AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0032960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032960 MtrunA17_Chr1g0191891 95.865 266 7 2 1 266 1 262 0.0 518
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032960 AT1G55000.2 63.761 218 76 2 50 264 2 219 1.15e-96 283
Msa0032960 AT1G55000.1 63.761 218 76 2 50 264 2 219 1.15e-96 283
Msa0032960 AT1G55000.3 63.761 218 76 2 50 264 2 219 1.15e-96 283

Find 99 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGGAGGAGGTGTTGGTGG+TGG 0.241605 1_1:+60121221 None:intergenic
ATAAGATTCGTGGACGATTT+TGG 0.246197 1_1:-60121371 Msa0032960:five_prime_UTR
AGGTGTTGGTGGTGGGGTTG+AGG 0.263820 1_1:+60121229 None:intergenic
ACCCGATTTCTAGAAGCTTC+TGG 0.301921 1_1:-60120992 Msa0032960:CDS
ATTCAATTTCAACCCATGTT+TGG 0.313540 1_1:-60119730 Msa0032960:three_prime_UTR
CTCCAGAAGCTTCTAGAAAT+CGG 0.322000 1_1:+60120990 None:intergenic
GAGGAGGAGGTGTTGGTGGT+GGG 0.322473 1_1:+60121222 None:intergenic
AGGAGGAGGTGTTGGTGGTG+GGG 0.324079 1_1:+60121223 None:intergenic
TTCAATTTCAACCCATGTTT+GGG 0.326779 1_1:-60119729 Msa0032960:three_prime_UTR
AACTTGCATGCTTCTCTTCA+AGG 0.333288 1_1:+60119878 None:intergenic
TTGGGATAATCAAAGAAGTT+TGG 0.335365 1_1:-60119711 Msa0032960:three_prime_UTR
CGAGTTGCGTCTGCCGAGTC+TGG 0.340636 1_1:-60121091 Msa0032960:CDS
GAAGGTTCTGGAAGATGATT+TGG 0.344754 1_1:+60121135 None:intergenic
AGAATATCGGGATTACTAAT+AGG 0.352325 1_1:+60120047 None:intergenic
GATCGGGGATGGGAAGGTTC+TGG 0.355186 1_1:+60121123 None:intergenic
CTCAGAAGAAACCAACAAAA+AGG 0.366398 1_1:-60119910 Msa0032960:CDS
GAGTAAGTAATTTCTTGTTA+TGG 0.378803 1_1:-60119587 Msa0032960:three_prime_UTR
AGTAGGTCACTCCTAGTCTT+TGG 0.384001 1_1:-60119760 Msa0032960:exon
CGCCGTTAAGTACTCCGTTC+AGG 0.393861 1_1:-60120901 Msa0032960:intron
GTGGGAGGAGGAGGTGTTGG+TGG 0.412631 1_1:+60121218 None:intergenic
AAGAACTTGCTTTATTGAGC+TGG 0.414503 1_1:-60120018 Msa0032960:CDS
CTTAGCACCGTGGAAATTGA+AGG 0.424552 1_1:-60121027 Msa0032960:CDS
CAACTCGCACGTGCGAGATC+GGG 0.428494 1_1:+60121107 None:intergenic
GAAGTGGGAGGAGGAGGTGT+TGG 0.433837 1_1:+60121215 None:intergenic
TCCAGAAGCTTCTAGAAATC+GGG 0.438818 1_1:+60120991 None:intergenic
TGTTGGTGGTGGGGTTGAGG+TGG 0.443278 1_1:+60121232 None:intergenic
CCGCGGACCTTCAGTGGGGC+AGG 0.445516 1_1:-60119785 Msa0032960:CDS
GCAACTCGCACGTGCGAGAT+CGG 0.461154 1_1:+60121106 None:intergenic
ACTGTTGAAGTGGGAGGAGG+AGG 0.470676 1_1:+60121209 None:intergenic
AGAAGTTGCAGTGTTGTATC+CGG 0.473663 1_1:-60119979 Msa0032960:CDS
GACCTGAACGGAGTACTTAA+CGG 0.475918 1_1:+60120899 None:intergenic
GATTTGGAGGGTGTCGGTGG+AGG 0.478995 1_1:+60121151 None:intergenic
ATAAATAATCATGTTGGGTA+AGG 0.484092 1_1:-60119668 Msa0032960:three_prime_UTR
CCACCTACCTCCATTCTGCA+TGG 0.487238 1_1:-60121324 Msa0032960:exon
ATTACTGTTGAAGTGGGAGG+AGG 0.492526 1_1:+60121206 None:intergenic
AACAACATGATGAGCGATCA+TGG 0.498173 1_1:-60120098 Msa0032960:CDS
CCACGGTGCTAAGAAAGCTC+TGG 0.499969 1_1:+60121037 None:intergenic
CACCTACCTCCATTCTGCAT+GGG 0.501452 1_1:-60121323 Msa0032960:exon
CGCACGTGCGAGATCGGGGA+TGG 0.503094 1_1:+60121112 None:intergenic
CTACTTGCCTGCCCCACTGA+AGG 0.503713 1_1:+60119778 None:intergenic
AAGATGCTCAGAAGTGTAAA+GGG 0.504399 1_1:+60119399 None:intergenic
TACTACTGGTCTGTTTCAAA+CGG 0.508801 1_1:-60119837 Msa0032960:CDS
TGGAAATTGAAGGACGTAGT+TGG 0.509813 1_1:-60121017 Msa0032960:CDS
TTCTTTGATTATCCCAAACA+TGG 0.510911 1_1:+60119717 None:intergenic
GAAGATGCTCAGAAGTGTAA+AGG 0.513458 1_1:+60119398 None:intergenic
GAAGTTTGGTGATATGCAAA+TGG 0.514194 1_1:-60119697 Msa0032960:three_prime_UTR
TTTATGTCAGGTACATCATC+CGG 0.516672 1_1:+60119960 None:intergenic
CTTCAGTGGGGCAGGCAAGT+AGG 0.518848 1_1:-60119777 Msa0032960:CDS
GATGATTTGGAGGGTGTCGG+TGG 0.523454 1_1:+60121148 None:intergenic
AGAGGAAGAAGATGAACCTT+CGG 0.525862 1_1:+60121347 None:intergenic
GTGCGAGATCGGGGATGGGA+AGG 0.529104 1_1:+60121117 None:intergenic
GCGGAGAAATGAGAATTCAT+TGG 0.531909 1_1:+60121179 None:intergenic
GTGAAACTGCTCAATACTAC+TGG 0.532559 1_1:-60119851 Msa0032960:CDS
ACAATGTATTATTGTTAAAG+CGG 0.533470 1_1:-60119476 Msa0032960:three_prime_UTR
CAACAACAACCCATGCAGAA+TGG 0.534717 1_1:+60121314 None:intergenic
CTCCATCGGAGACTTGAGAC+TGG 0.535039 1_1:-60119609 Msa0032960:three_prime_UTR
TGATGATAAATAATCATGTT+GGG 0.539092 1_1:-60119673 Msa0032960:three_prime_UTR
ATCCACGCGTATAAGATTCG+TGG 0.542007 1_1:-60121381 Msa0032960:five_prime_UTR
ATGATGATAAATAATCATGT+TGG 0.542709 1_1:-60119674 Msa0032960:three_prime_UTR
GGTTCTGGAAGATGATTTGG+AGG 0.546672 1_1:+60121138 None:intergenic
ACATAGCTACTCTTTATGTC+AGG 0.547238 1_1:+60119948 None:intergenic
GCACGTGCGAGATCGGGGAT+GGG 0.550351 1_1:+60121113 None:intergenic
ATTATTTAGCTCCTCTCCAT+CGG 0.555897 1_1:-60119623 Msa0032960:three_prime_UTR
CTCCAGTCTCAAGTCTCCGA+TGG 0.560062 1_1:+60119607 None:intergenic
AAGAAGAAGAATTCATGAGA+TGG 0.574586 1_1:+60121264 None:intergenic
GCGATCATGGTATATACTCA+AGG 0.575308 1_1:-60120085 Msa0032960:CDS
AACTCGCACGTGCGAGATCG+GGG 0.575733 1_1:+60121108 None:intergenic
GAAGATGATTTGGAGGGTGT+CGG 0.579288 1_1:+60121145 None:intergenic
GTCTCAAGTCTCCGATGGAG+AGG 0.580475 1_1:+60119612 None:intergenic
GGTCACTCCTAGTCTTTGGA+AGG 0.584094 1_1:-60119756 Msa0032960:exon
CAGAATGGAGGTAGGTGGAG+AGG 0.585194 1_1:+60121329 None:intergenic
ATGGTATATACTCAAGGGAA+AGG 0.586472 1_1:-60120079 Msa0032960:CDS
ACTACGTCCTTCAATTTCCA+CGG 0.587526 1_1:+60121020 None:intergenic
GGTGTCGGTGGAGGAAAGTG+CGG 0.588317 1_1:+60121160 None:intergenic
GGTTACCATCTCCCTTTGTG+AGG 0.590197 1_1:+60121058 None:intergenic
GGTAGCCTCACAAAGGGAGA+TGG 0.593006 1_1:-60121063 Msa0032960:CDS
TGGTGAGATTACTGTTGAAG+TGG 0.595286 1_1:+60121199 None:intergenic
CGTCTGCCGAGTCTGGAACT+CGG 0.602052 1_1:-60121084 Msa0032960:CDS
CGATCATGGTATATACTCAA+GGG 0.604160 1_1:-60120084 Msa0032960:CDS
GAACTCGGTAGCCTCACAAA+GGG 0.613154 1_1:-60121069 Msa0032960:CDS
ATATAGTTCAACTACTAATG+TGG 0.615555 1_1:-60119559 Msa0032960:three_prime_UTR
ATCTCGCATCGTATTGTGCG+TGG 0.618881 1_1:-60120942 Msa0032960:CDS
TCTTTGATTATCCCAAACAT+GGG 0.620249 1_1:+60119718 None:intergenic
GAATTAACCTTCCAAAGACT+AGG 0.622110 1_1:+60119749 None:intergenic
CCTGCCCCACTGAAGGTCCG+CGG 0.625706 1_1:+60119785 None:intergenic
GGAACTCGGTAGCCTCACAA+AGG 0.631909 1_1:-60121070 Msa0032960:CDS
CCATGCAGAATGGAGGTAGG+TGG 0.638943 1_1:+60121324 None:intergenic
TAAACCCAAACGGACCTGAA+CGG 0.641440 1_1:+60120887 None:intergenic
AAGAAGAATTCATGAGATGG+CGG 0.645850 1_1:+60121267 None:intergenic
GGTGAGATTACTGTTGAAGT+GGG 0.649431 1_1:+60121200 None:intergenic
AGGCTACCGAGTTCCAGACT+CGG 0.651299 1_1:+60121078 None:intergenic
CAACAACCCATGCAGAATGG+AGG 0.663402 1_1:+60121317 None:intergenic
GTCCACGAATCTTATACGCG+TGG 0.665688 1_1:+60121379 None:intergenic
AACCCATGCAGAATGGAGGT+AGG 0.695579 1_1:+60121321 None:intergenic
GTTCTGGAAGATGATTTGGA+GGG 0.706445 1_1:+60121139 None:intergenic
AATTCAGCAAGAGCAGCACG+AGG 0.707212 1_1:+60119810 None:intergenic
CCAGAGCTTTCTTAGCACCG+TGG 0.711370 1_1:-60121037 Msa0032960:CDS
GAGATTACTGTTGAAGTGGG+AGG 0.723899 1_1:+60121203 None:intergenic
TGTTGTTGCGATGAAGACGA+CGG 0.735676 1_1:-60121299 Msa0032960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAATGTTTTTAATTTCA+TGG - chr1_1:60120485-60120504 Msa0032960:intron 10.0%
!!! TTAAAATGTTTTTAATTTCA+TGG - chr1_1:60120485-60120504 Msa0032960:intron 10.0%
!!! TATTACAGTACATTTATTTT+TGG + chr1_1:60119417-60119436 None:intergenic 15.0%
!!! CTTTTTTCTTTTGATAAAAT+GGG + chr1_1:60119467-60119486 None:intergenic 15.0%
!!! TCTTTTTTCTTTTGATAAAA+TGG + chr1_1:60119468-60119487 None:intergenic 15.0%
!! CTAGTTTATAAATTCTTAAT+AGG + chr1_1:60120614-60120633 None:intergenic 15.0%
!!! TTTAATACTTTTGATAAAGT+TGG - chr1_1:60120708-60120727 Msa0032960:intron 15.0%
!!! TATTACAGTACATTTATTTT+TGG + chr1_1:60119417-60119436 None:intergenic 15.0%
!!! CTTTTTTCTTTTGATAAAAT+GGG + chr1_1:60119467-60119486 None:intergenic 15.0%
!!! TCTTTTTTCTTTTGATAAAA+TGG + chr1_1:60119468-60119487 None:intergenic 15.0%
!! CTAGTTTATAAATTCTTAAT+AGG + chr1_1:60120614-60120633 None:intergenic 15.0%
!!! TTTAATACTTTTGATAAAGT+TGG - chr1_1:60120708-60120727 Msa0032960:intron 15.0%
!! AAATGATGACAATGAAATTA+TGG - chr1_1:60120088-60120107 Msa0032960:CDS 20.0%
!! ATATATTATGTGATTATCTC+CGG + chr1_1:60120187-60120206 None:intergenic 20.0%
!! TAATCACATAATATATGTGT+TGG - chr1_1:60120191-60120210 Msa0032960:intron 20.0%
!!! AGTTCTTTTAACAAGAATAT+CGG + chr1_1:60120846-60120865 None:intergenic 20.0%
!! ATGATGATAAATAATCATGT+TGG - chr1_1:60121203-60121222 Msa0032960:CDS 20.0%
!! TGATGATAAATAATCATGTT+GGG - chr1_1:60121204-60121223 Msa0032960:CDS 20.0%
!! ACAATGTATTATTGTTAAAG+CGG - chr1_1:60121401-60121420 Msa0032960:five_prime_UTR 20.0%
!! AAATGATGACAATGAAATTA+TGG - chr1_1:60120088-60120107 Msa0032960:CDS 20.0%
!! ATATATTATGTGATTATCTC+CGG + chr1_1:60120187-60120206 None:intergenic 20.0%
!! TAATCACATAATATATGTGT+TGG - chr1_1:60120191-60120210 Msa0032960:intron 20.0%
!!! AGTTCTTTTAACAAGAATAT+CGG + chr1_1:60120846-60120865 None:intergenic 20.0%
!! ATGATGATAAATAATCATGT+TGG - chr1_1:60121203-60121222 Msa0032960:CDS 20.0%
!! TGATGATAAATAATCATGTT+GGG - chr1_1:60121204-60121223 Msa0032960:CDS 20.0%
!! ACAATGTATTATTGTTAAAG+CGG - chr1_1:60121401-60121420 Msa0032960:five_prime_UTR 20.0%
! AACAAAGTAATAAACCCAAA+CGG + chr1_1:60120003-60120022 None:intergenic 25.0%
! TGAATATAGTTCATATGAGA+TGG - chr1_1:60120143-60120162 Msa0032960:intron 25.0%
!! GTTTTATATGTATAAAGCAC+CGG - chr1_1:60120165-60120184 Msa0032960:intron 25.0%
! TACTGTGATCAAATATGTTA+GGG - chr1_1:60120454-60120473 Msa0032960:intron 25.0%
! AGTATTAAACAGAAAAAACC+AGG + chr1_1:60120697-60120716 None:intergenic 25.0%
!!! AAATTTTTTGATGTTTCGAC+AGG - chr1_1:60120736-60120755 Msa0032960:intron 25.0%
!! GTTCTTTTAACAAGAATATC+GGG + chr1_1:60120845-60120864 None:intergenic 25.0%
! ATAAATAATCATGTTGGGTA+AGG - chr1_1:60121209-60121228 Msa0032960:CDS 25.0%
! GAGTAAGTAATTTCTTGTTA+TGG - chr1_1:60121290-60121309 Msa0032960:CDS 25.0%
! ATATAGTTCAACTACTAATG+TGG - chr1_1:60121318-60121337 Msa0032960:exon 25.0%
! AACAAAGTAATAAACCCAAA+CGG + chr1_1:60120003-60120022 None:intergenic 25.0%
! TGAATATAGTTCATATGAGA+TGG - chr1_1:60120143-60120162 Msa0032960:intron 25.0%
!! GTTTTATATGTATAAAGCAC+CGG - chr1_1:60120165-60120184 Msa0032960:intron 25.0%
! TACTGTGATCAAATATGTTA+GGG - chr1_1:60120454-60120473 Msa0032960:intron 25.0%
! AGTATTAAACAGAAAAAACC+AGG + chr1_1:60120697-60120716 None:intergenic 25.0%
!!! AAATTTTTTGATGTTTCGAC+AGG - chr1_1:60120736-60120755 Msa0032960:intron 25.0%
!! GTTCTTTTAACAAGAATATC+GGG + chr1_1:60120845-60120864 None:intergenic 25.0%
! ATAAATAATCATGTTGGGTA+AGG - chr1_1:60121209-60121228 Msa0032960:CDS 25.0%
! GAGTAAGTAATTTCTTGTTA+TGG - chr1_1:60121290-60121309 Msa0032960:CDS 25.0%
! ATATAGTTCAACTACTAATG+TGG - chr1_1:60121318-60121337 Msa0032960:exon 25.0%
AAGAAGAAGAATTCATGAGA+TGG + chr1_1:60119616-60119635 None:intergenic 30.0%
GTACTGTGATCAAATATGTT+AGG - chr1_1:60120453-60120472 Msa0032960:intron 30.0%
AGAATATCGGGATTACTAAT+AGG + chr1_1:60120833-60120852 None:intergenic 30.0%
ATTCAATTTCAACCCATGTT+TGG - chr1_1:60121147-60121166 Msa0032960:CDS 30.0%
TTCAATTTCAACCCATGTTT+GGG - chr1_1:60121148-60121167 Msa0032960:CDS 30.0%
TCTTTGATTATCCCAAACAT+GGG + chr1_1:60121162-60121181 None:intergenic 30.0%
TTCTTTGATTATCCCAAACA+TGG + chr1_1:60121163-60121182 None:intergenic 30.0%
TTGGGATAATCAAAGAAGTT+TGG - chr1_1:60121166-60121185 Msa0032960:CDS 30.0%
ACAGATCAGAATTAATACCA+AGG - chr1_1:60121514-60121533 Msa0032960:five_prime_UTR 30.0%
AAGAAGAAGAATTCATGAGA+TGG + chr1_1:60119616-60119635 None:intergenic 30.0%
GTACTGTGATCAAATATGTT+AGG - chr1_1:60120453-60120472 Msa0032960:intron 30.0%
AGAATATCGGGATTACTAAT+AGG + chr1_1:60120833-60120852 None:intergenic 30.0%
ATTCAATTTCAACCCATGTT+TGG - chr1_1:60121147-60121166 Msa0032960:CDS 30.0%
TTCAATTTCAACCCATGTTT+GGG - chr1_1:60121148-60121167 Msa0032960:CDS 30.0%
TCTTTGATTATCCCAAACAT+GGG + chr1_1:60121162-60121181 None:intergenic 30.0%
TTCTTTGATTATCCCAAACA+TGG + chr1_1:60121163-60121182 None:intergenic 30.0%
TTGGGATAATCAAAGAAGTT+TGG - chr1_1:60121166-60121185 Msa0032960:CDS 30.0%
! ATAAGATTCGTGGACGATTT+TGG - chr1_1:60119506-60119525 Msa0032960:three_prime_UTR 35.0%
AAGAAGAATTCATGAGATGG+CGG + chr1_1:60119613-60119632 None:intergenic 35.0%
AATGTTATCTCCATTACGGA+TGG + chr1_1:60120289-60120308 None:intergenic 35.0%
! ATCCGTAATGGAGATAACAT+TGG - chr1_1:60120288-60120307 Msa0032960:intron 35.0%
CACCAATGTTATCTCCATTA+CGG + chr1_1:60120293-60120312 None:intergenic 35.0%
! GTAATGGAGATAACATTGGT+GGG - chr1_1:60120292-60120311 Msa0032960:intron 35.0%
GATAACATTGGTGGGAATAT+AGG - chr1_1:60120300-60120319 Msa0032960:intron 35.0%
GTAAAGCACAGAAATCTCTA+AGG + chr1_1:60120397-60120416 None:intergenic 35.0%
! TCACTGCAATATCAGGTTTT+AGG - chr1_1:60120522-60120541 Msa0032960:intron 35.0%
! TATTTTCATTGTTCTGTGCC+TGG - chr1_1:60120676-60120695 Msa0032960:intron 35.0%
CGATCATGGTATATACTCAA+GGG - chr1_1:60120793-60120812 Msa0032960:intron 35.0%
ATGGTATATACTCAAGGGAA+AGG - chr1_1:60120798-60120817 Msa0032960:intron 35.0%
! AAGAACTTGCTTTATTGAGC+TGG - chr1_1:60120859-60120878 Msa0032960:intron 35.0%
TTTATGTCAGGTACATCATC+CGG + chr1_1:60120920-60120939 None:intergenic 35.0%
ACATAGCTACTCTTTATGTC+AGG + chr1_1:60120932-60120951 None:intergenic 35.0%
!!! CTTTTTGTTGGTTTCTTCTG+AGG + chr1_1:60120969-60120988 None:intergenic 35.0%
CTCAGAAGAAACCAACAAAA+AGG - chr1_1:60120967-60120986 Msa0032960:CDS 35.0%
! TACTACTGGTCTGTTTCAAA+CGG - chr1_1:60121040-60121059 Msa0032960:CDS 35.0%
GAATTAACCTTCCAAAGACT+AGG + chr1_1:60121131-60121150 None:intergenic 35.0%
! GAAGTTTGGTGATATGCAAA+TGG - chr1_1:60121180-60121199 Msa0032960:CDS 35.0%
! ATTATTTAGCTCCTCTCCAT+CGG - chr1_1:60121254-60121273 Msa0032960:CDS 35.0%
! AAGATGCTCAGAAGTGTAAA+GGG + chr1_1:60121481-60121500 None:intergenic 35.0%
! ATAAGATTCGTGGACGATTT+TGG - chr1_1:60119506-60119525 Msa0032960:three_prime_UTR 35.0%
AAGAAGAATTCATGAGATGG+CGG + chr1_1:60119613-60119632 None:intergenic 35.0%
AATGTTATCTCCATTACGGA+TGG + chr1_1:60120289-60120308 None:intergenic 35.0%
! ATCCGTAATGGAGATAACAT+TGG - chr1_1:60120288-60120307 Msa0032960:intron 35.0%
CACCAATGTTATCTCCATTA+CGG + chr1_1:60120293-60120312 None:intergenic 35.0%
! GTAATGGAGATAACATTGGT+GGG - chr1_1:60120292-60120311 Msa0032960:intron 35.0%
GATAACATTGGTGGGAATAT+AGG - chr1_1:60120300-60120319 Msa0032960:intron 35.0%
GTAAAGCACAGAAATCTCTA+AGG + chr1_1:60120397-60120416 None:intergenic 35.0%
! TCACTGCAATATCAGGTTTT+AGG - chr1_1:60120522-60120541 Msa0032960:intron 35.0%
! TATTTTCATTGTTCTGTGCC+TGG - chr1_1:60120676-60120695 Msa0032960:intron 35.0%
CGATCATGGTATATACTCAA+GGG - chr1_1:60120793-60120812 Msa0032960:intron 35.0%
ATGGTATATACTCAAGGGAA+AGG - chr1_1:60120798-60120817 Msa0032960:intron 35.0%
! AAGAACTTGCTTTATTGAGC+TGG - chr1_1:60120859-60120878 Msa0032960:intron 35.0%
TTTATGTCAGGTACATCATC+CGG + chr1_1:60120920-60120939 None:intergenic 35.0%
ACATAGCTACTCTTTATGTC+AGG + chr1_1:60120932-60120951 None:intergenic 35.0%
!!! CTTTTTGTTGGTTTCTTCTG+AGG + chr1_1:60120969-60120988 None:intergenic 35.0%
CTCAGAAGAAACCAACAAAA+AGG - chr1_1:60120967-60120986 Msa0032960:CDS 35.0%
! TACTACTGGTCTGTTTCAAA+CGG - chr1_1:60121040-60121059 Msa0032960:CDS 35.0%
GAATTAACCTTCCAAAGACT+AGG + chr1_1:60121131-60121150 None:intergenic 35.0%
! GAAGTTTGGTGATATGCAAA+TGG - chr1_1:60121180-60121199 Msa0032960:CDS 35.0%
! ATTATTTAGCTCCTCTCCAT+CGG - chr1_1:60121254-60121273 Msa0032960:CDS 35.0%
! AAGATGCTCAGAAGTGTAAA+GGG + chr1_1:60121481-60121500 None:intergenic 35.0%
AGAGGAAGAAGATGAACCTT+CGG + chr1_1:60119533-60119552 None:intergenic 40.0%
GGTGAGATTACTGTTGAAGT+GGG + chr1_1:60119680-60119699 None:intergenic 40.0%
TGGTGAGATTACTGTTGAAG+TGG + chr1_1:60119681-60119700 None:intergenic 40.0%
GCGGAGAAATGAGAATTCAT+TGG + chr1_1:60119701-60119720 None:intergenic 40.0%
!! GTTCTGGAAGATGATTTGGA+GGG + chr1_1:60119741-60119760 None:intergenic 40.0%
!! GAAGGTTCTGGAAGATGATT+TGG + chr1_1:60119745-60119764 None:intergenic 40.0%
ACTACGTCCTTCAATTTCCA+CGG + chr1_1:60119860-60119879 None:intergenic 40.0%
TGGAAATTGAAGGACGTAGT+TGG - chr1_1:60119860-60119879 Msa0032960:CDS 40.0%
! TCCAGAAGCTTCTAGAAATC+GGG + chr1_1:60119889-60119908 None:intergenic 40.0%
! CTCCAGAAGCTTCTAGAAAT+CGG + chr1_1:60119890-60119909 None:intergenic 40.0%
! GAAACAGAGCTCTTTTATCG+CGG + chr1_1:60120253-60120272 None:intergenic 40.0%
TACGGATGGACAAATCTGTT+TGG + chr1_1:60120275-60120294 None:intergenic 40.0%
ACAGATTTGTCCATCCGTAA+TGG - chr1_1:60120276-60120295 Msa0032960:intron 40.0%
! CGTAATGGAGATAACATTGG+TGG - chr1_1:60120291-60120310 Msa0032960:intron 40.0%
AGTGACCATGCTTCATAGAT+TGG - chr1_1:60120346-60120365 Msa0032960:intron 40.0%
GATTTCTGTGCTTTACAGTC+AGG - chr1_1:60120401-60120420 Msa0032960:intron 40.0%
TCACAGTACAGTAGTCAACA+AGG + chr1_1:60120442-60120461 None:intergenic 40.0%
ATTGCAGTGACAGGGAAATT+TGG + chr1_1:60120512-60120531 None:intergenic 40.0%
AACCTGATATTGCAGTGACA+GGG + chr1_1:60120520-60120539 None:intergenic 40.0%
AAACCTGATATTGCAGTGAC+AGG + chr1_1:60120521-60120540 None:intergenic 40.0%
TTTGATGTTTCGACAGGTGA+TGG - chr1_1:60120742-60120761 Msa0032960:intron 40.0%
AACAACATGATGAGCGATCA+TGG - chr1_1:60120779-60120798 Msa0032960:intron 40.0%
GCGATCATGGTATATACTCA+AGG - chr1_1:60120792-60120811 Msa0032960:intron 40.0%
AGAAGTTGCAGTGTTGTATC+CGG - chr1_1:60120898-60120917 Msa0032960:intron 40.0%
! GGAATCAAGCACCTTTTTGT+TGG + chr1_1:60120981-60121000 None:intergenic 40.0%
AACTTGCATGCTTCTCTTCA+AGG + chr1_1:60121002-60121021 None:intergenic 40.0%
GTGAAACTGCTCAATACTAC+TGG - chr1_1:60121026-60121045 Msa0032960:CDS 40.0%
! GAAGATGCTCAGAAGTGTAA+AGG + chr1_1:60121482-60121501 None:intergenic 40.0%
AGAGGAAGAAGATGAACCTT+CGG + chr1_1:60119533-60119552 None:intergenic 40.0%
GGTGAGATTACTGTTGAAGT+GGG + chr1_1:60119680-60119699 None:intergenic 40.0%
TGGTGAGATTACTGTTGAAG+TGG + chr1_1:60119681-60119700 None:intergenic 40.0%
GCGGAGAAATGAGAATTCAT+TGG + chr1_1:60119701-60119720 None:intergenic 40.0%
!! GTTCTGGAAGATGATTTGGA+GGG + chr1_1:60119741-60119760 None:intergenic 40.0%
!! GAAGGTTCTGGAAGATGATT+TGG + chr1_1:60119745-60119764 None:intergenic 40.0%
ACTACGTCCTTCAATTTCCA+CGG + chr1_1:60119860-60119879 None:intergenic 40.0%
TGGAAATTGAAGGACGTAGT+TGG - chr1_1:60119860-60119879 Msa0032960:CDS 40.0%
! TCCAGAAGCTTCTAGAAATC+GGG + chr1_1:60119889-60119908 None:intergenic 40.0%
! CTCCAGAAGCTTCTAGAAAT+CGG + chr1_1:60119890-60119909 None:intergenic 40.0%
! GAAACAGAGCTCTTTTATCG+CGG + chr1_1:60120253-60120272 None:intergenic 40.0%
TACGGATGGACAAATCTGTT+TGG + chr1_1:60120275-60120294 None:intergenic 40.0%
ACAGATTTGTCCATCCGTAA+TGG - chr1_1:60120276-60120295 Msa0032960:intron 40.0%
! CGTAATGGAGATAACATTGG+TGG - chr1_1:60120291-60120310 Msa0032960:intron 40.0%
AGTGACCATGCTTCATAGAT+TGG - chr1_1:60120346-60120365 Msa0032960:intron 40.0%
GATTTCTGTGCTTTACAGTC+AGG - chr1_1:60120401-60120420 Msa0032960:intron 40.0%
TCACAGTACAGTAGTCAACA+AGG + chr1_1:60120442-60120461 None:intergenic 40.0%
ATTGCAGTGACAGGGAAATT+TGG + chr1_1:60120512-60120531 None:intergenic 40.0%
AACCTGATATTGCAGTGACA+GGG + chr1_1:60120520-60120539 None:intergenic 40.0%
AAACCTGATATTGCAGTGAC+AGG + chr1_1:60120521-60120540 None:intergenic 40.0%
TTTGATGTTTCGACAGGTGA+TGG - chr1_1:60120742-60120761 Msa0032960:intron 40.0%
AACAACATGATGAGCGATCA+TGG - chr1_1:60120779-60120798 Msa0032960:intron 40.0%
GCGATCATGGTATATACTCA+AGG - chr1_1:60120792-60120811 Msa0032960:intron 40.0%
AGAAGTTGCAGTGTTGTATC+CGG - chr1_1:60120898-60120917 Msa0032960:intron 40.0%
! GGAATCAAGCACCTTTTTGT+TGG + chr1_1:60120981-60121000 None:intergenic 40.0%
AACTTGCATGCTTCTCTTCA+AGG + chr1_1:60121002-60121021 None:intergenic 40.0%
GTGAAACTGCTCAATACTAC+TGG - chr1_1:60121026-60121045 Msa0032960:CDS 40.0%
! GAAGATGCTCAGAAGTGTAA+AGG + chr1_1:60121482-60121501 None:intergenic 40.0%
ATCCACGCGTATAAGATTCG+TGG - chr1_1:60119496-60119515 Msa0032960:three_prime_UTR 45.0%
CAACAACAACCCATGCAGAA+TGG + chr1_1:60119566-60119585 None:intergenic 45.0%
TGTTGTTGCGATGAAGACGA+CGG - chr1_1:60119578-60119597 Msa0032960:three_prime_UTR 45.0%
ATTACTGTTGAAGTGGGAGG+AGG + chr1_1:60119674-60119693 None:intergenic 45.0%
GAGATTACTGTTGAAGTGGG+AGG + chr1_1:60119677-60119696 None:intergenic 45.0%
! GAAGATGATTTGGAGGGTGT+CGG + chr1_1:60119735-60119754 None:intergenic 45.0%
!! GGTTCTGGAAGATGATTTGG+AGG + chr1_1:60119742-60119761 None:intergenic 45.0%
CTTAGCACCGTGGAAATTGA+AGG - chr1_1:60119850-60119869 Msa0032960:CDS 45.0%
! ACCCGATTTCTAGAAGCTTC+TGG - chr1_1:60119885-60119904 Msa0032960:CDS 45.0%
! GACCTGAACGGAGTACTTAA+CGG + chr1_1:60119981-60120000 None:intergenic 45.0%
TAAACCCAAACGGACCTGAA+CGG + chr1_1:60119993-60120012 None:intergenic 45.0%
CCATGCTTCATAGATTGGTG+CGG - chr1_1:60120351-60120370 Msa0032960:intron 45.0%
TTCCCTGTCACTGCAATATC+AGG - chr1_1:60120515-60120534 Msa0032960:intron 45.0%
! TGCTCTTGCTGAATTTTCCG+CGG - chr1_1:60121075-60121094 Msa0032960:CDS 45.0%
! AGTAGGTCACTCCTAGTCTT+TGG - chr1_1:60121117-60121136 Msa0032960:CDS 45.0%
ATCCACGCGTATAAGATTCG+TGG - chr1_1:60119496-60119515 Msa0032960:three_prime_UTR 45.0%
CAACAACAACCCATGCAGAA+TGG + chr1_1:60119566-60119585 None:intergenic 45.0%
TGTTGTTGCGATGAAGACGA+CGG - chr1_1:60119578-60119597 Msa0032960:three_prime_UTR 45.0%
ATTACTGTTGAAGTGGGAGG+AGG + chr1_1:60119674-60119693 None:intergenic 45.0%
GAGATTACTGTTGAAGTGGG+AGG + chr1_1:60119677-60119696 None:intergenic 45.0%
! GAAGATGATTTGGAGGGTGT+CGG + chr1_1:60119735-60119754 None:intergenic 45.0%
!! GGTTCTGGAAGATGATTTGG+AGG + chr1_1:60119742-60119761 None:intergenic 45.0%
CTTAGCACCGTGGAAATTGA+AGG - chr1_1:60119850-60119869 Msa0032960:CDS 45.0%
! ACCCGATTTCTAGAAGCTTC+TGG - chr1_1:60119885-60119904 Msa0032960:CDS 45.0%
! GACCTGAACGGAGTACTTAA+CGG + chr1_1:60119981-60120000 None:intergenic 45.0%
TAAACCCAAACGGACCTGAA+CGG + chr1_1:60119993-60120012 None:intergenic 45.0%
CCATGCTTCATAGATTGGTG+CGG - chr1_1:60120351-60120370 Msa0032960:intron 45.0%
TTCCCTGTCACTGCAATATC+AGG - chr1_1:60120515-60120534 Msa0032960:intron 45.0%
! TGCTCTTGCTGAATTTTCCG+CGG - chr1_1:60121075-60121094 Msa0032960:CDS 45.0%
! AGTAGGTCACTCCTAGTCTT+TGG - chr1_1:60121117-60121136 Msa0032960:CDS 45.0%
GTCCACGAATCTTATACGCG+TGG + chr1_1:60119501-60119520 None:intergenic 50.0%
CACCTACCTCCATTCTGCAT+GGG - chr1_1:60119554-60119573 Msa0032960:three_prime_UTR 50.0%
AACCCATGCAGAATGGAGGT+AGG + chr1_1:60119559-60119578 None:intergenic 50.0%
CAACAACCCATGCAGAATGG+AGG + chr1_1:60119563-60119582 None:intergenic 50.0%
GAACTCGGTAGCCTCACAAA+GGG - chr1_1:60119808-60119827 Msa0032960:CDS 50.0%
GGTTACCATCTCCCTTTGTG+AGG + chr1_1:60119822-60119841 None:intergenic 50.0%
ATCTCGCATCGTATTGTGCG+TGG - chr1_1:60119935-60119954 Msa0032960:CDS 50.0%
TACTCCGTTCAGGTCCGTTT+GGG - chr1_1:60119986-60120005 Msa0032960:CDS 50.0%
!! TGTTGGTGTCATGTCCGTGT+CGG - chr1_1:60120208-60120227 Msa0032960:intron 50.0%
CCGCACCAATCTATGAAGCA+TGG + chr1_1:60120354-60120373 None:intergenic 50.0%
AATTCAGCAAGAGCAGCACG+AGG + chr1_1:60121070-60121089 None:intergenic 50.0%
! AATTTTCCGCGGACCTTCAG+TGG - chr1_1:60121086-60121105 Msa0032960:CDS 50.0%
! ATTTTCCGCGGACCTTCAGT+GGG - chr1_1:60121087-60121106 Msa0032960:CDS 50.0%
! GGTCACTCCTAGTCTTTGGA+AGG - chr1_1:60121121-60121140 Msa0032960:CDS 50.0%
GTCCACGAATCTTATACGCG+TGG + chr1_1:60119501-60119520 None:intergenic 50.0%
CACCTACCTCCATTCTGCAT+GGG - chr1_1:60119554-60119573 Msa0032960:three_prime_UTR 50.0%
AACCCATGCAGAATGGAGGT+AGG + chr1_1:60119559-60119578 None:intergenic 50.0%
CAACAACCCATGCAGAATGG+AGG + chr1_1:60119563-60119582 None:intergenic 50.0%
GAACTCGGTAGCCTCACAAA+GGG - chr1_1:60119808-60119827 Msa0032960:CDS 50.0%
GGTTACCATCTCCCTTTGTG+AGG + chr1_1:60119822-60119841 None:intergenic 50.0%
ATCTCGCATCGTATTGTGCG+TGG - chr1_1:60119935-60119954 Msa0032960:CDS 50.0%
TACTCCGTTCAGGTCCGTTT+GGG - chr1_1:60119986-60120005 Msa0032960:CDS 50.0%
!! TGTTGGTGTCATGTCCGTGT+CGG - chr1_1:60120208-60120227 Msa0032960:intron 50.0%
CCGCACCAATCTATGAAGCA+TGG + chr1_1:60120354-60120373 None:intergenic 50.0%
AATTCAGCAAGAGCAGCACG+AGG + chr1_1:60121070-60121089 None:intergenic 50.0%
! AATTTTCCGCGGACCTTCAG+TGG - chr1_1:60121086-60121105 Msa0032960:CDS 50.0%
! ATTTTCCGCGGACCTTCAGT+GGG - chr1_1:60121087-60121106 Msa0032960:CDS 50.0%
! GGTCACTCCTAGTCTTTGGA+AGG - chr1_1:60121121-60121140 Msa0032960:CDS 50.0%
!! CGTGGACGATTTTGGTCCGA+AGG - chr1_1:60119514-60119533 Msa0032960:three_prime_UTR 55.0%
CAGAATGGAGGTAGGTGGAG+AGG + chr1_1:60119551-60119570 None:intergenic 55.0%
CCATGCAGAATGGAGGTAGG+TGG + chr1_1:60119556-60119575 None:intergenic 55.0%
CCACCTACCTCCATTCTGCA+TGG - chr1_1:60119553-60119572 Msa0032960:three_prime_UTR 55.0%
ACTGTTGAAGTGGGAGGAGG+AGG + chr1_1:60119671-60119690 None:intergenic 55.0%
!! GATGATTTGGAGGGTGTCGG+TGG + chr1_1:60119732-60119751 None:intergenic 55.0%
AGGCTACCGAGTTCCAGACT+CGG + chr1_1:60119802-60119821 None:intergenic 55.0%
GGAACTCGGTAGCCTCACAA+AGG - chr1_1:60119807-60119826 Msa0032960:CDS 55.0%
GGTAGCCTCACAAAGGGAGA+TGG - chr1_1:60119814-60119833 Msa0032960:CDS 55.0%
! CCACGGTGCTAAGAAAGCTC+TGG + chr1_1:60119843-60119862 None:intergenic 55.0%
CCAGAGCTTTCTTAGCACCG+TGG - chr1_1:60119840-60119859 Msa0032960:CDS 55.0%
CGCCGTTAAGTACTCCGTTC+AGG - chr1_1:60119976-60119995 Msa0032960:CDS 55.0%
GTACTCCGTTCAGGTCCGTT+TGG - chr1_1:60119985-60120004 Msa0032960:CDS 55.0%
GACATGTGTCGTGTCCGACA+CGG + chr1_1:60120225-60120244 None:intergenic 55.0%
CCTCGCATTAGGCGTGTCAT+CGG + chr1_1:60120326-60120345 None:intergenic 55.0%
GCATGGTCACTCCTCGCATT+AGG + chr1_1:60120337-60120356 None:intergenic 55.0%
! TTTTCCGCGGACCTTCAGTG+GGG - chr1_1:60121088-60121107 Msa0032960:CDS 55.0%
GTCTCAAGTCTCCGATGGAG+AGG + chr1_1:60121268-60121287 None:intergenic 55.0%
CTCCATCGGAGACTTGAGAC+TGG - chr1_1:60121268-60121287 Msa0032960:CDS 55.0%
CTCCAGTCTCAAGTCTCCGA+TGG + chr1_1:60121273-60121292 None:intergenic 55.0%
!! CGTGGACGATTTTGGTCCGA+AGG - chr1_1:60119514-60119533 Msa0032960:three_prime_UTR 55.0%
CAGAATGGAGGTAGGTGGAG+AGG + chr1_1:60119551-60119570 None:intergenic 55.0%
CCATGCAGAATGGAGGTAGG+TGG + chr1_1:60119556-60119575 None:intergenic 55.0%
CCACCTACCTCCATTCTGCA+TGG - chr1_1:60119553-60119572 Msa0032960:three_prime_UTR 55.0%
ACTGTTGAAGTGGGAGGAGG+AGG + chr1_1:60119671-60119690 None:intergenic 55.0%
!! GATGATTTGGAGGGTGTCGG+TGG + chr1_1:60119732-60119751 None:intergenic 55.0%
AGGCTACCGAGTTCCAGACT+CGG + chr1_1:60119802-60119821 None:intergenic 55.0%
GGAACTCGGTAGCCTCACAA+AGG - chr1_1:60119807-60119826 Msa0032960:CDS 55.0%
GGTAGCCTCACAAAGGGAGA+TGG - chr1_1:60119814-60119833 Msa0032960:CDS 55.0%
! CCACGGTGCTAAGAAAGCTC+TGG + chr1_1:60119843-60119862 None:intergenic 55.0%
CCAGAGCTTTCTTAGCACCG+TGG - chr1_1:60119840-60119859 Msa0032960:CDS 55.0%
CGCCGTTAAGTACTCCGTTC+AGG - chr1_1:60119976-60119995 Msa0032960:CDS 55.0%
GTACTCCGTTCAGGTCCGTT+TGG - chr1_1:60119985-60120004 Msa0032960:CDS 55.0%
GACATGTGTCGTGTCCGACA+CGG + chr1_1:60120225-60120244 None:intergenic 55.0%
CCTCGCATTAGGCGTGTCAT+CGG + chr1_1:60120326-60120345 None:intergenic 55.0%
GCATGGTCACTCCTCGCATT+AGG + chr1_1:60120337-60120356 None:intergenic 55.0%
! TTTTCCGCGGACCTTCAGTG+GGG - chr1_1:60121088-60121107 Msa0032960:CDS 55.0%
GTCTCAAGTCTCCGATGGAG+AGG + chr1_1:60121268-60121287 None:intergenic 55.0%
CTCCATCGGAGACTTGAGAC+TGG - chr1_1:60121268-60121287 Msa0032960:CDS 55.0%
CTCCAGTCTCAAGTCTCCGA+TGG + chr1_1:60121273-60121292 None:intergenic 55.0%
!! TGTTGGTGGTGGGGTTGAGG+TGG + chr1_1:60119648-60119667 None:intergenic 60.0%
!! AGGTGTTGGTGGTGGGGTTG+AGG + chr1_1:60119651-60119670 None:intergenic 60.0%
!! AGGAGGAGGTGTTGGTGGTG+GGG + chr1_1:60119657-60119676 None:intergenic 60.0%
!! GAGGAGGAGGTGTTGGTGGT+GGG + chr1_1:60119658-60119677 None:intergenic 60.0%
! GAAGTGGGAGGAGGAGGTGT+TGG + chr1_1:60119665-60119684 None:intergenic 60.0%
!! GGTGTCGGTGGAGGAAAGTG+CGG + chr1_1:60119720-60119739 None:intergenic 60.0%
!! GATTTGGAGGGTGTCGGTGG+AGG + chr1_1:60119729-60119748 None:intergenic 60.0%
GATCGGGGATGGGAAGGTTC+TGG + chr1_1:60119757-60119776 None:intergenic 60.0%
AACTCGCACGTGCGAGATCG+GGG + chr1_1:60119772-60119791 None:intergenic 60.0%
CAACTCGCACGTGCGAGATC+GGG + chr1_1:60119773-60119792 None:intergenic 60.0%
GCAACTCGCACGTGCGAGAT+CGG + chr1_1:60119774-60119793 None:intergenic 60.0%
! CGTCTGCCGAGTCTGGAACT+CGG - chr1_1:60119793-60119812 Msa0032960:CDS 60.0%
CCGATGACACGCCTAATGCG+AGG - chr1_1:60120323-60120342 Msa0032960:intron 60.0%
CTACTTGCCTGCCCCACTGA+AGG + chr1_1:60121102-60121121 None:intergenic 60.0%
CTTCAGTGGGGCAGGCAAGT+AGG - chr1_1:60121100-60121119 Msa0032960:CDS 60.0%
!! TGTTGGTGGTGGGGTTGAGG+TGG + chr1_1:60119648-60119667 None:intergenic 60.0%
!! AGGTGTTGGTGGTGGGGTTG+AGG + chr1_1:60119651-60119670 None:intergenic 60.0%
!! AGGAGGAGGTGTTGGTGGTG+GGG + chr1_1:60119657-60119676 None:intergenic 60.0%
!! GAGGAGGAGGTGTTGGTGGT+GGG + chr1_1:60119658-60119677 None:intergenic 60.0%
! GAAGTGGGAGGAGGAGGTGT+TGG + chr1_1:60119665-60119684 None:intergenic 60.0%
!! GGTGTCGGTGGAGGAAAGTG+CGG + chr1_1:60119720-60119739 None:intergenic 60.0%
!! GATTTGGAGGGTGTCGGTGG+AGG + chr1_1:60119729-60119748 None:intergenic 60.0%
GATCGGGGATGGGAAGGTTC+TGG + chr1_1:60119757-60119776 None:intergenic 60.0%
AACTCGCACGTGCGAGATCG+GGG + chr1_1:60119772-60119791 None:intergenic 60.0%
CAACTCGCACGTGCGAGATC+GGG + chr1_1:60119773-60119792 None:intergenic 60.0%
GCAACTCGCACGTGCGAGAT+CGG + chr1_1:60119774-60119793 None:intergenic 60.0%
! CGTCTGCCGAGTCTGGAACT+CGG - chr1_1:60119793-60119812 Msa0032960:CDS 60.0%
CCGATGACACGCCTAATGCG+AGG - chr1_1:60120323-60120342 Msa0032960:intron 60.0%
CTACTTGCCTGCCCCACTGA+AGG + chr1_1:60121102-60121121 None:intergenic 60.0%
CTTCAGTGGGGCAGGCAAGT+AGG - chr1_1:60121100-60121119 Msa0032960:CDS 60.0%
!! GGAGGAGGAGGTGTTGGTGG+TGG + chr1_1:60119659-60119678 None:intergenic 65.0%
!! GTGGGAGGAGGAGGTGTTGG+TGG + chr1_1:60119662-60119681 None:intergenic 65.0%
GTGCGAGATCGGGGATGGGA+AGG + chr1_1:60119763-60119782 None:intergenic 65.0%
GCACGTGCGAGATCGGGGAT+GGG + chr1_1:60119767-60119786 None:intergenic 65.0%
CGAGTTGCGTCTGCCGAGTC+TGG - chr1_1:60119786-60119805 Msa0032960:CDS 65.0%
!! GGAGGAGGAGGTGTTGGTGG+TGG + chr1_1:60119659-60119678 None:intergenic 65.0%
!! GTGGGAGGAGGAGGTGTTGG+TGG + chr1_1:60119662-60119681 None:intergenic 65.0%
GTGCGAGATCGGGGATGGGA+AGG + chr1_1:60119763-60119782 None:intergenic 65.0%
GCACGTGCGAGATCGGGGAT+GGG + chr1_1:60119767-60119786 None:intergenic 65.0%
CGAGTTGCGTCTGCCGAGTC+TGG - chr1_1:60119786-60119805 Msa0032960:CDS 65.0%
CGCACGTGCGAGATCGGGGA+TGG + chr1_1:60119768-60119787 None:intergenic 70.0%
CCTGCCCCACTGAAGGTCCG+CGG + chr1_1:60121095-60121114 None:intergenic 70.0%
CGCACGTGCGAGATCGGGGA+TGG + chr1_1:60119768-60119787 None:intergenic 70.0%
CCTGCCCCACTGAAGGTCCG+CGG + chr1_1:60121095-60121114 None:intergenic 70.0%
CCGCGGACCTTCAGTGGGGC+AGG - chr1_1:60121092-60121111 Msa0032960:CDS 75.0%
CCGCGGACCTTCAGTGGGGC+AGG - chr1_1:60121092-60121111 Msa0032960:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 60119364 60121535 60119364 ID=Msa0032960;Name=Msa0032960
chr1_1 mRNA 60119364 60121535 60119364 ID=Msa0032960-mRNA-1;Parent=Msa0032960;Name=Msa0032960-mRNA-1;_AED=0.00;_eAED=0.00;_QI=208|1|1|1|1|1|2|403|266
chr1_1 exon 60119364 60120141 60119364 ID=Msa0032960-mRNA-1:exon:18786;Parent=Msa0032960-mRNA-1
chr1_1 exon 60120902 60121535 60120902 ID=Msa0032960-mRNA-1:exon:18785;Parent=Msa0032960-mRNA-1
chr1_1 five_prime_UTR 60121328 60121535 60121328 ID=Msa0032960-mRNA-1:five_prime_utr;Parent=Msa0032960-mRNA-1
chr1_1 CDS 60120902 60121327 60120902 ID=Msa0032960-mRNA-1:cds;Parent=Msa0032960-mRNA-1
chr1_1 CDS 60119767 60120141 60119767 ID=Msa0032960-mRNA-1:cds;Parent=Msa0032960-mRNA-1
chr1_1 three_prime_UTR 60119364 60119766 60119364 ID=Msa0032960-mRNA-1:three_prime_utr;Parent=Msa0032960-mRNA-1
Gene Sequence

>Msa0032960

ATGGGTTGTTGTTGCGATGAAGACGACGGTGACATTCTCCGCCATCTCATGAATTCTTCTTCTTCTTTTTCATCCACCTCAACCCCACCACCAACACCTCCTCCTCCCACTTCAACAGTAATCTCACCAATGAATTCTCATTTCTCCGCACTTTCCTCCACCGACACCCTCCAAATCATCTTCCAGAACCTTCCCATCCCCGATCTCGCACGTGCGAGTTGCGTCTGCCGAGTCTGGAACTCGGTAGCCTCACAAAGGGAGATGGTAACCAGAGCTTTCTTAGCACCGTGGAAATTGAAGGACGTAGTTGGAAACCCGATTTCTAGAAGCTTCTGGAGAGATAATTCACTTGCTAAATTCGCAATCTCGCATCGTATTGTGCGTGGTGATAGTGTTGCTAGTCTCGCCGTTAAGTACTCCGTTCAGGTGATGGACATAAAACGATTGAACAACATGATGAGCGATCATGGTATATACTCAAGGGAAAGGTTATTAATTCCTATTAGTAATCCCGATATTCTTGTTAAAAGAACTTGCTTTATTGAGCTGGATGTTAATGCGAAACGAGAAGTTGCAGTGTTGTATCCGGATGATGTACCTGACATAAAGAGTAGCTATGTATCAAACAGAATATCCTCAGAAGAAACCAACAAAAAGGTGCTTGATTCCTTGAAGAGAAGCATGCAAGTTGATAGTGAAACTGCTCAATACTACTGGTCTGTTTCAAACGGTGATCCTCGTGCTGCTCTTGCTGAATTTTCCGCGGACCTTCAGTGGGGCAGGCAAGTAGGTCACTCCTAG

Protein sequence

>Msa0032960

MGCCCDEDDGDILRHLMNSSSSFSSTSTPPPTPPPPTSTVISPMNSHFSALSSTDTLQIIFQNLPIPDLARASCVCRVWNSVASQREMVTRAFLAPWKLKDVVGNPISRSFWRDNSLAKFAISHRIVRGDSVASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPISNPDILVKRTCFIELDVNAKREVAVLYPDDVPDIKSSYVSNRISSEETNKKVLDSLKRSMQVDSETAQYYWSVSNGDPRAALAEFSADLQWGRQVGHS*