intergenic 20.0%
!!! TTTGACCATTTTTTAACAAA+AGG - chr5_1:59339562-59339581 Msa0740420:intron 20.0%
!!! TTGACCATTTTTTAACAAAA+GGG - chr5_1:59339563-59339582 Msa0740420:intron 20.0%
!!! CAAATTTTATAGTTTGATTG+TGG + chr5_1:59339653-59339672 None:intergenic 20.0%
!! CACAATCAAACTATAAAATT+TGG - chr5_1:59339651-59339670 Msa0740420:intron 20.0%
!! CAATCAAACTATAAAATTTG+GGG - chr5_1:59339653-59339672 Msa0740420:intron 20.0%
!! AGCTTGTATAGTATAAATTA+TGG + chr5_1:59339974-59339993 None:intergenic 20.0%
!! ATAATTTATACTATACAAGC+TGG - chr5_1:59339973-59339992 Msa0740420:intron 20.0%
!! ATTAAAATAAGAAAGTGATG+TGG + chr5_1:59340345-59340364 None:intergenic 20.0%
!!! TTTAATATTTTTTATTGGCC+AGG - chr5_1:59340359-59340378 Msa0740420:intron 20.0%
!! ATTAGTAAAAGGAAAATGAT+TGG + chr5_1:59340425-59340444 None:intergenic 20.0%
!! GTAAACAAACAATTAGTAAA+AGG + chr5_1:59340436-59340455 None:intergenic 20.0%
!!! TACTATAGACTTCTTTTTTT+TGG - chr5_1:59340801-59340820 Msa0740420:intron 20.0%
!!! TTTATAAGTTTGATTTTTGG+TGG + chr5_1:59341407-59341426 None:intergenic 20.0%
!! AAAACATTATTTCAATCTTC+AGG + chr5_1:59341448-59341467 None:intergenic 20.0%
!! CATTTCATAAGGTTATTATT+AGG - chr5_1:59341613-59341632 Msa0740420:CDS 20.0%
!!! ATATTTTATTTTGAGTGATC+AGG - chr5_1:59341757-59341776 Msa0740420:CDS 20.0%
! CTAGTTTCATATAAAGATGA+TGG - chr5_1:59332720-59332739 Msa0740420:CDS 25.0%
!! TTCAACTTTTCTATCATAAC+TGG + chr5_1:59332782-59332801 None:intergenic 25.0%
! TTAAAAATGCATGCAAAGAT+TGG - chr5_1:59333007-59333026 Msa0740420:intron 25.0%
! TAAAAATGCATGCAAAGATT+GGG - chr5_1:59333008-59333027 Msa0740420:intron 25.0%
! TTCTACATACAAACCAATAT+TGG + chr5_1:59333178-59333197 None:intergenic 25.0%
! ATGTAGAAAAATCTGCTATT+TGG - chr5_1:59333190-59333209 Msa0740420:intron 25.0%
!!! ATGAGTTTTATTAGTAGTAC+TGG - chr5_1:59333473-59333492 Msa0740420:CDS 25.0%
! TTATGTATGGAATATGAATC+AGG + chr5_1:59334000-59334019 None:intergenic 25.0%
! TGATTCATATTCCATACATA+AGG - chr5_1:59333999-59334018 Msa0740420:CDS 25.0%
! ATTCCATACATAAGGTTATT+AGG - chr5_1:59334007-59334026 Msa0740420:CDS 25.0%
! TTCCATACATAAGGTTATTA+GGG - chr5_1:59334008-59334027 Msa0740420:CDS 25.0%
!! AGTGATTACGTTTATTCTTT+TGG - chr5_1:59334130-59334149 Msa0740420:CDS 25.0%
! GTTACACCTTTGTAAAATTA+TGG - chr5_1:59334371-59334390 Msa0740420:intron 25.0%
!! ACTTAAAAGTTGATCACAAT+TGG + chr5_1:59334475-59334494 None:intergenic 25.0%
! TTACGCCTTTGTAAATTATA+GGG - chr5_1:59334582-59334601 Msa0740420:intron 25.0%
! GATTACCCTATAATTTACAA+AGG + chr5_1:59334590-59334609 None:intergenic 25.0%
! AACTATTGTTCATCTTTAAC+AGG + chr5_1:59334642-59334661 None:intergenic 25.0%
! TTATCCAAAAATGAGATTTG+AGG + chr5_1:59334767-59334786 None:intergenic 25.0%
!!! TCTCATTTTTGGATAAAACA+TGG - chr5_1:59334771-59334790 Msa0740420:intron 25.0%
! GTTACAGTTAACCATAAATT+TGG - chr5_1:59334920-59334939 Msa0740420:intron 25.0%
! TCAAAAATCTGGAAAAATGA+TGG + chr5_1:59334977-59334996 None:intergenic 25.0%
! GATGAACAAATTCAAAAATC+TGG + chr5_1:59334988-59335007 None:intergenic 25.0%
! CTTATACAAGAAGTTGTTTA+TGG - chr5_1:59335030-59335049 Msa0740420:intron 25.0%
! TAAATCAGAACATCAAATTG+TGG + chr5_1:59335167-59335186 None:intergenic 25.0%
!!! GTCAATACAATTTTCTAGTA+TGG - chr5_1:59335191-59335210 Msa0740420:intron 25.0%
! GTATGAATATTGTACTATGT+TGG + chr5_1:59335217-59335236 None:intergenic 25.0%
!!! GTTCTATCAAGAAAAGTATT+TGG + chr5_1:59335341-59335360 None:intergenic 25.0%
!! ATACTTTTCTTGATAGAACA+AGG - chr5_1:59335342-59335361 Msa0740420:intron 25.0%
! TAACATGAACAATTCCATAT+TGG - chr5_1:59335666-59335685 Msa0740420:intron 25.0%
! ATATGAATACAACACCAATA+TGG + chr5_1:59335683-59335702 None:intergenic 25.0%
!!! GTCTTTATTTTATTTCTCCA+GGG - chr5_1:59335926-59335945 Msa0740420:intron 25.0%
! TATGAAAATAGAATATTCCC+TGG + chr5_1:59335946-59335965 None:intergenic 25.0%
!!! AATTTTAACGAACTTTTACG+AGG - chr5_1:59336180-59336199 Msa0740420:intron 25.0%
! TCTTGAACAATACTATAGTA+TGG - chr5_1:59336320-59336339 Msa0740420:intron 25.0%
! TAAAACAGGTTATTTATGGT+TGG - chr5_1:59336534-59336553 Msa0740420:intron 25.0%
! GTCACATATTTGTAAAAATG+TGG + chr5_1:59336667-59336686 None:intergenic 25.0%
! TAAAACAGGTTATTTATGGT+TGG - chr5_1:59336534-59336553 Msa0740420:intron 25.0%
!! TTGTGTGACCATATATTTTA+AGG - chr5_1:59337082-59337101 Msa0740420:intron 25.0%
! GAAGTTATTTATCGTTTGAA+AGG - chr5_1:59337179-59337198 Msa0740420:intron 25.0%
!! GATGTAAATAAGTTCGTTTT+AGG + chr5_1:59337246-59337265 None:intergenic 25.0%
! TTAAGGATGATACAATGATA+TGG + chr5_1:59337842-59337861 None:intergenic 25.0%
! TACAAAAAAATTGAGCTGAT+AGG - chr5_1:59338042-59338061 Msa0740420:intron 25.0%
!! GGTTATACTCTTCAAAATTT+TGG + chr5_1:59338195-59338214 None:intergenic 25.0%
! GTATAACCAAAATTGTACAA+AGG - chr5_1:59338207-59338226 Msa0740420:intron 25.0%
!! TACCAAATTACGTTTTATCA+TGG - chr5_1:59338470-59338489 Msa0740420:intron 25.0%
! TACCATGATAAAACGTAATT+TGG + chr5_1:59338475-59338494 None:intergenic 25.0%
! ATTATTTGGTAGACTCAATA+AGG + chr5_1:59338793-59338812 None:intergenic 25.0%
! ATTGAGTCTACCAAATAATT+AGG - chr5_1:59338794-59338813 Msa0740420:intron 25.0%
! AATGAATTTAGAGATTGAGT+TGG + chr5_1:59338843-59338862 None:intergenic 25.0%
!! ACAAGTTTTACTGATAAAGA+AGG + chr5_1:59338874-59338893 None:intergenic 25.0%
!! CAATTTTTGTAGTTTGATTG+TGG + chr5_1:59338971-59338990 None:intergenic 25.0%
! CACAATCAAACTACAAAAAT+TGG - chr5_1:59338969-59338988 Msa0740420:intron 25.0%
! GTTACGTCTATGTTAAAATA+TGG + chr5_1:59339513-59339532 None:intergenic 25.0%
! TTAAAAAATGGTCAAAGTGT+TGG + chr5_1:59339558-59339577 None:intergenic 25.0%
! ATTCTTAATCACAAGAATTG+TGG + chr5_1:59339592-59339611 None:intergenic 25.0%
!! GGATGCTTTTATTATGTTAA+TGG + chr5_1:59339788-59339807 None:intergenic 25.0%
!!! ACATAATAAAAGCATCCAAA+TGG - chr5_1:59339791-59339810 Msa0740420:intron 25.0%
!!! CATAATAAAAGCATCCAAAT+GGG - chr5_1:59339792-59339811 Msa0740420:intron 25.0%
!!! GTAATATGTGCATTTGTTTT+TGG + chr5_1:59339863-59339882 None:intergenic 25.0%
!! ATACTTTTACAAGACCAAAT+TGG - chr5_1:59340673-59340692 Msa0740420:intron 25.0%
!!! TATTACTATTGCACTTTTTG+AGG - chr5_1:59340943-59340962 Msa0740420:intron 25.0%
! GAAGTTTCATCAAAGATTTA+TGG - chr5_1:59341237-59341256 Msa0740420:intron 25.0%
! TGTTTATTTCACAACTTGAA+AGG + chr5_1:59341378-59341397 None:intergenic 25.0%
! TACAGCATAAAATAGCTAAA+AGG + chr5_1:59341484-59341503 None:intergenic 25.0%
! ATTAGGTCCCATTATTAATA+AGG - chr5_1:59341630-59341649 Msa0740420:CDS 25.0%
! TTGGCAACCTTATTAATAAT+GGG + chr5_1:59341640-59341659 None:intergenic 25.0%
! AGAATACCCAAATTAATAGA+GGG + chr5_1:59341890-59341909 None:intergenic 25.0%
! TAGAATACCCAAATTAATAG+AGG + chr5_1:59341891-59341910 None:intergenic 25.0%
! TAACTAGAAACCACATATAT+GGG + chr5_1:59342080-59342099 None:intergenic 25.0%
!! TAGAGCCTTTTAAAGAGATA+AGG + chr5_1:59332608-59332627 None:intergenic 30.0%
! ATGGTGGTGAATTAAAATGA+AGG + chr5_1:59332642-59332661 None:intergenic 30.0%
TTGATTCCATATTGTGTTAG+AGG - chr5_1:59332674-59332693 Msa0740420:CDS 30.0%
! AATCATTAGCTTCCTCTAAT+TGG + chr5_1:59332759-59332778 None:intergenic 30.0%
!!! CTTTGCATGCATTTTTAAGT+TGG + chr5_1:59333005-59333024 None:intergenic 30.0%
AAAAATGCATGCAAAGATTG+GGG - chr5_1:59333009-59333028 Msa0740420:intron 30.0%
TGGAATTCCTATTAATGTCT+TGG - chr5_1:59333053-59333072 Msa0740420:intron 30.0%
ATCTCATCCAAGACATTAAT+AGG + chr5_1:59333063-59333082 None:intergenic 30.0%
AGATGATTAATGGAATTCGT+AGG - chr5_1:59333079-59333098 Msa0740420:intron 30.0%
AAGAATTGCCTCAAGTATTT+AGG - chr5_1:59333259-59333278 Msa0740420:intron 30.0%
TTGATATCTTAAGAGCTCTA+GGG + chr5_1:59333431-59333450 None:intergenic 30.0%
TTTGATATCTTAAGAGCTCT+AGG + chr5_1:59333432-59333451 None:intergenic 30.0%
TTAAATATGCCAACTAAGAG+TGG + chr5_1:59333626-59333645 None:intergenic 30.0%
!! TTTTTGGTATGACATGGATT+AGG + chr5_1:59333663-59333682 None:intergenic 30.0%
CTTCTTCAATCAATTCAGTA+GGG - chr5_1:59333822-59333841 Msa0740420:intron 30.0%
AAGAATCGAAAACAGAGAAT+TGG + chr5_1:59333946-59333965 None:intergenic 30.0%
AACCCTAATAACCTTATGTA+TGG + chr5_1:59334013-59334032 None:intergenic 30.0%
GAAAGAACACAATTGATCTA+AGG - chr5_1:59334174-59334193 Msa0740420:CDS 30.0%
CAATTGATCTAAGGAAATGT+TGG - chr5_1:59334183-59334202 Msa0740420:CDS 30.0%
AACATATAACCTTAGCATCA+GGG + chr5_1:59334233-59334252 None:intergenic 30.0%
AAACATATAACCTTAGCATC+AGG + chr5_1:59334234-59334253 None:intergenic 30.0%
! CTAATTTTTACATGACAGGT+TGG + chr5_1:59334307-59334326 None:intergenic 30.0%
GGTTATATGCTTCAGTTAAT+TGG - chr5_1:59334392-59334411 Msa0740420:intron 30.0%
GTTACGCCTTTGTAAATTAT+AGG - chr5_1:59334581-59334600 Msa0740420:intron 30.0%
! AGGGTAATCTTTCTCAATTT+TGG - chr5_1:59334601-59334620 Msa0740420:intron 30.0%
TAATCTTGACTAATGAGCAT+GGG + chr5_1:59334674-59334693 None:intergenic 30.0%
ATAATCTTGACTAATGAGCA+TGG + chr5_1:59334675-59334694 None:intergenic 30.0%
CATGTGAAAGGAATACATTT+GGG + chr5_1:59334706-59334725 None:intergenic 30.0%
TCATGTGAAAGGAATACATT+TGG + chr5_1:59334707-59334726 None:intergenic 30.0%
GTATTCCTTTCACATGATTT+AGG - chr5_1:59334710-59334729 Msa0740420:intron 30.0%
! TGTACCTCAAATCTCATTTT+TGG - chr5_1:59334760-59334779 Msa0740420:intron 30.0%
!! TAAGCTGCAAGTTTTATCAA+AGG + chr5_1:59334802-59334821 None:intergenic 30.0%
AGAAGTTGTTTATTGTCAGA+TGG - chr5_1:59334826-59334845 Msa0740420:intron 30.0%
TACAAGAAGTTGTTTATGGT+CGG - chr5_1:59335034-59335053 Msa0740420:intron 30.0%
CTTATTTCACTGAATTGCAT+AGG + chr5_1:59335401-59335420 None:intergenic 30.0%
!!! TGATCATGTTATTTTCTACC+AGG - chr5_1:59335432-59335451 Msa0740420:intron 30.0%
TGTTGCACAAAACAAATTCA+CGG - chr5_1:59335752-59335771 Msa0740420:intron 30.0%
CTTGTTAATGCCAAATGAAT+TGG - chr5_1:59335776-59335795 Msa0740420:intron 30.0%
AATACATGATCCTGAGATAA+AGG - chr5_1:59335845-59335864 Msa0740420:intron 30.0%
!!! CGTCTTTATTTTATTTCTCC+AGG - chr5_1:59335925-59335944 Msa0740420:intron 30.0%
! TCATACTTGAAGCTTTTCAT+TGG - chr5_1:59335961-59335980 Msa0740420:intron 30.0%
ATTGTTGGGAGTAATGAAAT+TGG - chr5_1:59336088-59336107 Msa0740420:intron 30.0%
TCATTAAAATTTGGGTAGCT+TGG + chr5_1:59336207-59336226 None:intergenic 30.0%
GTCACGTATTTGTAAAAATG+TGG + chr5_1:59336454-59336473 None:intergenic 30.0%
ATTAGAATTTGTCCGTCTTT+AGG - chr5_1:59336705-59336724 Msa0740420:intron 30.0%
!! TTGGCTAGTTTATATTTACC+AGG + chr5_1:59336841-59336860 None:intergenic 30.0%
GTCACGCATATTAAAAAATG+TGG + chr5_1:59336881-59336900 None:intergenic 30.0%
GGTCACACAAAACATATATT+TGG + chr5_1:59337072-59337091 None:intergenic 30.0%
GTCACGTATTTGTAAAAATG+TGG + chr5_1:59336454-59336473 None:intergenic 30.0%
ACGTGGTTATGAAAAAATAG+TGG + chr5_1:59337328-59337347 None:intergenic 30.0%
CACAAATAATTGTAGTTACG+TGG + chr5_1:59337345-59337364 None:intergenic 30.0%
!! ATGTATCCAAGGTCTTATTT+GGG + chr5_1:59337639-59337658 None:intergenic 30.0%
!! AATGTATCCAAGGTCTTATT+TGG + chr5_1:59337640-59337659 None:intergenic 30.0%
CTGCAATAAAACTAGAATGA+AGG + chr5_1:59337778-59337797 None:intergenic 30.0%
!! GTTTTATTGCAGCAAATTTC+AGG - chr5_1:59337786-59337805 Msa0740420:intron 30.0%
AATCTGAATTTGAATGTGGA+TGG + chr5_1:59337873-59337892 None:intergenic 30.0%
GATGAATCTGAATTTGAATG+TGG + chr5_1:59337877-59337896 None:intergenic 30.0%
!!! TAGGATTCAATTGCTGATTT+TGG - chr5_1:59337976-59337995 Msa0740420:intron 30.0%
ATCATGTTCTTACTCATTTG+TGG + chr5_1:59338108-59338127 None:intergenic 30.0%
AGAGTCAATCAAATTACCTA+AGG + chr5_1:59338133-59338152 None:intergenic 30.0%
TGTGATAAATTGCCATAGAA+TGG - chr5_1:59338349-59338368 Msa0740420:intron 30.0%
GCTAAAACAATACCATTCTA+TGG + chr5_1:59338364-59338383 None:intergenic 30.0%
!!! TAGAATGGTATTGTTTTAGC+AGG - chr5_1:59338364-59338383 Msa0740420:intron 30.0%
!!! TTACGACCAATTTTGAAACA+CGG + chr5_1:59338447-59338466 None:intergenic 30.0%
! TACGTTTTATCATGGTAGTT+AGG - chr5_1:59338478-59338497 Msa0740420:intron 30.0%
! ACGTTTTATCATGGTAGTTA+GGG - chr5_1:59338479-59338498 Msa0740420:intron 30.0%
!! GAAGACATCATTTTTCTTTG+TGG + chr5_1:59338619-59338638 None:intergenic 30.0%
TGATTCAATTAGAACTGCAT+AGG - chr5_1:59338651-59338670 Msa0740420:intron 30.0%
AACTCAAAAATTGGAGATGT+TGG - chr5_1:59338900-59338919 Msa0740420:intron 30.0%
! AGATTTTGTTCAAGTGTTAG+TGG + chr5_1:59339020-59339039 None:intergenic 30.0%
TATGTTAGTACTGCATAACA+AGG + chr5_1:59339102-59339121 None:intergenic 30.0%
ATTACTTTGGGTAGGATTAT+TGG + chr5_1:59339151-59339170 None:intergenic 30.0%
GAACTTATGTGCATTACTTT+GGG + chr5_1:59339163-59339182 None:intergenic 30.0%
TGAACTTATGTGCATTACTT+TGG + chr5_1:59339164-59339183 None:intergenic 30.0%
!! CTCTTAAGAAGCATTGATTA+TGG + chr5_1:59339337-59339356 None:intergenic 30.0%
! ATGTCTATGATACGTCTTTT+TGG + chr5_1:59339464-59339483 None:intergenic 30.0%
!! TCAAAGTGTTGGAAATTTGA+AGG + chr5_1:59339547-59339566 None:intergenic 30.0%
! GTCACCCTTTTGTTAAAAAA+TGG + chr5_1:59339570-59339589 None:intergenic 30.0%
TAAATGTTATCACGTAGAGT+TGG + chr5_1:59339621-59339640 None:intergenic 30.0%
GGTGCAAAAACTTCATAAAT+TGG - chr5_1:59339818-59339837 Msa0740420:intron 30.0%
TAGCTACATAAAGTCTAAAG+TGG - chr5_1:59339946-59339965 Msa0740420:intron 30.0%
GTAGGAGACAAAATATCAAT+TGG - chr5_1:59340256-59340275 Msa0740420:intron 30.0%
!!! TATTTTTTATTGGCCAGGTA+AGG - chr5_1:59340364-59340383 Msa0740420:intron 30.0%
TCCAAGAAAATAATGTCACT+CGG - chr5_1:59340481-59340500 Msa0740420:intron 30.0%
!!! ACTTTTTGAGTTATTGTCAG+AGG - chr5_1:59340510-59340529 Msa0740420:intron 30.0%
AAGTTCTTCATGAGAATCAA+TGG - chr5_1:59340704-59340723 Msa0740420:intron 30.0%
AGTTCTTCATGAGAATCAAT+GGG - chr5_1:59340705-59340724 Msa0740420:intron 30.0%
ATTTCGTCAGTGTTTATCAT+CGG - chr5_1:59341142-59341161 Msa0740420:intron 30.0%
ATCTTTGATGAAACTTCAGT+TGG + chr5_1:59341234-59341253 None:intergenic 30.0%
AAAGATTTATGGTCCTATCA+AGG - chr5_1:59341248-59341267 Msa0740420:intron 30.0%
CATAAAAGTTGCAGAATACA+TGG - chr5_1:59341308-59341327 Msa0740420:intron 30.0%
!!! ATGGACAATCGTTTTAAGAA+GGG - chr5_1:59341327-59341346 Msa0740420:intron 30.0%
!! ATGTAAATGACGCTTGTTAT+TGG + chr5_1:59341515-59341534 None:intergenic 30.0%
!! GTTTTGGTCAACATTTCATA+AGG - chr5_1:59341602-59341621 Msa0740420:CDS 30.0%
CTTGGCAACCTTATTAATAA+TGG + chr5_1:59341641-59341660 None:intergenic 30.0%
AACATAAACGTCACATTGAT+AGG + chr5_1:59341665-59341684 None:intergenic 30.0%
! TCAATGTGACGTTTATGTTT+TGG - chr5_1:59341666-59341685 Msa0740420:CDS 30.0%
AAAGTGGAGTTTATGTTTAG+TGG - chr5_1:59341701-59341720 Msa0740420:CDS 30.0%
!! TTTTGAGTGATCAGGTAAAT+TGG - chr5_1:59341765-59341784 Msa0740420:CDS 30.0%
!!! TGTGGTTCTTTTAAGATATG+TGG - chr5_1:59342046-59342065 Msa0740420:five_prime_UTR 30.0%
GTAACTAGAAACCACATATA+TGG + chr5_1:59342081-59342100 None:intergenic 30.0%
! GTTTTGCCTCTAACACAATA+TGG + chr5_1:59332683-59332702 None:intergenic 35.0%
GAAACCAACAAACCAATTAG+AGG - chr5_1:59332744-59332763 Msa0740420:CDS 35.0%
!! ATGTCTTTGAGATCTATGAC+CGG + chr5_1:59332940-59332959 None:intergenic 35.0%
AAAATGCATGCAAAGATTGG+GGG - chr5_1:59333010-59333029 Msa0740420:intron 35.0%
TTCTTCCAGGTGATTAATCA+TGG - chr5_1:59333033-59333052 Msa0740420:intron 35.0%
GAATTCCATGATTAATCACC+TGG + chr5_1:59333041-59333060 None:intergenic 35.0%
GTCTTGGATGAGATGATTAA+TGG - chr5_1:59333069-59333088 Msa0740420:intron 35.0%
ATGAACAAGACGTTGTTGAA+AGG - chr5_1:59333106-59333125 Msa0740420:intron 35.0%
AATACTTGAGGCAATTCTTC+TGG + chr5_1:59333258-59333277 None:intergenic 35.0%
! AAAAATTGGCTTCTTTCCTC+TGG - chr5_1:59333684-59333703 Msa0740420:intron 35.0%
GAAGAAGGTAAAGTGATTGA+AGG + chr5_1:59333809-59333828 None:intergenic 35.0%
CCTACTGAATTGATTGAAGA+AGG + chr5_1:59333824-59333843 None:intergenic 35.0%
CCTTCTTCAATCAATTCAGT+AGG - chr5_1:59333821-59333840 Msa0740420:intron 35.0%
CACATGGAATTGAAAAACAC+AGG + chr5_1:59334051-59334070 None:intergenic 35.0%
ATTGAACACATGCAATCACA+TGG + chr5_1:59334067-59334086 None:intergenic 35.0%
AGGAAATGTTGGAAATGCTA+AGG - chr5_1:59334194-59334213 Msa0740420:CDS 35.0%
! AATCGCATTGCTCATTCTTT+TGG + chr5_1:59334334-59334353 None:intergenic 35.0%
TTCCTTTCACATGATTTAGG+TGG - chr5_1:59334713-59334732 Msa0740420:intron 35.0%
ATCCACCTAAATCATGTGAA+AGG + chr5_1:59334718-59334737 None:intergenic 35.0%
GTCACACAACTGAAAAATTG+TGG + chr5_1:59334955-59334974 None:intergenic 35.0%
TGTATCTGATGCAATTCAGA+AGG - chr5_1:59335366-59335385 Msa0740420:intron 35.0%
!!! TAACTGCACAGTTTTGTTGT+TGG - chr5_1:59335464-59335483 Msa0740420:intron 35.0%
AATTGCACTTCCTTTGTCAT+AGG - chr5_1:59335531-59335550 Msa0740420:intron 35.0%
ATTGCACTTCCTTTGTCATA+GGG - chr5_1:59335532-59335551 Msa0740420:intron 35.0%
ATGATCCTGAGATAAAGGTT+TGG - chr5_1:59335850-59335869 Msa0740420:intron 35.0%
ATAAAGGTTTGGCTACCATT+AGG - chr5_1:59335861-59335880 Msa0740420:intron 35.0%
TTCTTTGTCCTTATGCCTAA+TGG + chr5_1:59335879-59335898 None:intergenic 35.0%
ATAAGGACAAAGAAGAAAGG+TGG - chr5_1:59335885-59335904 Msa0740420:intron 35.0%
ATATAGGTTTAACATGGTCC+TGG + chr5_1:59336263-59336282 None:intergenic 35.0%
!! TCGCACTATGTATGGTTTTA+TGG - chr5_1:59336378-59336397 Msa0740420:intron 35.0%
ATTAGAACTTGTCCGTCTTT+AGG - chr5_1:59336491-59336510 Msa0740420:intron 35.0%
GGTCATACAGACCATATATT+TGG + chr5_1:59336646-59336665 None:intergenic 35.0%
GGTCACACATACCATATATT+TGG + chr5_1:59336860-59336879 None:intergenic 35.0%
ATTAGAACTTGTCCGTCTTT+AGG - chr5_1:59336491-59336510 Msa0740420:intron 35.0%
GAGTTTATCACACCTAAAGA+CGG + chr5_1:59336932-59336951 None:intergenic 35.0%
GTCACGCACCTTAAAATATA+TGG + chr5_1:59337093-59337112 None:intergenic 35.0%
ATTAGAACTTGTCCGTCTTT+AGG - chr5_1:59336491-59336510 Msa0740420:intron 35.0%
AAGTTTATCACGCCTAAAGA+CGG + chr5_1:59337146-59337165 None:intergenic 35.0%
GGTCATACAGACCATATATT+TGG + chr5_1:59336646-59336665 None:intergenic 35.0%
!! AAGGTTTGGTTCTAACTCAT+CGG + chr5_1:59337493-59337512 None:intergenic 35.0%
! TGAAACTGAGTCTGAAATCA+CGG + chr5_1:59337666-59337685 None:intergenic 35.0%
TTTCAGACTCAGTTTCAATG+AGG - chr5_1:59337669-59337688 Msa0740420:intron 35.0%
ATCCTCACAACAAATCAAGA+TGG + chr5_1:59337701-59337720 None:intergenic 35.0%
AAATTCAGATTCATCACACC+TGG - chr5_1:59337882-59337901 Msa0740420:intron 35.0%
CTCACTAAAATAGTAGCTAC+AGG - chr5_1:59337936-59337955 Msa0740420:intron 35.0%
CTACAGGTGAAATAGCTATT+TGG - chr5_1:59337952-59337971 Msa0740420:intron 35.0%
GGTGAAATAGCTATTTGGAT+AGG - chr5_1:59337957-59337976 Msa0740420:intron 35.0%
! GTATCACTTTCTGGAAGATT+TGG + chr5_1:59338025-59338044 None:intergenic 35.0%
TGGTTGAAAGTCTAGATGTA+TGG + chr5_1:59338088-59338107 None:intergenic 35.0%
AGTAAGAACATGATGTCCTT+AGG - chr5_1:59338114-59338133 Msa0740420:intron 35.0%
! GTTACGCCTTTGTACAATTT+TGG + chr5_1:59338216-59338235 None:intergenic 35.0%
TTTGCACGCAAGAAAACATA+TGG + chr5_1:59338238-59338257 None:intergenic 35.0%
! TGTTTTCTTGCGTGCAAAAT+TGG - chr5_1:59338240-59338259 Msa0740420:intron 35.0%
CTCTACGTGATATCATTTAG+AGG - chr5_1:59338940-59338959 Msa0740420:intron 35.0%
TTGTTGAGCAATAGTAGTGA+TGG + chr5_1:59339128-59339147 None:intergenic 35.0%
TTATGTGCATTACTTTGGGT+AGG + chr5_1:59339159-59339178 None:intergenic 35.0%
!!! TTTTGTGCAATAGAGTACTG+TGG + chr5_1:59339199-59339218 None:intergenic 35.0%
! TGAAGTTATTGAGGTGCTTT+GGG + chr5_1:59339241-59339260 None:intergenic 35.0%
!! AATTGTGCAATAGAGTACTG+TGG + chr5_1:59339264-59339283 None:intergenic 35.0%
!! GTTATAGAGTACTGCATATG+TGG + chr5_1:59339362-59339381 None:intergenic 35.0%
CTCTACGTGATAACATTTAC+AGG - chr5_1:59339622-59339641 Msa0740420:intron 35.0%
!! TAAAAGCATCCAAATGGGTA+AGG - chr5_1:59339797-59339816 Msa0740420:intron 35.0%
TTGGTATAGCTAATTCCAGA+AGG - chr5_1:59339837-59339856 Msa0740420:intron 35.0%
TCACCTTCAACAGTTTGATT+CGG - chr5_1:59340030-59340049 Msa0740420:intron 35.0%
! TCCGAGTGACATTATTTTCT+TGG + chr5_1:59340485-59340504 None:intergenic 35.0%
! CAGCACAACTCAATTCTTTT+AGG + chr5_1:59340558-59340577 None:intergenic 35.0%
! AAAGAATTGAGTTGTGCTGA+AGG - chr5_1:59340559-59340578 Msa0740420:intron 35.0%
! GCTGAAGGACTTTTTATTCA+AGG - chr5_1:59340574-59340593 Msa0740420:intron 35.0%
! CTTTTACAAGACCAAATTGG+TGG - chr5_1:59340676-59340695 Msa0740420:intron 35.0%
GTTTGAGTAAGTGATCTGAA+AGG - chr5_1:59340985-59341004 Msa0740420:intron 35.0%
TTTCGTCAGTGTTTATCATC+GGG - chr5_1:59341143-59341162 Msa0740420:intron 35.0%
TCATAAAGGACCAAGAGTTT+CGG - chr5_1:59341179-59341198 Msa0740420:intron 35.0%
AAGAAAATCCACCAGTCTAT+AGG - chr5_1:59341283-59341302 Msa0740420:intron 35.0%
AGAAAATCCACCAGTCTATA+GGG - chr5_1:59341284-59341303 Msa0740420:intron 35.0%
! ACTTTTATGTCCCTATAGAC+TGG + chr5_1:59341297-59341316 None:intergenic 35.0%
!!! CATGGACAATCGTTTTAAGA+AGG - chr5_1:59341326-59341345 Msa0740420:intron 35.0%
!!! TGGACAATCGTTTTAAGAAG+GGG - chr5_1:59341328-59341347 Msa0740420:intron 35.0%
AGCAATAACACAACCTTGAT+TGG - chr5_1:59341541-59341560 Msa0740420:CDS 35.0%
AACCTTGATTGGATGTTGTA+AGG - chr5_1:59341552-59341571 Msa0740420:CDS 35.0%
AACCTTACAACATCCAATCA+AGG + chr5_1:59341557-59341576 None:intergenic 35.0%
GTTATAGACTTGTGTAGTTG+TGG - chr5_1:59341580-59341599 Msa0740420:CDS 35.0%
CTACGACCCTCTATTAATTT+GGG - chr5_1:59341881-59341900 Msa0740420:CDS 35.0%
!! GTATTCTAAAGCTCTCTAGT+GGG - chr5_1:59341903-59341922 Msa0740420:CDS 35.0%
!! TATGTGGTTTCTAGTTACGA+AGG - chr5_1:59342083-59342102 Msa0740420:five_prime_UTR 35.0%
!! GCTTCCTCTAATTGGTTTGT+TGG + chr5_1:59332751-59332770 None:intergenic 40.0%
ACCTTTGATGAATCGAAAGC+TGG - chr5_1:59332808-59332827 Msa0740420:intron 40.0%
ACCAGCTTTCGATTCATCAA+AGG + chr5_1:59332812-59332831 None:intergenic 40.0%
! GTAAGAGGTCTTATAGAGTC+CGG - chr5_1:59332832-59332851 Msa0740420:intron 40.0%
! CAGTGTTGTTCAATGTGTCA+CGG + chr5_1:59332885-59332904 None:intergenic 40.0%
TCGATCCAACTTGAGTATTC+CGG - chr5_1:59332918-59332937 Msa0740420:intron 40.0%
TATGACCGGAATACTCAAGT+TGG + chr5_1:59332926-59332945 None:intergenic 40.0%
CAATCATGCTATGCGTATTG+AGG - chr5_1:59332972-59332991 Msa0740420:intron 40.0%
GCTATGCGTATTGAGGTAAT+CGG - chr5_1:59332979-59332998 Msa0740420:intron 40.0%
! GCTATTTGGAGAGACTCTTT+TGG - chr5_1:59333204-59333223 Msa0740420:intron 40.0%
! AGACTCTTTTGGATGTACCA+TGG - chr5_1:59333215-59333234 Msa0740420:intron 40.0%
!!! TCTTCTGGTTTTGGTGGATT+AGG + chr5_1:59333243-59333262 None:intergenic 40.0%
!!! TGAGGCAATTCTTCTGGTTT+TGG + chr5_1:59333252-59333271 None:intergenic 40.0%
ATGCCAACTAAGAGTGGTAT+GGG + chr5_1:59333620-59333639 None:intergenic 40.0%
TATGCCAACTAAGAGTGGTA+TGG + chr5_1:59333621-59333640 None:intergenic 40.0%
TCAATTCAGTAGGGTGAGAA+AGG - chr5_1:59333831-59333850 Msa0740420:intron 40.0%
CAATTCAGTAGGGTGAGAAA+GGG - chr5_1:59333832-59333851 Msa0740420:intron 40.0%
AATTCAGTAGGGTGAGAAAG+GGG - chr5_1:59333833-59333852 Msa0740420:intron 40.0%
GAGAAGAACAGAGAGTTTGA+AGG + chr5_1:59333924-59333943 None:intergenic 40.0%
! AGGTGTAACCAGATTTGTTC+AGG + chr5_1:59334360-59334379 None:intergenic 40.0%
TGTCAGATGGACGTTAAATG+TGG - chr5_1:59334839-59334858 Msa0740420:intron 40.0%
GGTCACACAGACCAAATTTA+TGG + chr5_1:59334934-59334953 None:intergenic 40.0%
AGAAGTTGTTTATGGTCGGA+CGG - chr5_1:59335038-59335057 Msa0740420:intron 40.0%
! CATTTTAGGCCAAACGAACA+TGG + chr5_1:59335092-59335111 None:intergenic 40.0%
TTGCACTTCCTTTGTCATAG+GGG - chr5_1:59335533-59335552 Msa0740420:intron 40.0%
GAGGATAAAAGAGCCTGTTT+GGG - chr5_1:59335562-59335581 Msa0740420:intron 40.0%
!!! ACCAGTTTTTTCATGCCGAA+CGG + chr5_1:59335629-59335648 None:intergenic 40.0%
GTGACACTGTCCAATTCATT+TGG + chr5_1:59335789-59335808 None:intergenic 40.0%
! TTTTTGTGTGCTGCAAGTCT+TGG + chr5_1:59335824-59335843 None:intergenic 40.0%
TTTGGCTACCATTAGGCATA+AGG - chr5_1:59335868-59335887 Msa0740420:intron 40.0%
GGCATAAGGACAAAGAAGAA+AGG - chr5_1:59335882-59335901 Msa0740420:intron 40.0%
CCATACATAGTGCGATTAGA+AGG + chr5_1:59336373-59336392 None:intergenic 40.0%
CCTTCTAATCGCACTATGTA+TGG - chr5_1:59336370-59336389 Msa0740420:intron 40.0%
GAGTTTATCACGCCTAAAGA+CGG + chr5_1:59336506-59336525 None:intergenic 40.0%
! AAACTCGCCGATTGTAAAAC+AGG - chr5_1:59336520-59336539 Msa0740420:intron 40.0%
GAGTTTATCACGCCTAAAGA+CGG + chr5_1:59336506-59336525 None:intergenic 40.0%
! AAACTCGCCGATTGTAAAAC+AGG - chr5_1:59336520-59336539 Msa0740420:intron 40.0%
!! TTTGGTTCTAACTCATCGGT+GGG + chr5_1:59337489-59337508 None:intergenic 40.0%
AGTGGGAGTTGAAAAAGGTT+TGG + chr5_1:59337507-59337526 None:intergenic 40.0%
!!! AACCTTTTTCAACTCCCACT+AGG - chr5_1:59337507-59337526 Msa0740420:intron 40.0%
!! TATCCAAGGTCTTATTTGGG+TGG + chr5_1:59337636-59337655 None:intergenic 40.0%
ATCACGGTGAAATGTATCCA+AGG + chr5_1:59337650-59337669 None:intergenic 40.0%
!! GTCCATCTTGATTTGTTGTG+AGG - chr5_1:59337696-59337715 Msa0740420:intron 40.0%
!! GATTTGTTGTGAGGATCCAT+TGG - chr5_1:59337705-59337724 Msa0740420:intron 40.0%
CAAATTTCAGGACTCCTCTA+TGG - chr5_1:59337798-59337817 Msa0740420:intron 40.0%
TAGTAGTCTAGAGACCATAG+AGG + chr5_1:59337815-59337834 None:intergenic 40.0%
CTGAATTTGAATGTGGATGG+AGG + chr5_1:59337870-59337889 None:intergenic 40.0%
GTGACGCGTTTGTAAAATTG+TGG + chr5_1:59338425-59338444 None:intergenic 40.0%
TCATGGTAGTTAGGGTATGT+CGG - chr5_1:59338487-59338506 Msa0740420:intron 40.0%
GTGTAATACTCGCAGCTTAA+TGG + chr5_1:59338514-59338533 None:intergenic 40.0%
ATTACACGCATATGCACAGT+AGG - chr5_1:59338527-59338546 Msa0740420:intron 40.0%
! AGTGTTAGTGGATGATCTGA+TGG + chr5_1:59339008-59339027 None:intergenic 40.0%
! GAAGTTATTGAGGTGCTTTG+GGG + chr5_1:59339240-59339259 None:intergenic 40.0%
! GTGAAGTTATTGAGGTGCTT+TGG + chr5_1:59339242-59339261 None:intergenic 40.0%
GTACTGTGGTGAAGTTATTG+AGG + chr5_1:59339250-59339269 None:intergenic 40.0%
! GTTTTTGCACCTTACCCATT+TGG + chr5_1:59339809-59339828 None:intergenic 40.0%
!!! TGCATTTGTTTTTGGCCTTC+TGG + chr5_1:59339855-59339874 None:intergenic 40.0%
TGCGCACACAAATTTCAACA+TGG + chr5_1:59339905-59339924 None:intergenic 40.0%
! TGATTGGTGAACACCCTTTT+GGG + chr5_1:59340409-59340428 None:intergenic 40.0%
! ATGATTGGTGAACACCCTTT+TGG + chr5_1:59340410-59340429 None:intergenic 40.0%
TCTGTACCCATAGTTAACTC+TGG + chr5_1:59340625-59340644 None:intergenic 40.0%
GAACTTGAAGACCACCAATT+TGG + chr5_1:59340690-59340709 None:intergenic 40.0%
GTTAATGTTCCTCCTCTACA+TGG - chr5_1:59340727-59340746 Msa0740420:intron 40.0%
GTACTACCACTAAATGAGTC+TGG - chr5_1:59341017-59341036 Msa0740420:intron 40.0%
ACTAGTCCAGACTCATTTAG+TGG + chr5_1:59341026-59341045 None:intergenic 40.0%
ACTCTTGGTCCTTTATGACT+TGG + chr5_1:59341177-59341196 None:intergenic 40.0%
AAACTAGCTACCGAAACTCT+TGG + chr5_1:59341192-59341211 None:intergenic 40.0%
TCTGATGTCAGTTCCTTGAT+AGG + chr5_1:59341264-59341283 None:intergenic 40.0%
TTTATGTCCCTATAGACTGG+TGG + chr5_1:59341294-59341313 None:intergenic 40.0%
GATTGGATGTTGTAAGGTTG+TGG - chr5_1:59341558-59341577 Msa0740420:CDS 40.0%
! GACTTGTGTAGTTGTGGTTT+TGG - chr5_1:59341586-59341605 Msa0740420:CDS 40.0%
AACGTCACATTGATAGGACT+TGG + chr5_1:59341659-59341678 None:intergenic 40.0%
CCAAATTAATAGAGGGTCGT+AGG + chr5_1:59341883-59341902 None:intergenic 40.0%
CCTACGACCCTCTATTAATT+TGG - chr5_1:59341880-59341899 Msa0740420:CDS 40.0%
!! GGTATTCTAAAGCTCTCTAG+TGG - chr5_1:59341902-59341921 Msa0740420:CDS 40.0%
!! CTCGTTTTGTTACTGACACA+AGG - chr5_1:59341942-59341961 Msa0740420:CDS 40.0%
!! GTTTTGTTACTGACACAAGG+TGG - chr5_1:59341945-59341964 Msa0740420:CDS 40.0%
!! TGGTTTCTAGTTACGAAGGT+TGG - chr5_1:59342087-59342106 Msa0740420:five_prime_UTR 40.0%
GAATCAAAAGCTGTGTGCGA+TGG + chr5_1:59332661-59332680 None:intergenic 45.0%
GAATCGAAAGCTGGTGTAAG+AGG - chr5_1:59332817-59332836 Msa0740420:intron 45.0%
GCGTGGAATCTTTGTTACAC+CGG + chr5_1:59332854-59332873 None:intergenic 45.0%
!!! TTTTGGTGGATTAGGAGCCA+TGG + chr5_1:59333235-59333254 None:intergenic 45.0%
!!! GGCAATTCTTCTGGTTTTGG+TGG + chr5_1:59333249-59333268 None:intergenic 45.0%
TGCCAACTAAGAGTGGTATG+GGG + chr5_1:59333619-59333638 None:intergenic 45.0%
AACTGGACTGAATGAACCAG+AGG + chr5_1:59333703-59333722 None:intergenic 45.0%
AGAGAGAGAGAGAGAGAAAC+TGG + chr5_1:59333720-59333739 None:intergenic 45.0%
TGTTGACATCCCTGATGCTA+AGG - chr5_1:59334221-59334240 Msa0740420:CDS 45.0%
CGATTACGCCTGAACAAATC+TGG - chr5_1:59334349-59334368 Msa0740420:intron 45.0%
AGTGTGCTTCGATGTTCGTT+TGG - chr5_1:59334868-59334887 Msa0740420:intron 45.0%
AGTGTGCTTCCATGTTCGTT+TGG - chr5_1:59335080-59335099 Msa0740420:intron 45.0%
GTGCAGTTAGTAGAGTTACC+TGG + chr5_1:59335453-59335472 None:intergenic 45.0%
TGCACTTCCTTTGTCATAGG+GGG - chr5_1:59335534-59335553 Msa0740420:intron 45.0%
GGAGGATAAAAGAGCCTGTT+TGG - chr5_1:59335561-59335580 Msa0740420:intron 45.0%
! AAGAGCCTGTTTGGGTTTAG+TGG - chr5_1:59335570-59335589 Msa0740420:intron 45.0%
GCATTCCACTAAACCCAAAC+AGG + chr5_1:59335578-59335597 None:intergenic 45.0%
TATTGCCACCATTTCCCGTT+CGG - chr5_1:59335611-59335630 Msa0740420:intron 45.0%
! TTTTCATGCCGAACGGGAAA+TGG + chr5_1:59335622-59335641 None:intergenic 45.0%
!!! CCAGTTTTTTCATGCCGAAC+GGG + chr5_1:59335628-59335647 None:intergenic 45.0%
GGTAGCCAAACCTTTATCTC+AGG + chr5_1:59335858-59335877 None:intergenic 45.0%
AGGACAAAGAAGAAAGGTGG+TGG - chr5_1:59335888-59335907 Msa0740420:intron 45.0%
! CCATTTTCTATCCTTCCACG+AGG + chr5_1:59335987-59336006 None:intergenic 45.0%
CCTCGTGGAAGGATAGAAAA+TGG - chr5_1:59335984-59336003 Msa0740420:intron 45.0%
AGTACAAGCAGCAAAGACTG+CGG - chr5_1:59337449-59337468 Msa0740420:intron 45.0%
!! GTTTGGTTCTAACTCATCGG+TGG + chr5_1:59337490-59337509 None:intergenic 45.0%
AGCCTAGTGGGAGTTGAAAA+AGG + chr5_1:59337512-59337531 None:intergenic 45.0%
TTTCAACTCCCACTAGGCTA+TGG - chr5_1:59337513-59337532 Msa0740420:intron 45.0%
TTCAACTCCCACTAGGCTAT+GGG - chr5_1:59337514-59337533 Msa0740420:intron 45.0%
CAACCACCCAAATAAGACCT+TGG - chr5_1:59337630-59337649 Msa0740420:intron 45.0%
AAGGCAACTATTCCCTACTC+TGG + chr5_1:59337759-59337778 None:intergenic 45.0%
TGTGGATGGAGGATGCTTTA+AGG + chr5_1:59337859-59337878 None:intergenic 45.0%
TTCAGATTCATCACACCTGG+TGG - chr5_1:59337885-59337904 Msa0740420:intron 45.0%
TTGGCAGGTTAGGAACTAGA+TGG + chr5_1:59338006-59338025 None:intergenic 45.0%
TCTGGAAGATTTGGCAGGTT+AGG + chr5_1:59338016-59338035 None:intergenic 45.0%
! CACTTTCTGGAAGATTTGGC+AGG + chr5_1:59338021-59338040 None:intergenic 45.0%
GCGTCACCGTGTTTCAAAAT+TGG - chr5_1:59338438-59338457 Msa0740420:intron 45.0%
TCGCCGAATCAAACTGTTGA+AGG + chr5_1:59340036-59340055 None:intergenic 45.0%
!! TCAACAGTTTGATTCGGCGA+CGG - chr5_1:59340036-59340055 Msa0740420:intron 45.0%
AGATGCCAAGGACATAGAGA+TGG - chr5_1:59340216-59340235 Msa0740420:intron 45.0%
TTTATTGGCCAGGTAAGGAG+TGG - chr5_1:59340369-59340388 Msa0740420:intron 45.0%
! TACGAGGGTGTATACCCAAA+AGG - chr5_1:59340392-59340411 Msa0740420:intron 45.0%
! ACGAGGGTGTATACCCAAAA+GGG - chr5_1:59340393-59340412 Msa0740420:intron 45.0%
GAGTTATTGTCAGAGGCTCT+TGG - chr5_1:59340517-59340536 Msa0740420:intron 45.0%
TCCTGAGCCAGAGTTAACTA+TGG - chr5_1:59340615-59340634 Msa0740420:intron 45.0%
CCTGAGCCAGAGTTAACTAT+GGG - chr5_1:59340616-59340635 Msa0740420:intron 45.0%
ACAACAAGAGCTCCATGTAG+AGG + chr5_1:59340742-59340761 None:intergenic 45.0%
! GGAGCTCTTGTTGTCAACAT+AGG - chr5_1:59340748-59340767 Msa0740420:intron 45.0%
GTCTTGCCACCAAGTCATAA+AGG - chr5_1:59341165-59341184 Msa0740420:intron 45.0%
! CTTGGTCCTTTATGACTTGG+TGG + chr5_1:59341174-59341193 None:intergenic 45.0%
!!! CGTTTTAAGAAGGGGCATGA+TGG - chr5_1:59341336-59341355 Msa0740420:intron 45.0%
!! GCATGATGGAAGCTCTAAGT+TGG - chr5_1:59341350-59341369 Msa0740420:intron 45.0%
!! CTAGTGGGTGTTGAAGATTG+TGG - chr5_1:59341918-59341937 Msa0740420:CDS 45.0%
CCACTTGAAGTAGTCTCAGA+AGG + chr5_1:59341989-59342008 None:intergenic 45.0%
!! CCTTCTGAGACTACTTCAAG+TGG - chr5_1:59341986-59342005 Msa0740420:five_prime_UTR 45.0%
AACCTATTTGCTCCGTCATG+CGG - chr5_1:59342018-59342037 Msa0740420:five_prime_UTR 45.0%
GGTTTCTCGACCCATATATG+TGG - chr5_1:59342067-59342086 Msa0740420:five_prime_UTR 45.0%
!!! ATATTTTAAACTTTTATTTT+GGG - chr5_1:59333533-59333552 Msa0740420:CDS 5.0%
!!! GATTTTTATTAATAAAATTT+TGG + chr5_1:59339071-59339090 None:intergenic 5.0%
!!! CTTATTTTAATATTTTTTAT+TGG - chr5_1:59340354-59340373 Msa0740420:intron 5.0%
TCAAAAGCTGTGTGCGATGG+TGG + chr5_1:59332658-59332677 None:intergenic 50.0%
CAAAGATTGGGGGTTCTTCC+AGG - chr5_1:59333020-59333039 Msa0740420:intron 50.0%
! ATGGGGTGTTTGTCCACGTA+AGG + chr5_1:59333602-59333621 None:intergenic 50.0%
CACCCCATACCACTCTTAGT+TGG - chr5_1:59333614-59333633 Msa0740420:intron 50.0%
GAAGGCGAAATTCTTCTCGC+CGG + chr5_1:59333791-59333810 None:intergenic 50.0%
! TCAGGAGTTAGCGCTGAAGA+AGG + chr5_1:59333982-59334001 None:intergenic 50.0%
GACTAATGAGCATGGGTGAG+AGG + chr5_1:59334667-59334686 None:intergenic 50.0%
AGTTGTTTATGGTCGGACGG+AGG - chr5_1:59335041-59335060 Msa0740420:intron 50.0%
TCCTTTGTCATAGGGGGCTT+TGG - chr5_1:59335540-59335559 Msa0740420:intron 50.0%
TCCAAAGCCCCCTATGACAA+AGG + chr5_1:59335544-59335563 None:intergenic 50.0%
! TTTGTCATAGGGGGCTTTGG+AGG - chr5_1:59335543-59335562 Msa0740420:intron 50.0%
CCCGTTCGGCATGAAAAAAC+TGG - chr5_1:59335625-59335644 Msa0740420:intron 50.0%
!! GAAGCTTTTCATTGGCCTCG+TGG - chr5_1:59335969-59335988 Msa0740420:intron 50.0%
!! CTTTTCATTGGCCTCGTGGA+AGG - chr5_1:59335973-59335992 Msa0740420:intron 50.0%
GTACAAGCAGCAAAGACTGC+GGG - chr5_1:59337450-59337469 Msa0740420:intron 50.0%
CAGCAAAGACTGCGGGTTTA+GGG - chr5_1:59337457-59337476 Msa0740420:intron 50.0%
TCCATTGGAGACACCACTGA+AGG - chr5_1:59337720-59337739 Msa0740420:intron 50.0%
CCATTGGAGACACCACTGAA+GGG - chr5_1:59337721-59337740 Msa0740420:intron 50.0%
CCACTGAAGGGCTAATGCTT+CGG - chr5_1:59337733-59337752 Msa0740420:intron 50.0%
CTAATGCTTCGGCCAGAGTA+GGG - chr5_1:59337744-59337763 Msa0740420:intron 50.0%
AGATTCATCACACCTGGTGG+AGG - chr5_1:59337888-59337907 Msa0740420:intron 50.0%
GATTCATCACACCTGGTGGA+GGG - chr5_1:59337889-59337908 Msa0740420:intron 50.0%
ATTCATCACACCTGGTGGAG+GGG - chr5_1:59337890-59337909 Msa0740420:intron 50.0%
!! TGCTTTGGGGTTGCTTTGAC+AGG + chr5_1:59339227-59339246 None:intergenic 50.0%
TGCCAAGGTTGAATCGCAGA+AGG - chr5_1:59340066-59340085 Msa0740420:intron 50.0%
CTCCTTCTGCGATTCAACCT+TGG + chr5_1:59340071-59340090 None:intergenic 50.0%
GGTTGAATCGCAGAAGGAGA+AGG - chr5_1:59340072-59340091 Msa0740420:intron 50.0%
GGAGAAGGTTGAATCGCAGA+AGG - chr5_1:59340087-59340106 Msa0740420:intron 50.0%
AGAGACCGTTAGAGAGAGTG+CGG - chr5_1:59340113-59340132 Msa0740420:intron 50.0%
TGCCAAGGACATAGAGATGG+AGG - chr5_1:59340219-59340238 Msa0740420:intron 50.0%
CTCCTCCATCTCTATGTCCT+TGG + chr5_1:59340224-59340243 None:intergenic 50.0%
! GTTAACTCTGGCTCAGGACA+TGG + chr5_1:59340613-59340632 None:intergenic 50.0%
! CCCATAGTTAACTCTGGCTC+AGG + chr5_1:59340619-59340638 None:intergenic 50.0%
ACAAGAGCTCCATGTAGAGG+AGG + chr5_1:59340739-59340758 None:intergenic 50.0%
GGAGCAAATAGGTTCGTCGA+CGG + chr5_1:59342012-59342031 None:intergenic 50.0%
! ATCCGCATGACGGAGCAAAT+AGG + chr5_1:59342023-59342042 None:intergenic 50.0%
AACCACAGTGATCCGCATGA+CGG + chr5_1:59342033-59342052 None:intergenic 50.0%
GTGTCACGGTAGAACATGCG+TGG + chr5_1:59332871-59332890 None:intergenic 55.0%
!! CTTAAGAGCTCTAGGGACGC+AGG + chr5_1:59333424-59333443 None:intergenic 55.0%
CGTAAGGTGGTCGACGTATC+AGG + chr5_1:59333586-59333605 None:intergenic 55.0%
GATACGTCGACCACCTTACG+TGG - chr5_1:59333586-59333605 Msa0740420:intron 55.0%
GGGTGTTTGTCCACGTAAGG+TGG + chr5_1:59333599-59333618 None:intergenic 55.0%
GAAAAACTGGAACAGGGGGG+GGG + chr5_1:59333767-59333786 None:intergenic 55.0%
CGAAAAACTGGAACAGGGGG+GGG + chr5_1:59333768-59333787 None:intergenic 55.0%
GCGAAAAACTGGAACAGGGG+GGG + chr5_1:59333769-59333788 None:intergenic 55.0%
GGCGAAAAACTGGAACAGGG+GGG + chr5_1:59333770-59333789 None:intergenic 55.0%
CGGCGAAAAACTGGAACAGG+GGG + chr5_1:59333771-59333790 None:intergenic 55.0%
CCGGCGAAAAACTGGAACAG+GGG + chr5_1:59333772-59333791 None:intergenic 55.0%
! CCCCTGTTCCAGTTTTTCGC+CGG - chr5_1:59333769-59333788 Msa0740420:intron 55.0%
GCCGGCGAAAAACTGGAACA+GGG + chr5_1:59333773-59333792 None:intergenic 55.0%
TCTTCTCGCCGGCGAAAAAC+TGG + chr5_1:59333780-59333799 None:intergenic 55.0%
GGTCGGACGGAGGTTAAATG+AGG - chr5_1:59335051-59335070 Msa0740420:intron 55.0%
TCATGCCGAACGGGAAATGG+TGG + chr5_1:59335619-59335638 None:intergenic 55.0%
GCAGCAAAGACTGCGGGTTT+AGG - chr5_1:59337456-59337475 Msa0740420:intron 55.0%
GTTGCTGCCCATAGCCTAGT+GGG + chr5_1:59337524-59337543 None:intergenic 55.0%
TGTTGCTGCCCATAGCCTAG+TGG + chr5_1:59337525-59337544 None:intergenic 55.0%
CCCTTCAGTGGTGTCTCCAA+TGG + chr5_1:59337724-59337743 None:intergenic 55.0%
! CCGAAGCATTAGCCCTTCAG+TGG + chr5_1:59337736-59337755 None:intergenic 55.0%
GCTAATGCTTCGGCCAGAGT+AGG - chr5_1:59337743-59337762 Msa0740420:intron 55.0%
TTCATCACACCTGGTGGAGG+GGG - chr5_1:59337891-59337910 Msa0740420:intron 55.0%
! TTTTAGTGTCCCCCTCCACC+AGG + chr5_1:59337903-59337922 None:intergenic 55.0%
GATCGGAGACTAGGAGGAGA+TGG - chr5_1:59340168-59340187 Msa0740420:intron 55.0%
! AGGAGATGGCGGTCAGAGAT+CGG - chr5_1:59340182-59340201 Msa0740420:intron 55.0%
CCAGGTAAGGAGTGGTACGA+GGG - chr5_1:59340377-59340396 Msa0740420:intron 55.0%
! AACTCTGGCTCAGGACATGG+TGG + chr5_1:59340610-59340629 None:intergenic 55.0%
CGCCGGCGAAAAACTGGAAC+AGG + chr5_1:59333774-59333793 None:intergenic 60.0%
TCGTTCGCTCTCGCTCTCGA+CGG - chr5_1:59333898-59333917 Msa0740420:intron 60.0%
GACGGCCGCACTCTCTCTAA+CGG + chr5_1:59340121-59340140 None:intergenic 60.0%
! GTTAGAGAGAGTGCGGCCGT+CGG - chr5_1:59340120-59340139 Msa0740420:intron 60.0%
CATCTCCTCCCAGTCTCCGA+CGG + chr5_1:59340139-59340158 None:intergenic 60.0%
! AGGAGATGGCGGTCGGAGAT+CGG - chr5_1:59340151-59340170 Msa0740420:intron 60.0%
GTCGGAGATCGGAGACTAGG+AGG - chr5_1:59340162-59340181 Msa0740420:intron 60.0%
CGGAGACTAGGAGGAGATGG+CGG - chr5_1:59340171-59340190 Msa0740420:intron 60.0%
GCGGTCAGAGATCGGAGAGT+GGG - chr5_1:59340190-59340209 Msa0740420:intron 60.0%
GTCAGAGATCGGAGAGTGGG+AGG - chr5_1:59340193-59340212 Msa0740420:intron 60.0%
GAGAGTGGGAGGAGATGCCA+AGG - chr5_1:59340204-59340223 Msa0740420:intron 60.0%
GAGGAGAGCAGAGATCGCGT+AGG - chr5_1:59340238-59340257 Msa0740420:intron 60.0%
GCCAGGTAAGGAGTGGTACG+AGG - chr5_1:59340376-59340395 Msa0740420:intron 60.0%
CCCTCGTACCACTCCTTACC+TGG + chr5_1:59340380-59340399 None:intergenic 60.0%
CTCCGTCATGCGGATCACTG+TGG - chr5_1:59342028-59342047 Msa0740420:five_prime_UTR 60.0%
GGCGACGGAGACTACTGCCA+AGG - chr5_1:59340051-59340070 Msa0740420:intron 65.0%
CGTCGGAGACTGGGAGGAGA+TGG - chr5_1:59340137-59340156 Msa0740420:intron 65.0%
CGGAGACTGGGAGGAGATGG+CGG - chr5_1:59340140-59340159 Msa0740420:intron 65.0%
! GACTGGGAGGAGATGGCGGT+CGG - chr5_1:59340144-59340163 Msa0740420:intron 65.0%
GCGGTCGGAGATCGGAGACT+AGG - chr5_1:59340159-59340178 Msa0740420:intron 65.0%
GGCGGTCAGAGATCGGAGAG+TGG - chr5_1:59340189-59340208 Msa0740420:intron 65.0%
CAGGGGGGGGGAGAGAGAGA+GGG + chr5_1:59333755-59333774 None:intergenic 70.0%
ACAGGGGGGGGGAGAGAGAG+AGG + chr5_1:59333756-59333775 None:intergenic 70.0%
AGAGTGCGGCCGTCGGAGAC+TGG - chr5_1:59340127-59340146 Msa0740420:intron 70.0%
GAGTGCGGCCGTCGGAGACT+GGG - chr5_1:59340128-59340147 Msa0740420:intron 70.0%
TGCGGCCGTCGGAGACTGGG+AGG - chr5_1:59340131-59340150 Msa0740420:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 59332597 59342124 59332597 ID=Msa0740420;Name=Msa0740420
chr5_1 mRNA 59332597 59342124 59332597 ID=Msa0740420-mRNA-1;Parent=Msa0740420;Name=Msa0740420-mRNA-1;_AED=0.35;_eAED=0.35;_QI=139|0.66|0.5|1|0.66|0.5|4|0|444
chr5_1 exon 59332597 59332807 59332597 ID=Msa0740420-mRNA-1:exon:17107;Parent=Msa0740420-mRNA-1
chr5_1 exon 59333339 59333595 59333339 ID=Msa0740420-mRNA-1:exon:17106;Parent=Msa0740420-mRNA-1
chr5_1 exon 59333938 59334259 59333938 ID=Msa0740420-mRNA-1:exon:17105;Parent=Msa0740420-mRNA-1
chr5_1 exon 59341441 59342124 59341441 ID=Msa0740420-mRNA-1:exon:17104;Parent=Msa0740420-mRNA-1
chr5_1 five_prime_UTR 59341986 59342124 59341986 ID=Msa0740420-mRNA-1:five_prime_utr;Parent=Msa0740420-mRNA-1
chr5_1 CDS 59341441 59341985 59341441 ID=Msa0740420-mRNA-1:cds;Parent=Msa0740420-mRNA-1
chr5_1 CDS 59333938 59334259 59333938 ID=Msa0740420-mRNA-1:cds;Parent=Msa0740420-mRNA-1
chr5_1 CDS 59333339 59333595 59333339 ID=Msa0740420-mRNA-1:cds;Parent=Msa0740420-mRNA-1
chr5_1 CDS 59332597 59332807 59332597 ID=Msa0740420-mRNA-1:cds;Parent=Msa0740420-mRNA-1
Gene Sequence

>Msa0740420

ATGATGGTGAAACCAACAAACCAATTAGAGGAAGCTAATGATTCCAGTTATGATAGAAAAGTTGAAGTGACAACCTTTGATGAATCGAAAGCTGGTGTAAGAGGTCTTATAGAGTCCGGTGTAACAAAGATTCCACGCATGTTCTACCGTGACACATTGAACAACACTGAACATTTAGTCAATCGATCCAACTTGAGTATTCCGGTCATAGATCTCAAAGACATACACAACAATATCAATCATGCTATGCGTATTGAGGTAATCGGCCAACTTAAAAATGCATGCAAAGATTGGGGGTTCTTCCAGGTGATTAATCATGGAATTCCTATTAATGTCTTGGATGAGATGATTAATGGAATTCGTAGGTTTCATGAACAAGACGTTGTTGAAAGGAAAAAATTTTACAACCGTGATTTGACAAAGAAAATTATTTATTATTCCAATATTGGTTTGTATGTAGAAAAATCTGCTATTTGGAGAGACTCTTTTGGATGTACCATGGCTCCTAATCCACCAAAACCAGAAGAATTGCCTCAAGTATTTAGAGACATTATAATAGAATATTCCAAGAAAATAATGTCACTCGGATCTACACTTTTTGAGTTATTGTCAGAGGCTCTTGGCTTGAATTCATCTTACCTAAAAGAATTGAGTTGTGCTGAAGGACTTTTTATTCAAGGTCATTATTATCCACCATGTCCTGAGCCAGAGTTAACTATGGGTACAGACAAGCACGCTGATTCTAGCTTCATGACAATACTTTTACAAGACCAAATTGGTGGTCTTCAAGTTCTTCATGAGAATCAATGGGTTAATGTTCCTCCTCTACATGGAGCTCTTGTTGTCAACATAGGAGATCTTTTACAACTTATAACAAATGACAATTTCGTCAGTGTTTATCATCGGGTCTTGCCACCAAGTCATAAAGGACCAAGAGTTTCGGTAGCTAGTTTCTTTGCAAATTCTCATGATCCAACTGAAGTTTCATCAAAGATTTATGGTCCTATCAAGGAACTGACATCAGAAGAAAATCCACCAGTCTATAGGGACATAAAAGTTGCAGAATACATGGACAATCGTTTTAAGAAGGGGCATGATGGAAGCTCTAAGTTGGAGCCTTTCAACTCTCTAGTGGGTGTTGAAGATTGTGGTCTCGTTTTGTTACTGACACAAGGTGGTGTACACTTTCAGCGTCACCTTCTGAGACTACTTCAAGTGGCCGTCGACGAACCTATTTGCTCCGTCATGCGGATCACTGTGGTTCTTTTAAGATATGTGGTTTCTCGACCCATATATGTGGTTTCTAGTTACGAAGGTTGGAGTGAGTTCAGTTGA
Protein sequence

>Msa0740420

MMVKPTNQLEEANDSSYDRKVEVTTFDESKAGVRGLIESGVTKIPRMFYRDTLNNTEHLVNRSNLSIPVIDLKDIHNNINHAMRIEVIGQLKNACKDWGFFQVINHGIPINVLDEMINGIRRFHEQDVVERKKFYNRDLTKKIIYYSNIGLYVEKSAIWRDSFGCTMAPNPPKPEELPQVFRDIIIEYSKKIMSLGSTLFELLSEALGLNSSYLKELSCAEGLFIQGHYYPPCPEPELTMGTDKHADSSFMTILLQDQIGGLQVLHENQWVNVPPLHGALVVNIGDLLQLITNDNFVSVYHRVLPPSHKGPRVSVASFFANSHDPTEVSSKIYGPIKELTSEENPPVYRDIKVAEYMDNRFKKGHDGSSKLEPFNSLVGVEDCGLVLLLTQGGVHFQRHLLRLLQVAVDEPICSVMRITVVLLRYVVSRPIYVVSSYEGWSEFS*