Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0091370 | XP_004500526.1 | 45.089 | 448 | 180 | 6 | 71 | 512 | 412 | 799 | 2.06e-119 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0091370 | A0A1S2Y787 | 45.089 | 448 | 180 | 6 | 71 | 512 | 412 | 799 | 9.85e-120 | 382 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032920 | Msa0091370 | 0.802669 | 5.027863e-49 | -8.615850e-47 |
| Msa0032960 | Msa0091370 | 0.829369 | 5.350003e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0091370 | MtrunA17_Chr1g0191891 | 82.192 | 73 | 9 | 1 | 1 | 73 | 1 | 69 | 1.31e-20 | 91.7 |
| Msa0091370 | MtrunA17_Chr6g0484341 | 29.515 | 227 | 117 | 7 | 236 | 458 | 5 | 192 | 1.05e-19 | 87.0 |
| Msa0091370 | MtrunA17_Chr4g0075461 | 32.639 | 144 | 86 | 4 | 380 | 512 | 1 | 144 | 9.46e-18 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 120 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAAAATTCTTGTTGTTTC+TGG | 0.056040 | 1_2:-73506679 | None:intergenic |
| CAGACGGAAATTGTGGATTT+AGG | 0.168028 | 1_2:+73506765 | Msa0091370:CDS |
| CTTATGCAATTGAGGAATTA+TGG | 0.185089 | 1_2:+73506234 | Msa0091370:CDS |
| CTGCCTTGTGCTTGTGAGTT+AGG | 0.198216 | 1_2:+73506092 | Msa0091370:CDS |
| TTTCGGTCACTTGACATTAT+TGG | 0.203251 | 1_2:+73506263 | Msa0091370:CDS |
| GGAGGAGGAGGTGTTGGTGG+TGG | 0.241605 | 1_2:-73505333 | None:intergenic |
| AGGTGTTGGTGGTGGGGTTG+AGG | 0.263820 | 1_2:-73505325 | None:intergenic |
| AGAGATTCATTGAAGATATC+AGG | 0.300818 | 1_2:+73506914 | Msa0091370:CDS |
| ATCCTTCTTCACTCCTCCTT+TGG | 0.301228 | 1_2:-73506369 | None:intergenic |
| CATAGGAAAGAACGTCTTAC+TGG | 0.305631 | 1_2:-73507035 | None:intergenic |
| TTATTTCAAATTAAAATAAC+TGG | 0.311152 | 1_2:-73507137 | None:intergenic |
| GAGGAGGAGGTGTTGGTGGT+GGG | 0.322473 | 1_2:-73505332 | None:intergenic |
| AGGAGGAGGTGTTGGTGGTG+GGG | 0.324079 | 1_2:-73505331 | None:intergenic |
| AGGAATTATGGAAAAGGTTT+CGG | 0.334249 | 1_2:+73506246 | Msa0091370:CDS |
| ATAAAATTCTTGTTGTTTCT+GGG | 0.338206 | 1_2:-73506678 | None:intergenic |
| AGACGGAAATTGTGGATTTA+GGG | 0.339498 | 1_2:+73506766 | Msa0091370:CDS |
| GAAGGTTCTGGAAGATGATT+TGG | 0.344754 | 1_2:-73505419 | None:intergenic |
| ATTGCACTATTACTTGGATA+TGG | 0.352569 | 1_2:+73506791 | Msa0091370:CDS |
| GATCGGGGATGGGAAGGTTC+TGG | 0.355186 | 1_2:-73505431 | None:intergenic |
| GATAACATCAAGTTGCAATT+AGG | 0.358733 | 1_2:+73505879 | Msa0091370:CDS |
| TGAATTGAATCTAATGGTAT+AGG | 0.370209 | 1_2:-73506137 | None:intergenic |
| TGTCAAGGATCACTGGGTTC+AGG | 0.379129 | 1_2:+73507102 | Msa0091370:CDS |
| GTTTGAAAGAGTTAGATATA+TGG | 0.382885 | 1_2:+73506022 | Msa0091370:CDS |
| TGCCTTGTGCTTGTGAGTTA+GGG | 0.386085 | 1_2:+73506093 | Msa0091370:CDS |
| ATGGATGACCATACCGCATA+TGG | 0.390332 | 1_2:+73506961 | Msa0091370:CDS |
| CAAGAGGAAGACACAGAAAC+TGG | 0.391861 | 1_2:+73506194 | Msa0091370:CDS |
| TTCATTGAAGATATCAGGAT+TGG | 0.401117 | 1_2:+73506919 | Msa0091370:CDS |
| TCCAACTCTCTGCGGACTAT+AGG | 0.403380 | 1_2:-73506827 | None:intergenic |
| TGTACCGTGATCCTTCATAT+TGG | 0.408572 | 1_2:+73506420 | Msa0091370:CDS |
| GTGGGAGGAGGAGGTGTTGG+TGG | 0.412631 | 1_2:-73505336 | None:intergenic |
| TGAATATGAATTGAATCTAA+TGG | 0.421613 | 1_2:-73506143 | None:intergenic |
| CAACTCGCACGTGCGAGATC+GGG | 0.428494 | 1_2:-73505447 | None:intergenic |
| TTGACTATGTCTTCAACATA+TGG | 0.428957 | 1_2:-73506734 | None:intergenic |
| AATGTTATTCTAGTAACGTT+AGG | 0.432609 | 1_2:+73507007 | Msa0091370:CDS |
| GAAGTGGGAGGAGGAGGTGT+TGG | 0.433837 | 1_2:-73505339 | None:intergenic |
| GGAGGAGTGAAGAAGGATAA+AGG | 0.436319 | 1_2:+73506374 | Msa0091370:CDS |
| AGGGCGATTGCACTATTACT+TGG | 0.436982 | 1_2:+73506785 | Msa0091370:CDS |
| TGTTGGTGGTGGGGTTGAGG+TGG | 0.443278 | 1_2:-73505322 | None:intergenic |
| ACATATGGATGAATATGTTC+AGG | 0.451100 | 1_2:-73506719 | None:intergenic |
| GTACCGTGATCCTTCATATT+GGG | 0.452599 | 1_2:+73506421 | Msa0091370:CDS |
| GCAACTCGCACGTGCGAGAT+CGG | 0.461154 | 1_2:-73505448 | None:intergenic |
| AAAACGAGCATTGAAAAGTA+AGG | 0.464218 | 1_2:+73506286 | Msa0091370:CDS |
| ATGTTATTCTAGTAACGTTA+GGG | 0.470489 | 1_2:+73507008 | Msa0091370:CDS |
| ACTGTTGAAGTGGGAGGAGG+AGG | 0.470676 | 1_2:-73505345 | None:intergenic |
| AGATATGACTTATGCAATTG+AGG | 0.475958 | 1_2:+73506226 | Msa0091370:CDS |
| GATTTGGAGGGTGTCGGTGG+AGG | 0.478995 | 1_2:-73505403 | None:intergenic |
| GCCTATAGTCCGCAGAGAGT+TGG | 0.479357 | 1_2:+73506826 | Msa0091370:CDS |
| GGACACATGGAACTCGTAGC+TGG | 0.491706 | 1_2:-73506326 | None:intergenic |
| ATTACTGTTGAAGTGGGAGG+AGG | 0.492526 | 1_2:-73505348 | None:intergenic |
| CAATTGAGGAATTATGGAAA+AGG | 0.495370 | 1_2:+73506240 | Msa0091370:CDS |
| TGCAGACTCAGAGCAACATA+TGG | 0.498994 | 1_2:+73506068 | Msa0091370:CDS |
| CGCACGTGCGAGATCGGGGA+TGG | 0.503094 | 1_2:-73505442 | None:intergenic |
| TTGGAAACTGAAGCAAATGT+TGG | 0.503677 | 1_2:+73505812 | Msa0091370:CDS |
| ATGGTCATCCATCTCTCTCT+AGG | 0.509053 | 1_2:-73506950 | None:intergenic |
| TCATTGAAGATATCAGGATT+GGG | 0.511150 | 1_2:+73506920 | Msa0091370:CDS |
| GTGAGATGTGAAGTCCTCAT+AGG | 0.513869 | 1_2:-73507052 | None:intergenic |
| TGAGATGACTGTTTCTGAAA+AGG | 0.516057 | 1_2:-73506566 | None:intergenic |
| CTAAATCCACAATTTCCGTC+TGG | 0.517145 | 1_2:-73506764 | None:intergenic |
| TTAGGGTAGAGTCTGCTCAT+TGG | 0.518014 | 1_2:+73505793 | Msa0091370:intron |
| GTAAGACGTTCTTTCCTATG+AGG | 0.518276 | 1_2:+73507038 | Msa0091370:CDS |
| GTTGCTCCAGACGGAAATTG+TGG | 0.519456 | 1_2:+73506758 | Msa0091370:CDS |
| TTAGGGAGATATAAAATTAG+TGG | 0.521187 | 1_2:+73506110 | Msa0091370:CDS |
| AGCTTCAGAGATGGCTGAGA+TGG | 0.521738 | 1_2:-73506542 | None:intergenic |
| GATGATTTGGAGGGTGTCGG+TGG | 0.523454 | 1_2:-73505406 | None:intergenic |
| TTACTTGGATATGGTGAAGA+AGG | 0.525116 | 1_2:+73506800 | Msa0091370:CDS |
| CGGTACACATCATATCCCTT+TGG | 0.525228 | 1_2:-73506404 | None:intergenic |
| AAGGAGACTTGTGCAAATGT+TGG | 0.525923 | 1_2:+73505844 | Msa0091370:CDS |
| AATTCTTGTTGTTTCTGGGA+GGG | 0.526433 | 1_2:-73506674 | None:intergenic |
| AACCAAAGGAGGAGTGAAGA+AGG | 0.528411 | 1_2:+73506367 | Msa0091370:CDS |
| GTGCGAGATCGGGGATGGGA+AGG | 0.529104 | 1_2:-73505437 | None:intergenic |
| GCGGAGAAATGAGAATTCAT+TGG | 0.531909 | 1_2:-73505375 | None:intergenic |
| TAGATTCAATTCATATTCAG+TGG | 0.544533 | 1_2:+73506147 | Msa0091370:CDS |
| TCAACATGCTCCCAATATGA+AGG | 0.545622 | 1_2:-73506431 | None:intergenic |
| GGTTCTGGAAGATGATTTGG+AGG | 0.546672 | 1_2:-73505416 | None:intergenic |
| ATAGGAAAGAACGTCTTACT+GGG | 0.547046 | 1_2:-73507034 | None:intergenic |
| GCACGTGCGAGATCGGGGAT+GGG | 0.550351 | 1_2:-73505441 | None:intergenic |
| TGGGTTACGTGATAGCAAAT+CGG | 0.550468 | 1_2:+73506981 | Msa0091370:CDS |
| GGATAAAGGCAAGGTACCAA+AGG | 0.551350 | 1_2:+73506388 | Msa0091370:CDS |
| CACGTAACCCATATGCGGTA+TGG | 0.551900 | 1_2:-73506969 | None:intergenic |
| TGGAAGAAATTAAGCATGGA+AGG | 0.558983 | 1_2:+73506167 | Msa0091370:CDS |
| GATAAAGGCAAGGTACCAAA+GGG | 0.561469 | 1_2:+73506389 | Msa0091370:CDS |
| GATTGAGACAATTGTATCTG+AGG | 0.563758 | 1_2:-73506638 | None:intergenic |
| ATTGAGACAATTGTATCTGA+GGG | 0.565058 | 1_2:-73506637 | None:intergenic |
| ACTCTCAAGGATCGTTAAAG+AGG | 0.568912 | 1_2:+73506468 | Msa0091370:CDS |
| AGACTTGTGCAAATGTTGGA+AGG | 0.570239 | 1_2:+73505848 | Msa0091370:CDS |
| AAGAAGAAGAATTCATGAGA+TGG | 0.574586 | 1_2:-73505290 | None:intergenic |
| AACTCGCACGTGCGAGATCG+GGG | 0.575733 | 1_2:-73505446 | None:intergenic |
| GAAGATGATTTGGAGGGTGT+CGG | 0.579288 | 1_2:-73505409 | None:intergenic |
| AATGAATATTATGACTCTCA+AGG | 0.582105 | 1_2:+73506455 | Msa0091370:CDS |
| GGTGTCGGTGGAGGAAAGTG+CGG | 0.588317 | 1_2:-73505394 | None:intergenic |
| CTCAACAACAATGCGCCTCA+AGG | 0.593630 | 1_2:-73506000 | None:intergenic |
| TGGTGAGATTACTGTTGAAG+TGG | 0.595286 | 1_2:-73505355 | None:intergenic |
| TTGGATATGGTGAAGAAGGA+TGG | 0.599182 | 1_2:+73506804 | Msa0091370:CDS |
| GACTTGTGCAAATGTTGGAA+GGG | 0.599194 | 1_2:+73505849 | Msa0091370:CDS |
| TGGATGACCATACCGCATAT+GGG | 0.602824 | 1_2:+73506962 | Msa0091370:CDS |
| CTCCCTAACTCACAAGCACA+AGG | 0.605122 | 1_2:-73506095 | None:intergenic |
| AAATTCTTGTTGTTTCTGGG+AGG | 0.605631 | 1_2:-73506675 | None:intergenic |
| CCCGACAAAGTTAAAACCAA+AGG | 0.612015 | 1_2:+73506353 | Msa0091370:CDS |
| ATAGTCAATGTTGCTCCAGA+CGG | 0.616226 | 1_2:+73506749 | Msa0091370:CDS |
| GATCTCAGCCTAGAGAGAGA+TGG | 0.617762 | 1_2:+73506942 | Msa0091370:CDS |
| TCAGTGGAAGAAATTAAGCA+TGG | 0.618255 | 1_2:+73506163 | Msa0091370:CDS |
| GACAAAGTTAAAACCAAAGG+AGG | 0.619799 | 1_2:+73506356 | Msa0091370:CDS |
| AAAATGGACTTGTGTGTGCA+TGG | 0.620376 | 1_2:-73505944 | None:intergenic |
| TTTGTCGGGAGGTGGACACA+TGG | 0.626971 | 1_2:-73506339 | None:intergenic |
| AGTGAAGAAGGATAAAGGCA+AGG | 0.632925 | 1_2:+73506379 | Msa0091370:CDS |
| CAAATGTTGGAAAACAGCAA+AGG | 0.639895 | 1_2:+73505825 | Msa0091370:CDS |
| TGAAAAGGTAGCTTCAGAGA+TGG | 0.641717 | 1_2:-73506551 | None:intergenic |
| AAGCATGGAAGGTCAACAAG+AGG | 0.643398 | 1_2:+73506178 | Msa0091370:CDS |
| AAGAAGAATTCATGAGATGG+CGG | 0.645850 | 1_2:-73505287 | None:intergenic |
| TTGTTTCTAGAGCTGCCTTG+AGG | 0.647272 | 1_2:+73505985 | Msa0091370:CDS |
| GATATCGACGAATCGACATG+TGG | 0.648364 | 1_2:+73506044 | Msa0091370:CDS |
| GGTGAGATTACTGTTGAAGT+GGG | 0.649431 | 1_2:-73505354 | None:intergenic |
| TGAGACAATTGTATCTGAGG+GGG | 0.654722 | 1_2:-73506635 | None:intergenic |
| GCTCCCAATATGAAGGATCA+CGG | 0.662241 | 1_2:-73506424 | None:intergenic |
| GCTATCACGTAACCCATATG+CGG | 0.702135 | 1_2:-73506974 | None:intergenic |
| GTTCTGGAAGATGATTTGGA+GGG | 0.706445 | 1_2:-73505415 | None:intergenic |
| TTGAGACAATTGTATCTGAG+GGG | 0.713369 | 1_2:-73506636 | None:intergenic |
| GAGATTACTGTTGAAGTGGG+AGG | 0.723899 | 1_2:-73505351 | None:intergenic |
| TCTCACTATCCAACTCTCTG+CGG | 0.734408 | 1_2:-73506835 | None:intergenic |
| TGTTGTTGCGATGAAGACGA+CGG | 0.735676 | 1_2:+73505255 | Msa0091370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTCAAATTAAAATAAC+TGG | - | chr1_2:73507140-73507159 | None:intergenic | 10.0% |
| !! | TTATTTCAAATTAAAATAAC+TGG | - | chr1_2:73507140-73507159 | None:intergenic | 10.0% |
| !!! | ACATTTTTTTTTAACAACAT+TGG | + | chr1_2:73505740-73505759 | Msa0091370:intron | 15.0% |
| !!! | TGATATTTTGTTTCATATTA+GGG | + | chr1_2:73505776-73505795 | Msa0091370:intron | 15.0% |
| !! | AGTTTCTACAAAAATTTATT+CGG | + | chr1_2:73506872-73506891 | Msa0091370:CDS | 15.0% |
| !!! | ACATTTTTTTTTAACAACAT+TGG | + | chr1_2:73505740-73505759 | Msa0091370:intron | 15.0% |
| !!! | TGATATTTTGTTTCATATTA+GGG | + | chr1_2:73505776-73505795 | Msa0091370:intron | 15.0% |
| !! | AGTTTCTACAAAAATTTATT+CGG | + | chr1_2:73506872-73506891 | Msa0091370:CDS | 15.0% |
| !!! | GTGATATTTTGTTTCATATT+AGG | + | chr1_2:73505775-73505794 | Msa0091370:intron | 20.0% |
| !! | TGAATATGAATTGAATCTAA+TGG | - | chr1_2:73506146-73506165 | None:intergenic | 20.0% |
| !!! | ATAAAATTCTTGTTGTTTCT+GGG | - | chr1_2:73506681-73506700 | None:intergenic | 20.0% |
| !!! | TATAAAATTCTTGTTGTTTC+TGG | - | chr1_2:73506682-73506701 | None:intergenic | 20.0% |
| !!! | AGAAACAACAAGAATTTTAT+AGG | + | chr1_2:73506681-73506700 | Msa0091370:CDS | 20.0% |
| !!! | ACAAGAATTTTATAGGTTAT+TGG | + | chr1_2:73506688-73506707 | Msa0091370:CDS | 20.0% |
| !!! | CAAGAATTTTATAGGTTATT+GGG | + | chr1_2:73506689-73506708 | Msa0091370:CDS | 20.0% |
| !!! | GTGATATTTTGTTTCATATT+AGG | + | chr1_2:73505775-73505794 | Msa0091370:intron | 20.0% |
| !! | TGAATATGAATTGAATCTAA+TGG | - | chr1_2:73506146-73506165 | None:intergenic | 20.0% |
| !!! | ATAAAATTCTTGTTGTTTCT+GGG | - | chr1_2:73506681-73506700 | None:intergenic | 20.0% |
| !!! | TATAAAATTCTTGTTGTTTC+TGG | - | chr1_2:73506682-73506701 | None:intergenic | 20.0% |
| !!! | AGAAACAACAAGAATTTTAT+AGG | + | chr1_2:73506681-73506700 | Msa0091370:CDS | 20.0% |
| !!! | ACAAGAATTTTATAGGTTAT+TGG | + | chr1_2:73506688-73506707 | Msa0091370:CDS | 20.0% |
| !!! | CAAGAATTTTATAGGTTATT+GGG | + | chr1_2:73506689-73506708 | Msa0091370:CDS | 20.0% |
| ! | GTTTGAAAGAGTTAGATATA+TGG | + | chr1_2:73506022-73506041 | Msa0091370:CDS | 25.0% |
| ! | TTAGGGAGATATAAAATTAG+TGG | + | chr1_2:73506110-73506129 | Msa0091370:CDS | 25.0% |
| ! | TGAATTGAATCTAATGGTAT+AGG | - | chr1_2:73506140-73506159 | None:intergenic | 25.0% |
| ! | TAGATTCAATTCATATTCAG+TGG | + | chr1_2:73506147-73506166 | Msa0091370:CDS | 25.0% |
| ! | AATGAATATTATGACTCTCA+AGG | + | chr1_2:73506455-73506474 | Msa0091370:CDS | 25.0% |
| ! | AATGTTATTCTAGTAACGTT+AGG | + | chr1_2:73507007-73507026 | Msa0091370:CDS | 25.0% |
| ! | ATGTTATTCTAGTAACGTTA+GGG | + | chr1_2:73507008-73507027 | Msa0091370:CDS | 25.0% |
| !!! | AGTGTTAGATTTTTTTGCAT+TGG | + | chr1_2:73507076-73507095 | Msa0091370:CDS | 25.0% |
| ! | GTTTGAAAGAGTTAGATATA+TGG | + | chr1_2:73506022-73506041 | Msa0091370:CDS | 25.0% |
| ! | TTAGGGAGATATAAAATTAG+TGG | + | chr1_2:73506110-73506129 | Msa0091370:CDS | 25.0% |
| ! | TGAATTGAATCTAATGGTAT+AGG | - | chr1_2:73506140-73506159 | None:intergenic | 25.0% |
| ! | TAGATTCAATTCATATTCAG+TGG | + | chr1_2:73506147-73506166 | Msa0091370:CDS | 25.0% |
| ! | AATGAATATTATGACTCTCA+AGG | + | chr1_2:73506455-73506474 | Msa0091370:CDS | 25.0% |
| ! | AATGTTATTCTAGTAACGTT+AGG | + | chr1_2:73507007-73507026 | Msa0091370:CDS | 25.0% |
| ! | ATGTTATTCTAGTAACGTTA+GGG | + | chr1_2:73507008-73507027 | Msa0091370:CDS | 25.0% |
| !!! | AGTGTTAGATTTTTTTGCAT+TGG | + | chr1_2:73507076-73507095 | Msa0091370:CDS | 25.0% |
| AAGAAGAAGAATTCATGAGA+TGG | - | chr1_2:73505293-73505312 | None:intergenic | 30.0% | |
| ! | GATAACATCAAGTTGCAATT+AGG | + | chr1_2:73505879-73505898 | Msa0091370:CDS | 30.0% |
| ! | CCACGCAATTTTTCATAAAA+TGG | - | chr1_2:73505963-73505982 | None:intergenic | 30.0% |
| ! | CCATTTTATGAAAAATTGCG+TGG | + | chr1_2:73505960-73505979 | Msa0091370:CDS | 30.0% |
| AGATATGACTTATGCAATTG+AGG | + | chr1_2:73506226-73506245 | Msa0091370:CDS | 30.0% | |
| CTTATGCAATTGAGGAATTA+TGG | + | chr1_2:73506234-73506253 | Msa0091370:CDS | 30.0% | |
| CAATTGAGGAATTATGGAAA+AGG | + | chr1_2:73506240-73506259 | Msa0091370:CDS | 30.0% | |
| AGGAATTATGGAAAAGGTTT+CGG | + | chr1_2:73506246-73506265 | Msa0091370:CDS | 30.0% | |
| !! | AAAACGAGCATTGAAAAGTA+AGG | + | chr1_2:73506286-73506305 | Msa0091370:CDS | 30.0% |
| !!! | TCCTTTGGTTTTAACTTTGT+CGG | - | chr1_2:73506357-73506376 | None:intergenic | 30.0% |
| !! | TTAGATGGTAGATTTTGAGA+TGG | - | chr1_2:73506593-73506612 | None:intergenic | 30.0% |
| !!! | TGAGATGGTTGTTTTTTAGA+TGG | - | chr1_2:73506608-73506627 | None:intergenic | 30.0% |
| ATTGAGACAATTGTATCTGA+GGG | - | chr1_2:73506640-73506659 | None:intergenic | 30.0% | |
| ACATATGGATGAATATGTTC+AGG | - | chr1_2:73506722-73506741 | None:intergenic | 30.0% | |
| TTGACTATGTCTTCAACATA+TGG | - | chr1_2:73506737-73506756 | None:intergenic | 30.0% | |
| ATTGCACTATTACTTGGATA+TGG | + | chr1_2:73506791-73506810 | Msa0091370:CDS | 30.0% | |
| AGAGATTCATTGAAGATATC+AGG | + | chr1_2:73506914-73506933 | Msa0091370:CDS | 30.0% | |
| TTCATTGAAGATATCAGGAT+TGG | + | chr1_2:73506919-73506938 | Msa0091370:CDS | 30.0% | |
| TCATTGAAGATATCAGGATT+GGG | + | chr1_2:73506920-73506939 | Msa0091370:CDS | 30.0% | |
| !!! | TTTTTGCATTGGTTTTGTCA+AGG | + | chr1_2:73507087-73507106 | Msa0091370:CDS | 30.0% |
| AAGAAGAAGAATTCATGAGA+TGG | - | chr1_2:73505293-73505312 | None:intergenic | 30.0% | |
| ! | GATAACATCAAGTTGCAATT+AGG | + | chr1_2:73505879-73505898 | Msa0091370:CDS | 30.0% |
| ! | CCACGCAATTTTTCATAAAA+TGG | - | chr1_2:73505963-73505982 | None:intergenic | 30.0% |
| ! | CCATTTTATGAAAAATTGCG+TGG | + | chr1_2:73505960-73505979 | Msa0091370:CDS | 30.0% |
| AGATATGACTTATGCAATTG+AGG | + | chr1_2:73506226-73506245 | Msa0091370:CDS | 30.0% | |
| CTTATGCAATTGAGGAATTA+TGG | + | chr1_2:73506234-73506253 | Msa0091370:CDS | 30.0% | |
| CAATTGAGGAATTATGGAAA+AGG | + | chr1_2:73506240-73506259 | Msa0091370:CDS | 30.0% | |
| AGGAATTATGGAAAAGGTTT+CGG | + | chr1_2:73506246-73506265 | Msa0091370:CDS | 30.0% | |
| !! | AAAACGAGCATTGAAAAGTA+AGG | + | chr1_2:73506286-73506305 | Msa0091370:CDS | 30.0% |
| !!! | TCCTTTGGTTTTAACTTTGT+CGG | - | chr1_2:73506357-73506376 | None:intergenic | 30.0% |
| !! | TTAGATGGTAGATTTTGAGA+TGG | - | chr1_2:73506593-73506612 | None:intergenic | 30.0% |
| !!! | TGAGATGGTTGTTTTTTAGA+TGG | - | chr1_2:73506608-73506627 | None:intergenic | 30.0% |
| ATTGAGACAATTGTATCTGA+GGG | - | chr1_2:73506640-73506659 | None:intergenic | 30.0% | |
| ACATATGGATGAATATGTTC+AGG | - | chr1_2:73506722-73506741 | None:intergenic | 30.0% | |
| TTGACTATGTCTTCAACATA+TGG | - | chr1_2:73506737-73506756 | None:intergenic | 30.0% | |
| ATTGCACTATTACTTGGATA+TGG | + | chr1_2:73506791-73506810 | Msa0091370:CDS | 30.0% | |
| AGAGATTCATTGAAGATATC+AGG | + | chr1_2:73506914-73506933 | Msa0091370:CDS | 30.0% | |
| TTCATTGAAGATATCAGGAT+TGG | + | chr1_2:73506919-73506938 | Msa0091370:CDS | 30.0% | |
| TCATTGAAGATATCAGGATT+GGG | + | chr1_2:73506920-73506939 | Msa0091370:CDS | 30.0% | |
| !!! | TTTTTGCATTGGTTTTGTCA+AGG | + | chr1_2:73507087-73507106 | Msa0091370:CDS | 30.0% |
| AAGAAGAATTCATGAGATGG+CGG | - | chr1_2:73505290-73505309 | None:intergenic | 35.0% | |
| TTGGAAACTGAAGCAAATGT+TGG | + | chr1_2:73505812-73505831 | Msa0091370:CDS | 35.0% | |
| CAAATGTTGGAAAACAGCAA+AGG | + | chr1_2:73505825-73505844 | Msa0091370:CDS | 35.0% | |
| TCAGTGGAAGAAATTAAGCA+TGG | + | chr1_2:73506163-73506182 | Msa0091370:CDS | 35.0% | |
| TGGAAGAAATTAAGCATGGA+AGG | + | chr1_2:73506167-73506186 | Msa0091370:CDS | 35.0% | |
| TTTCGGTCACTTGACATTAT+TGG | + | chr1_2:73506263-73506282 | Msa0091370:CDS | 35.0% | |
| !!! | CCTTTGGTTTTAACTTTGTC+GGG | - | chr1_2:73506356-73506375 | None:intergenic | 35.0% |
| GACAAAGTTAAAACCAAAGG+AGG | + | chr1_2:73506356-73506375 | Msa0091370:CDS | 35.0% | |
| !! | TGATTGCTTTTGAGAGGATT+GGG | - | chr1_2:73506510-73506529 | None:intergenic | 35.0% |
| !! | ATGATTGCTTTTGAGAGGAT+TGG | - | chr1_2:73506511-73506530 | None:intergenic | 35.0% |
| !! | TTGAGATGATTGCTTTTGAG+AGG | - | chr1_2:73506516-73506535 | None:intergenic | 35.0% |
| !! | TGAGATGACTGTTTCTGAAA+AGG | - | chr1_2:73506569-73506588 | None:intergenic | 35.0% |
| TTGAGACAATTGTATCTGAG+GGG | - | chr1_2:73506639-73506658 | None:intergenic | 35.0% | |
| GATTGAGACAATTGTATCTG+AGG | - | chr1_2:73506641-73506660 | None:intergenic | 35.0% | |
| !! | AATTCTTGTTGTTTCTGGGA+GGG | - | chr1_2:73506677-73506696 | None:intergenic | 35.0% |
| !! | AAATTCTTGTTGTTTCTGGG+AGG | - | chr1_2:73506678-73506697 | None:intergenic | 35.0% |
| AGACGGAAATTGTGGATTTA+GGG | + | chr1_2:73506766-73506785 | Msa0091370:CDS | 35.0% | |
| TTACTTGGATATGGTGAAGA+AGG | + | chr1_2:73506800-73506819 | Msa0091370:CDS | 35.0% | |
| ATAGGAAAGAACGTCTTACT+GGG | - | chr1_2:73507037-73507056 | None:intergenic | 35.0% | |
| AAGAAGAATTCATGAGATGG+CGG | - | chr1_2:73505290-73505309 | None:intergenic | 35.0% | |
| TTGGAAACTGAAGCAAATGT+TGG | + | chr1_2:73505812-73505831 | Msa0091370:CDS | 35.0% | |
| CAAATGTTGGAAAACAGCAA+AGG | + | chr1_2:73505825-73505844 | Msa0091370:CDS | 35.0% | |
| TCAGTGGAAGAAATTAAGCA+TGG | + | chr1_2:73506163-73506182 | Msa0091370:CDS | 35.0% | |
| TGGAAGAAATTAAGCATGGA+AGG | + | chr1_2:73506167-73506186 | Msa0091370:CDS | 35.0% | |
| TTTCGGTCACTTGACATTAT+TGG | + | chr1_2:73506263-73506282 | Msa0091370:CDS | 35.0% | |
| !!! | CCTTTGGTTTTAACTTTGTC+GGG | - | chr1_2:73506356-73506375 | None:intergenic | 35.0% |
| GACAAAGTTAAAACCAAAGG+AGG | + | chr1_2:73506356-73506375 | Msa0091370:CDS | 35.0% | |
| !! | TGATTGCTTTTGAGAGGATT+GGG | - | chr1_2:73506510-73506529 | None:intergenic | 35.0% |
| !! | ATGATTGCTTTTGAGAGGAT+TGG | - | chr1_2:73506511-73506530 | None:intergenic | 35.0% |
| !! | TTGAGATGATTGCTTTTGAG+AGG | - | chr1_2:73506516-73506535 | None:intergenic | 35.0% |
| !! | TGAGATGACTGTTTCTGAAA+AGG | - | chr1_2:73506569-73506588 | None:intergenic | 35.0% |
| TTGAGACAATTGTATCTGAG+GGG | - | chr1_2:73506639-73506658 | None:intergenic | 35.0% | |
| GATTGAGACAATTGTATCTG+AGG | - | chr1_2:73506641-73506660 | None:intergenic | 35.0% | |
| !! | AATTCTTGTTGTTTCTGGGA+GGG | - | chr1_2:73506677-73506696 | None:intergenic | 35.0% |
| !! | AAATTCTTGTTGTTTCTGGG+AGG | - | chr1_2:73506678-73506697 | None:intergenic | 35.0% |
| AGACGGAAATTGTGGATTTA+GGG | + | chr1_2:73506766-73506785 | Msa0091370:CDS | 35.0% | |
| TTACTTGGATATGGTGAAGA+AGG | + | chr1_2:73506800-73506819 | Msa0091370:CDS | 35.0% | |
| ATAGGAAAGAACGTCTTACT+GGG | - | chr1_2:73507037-73507056 | None:intergenic | 35.0% | |
| GGTGAGATTACTGTTGAAGT+GGG | - | chr1_2:73505357-73505376 | None:intergenic | 40.0% | |
| TGGTGAGATTACTGTTGAAG+TGG | - | chr1_2:73505358-73505377 | None:intergenic | 40.0% | |
| GCGGAGAAATGAGAATTCAT+TGG | - | chr1_2:73505378-73505397 | None:intergenic | 40.0% | |
| !! | GTTCTGGAAGATGATTTGGA+GGG | - | chr1_2:73505418-73505437 | None:intergenic | 40.0% |
| !! | GAAGGTTCTGGAAGATGATT+TGG | - | chr1_2:73505422-73505441 | None:intergenic | 40.0% |
| ACTACGTCCTTCAATTTCCA+CGG | - | chr1_2:73505537-73505556 | None:intergenic | 40.0% | |
| TGGAAATTGAAGGACGTAGT+TGG | + | chr1_2:73505537-73505556 | Msa0091370:intron | 40.0% | |
| ! | TCCAGAAGCTTCTAGAAATC+GGG | - | chr1_2:73505566-73505585 | None:intergenic | 40.0% |
| ! | CTCCAGAAGCTTCTAGAAAT+CGG | - | chr1_2:73505567-73505586 | None:intergenic | 40.0% |
| AAGGAGACTTGTGCAAATGT+TGG | + | chr1_2:73505844-73505863 | Msa0091370:CDS | 40.0% | |
| AGACTTGTGCAAATGTTGGA+AGG | + | chr1_2:73505848-73505867 | Msa0091370:CDS | 40.0% | |
| GACTTGTGCAAATGTTGGAA+GGG | + | chr1_2:73505849-73505868 | Msa0091370:CDS | 40.0% | |
| ! | AAAATGGACTTGTGTGTGCA+TGG | - | chr1_2:73505947-73505966 | None:intergenic | 40.0% |
| !!! | TTGGTTTTAACTTTGTCGGG+AGG | - | chr1_2:73506353-73506372 | None:intergenic | 40.0% |
| CCCGACAAAGTTAAAACCAA+AGG | + | chr1_2:73506353-73506372 | Msa0091370:CDS | 40.0% | |
| AGTGAAGAAGGATAAAGGCA+AGG | + | chr1_2:73506379-73506398 | Msa0091370:CDS | 40.0% | |
| ! | GATAAAGGCAAGGTACCAAA+GGG | + | chr1_2:73506389-73506408 | Msa0091370:CDS | 40.0% |
| TGTACCGTGATCCTTCATAT+TGG | + | chr1_2:73506420-73506439 | Msa0091370:CDS | 40.0% | |
| GTACCGTGATCCTTCATATT+GGG | + | chr1_2:73506421-73506440 | Msa0091370:CDS | 40.0% | |
| TCAACATGCTCCCAATATGA+AGG | - | chr1_2:73506434-73506453 | None:intergenic | 40.0% | |
| ACTCTCAAGGATCGTTAAAG+AGG | + | chr1_2:73506468-73506487 | Msa0091370:CDS | 40.0% | |
| TGAAAAGGTAGCTTCAGAGA+TGG | - | chr1_2:73506554-73506573 | None:intergenic | 40.0% | |
| TGAGACAATTGTATCTGAGG+GGG | - | chr1_2:73506638-73506657 | None:intergenic | 40.0% | |
| ATAGTCAATGTTGCTCCAGA+CGG | + | chr1_2:73506749-73506768 | Msa0091370:CDS | 40.0% | |
| CTAAATCCACAATTTCCGTC+TGG | - | chr1_2:73506767-73506786 | None:intergenic | 40.0% | |
| CAGACGGAAATTGTGGATTT+AGG | + | chr1_2:73506765-73506784 | Msa0091370:CDS | 40.0% | |
| TTGGATATGGTGAAGAAGGA+TGG | + | chr1_2:73506804-73506823 | Msa0091370:CDS | 40.0% | |
| TGGGTTACGTGATAGCAAAT+CGG | + | chr1_2:73506981-73507000 | Msa0091370:CDS | 40.0% | |
| CATAGGAAAGAACGTCTTAC+TGG | - | chr1_2:73507038-73507057 | None:intergenic | 40.0% | |
| GTAAGACGTTCTTTCCTATG+AGG | + | chr1_2:73507038-73507057 | Msa0091370:CDS | 40.0% | |
| !!! | TTGGTTTTGTCAAGGATCAC+TGG | + | chr1_2:73507095-73507114 | Msa0091370:CDS | 40.0% |
| !!! | TGGTTTTGTCAAGGATCACT+GGG | + | chr1_2:73507096-73507115 | Msa0091370:CDS | 40.0% |
| GGTGAGATTACTGTTGAAGT+GGG | - | chr1_2:73505357-73505376 | None:intergenic | 40.0% | |
| TGGTGAGATTACTGTTGAAG+TGG | - | chr1_2:73505358-73505377 | None:intergenic | 40.0% | |
| GCGGAGAAATGAGAATTCAT+TGG | - | chr1_2:73505378-73505397 | None:intergenic | 40.0% | |
| !! | GTTCTGGAAGATGATTTGGA+GGG | - | chr1_2:73505418-73505437 | None:intergenic | 40.0% |
| !! | GAAGGTTCTGGAAGATGATT+TGG | - | chr1_2:73505422-73505441 | None:intergenic | 40.0% |
| ACTACGTCCTTCAATTTCCA+CGG | - | chr1_2:73505537-73505556 | None:intergenic | 40.0% | |
| TGGAAATTGAAGGACGTAGT+TGG | + | chr1_2:73505537-73505556 | Msa0091370:intron | 40.0% | |
| ! | TCCAGAAGCTTCTAGAAATC+GGG | - | chr1_2:73505566-73505585 | None:intergenic | 40.0% |
| ! | CTCCAGAAGCTTCTAGAAAT+CGG | - | chr1_2:73505567-73505586 | None:intergenic | 40.0% |
| AAGGAGACTTGTGCAAATGT+TGG | + | chr1_2:73505844-73505863 | Msa0091370:CDS | 40.0% | |
| AGACTTGTGCAAATGTTGGA+AGG | + | chr1_2:73505848-73505867 | Msa0091370:CDS | 40.0% | |
| GACTTGTGCAAATGTTGGAA+GGG | + | chr1_2:73505849-73505868 | Msa0091370:CDS | 40.0% | |
| ! | AAAATGGACTTGTGTGTGCA+TGG | - | chr1_2:73505947-73505966 | None:intergenic | 40.0% |
| !!! | TTGGTTTTAACTTTGTCGGG+AGG | - | chr1_2:73506353-73506372 | None:intergenic | 40.0% |
| CCCGACAAAGTTAAAACCAA+AGG | + | chr1_2:73506353-73506372 | Msa0091370:CDS | 40.0% | |
| AGTGAAGAAGGATAAAGGCA+AGG | + | chr1_2:73506379-73506398 | Msa0091370:CDS | 40.0% | |
| ! | GATAAAGGCAAGGTACCAAA+GGG | + | chr1_2:73506389-73506408 | Msa0091370:CDS | 40.0% |
| TGTACCGTGATCCTTCATAT+TGG | + | chr1_2:73506420-73506439 | Msa0091370:CDS | 40.0% | |
| GTACCGTGATCCTTCATATT+GGG | + | chr1_2:73506421-73506440 | Msa0091370:CDS | 40.0% | |
| TCAACATGCTCCCAATATGA+AGG | - | chr1_2:73506434-73506453 | None:intergenic | 40.0% | |
| ACTCTCAAGGATCGTTAAAG+AGG | + | chr1_2:73506468-73506487 | Msa0091370:CDS | 40.0% | |
| TGAAAAGGTAGCTTCAGAGA+TGG | - | chr1_2:73506554-73506573 | None:intergenic | 40.0% | |
| TGAGACAATTGTATCTGAGG+GGG | - | chr1_2:73506638-73506657 | None:intergenic | 40.0% | |
| ATAGTCAATGTTGCTCCAGA+CGG | + | chr1_2:73506749-73506768 | Msa0091370:CDS | 40.0% | |
| CTAAATCCACAATTTCCGTC+TGG | - | chr1_2:73506767-73506786 | None:intergenic | 40.0% | |
| CAGACGGAAATTGTGGATTT+AGG | + | chr1_2:73506765-73506784 | Msa0091370:CDS | 40.0% | |
| TTGGATATGGTGAAGAAGGA+TGG | + | chr1_2:73506804-73506823 | Msa0091370:CDS | 40.0% | |
| TGGGTTACGTGATAGCAAAT+CGG | + | chr1_2:73506981-73507000 | Msa0091370:CDS | 40.0% | |
| CATAGGAAAGAACGTCTTAC+TGG | - | chr1_2:73507038-73507057 | None:intergenic | 40.0% | |
| GTAAGACGTTCTTTCCTATG+AGG | + | chr1_2:73507038-73507057 | Msa0091370:CDS | 40.0% | |
| !!! | TTGGTTTTGTCAAGGATCAC+TGG | + | chr1_2:73507095-73507114 | Msa0091370:CDS | 40.0% |
| !!! | TGGTTTTGTCAAGGATCACT+GGG | + | chr1_2:73507096-73507115 | Msa0091370:CDS | 40.0% |
| TGTTGTTGCGATGAAGACGA+CGG | + | chr1_2:73505255-73505274 | Msa0091370:CDS | 45.0% | |
| ATTACTGTTGAAGTGGGAGG+AGG | - | chr1_2:73505351-73505370 | None:intergenic | 45.0% | |
| GAGATTACTGTTGAAGTGGG+AGG | - | chr1_2:73505354-73505373 | None:intergenic | 45.0% | |
| ! | GAAGATGATTTGGAGGGTGT+CGG | - | chr1_2:73505412-73505431 | None:intergenic | 45.0% |
| !! | GGTTCTGGAAGATGATTTGG+AGG | - | chr1_2:73505419-73505438 | None:intergenic | 45.0% |
| CTTAGCACCGTGGAAATTGA+AGG | + | chr1_2:73505527-73505546 | Msa0091370:intron | 45.0% | |
| ! | ACCCGATTTCTAGAAGCTTC+TGG | + | chr1_2:73505562-73505581 | Msa0091370:intron | 45.0% |
| TTAGGGTAGAGTCTGCTCAT+TGG | + | chr1_2:73505793-73505812 | Msa0091370:intron | 45.0% | |
| !! | TTGTTTCTAGAGCTGCCTTG+AGG | + | chr1_2:73505985-73506004 | Msa0091370:CDS | 45.0% |
| GATATCGACGAATCGACATG+TGG | + | chr1_2:73506044-73506063 | Msa0091370:CDS | 45.0% | |
| TGCAGACTCAGAGCAACATA+TGG | + | chr1_2:73506068-73506087 | Msa0091370:CDS | 45.0% | |
| TGCCTTGTGCTTGTGAGTTA+GGG | + | chr1_2:73506093-73506112 | Msa0091370:CDS | 45.0% | |
| AAGCATGGAAGGTCAACAAG+AGG | + | chr1_2:73506178-73506197 | Msa0091370:CDS | 45.0% | |
| CAAGAGGAAGACACAGAAAC+TGG | + | chr1_2:73506194-73506213 | Msa0091370:CDS | 45.0% | |
| !!! | GTTTTAACTTTGTCGGGAGG+TGG | - | chr1_2:73506350-73506369 | None:intergenic | 45.0% |
| AACCAAAGGAGGAGTGAAGA+AGG | + | chr1_2:73506367-73506386 | Msa0091370:CDS | 45.0% | |
| ATCCTTCTTCACTCCTCCTT+TGG | - | chr1_2:73506372-73506391 | None:intergenic | 45.0% | |
| GGAGGAGTGAAGAAGGATAA+AGG | + | chr1_2:73506374-73506393 | Msa0091370:CDS | 45.0% | |
| ! | GGATAAAGGCAAGGTACCAA+AGG | + | chr1_2:73506388-73506407 | Msa0091370:CDS | 45.0% |
| CGGTACACATCATATCCCTT+TGG | - | chr1_2:73506407-73506426 | None:intergenic | 45.0% | |
| GCTCCCAATATGAAGGATCA+CGG | - | chr1_2:73506427-73506446 | None:intergenic | 45.0% | |
| AGGGCGATTGCACTATTACT+TGG | + | chr1_2:73506785-73506804 | Msa0091370:CDS | 45.0% | |
| TCTCACTATCCAACTCTCTG+CGG | - | chr1_2:73506838-73506857 | None:intergenic | 45.0% | |
| ATGGTCATCCATCTCTCTCT+AGG | - | chr1_2:73506953-73506972 | None:intergenic | 45.0% | |
| ATGGATGACCATACCGCATA+TGG | + | chr1_2:73506961-73506980 | Msa0091370:CDS | 45.0% | |
| TGGATGACCATACCGCATAT+GGG | + | chr1_2:73506962-73506981 | Msa0091370:CDS | 45.0% | |
| GCTATCACGTAACCCATATG+CGG | - | chr1_2:73506977-73506996 | None:intergenic | 45.0% | |
| GTGAGATGTGAAGTCCTCAT+AGG | - | chr1_2:73507055-73507074 | None:intergenic | 45.0% | |
| TGTTGTTGCGATGAAGACGA+CGG | + | chr1_2:73505255-73505274 | Msa0091370:CDS | 45.0% | |
| ATTACTGTTGAAGTGGGAGG+AGG | - | chr1_2:73505351-73505370 | None:intergenic | 45.0% | |
| GAGATTACTGTTGAAGTGGG+AGG | - | chr1_2:73505354-73505373 | None:intergenic | 45.0% | |
| ! | GAAGATGATTTGGAGGGTGT+CGG | - | chr1_2:73505412-73505431 | None:intergenic | 45.0% |
| !! | GGTTCTGGAAGATGATTTGG+AGG | - | chr1_2:73505419-73505438 | None:intergenic | 45.0% |
| CTTAGCACCGTGGAAATTGA+AGG | + | chr1_2:73505527-73505546 | Msa0091370:intron | 45.0% | |
| ! | ACCCGATTTCTAGAAGCTTC+TGG | + | chr1_2:73505562-73505581 | Msa0091370:intron | 45.0% |
| TTAGGGTAGAGTCTGCTCAT+TGG | + | chr1_2:73505793-73505812 | Msa0091370:intron | 45.0% | |
| !! | TTGTTTCTAGAGCTGCCTTG+AGG | + | chr1_2:73505985-73506004 | Msa0091370:CDS | 45.0% |
| GATATCGACGAATCGACATG+TGG | + | chr1_2:73506044-73506063 | Msa0091370:CDS | 45.0% | |
| TGCAGACTCAGAGCAACATA+TGG | + | chr1_2:73506068-73506087 | Msa0091370:CDS | 45.0% | |
| TGCCTTGTGCTTGTGAGTTA+GGG | + | chr1_2:73506093-73506112 | Msa0091370:CDS | 45.0% | |
| AAGCATGGAAGGTCAACAAG+AGG | + | chr1_2:73506178-73506197 | Msa0091370:CDS | 45.0% | |
| CAAGAGGAAGACACAGAAAC+TGG | + | chr1_2:73506194-73506213 | Msa0091370:CDS | 45.0% | |
| !!! | GTTTTAACTTTGTCGGGAGG+TGG | - | chr1_2:73506350-73506369 | None:intergenic | 45.0% |
| AACCAAAGGAGGAGTGAAGA+AGG | + | chr1_2:73506367-73506386 | Msa0091370:CDS | 45.0% | |
| ATCCTTCTTCACTCCTCCTT+TGG | - | chr1_2:73506372-73506391 | None:intergenic | 45.0% | |
| GGAGGAGTGAAGAAGGATAA+AGG | + | chr1_2:73506374-73506393 | Msa0091370:CDS | 45.0% | |
| ! | GGATAAAGGCAAGGTACCAA+AGG | + | chr1_2:73506388-73506407 | Msa0091370:CDS | 45.0% |
| CGGTACACATCATATCCCTT+TGG | - | chr1_2:73506407-73506426 | None:intergenic | 45.0% | |
| GCTCCCAATATGAAGGATCA+CGG | - | chr1_2:73506427-73506446 | None:intergenic | 45.0% | |
| AGGGCGATTGCACTATTACT+TGG | + | chr1_2:73506785-73506804 | Msa0091370:CDS | 45.0% | |
| TCTCACTATCCAACTCTCTG+CGG | - | chr1_2:73506838-73506857 | None:intergenic | 45.0% | |
| ATGGTCATCCATCTCTCTCT+AGG | - | chr1_2:73506953-73506972 | None:intergenic | 45.0% | |
| ATGGATGACCATACCGCATA+TGG | + | chr1_2:73506961-73506980 | Msa0091370:CDS | 45.0% | |
| TGGATGACCATACCGCATAT+GGG | + | chr1_2:73506962-73506981 | Msa0091370:CDS | 45.0% | |
| GCTATCACGTAACCCATATG+CGG | - | chr1_2:73506977-73506996 | None:intergenic | 45.0% | |
| GTGAGATGTGAAGTCCTCAT+AGG | - | chr1_2:73507055-73507074 | None:intergenic | 45.0% | |
| GAACTCGGTAGCCTCACAAA+GGG | + | chr1_2:73505485-73505504 | Msa0091370:intron | 50.0% | |
| GGTTACCATCTCCCTTTGTG+AGG | - | chr1_2:73505499-73505518 | None:intergenic | 50.0% | |
| CTCAACAACAATGCGCCTCA+AGG | - | chr1_2:73506003-73506022 | None:intergenic | 50.0% | |
| CTGCCTTGTGCTTGTGAGTT+AGG | + | chr1_2:73506092-73506111 | Msa0091370:CDS | 50.0% | |
| CTCCCTAACTCACAAGCACA+AGG | - | chr1_2:73506098-73506117 | None:intergenic | 50.0% | |
| AGCTTCAGAGATGGCTGAGA+TGG | - | chr1_2:73506545-73506564 | None:intergenic | 50.0% | |
| ! | TGAGGGGGTAGTTTCTGAGA+TGG | - | chr1_2:73506623-73506642 | None:intergenic | 50.0% |
| GTTGCTCCAGACGGAAATTG+TGG | + | chr1_2:73506758-73506777 | Msa0091370:CDS | 50.0% | |
| ! | TCCAACTCTCTGCGGACTAT+AGG | - | chr1_2:73506830-73506849 | None:intergenic | 50.0% |
| GATCTCAGCCTAGAGAGAGA+TGG | + | chr1_2:73506942-73506961 | Msa0091370:CDS | 50.0% | |
| CACGTAACCCATATGCGGTA+TGG | - | chr1_2:73506972-73506991 | None:intergenic | 50.0% | |
| TGTCAAGGATCACTGGGTTC+AGG | + | chr1_2:73507102-73507121 | Msa0091370:CDS | 50.0% | |
| GAACTCGGTAGCCTCACAAA+GGG | + | chr1_2:73505485-73505504 | Msa0091370:intron | 50.0% | |
| GGTTACCATCTCCCTTTGTG+AGG | - | chr1_2:73505499-73505518 | None:intergenic | 50.0% | |
| CTCAACAACAATGCGCCTCA+AGG | - | chr1_2:73506003-73506022 | None:intergenic | 50.0% | |
| CTGCCTTGTGCTTGTGAGTT+AGG | + | chr1_2:73506092-73506111 | Msa0091370:CDS | 50.0% | |
| CTCCCTAACTCACAAGCACA+AGG | - | chr1_2:73506098-73506117 | None:intergenic | 50.0% | |
| AGCTTCAGAGATGGCTGAGA+TGG | - | chr1_2:73506545-73506564 | None:intergenic | 50.0% | |
| ! | TGAGGGGGTAGTTTCTGAGA+TGG | - | chr1_2:73506623-73506642 | None:intergenic | 50.0% |
| GTTGCTCCAGACGGAAATTG+TGG | + | chr1_2:73506758-73506777 | Msa0091370:CDS | 50.0% | |
| ! | TCCAACTCTCTGCGGACTAT+AGG | - | chr1_2:73506830-73506849 | None:intergenic | 50.0% |
| GATCTCAGCCTAGAGAGAGA+TGG | + | chr1_2:73506942-73506961 | Msa0091370:CDS | 50.0% | |
| CACGTAACCCATATGCGGTA+TGG | - | chr1_2:73506972-73506991 | None:intergenic | 50.0% | |
| TGTCAAGGATCACTGGGTTC+AGG | + | chr1_2:73507102-73507121 | Msa0091370:CDS | 50.0% | |
| ACTGTTGAAGTGGGAGGAGG+AGG | - | chr1_2:73505348-73505367 | None:intergenic | 55.0% | |
| !! | GATGATTTGGAGGGTGTCGG+TGG | - | chr1_2:73505409-73505428 | None:intergenic | 55.0% |
| AGGCTACCGAGTTCCAGACT+CGG | - | chr1_2:73505479-73505498 | None:intergenic | 55.0% | |
| GGAACTCGGTAGCCTCACAA+AGG | + | chr1_2:73505484-73505503 | Msa0091370:intron | 55.0% | |
| GGTAGCCTCACAAAGGGAGA+TGG | + | chr1_2:73505491-73505510 | Msa0091370:intron | 55.0% | |
| ! | CCACGGTGCTAAGAAAGCTC+TGG | - | chr1_2:73505520-73505539 | None:intergenic | 55.0% |
| CCAGAGCTTTCTTAGCACCG+TGG | + | chr1_2:73505517-73505536 | Msa0091370:intron | 55.0% | |
| GGACACATGGAACTCGTAGC+TGG | - | chr1_2:73506329-73506348 | None:intergenic | 55.0% | |
| TTTGTCGGGAGGTGGACACA+TGG | - | chr1_2:73506342-73506361 | None:intergenic | 55.0% | |
| GCCTATAGTCCGCAGAGAGT+TGG | + | chr1_2:73506826-73506845 | Msa0091370:CDS | 55.0% | |
| ACTGTTGAAGTGGGAGGAGG+AGG | - | chr1_2:73505348-73505367 | None:intergenic | 55.0% | |
| !! | GATGATTTGGAGGGTGTCGG+TGG | - | chr1_2:73505409-73505428 | None:intergenic | 55.0% |
| AGGCTACCGAGTTCCAGACT+CGG | - | chr1_2:73505479-73505498 | None:intergenic | 55.0% | |
| GGAACTCGGTAGCCTCACAA+AGG | + | chr1_2:73505484-73505503 | Msa0091370:intron | 55.0% | |
| GGTAGCCTCACAAAGGGAGA+TGG | + | chr1_2:73505491-73505510 | Msa0091370:intron | 55.0% | |
| ! | CCACGGTGCTAAGAAAGCTC+TGG | - | chr1_2:73505520-73505539 | None:intergenic | 55.0% |
| CCAGAGCTTTCTTAGCACCG+TGG | + | chr1_2:73505517-73505536 | Msa0091370:intron | 55.0% | |
| GGACACATGGAACTCGTAGC+TGG | - | chr1_2:73506329-73506348 | None:intergenic | 55.0% | |
| TTTGTCGGGAGGTGGACACA+TGG | - | chr1_2:73506342-73506361 | None:intergenic | 55.0% | |
| GCCTATAGTCCGCAGAGAGT+TGG | + | chr1_2:73506826-73506845 | Msa0091370:CDS | 55.0% | |
| !! | TGTTGGTGGTGGGGTTGAGG+TGG | - | chr1_2:73505325-73505344 | None:intergenic | 60.0% |
| !! | AGGTGTTGGTGGTGGGGTTG+AGG | - | chr1_2:73505328-73505347 | None:intergenic | 60.0% |
| !! | AGGAGGAGGTGTTGGTGGTG+GGG | - | chr1_2:73505334-73505353 | None:intergenic | 60.0% |
| !! | GAGGAGGAGGTGTTGGTGGT+GGG | - | chr1_2:73505335-73505354 | None:intergenic | 60.0% |
| ! | GAAGTGGGAGGAGGAGGTGT+TGG | - | chr1_2:73505342-73505361 | None:intergenic | 60.0% |
| !! | GGTGTCGGTGGAGGAAAGTG+CGG | - | chr1_2:73505397-73505416 | None:intergenic | 60.0% |
| !! | GATTTGGAGGGTGTCGGTGG+AGG | - | chr1_2:73505406-73505425 | None:intergenic | 60.0% |
| GATCGGGGATGGGAAGGTTC+TGG | - | chr1_2:73505434-73505453 | None:intergenic | 60.0% | |
| AACTCGCACGTGCGAGATCG+GGG | - | chr1_2:73505449-73505468 | None:intergenic | 60.0% | |
| CAACTCGCACGTGCGAGATC+GGG | - | chr1_2:73505450-73505469 | None:intergenic | 60.0% | |
| GCAACTCGCACGTGCGAGAT+CGG | - | chr1_2:73505451-73505470 | None:intergenic | 60.0% | |
| ! | CGTCTGCCGAGTCTGGAACT+CGG | + | chr1_2:73505470-73505489 | Msa0091370:intron | 60.0% |
| !! | TGTTGGTGGTGGGGTTGAGG+TGG | - | chr1_2:73505325-73505344 | None:intergenic | 60.0% |
| !! | AGGTGTTGGTGGTGGGGTTG+AGG | - | chr1_2:73505328-73505347 | None:intergenic | 60.0% |
| !! | AGGAGGAGGTGTTGGTGGTG+GGG | - | chr1_2:73505334-73505353 | None:intergenic | 60.0% |
| !! | GAGGAGGAGGTGTTGGTGGT+GGG | - | chr1_2:73505335-73505354 | None:intergenic | 60.0% |
| ! | GAAGTGGGAGGAGGAGGTGT+TGG | - | chr1_2:73505342-73505361 | None:intergenic | 60.0% |
| !! | GGTGTCGGTGGAGGAAAGTG+CGG | - | chr1_2:73505397-73505416 | None:intergenic | 60.0% |
| !! | GATTTGGAGGGTGTCGGTGG+AGG | - | chr1_2:73505406-73505425 | None:intergenic | 60.0% |
| GATCGGGGATGGGAAGGTTC+TGG | - | chr1_2:73505434-73505453 | None:intergenic | 60.0% | |
| AACTCGCACGTGCGAGATCG+GGG | - | chr1_2:73505449-73505468 | None:intergenic | 60.0% | |
| CAACTCGCACGTGCGAGATC+GGG | - | chr1_2:73505450-73505469 | None:intergenic | 60.0% | |
| GCAACTCGCACGTGCGAGAT+CGG | - | chr1_2:73505451-73505470 | None:intergenic | 60.0% | |
| ! | CGTCTGCCGAGTCTGGAACT+CGG | + | chr1_2:73505470-73505489 | Msa0091370:intron | 60.0% |
| !! | GGAGGAGGAGGTGTTGGTGG+TGG | - | chr1_2:73505336-73505355 | None:intergenic | 65.0% |
| !! | GTGGGAGGAGGAGGTGTTGG+TGG | - | chr1_2:73505339-73505358 | None:intergenic | 65.0% |
| GTGCGAGATCGGGGATGGGA+AGG | - | chr1_2:73505440-73505459 | None:intergenic | 65.0% | |
| GCACGTGCGAGATCGGGGAT+GGG | - | chr1_2:73505444-73505463 | None:intergenic | 65.0% | |
| CGAGTTGCGTCTGCCGAGTC+TGG | + | chr1_2:73505463-73505482 | Msa0091370:intron | 65.0% | |
| !! | GGAGGAGGAGGTGTTGGTGG+TGG | - | chr1_2:73505336-73505355 | None:intergenic | 65.0% |
| !! | GTGGGAGGAGGAGGTGTTGG+TGG | - | chr1_2:73505339-73505358 | None:intergenic | 65.0% |
| GTGCGAGATCGGGGATGGGA+AGG | - | chr1_2:73505440-73505459 | None:intergenic | 65.0% | |
| GCACGTGCGAGATCGGGGAT+GGG | - | chr1_2:73505444-73505463 | None:intergenic | 65.0% | |
| CGAGTTGCGTCTGCCGAGTC+TGG | + | chr1_2:73505463-73505482 | Msa0091370:intron | 65.0% | |
| CGCACGTGCGAGATCGGGGA+TGG | - | chr1_2:73505445-73505464 | None:intergenic | 70.0% | |
| CGCACGTGCGAGATCGGGGA+TGG | - | chr1_2:73505445-73505464 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 73505249 | 73507159 | 73505249 | ID=Msa0091370;Name=Msa0091370 |
| chr1_2 | mRNA | 73505249 | 73507159 | 73505249 | ID=Msa0091370-mRNA-1;Parent=Msa0091370;Name=Msa0091370-mRNA-1;_AED=0.21;_eAED=0.33;_QI=0|0|0|0.5|0|0.5|2|0|522 |
| chr1_2 | exon | 73505249 | 73505459 | 73505249 | ID=Msa0091370-mRNA-1:exon:25802;Parent=Msa0091370-mRNA-1 |
| chr1_2 | exon | 73505802 | 73507159 | 73505802 | ID=Msa0091370-mRNA-1:exon:25803;Parent=Msa0091370-mRNA-1 |
| chr1_2 | CDS | 73505249 | 73505459 | 73505249 | ID=Msa0091370-mRNA-1:cds;Parent=Msa0091370-mRNA-1 |
| chr1_2 | CDS | 73505802 | 73507159 | 73505802 | ID=Msa0091370-mRNA-1:cds;Parent=Msa0091370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
