Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092030 | QSD99540.1 | 83.333 | 48 | 8 | 0 | 1 | 48 | 14 | 61 | 2.33e-17 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092030 | A0A896WBP0 | 83.333 | 48 | 8 | 0 | 1 | 48 | 14 | 61 | 1.11e-17 | 83.6 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0092030 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0092030 | Msa0092120 | 0.984263 | 4.694771e-160 | -8.615850e-47 |
| Msa0092030 | Msa0165250 | 0.821226 | 4.517932e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092030 | MtrunA17_Chr1g0209661 | 68.889 | 45 | 14 | 0 | 4 | 48 | 21 | 65 | 1.21e-13 | 63.5 |
| Msa0092030 | MtrunA17_Chr2g0293911 | 58.333 | 48 | 20 | 0 | 1 | 48 | 15 | 62 | 6.17e-11 | 55.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 134 sgRNAs with CRISPR-Local
Find 470 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAATAAAACTGATGTTTC+TGG | 0.157585 | 1_2:+74235923 | None:intergenic |
| ATTAGCTTCAATTTCATAAA+AGG | 0.203724 | 1_2:+74238750 | None:intergenic |
| TTGCAGACACTTTGTATCTT+TGG | 0.207166 | 1_2:-74237363 | Msa0092030:three_prime_UTR |
| AGGTGATAAATGCTGCTTTC+AGG | 0.246271 | 1_2:+74235799 | None:intergenic |
| TGCAGACACTTTGTATCTTT+GGG | 0.250970 | 1_2:-74237362 | Msa0092030:three_prime_UTR |
| TAGATATTGCTGAGATTGTT+AGG | 0.256929 | 1_2:-74235904 | Msa0092030:three_prime_UTR |
| GGAACATCAGCTTTGCATTC+TGG | 0.283596 | 1_2:+74241686 | None:intergenic |
| GGTTAAAATCCGCTTATTCT+TGG | 0.310024 | 1_2:+74237002 | None:intergenic |
| ACCAAGGTGATGATGAAGTT+TGG | 0.323604 | 1_2:+74237960 | None:intergenic |
| CGTTCTTCAGATGTACTGTT+TGG | 0.329382 | 1_2:+74240429 | None:intergenic |
| AAGCTAATCAATCAAAACTT+TGG | 0.335623 | 1_2:-74238735 | Msa0092030:three_prime_UTR |
| TTTACCAAAGAAGGATCTAT+TGG | 0.337174 | 1_2:+74239153 | None:intergenic |
| AATTTCTTGGCTACGAGTTC+AGG | 0.341882 | 1_2:-74243821 | Msa0092030:intron |
| TGTTATTTACTGCAGTTGTC+GGG | 0.344456 | 1_2:+74237130 | None:intergenic |
| AAGATGATAATGAGCTTAGA+AGG | 0.344977 | 1_2:-74243913 | Msa0092030:CDS |
| TCGTACTTAGCAAAGATGTT+TGG | 0.347971 | 1_2:+74237180 | None:intergenic |
| TAAAGAAGCATTGAAAATTC+AGG | 0.354516 | 1_2:-74236806 | Msa0092030:three_prime_UTR |
| CATAACAGAGAGAGAACTTC+AGG | 0.356856 | 1_2:-74238053 | Msa0092030:intron |
| GGAATGAAATTACCTTGTTC+AGG | 0.359907 | 1_2:+74236776 | None:intergenic |
| GCTTGGTTGGACAATGATAT+TGG | 0.362000 | 1_2:-74238694 | Msa0092030:three_prime_UTR |
| AGCTAATCAATCAAAACTTT+GGG | 0.364180 | 1_2:-74238734 | Msa0092030:three_prime_UTR |
| CCAGCCAATAGATCCTTCTT+TGG | 0.364262 | 1_2:-74239157 | Msa0092030:three_prime_UTR |
| CATACCTCCCCTTTGATTGA+AGG | 0.365247 | 1_2:+74240477 | None:intergenic |
| GAATGATATTTGCTCACCTT+TGG | 0.371946 | 1_2:-74238567 | Msa0092030:three_prime_UTR |
| CGTACTTAGCAAAGATGTTT+GGG | 0.372522 | 1_2:+74237181 | None:intergenic |
| AACAAAGTTCTGCAGCAATA+TGG | 0.373710 | 1_2:-74237111 | Msa0092030:three_prime_UTR |
| AGGGTCACGGCAACTTCAAT+GGG | 0.375879 | 1_2:-74238033 | Msa0092030:three_prime_UTR |
| CCAAGGTGATGATGAAGTTT+GGG | 0.382258 | 1_2:+74237961 | None:intergenic |
| TTGTTATTTACTGCAGTTGT+CGG | 0.385817 | 1_2:+74237129 | None:intergenic |
| AGAATGAAGCAGATTGCTTT+TGG | 0.392479 | 1_2:-74238532 | Msa0092030:three_prime_UTR |
| AGGCTTCAGTTGCTCCTGAC+TGG | 0.393517 | 1_2:-74236057 | Msa0092030:three_prime_UTR |
| TGAAGGGAGATGGAATTTCT+TGG | 0.396627 | 1_2:-74243834 | Msa0092030:CDS |
| AATTGAAATAAAGAAAATAA+TGG | 0.398363 | 1_2:+74236034 | None:intergenic |
| AGTGTTCTTATGATGCGTTC+TGG | 0.398602 | 1_2:-74241743 | Msa0092030:three_prime_UTR |
| ATTCCATGCCCCACATCAAC+TGG | 0.401936 | 1_2:+74237208 | None:intergenic |
| CAGGGTCACGGCAACTTCAA+TGG | 0.403253 | 1_2:-74238034 | Msa0092030:three_prime_UTR |
| AATTTCGCAGAGGATTTAGA+TGG | 0.409934 | 1_2:-74237445 | Msa0092030:intron |
| GTCTTAATCTTTACCAAAGA+AGG | 0.418418 | 1_2:+74239144 | None:intergenic |
| AAAGAAAATAATGGCCAGTC+AGG | 0.422485 | 1_2:+74236043 | None:intergenic |
| AGATATTGCTGAGATTGTTA+GGG | 0.423861 | 1_2:-74235903 | Msa0092030:three_prime_UTR |
| AATCTTTGAATTCTTCAATA+CGG | 0.430454 | 1_2:-74235966 | Msa0092030:three_prime_UTR |
| TGGTTGCGCGTGATCTTCCC+AGG | 0.443101 | 1_2:-74236077 | Msa0092030:three_prime_UTR |
| AGTCAGGAGCAACTGAAGCC+TGG | 0.445837 | 1_2:+74236059 | None:intergenic |
| ATTTAATGAAGAAGGTCGTT+TGG | 0.446674 | 1_2:-74240980 | Msa0092030:three_prime_UTR |
| GCTTTGCATTCTGGTCGAAT+GGG | 0.450111 | 1_2:+74241695 | None:intergenic |
| AGCTTTGCATTCTGGTCGAA+TGG | 0.451360 | 1_2:+74241694 | None:intergenic |
| CTTCAATCAAAGGGGAGGTA+TGG | 0.455332 | 1_2:-74240476 | Msa0092030:three_prime_UTR |
| GTGTCCATCCTTCAATCAAA+GGG | 0.456060 | 1_2:-74240485 | Msa0092030:three_prime_UTR |
| AAACTATCTCTTCAGATCTT+GGG | 0.457129 | 1_2:-74236865 | Msa0092030:intron |
| CTTGGTTTAAATCGAGTTGT+TGG | 0.459273 | 1_2:+74241665 | None:intergenic |
| CTTTGCGTTTCGCATGCTGA+TGG | 0.461102 | 1_2:-74237410 | Msa0092030:three_prime_UTR |
| AGGTTGGAGTAGTTGATGAT+TGG | 0.461139 | 1_2:-74241782 | Msa0092030:CDS |
| AATCTAATGTTGTTCGGTCA+TGG | 0.464150 | 1_2:+74236125 | None:intergenic |
| CTGCAAAAGAAAATTCTCTT+CGG | 0.465835 | 1_2:+74237380 | None:intergenic |
| ACAGAAAATCTAATGTTGTT+CGG | 0.475229 | 1_2:+74236119 | None:intergenic |
| TTTAACCGAGGCCAAGGGTG+TGG | 0.488018 | 1_2:-74236986 | Msa0092030:three_prime_UTR |
| ACACCCCTCGTCGGTGATGA+TGG | 0.491285 | 1_2:-74239180 | Msa0092030:three_prime_UTR |
| AATTCAGCATTTAATGAAGA+AGG | 0.491910 | 1_2:-74240988 | Msa0092030:three_prime_UTR |
| GACAACATCATCCACACCCT+TGG | 0.493741 | 1_2:+74236975 | None:intergenic |
| CTAATCACGGTGAAGGGAGA+TGG | 0.494762 | 1_2:-74243844 | Msa0092030:CDS |
| CTGCAGTTATTACATCAGAT+TGG | 0.495324 | 1_2:-74239096 | Msa0092030:intron |
| ACTTTCATAAGTTGTAACAT+AGG | 0.496779 | 1_2:-74235836 | Msa0092030:three_prime_UTR |
| AGACTTTAAGTGCAAGAAGA+TGG | 0.503037 | 1_2:-74241011 | Msa0092030:three_prime_UTR |
| TTCAATCAAAGGGGAGGTAT+GGG | 0.503151 | 1_2:-74240475 | Msa0092030:three_prime_UTR |
| GAGTAGTTGATGATTGGTTG+TGG | 0.504825 | 1_2:-74241776 | Msa0092030:CDS |
| GTCAGGAGCAACTGAAGCCT+GGG | 0.508230 | 1_2:+74236060 | None:intergenic |
| GAGGTATGGGAGTTCTTACT+AGG | 0.509597 | 1_2:-74240462 | Msa0092030:three_prime_UTR |
| TCTATCGATTTATGCTTGGT+TGG | 0.517744 | 1_2:-74238707 | Msa0092030:three_prime_UTR |
| CCAAAGAAGGATCTATTGGC+TGG | 0.519514 | 1_2:+74239157 | None:intergenic |
| TAGATTGTTTCCAGTTGATG+TGG | 0.522281 | 1_2:-74237218 | Msa0092030:three_prime_UTR |
| ATCATCCACACCCTTGGCCT+CGG | 0.523840 | 1_2:+74236981 | None:intergenic |
| TAGTTGATGATTGGTTGTGG+TGG | 0.526635 | 1_2:-74241773 | Msa0092030:CDS |
| TTTCCAGTTGATGTGGGGCA+TGG | 0.528620 | 1_2:-74237211 | Msa0092030:three_prime_UTR |
| ATGAGCTTAGAAGGAGACCT+TGG | 0.529929 | 1_2:-74243904 | Msa0092030:CDS |
| ATGTTCTATCGATTTATGCT+TGG | 0.530760 | 1_2:-74238711 | Msa0092030:three_prime_UTR |
| CAAAAGATAGTCCCAGTCCT+TGG | 0.534490 | 1_2:-74239222 | Msa0092030:three_prime_UTR |
| ACTGTTGGAATTGAAGAGGT+TGG | 0.539877 | 1_2:-74241798 | Msa0092030:CDS |
| ATAGCAAATAGAAACACTGT+TGG | 0.541783 | 1_2:-74241813 | Msa0092030:CDS |
| ATAGTCCCAGTCCTTGGTAG+TGG | 0.544048 | 1_2:-74239216 | Msa0092030:three_prime_UTR |
| TTCGCAGAGGATTTAGATGG+TGG | 0.544888 | 1_2:-74237442 | Msa0092030:intron |
| AATTTCCCACTACCAAGGAC+TGG | 0.551856 | 1_2:+74239210 | None:intergenic |
| GGTGTCCATCCTTCAATCAA+AGG | 0.554064 | 1_2:-74240486 | Msa0092030:three_prime_UTR |
| CACATTGCTAATCACGGTGA+AGG | 0.557400 | 1_2:-74243851 | Msa0092030:CDS |
| AATGATATTGGTTACGTACA+AGG | 0.559481 | 1_2:-74238682 | Msa0092030:intron |
| CACAGAAGAAAATAGTGCAC+TGG | 0.560074 | 1_2:-74237055 | Msa0092030:three_prime_UTR |
| GTTATTTACTGCAGTTGTCG+GGG | 0.562804 | 1_2:+74237131 | None:intergenic |
| TCATCCTCTTCAAGAGTCCA+AGG | 0.566218 | 1_2:+74243887 | None:intergenic |
| AGATTGTTTCCAGTTGATGT+GGG | 0.569904 | 1_2:-74237217 | Msa0092030:three_prime_UTR |
| TTCTTGAGACCAAGAATAAG+CGG | 0.570669 | 1_2:-74237011 | Msa0092030:three_prime_UTR |
| AAAGATTTAGAATCGACTTG+AGG | 0.581927 | 1_2:+74235982 | None:intergenic |
| CTGGCCATCATCACCGACGA+GGG | 0.583759 | 1_2:+74239176 | None:intergenic |
| CCTCCCCTTTGATTGAAGGA+TGG | 0.584741 | 1_2:+74240481 | None:intergenic |
| TGACCGTGCGATGCGAAGGA+TGG | 0.584801 | 1_2:-74238504 | Msa0092030:intron |
| CCCAAACTTCATCATCACCT+TGG | 0.586296 | 1_2:-74237961 | Msa0092030:intron |
| AAACACTGTTGGAATTGAAG+AGG | 0.587307 | 1_2:-74241802 | Msa0092030:CDS |
| GCTTTGACCGTGCGATGCGA+AGG | 0.590644 | 1_2:-74238508 | Msa0092030:three_prime_UTR |
| CAACAACTCGATTTAAACCA+AGG | 0.590717 | 1_2:-74241664 | Msa0092030:three_prime_UTR |
| ACATTGCTAATCACGGTGAA+GGG | 0.599784 | 1_2:-74243850 | Msa0092030:CDS |
| CTTTGCATTCTGGTCGAATG+GGG | 0.600210 | 1_2:+74241696 | None:intergenic |
| GAGAGAGAACTTCAGGGTCA+CGG | 0.600516 | 1_2:-74238046 | Msa0092030:three_prime_UTR |
| ATCAAGCACATTGCTAATCA+CGG | 0.601388 | 1_2:-74243857 | Msa0092030:CDS |
| TAGTCCCAGTCCTTGGTAGT+GGG | 0.603102 | 1_2:-74239215 | Msa0092030:three_prime_UTR |
| TTCTGAGACGAATACAGCGA+GGG | 0.604305 | 1_2:-74240945 | Msa0092030:three_prime_UTR |
| TTTCATAAAAGGCAAGTGCT+CGG | 0.605214 | 1_2:+74238761 | None:intergenic |
| CTACCATCCTTCGCATCGCA+CGG | 0.607222 | 1_2:+74238501 | None:intergenic |
| ATAACAGAGAGAGAACTTCA+GGG | 0.610985 | 1_2:-74238052 | Msa0092030:intron |
| GATTGTTTCCAGTTGATGTG+GGG | 0.616381 | 1_2:-74237216 | Msa0092030:three_prime_UTR |
| AACAACTCGATTTAAACCAA+GGG | 0.617507 | 1_2:-74241663 | Msa0092030:intron |
| GAGACCTTGGACTCTTGAAG+AGG | 0.623367 | 1_2:-74243891 | Msa0092030:CDS |
| TAACAAATTTCCCACTACCA+AGG | 0.624907 | 1_2:+74239205 | None:intergenic |
| AGACACTTTGTATCTTTGGG+AGG | 0.625099 | 1_2:-74237359 | Msa0092030:intron |
| GATATTGCTGAGATTGTTAG+GGG | 0.626948 | 1_2:-74235902 | Msa0092030:three_prime_UTR |
| TGGCCATCATCACCGACGAG+GGG | 0.627189 | 1_2:+74239177 | None:intergenic |
| GGGTGTGGATGATGTTGTCA+AGG | 0.632112 | 1_2:-74236971 | Msa0092030:intron |
| ATTTCCCACTACCAAGGACT+GGG | 0.635175 | 1_2:+74239211 | None:intergenic |
| GCTAAGTACGAGGATCCAGA+TGG | 0.638060 | 1_2:-74237168 | Msa0092030:three_prime_UTR |
| TGTGCAGAAAATGATCGTGA+TGG | 0.639975 | 1_2:-74241840 | Msa0092030:intron |
| CAGATAAGAAAGTTGTGCAG+TGG | 0.644760 | 1_2:-74239119 | Msa0092030:three_prime_UTR |
| GGAATGAGCTCAAGCAACGC+CGG | 0.647980 | 1_2:-74240407 | Msa0092030:three_prime_UTR |
| TAACGATATGATGGCAGCTG+TGG | 0.651752 | 1_2:-74236097 | Msa0092030:three_prime_UTR |
| CAAACAGTACATCTGAAGAA+CGG | 0.654428 | 1_2:-74240428 | Msa0092030:three_prime_UTR |
| TTCTCAATAAGAATAACCAA+AGG | 0.664555 | 1_2:+74238551 | None:intergenic |
| CCATCCTTCAATCAAAGGGG+AGG | 0.665030 | 1_2:-74240481 | Msa0092030:three_prime_UTR |
| GGGTCACGGCAACTTCAATG+GGG | 0.667044 | 1_2:-74238032 | Msa0092030:three_prime_UTR |
| TTTGTTACAACACCCCTCGT+CGG | 0.671778 | 1_2:-74239189 | Msa0092030:three_prime_UTR |
| GCTGGCCATCATCACCGACG+AGG | 0.684089 | 1_2:+74239175 | None:intergenic |
| TCTGAGACGAATACAGCGAG+GGG | 0.696888 | 1_2:-74240944 | Msa0092030:intron |
| ATGAGCTCAAGCAACGCCGG+AGG | 0.701330 | 1_2:-74240404 | Msa0092030:intron |
| GGTCACGGCAACTTCAATGG+GGG | 0.701438 | 1_2:-74238031 | Msa0092030:three_prime_UTR |
| ATATTGCTGAGATTGTTAGG+GGG | 0.709862 | 1_2:-74235901 | Msa0092030:three_prime_UTR |
| GATTAGCAATGTGCTTGATG+AGG | 0.712205 | 1_2:+74243861 | None:intergenic |
| GTTCTGAGACGAATACAGCG+AGG | 0.713018 | 1_2:-74240946 | Msa0092030:three_prime_UTR |
| TGTCCATCCTTCAATCAAAG+GGG | 0.719618 | 1_2:-74240484 | Msa0092030:three_prime_UTR |
| AAACATCTTTGCTAAGTACG+AGG | 0.721179 | 1_2:-74237178 | Msa0092030:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTATAATTTTTTAA+GGG | + | chr1_2:74236461-74236480 | None:intergenic | 0.0% |
| !!! | TATTTATTTATAATTTTTTA+AGG | + | chr1_2:74236462-74236481 | None:intergenic | 0.0% |
| !!! | AATTAAATCTTTTTTGATTT+GGG | - | chr1_2:74236019-74236038 | Msa0092030:three_prime_UTR | 10.0% |
| !!! | ATTTAAAATCTTTTTTGATT+TGG | - | chr1_2:74236086-74236105 | Msa0092030:three_prime_UTR | 10.0% |
| !!! | TTTAAAATCTTTTTTGATTT+GGG | - | chr1_2:74236087-74236106 | Msa0092030:three_prime_UTR | 10.0% |
| !! | ATTACCAAAAATAAAAAATA+GGG | + | chr1_2:74236675-74236694 | None:intergenic | 10.0% |
| !! | TATTACCAAAAATAAAAAAT+AGG | + | chr1_2:74236676-74236695 | None:intergenic | 10.0% |
| !!! | AAAATTGATTTTTTTTTTGT+TGG | - | chr1_2:74237848-74237867 | Msa0092030:intron | 10.0% |
| !!! | AAATTGATTTTTTTTTTGTT+GGG | - | chr1_2:74237849-74237868 | Msa0092030:intron | 10.0% |
| !! | TATATAATAACAATATTTGT+GGG | + | chr1_2:74238590-74238609 | None:intergenic | 10.0% |
| !! | ATATATAATAACAATATTTG+TGG | + | chr1_2:74238591-74238610 | None:intergenic | 10.0% |
| !!! | AAGATAAATTTTAATCAAAA+CGG | + | chr1_2:74238659-74238678 | None:intergenic | 10.0% |
| !!! | AAAACTCAATTATATTTTTT+AGG | - | chr1_2:74240668-74240687 | Msa0092030:intron | 10.0% |
| !! | AAGTAAATTTGTATAAAAAT+GGG | - | chr1_2:74240737-74240756 | Msa0092030:intron | 10.0% |
| !! | TTTAACATTAAAAAATTGAA+AGG | + | chr1_2:74241077-74241096 | None:intergenic | 10.0% |
| !! | AATTGAAATAAAGAAAATAA+TGG | + | chr1_2:74243690-74243709 | None:intergenic | 10.0% |
| !!! | AAAACTTTTATTTATTGTAT+TGG | - | chr1_2:74243844-74243863 | Msa0092030:CDS | 10.0% |
| !!! | GAATTAAATCTTTTTTGATT+TGG | - | chr1_2:74236018-74236037 | Msa0092030:three_prime_UTR | 15.0% |
| !! | AATTTAGCTATATTAATCTA+CGG | + | chr1_2:74236066-74236085 | None:intergenic | 15.0% |
| !! | AATTTAGCTATATTAATCTA+CGG | + | chr1_2:74236066-74236085 | None:intergenic | 15.0% |
| !!! | ATTACATATCTTAGTTTTTT+TGG | - | chr1_2:74236223-74236242 | Msa0092030:intron | 15.0% |
| !!! | TTTTCTTTTATTTTTACTCT+TGG | - | chr1_2:74236891-74236910 | Msa0092030:intron | 15.0% |
| !! | GTATGGTTATATAATATATA+CGG | + | chr1_2:74237455-74237474 | None:intergenic | 15.0% |
| !!! | TATATAAGCTTTTTTCTTAA+CGG | + | chr1_2:74237562-74237581 | None:intergenic | 15.0% |
| !! | TTTCAATTAAATGTTTATGT+AGG | - | chr1_2:74239345-74239364 | Msa0092030:intron | 15.0% |
| !! | ATGATAATAACAAAGAAATA+TGG | - | chr1_2:74240023-74240042 | Msa0092030:intron | 15.0% |
| !! | ATAAAGATAAAAAAAAAAGG+AGG | + | chr1_2:74240397-74240416 | None:intergenic | 15.0% |
| !! | TTAATGTAAATTATTATCCA+GGG | - | chr1_2:74240447-74240466 | Msa0092030:three_prime_UTR | 15.0% |
| !! | GAAGTAAATTTGTATAAAAA+TGG | - | chr1_2:74240736-74240755 | Msa0092030:intron | 15.0% |
| !!! | AAAATTAACAACAGATTTTA+AGG | + | chr1_2:74241325-74241344 | None:intergenic | 15.0% |
| !! | AAATAGAAAACAAAGTAAAA+AGG | - | chr1_2:74241556-74241575 | Msa0092030:intron | 15.0% |
| !!! | TTTTTTATTTTATGCCTTTT+TGG | - | chr1_2:74242975-74242994 | Msa0092030:intron | 15.0% |
| !! | CAAACAAAATTGAAAAATTA+AGG | + | chr1_2:74243226-74243245 | None:intergenic | 15.0% |
| !! | CAAACAAAATTGAAAAATTA+AGG | + | chr1_2:74243226-74243245 | None:intergenic | 15.0% |
| !!! | TCTTAGTTAGTCTTAATTAA+AGG | - | chr1_2:74236323-74236342 | Msa0092030:intron | 20.0% |
| !! | GTAATAACAATAGTCATTAT+AGG | - | chr1_2:74236690-74236709 | Msa0092030:intron | 20.0% |
| !! | TAGGTTATAAACAAATGTAT+TGG | + | chr1_2:74236742-74236761 | None:intergenic | 20.0% |
| !!! | ATAATTTTATAACGAGCTTA+TGG | - | chr1_2:74236794-74236813 | Msa0092030:three_prime_UTR | 20.0% |
| !! | AAATGTGATATTTCATATCT+TGG | + | chr1_2:74236990-74237009 | None:intergenic | 20.0% |
| !! | AAGAATACTTTCAATTTAAG+TGG | - | chr1_2:74237216-74237235 | Msa0092030:three_prime_UTR | 20.0% |
| !! | TCACTTAAAATTAATTAGTG+TGG | - | chr1_2:74237429-74237448 | Msa0092030:three_prime_UTR | 20.0% |
| !!! | TTTTCATCAATATCCTATTT+TGG | + | chr1_2:74237526-74237545 | None:intergenic | 20.0% |
| !!! | TTTGATATAAAAGTGCATTT+GGG | + | chr1_2:74238102-74238121 | None:intergenic | 20.0% |
| !!! | ATTTGATATAAAAGTGCATT+TGG | + | chr1_2:74238103-74238122 | None:intergenic | 20.0% |
| !! | CAATAGCATACTATTTATTA+GGG | + | chr1_2:74238224-74238243 | None:intergenic | 20.0% |
| !!! | TTTTTTAACTCTTTTTTGGT+AGG | - | chr1_2:74238483-74238502 | Msa0092030:intron | 20.0% |
| !! | TTTCTTTCTATACATTATGT+AGG | - | chr1_2:74239213-74239232 | Msa0092030:three_prime_UTR | 20.0% |
| !! | TTCTTTCTATACATTATGTA+GGG | - | chr1_2:74239214-74239233 | Msa0092030:three_prime_UTR | 20.0% |
| !! | TTTAATTGAAAATATACCTC+CGG | + | chr1_2:74239336-74239355 | None:intergenic | 20.0% |
| !!! | AGCCTTTTGTAAAATTAATT+GGG | + | chr1_2:74239822-74239841 | None:intergenic | 20.0% |
| !!! | AAGCCTTTTGTAAAATTAAT+TGG | + | chr1_2:74239823-74239842 | None:intergenic | 20.0% |
| !! | TATAACTTATTATCTAACAC+AGG | - | chr1_2:74239842-74239861 | Msa0092030:intron | 20.0% |
| !! | ATAACTTATTATCTAACACA+GGG | - | chr1_2:74239843-74239862 | Msa0092030:intron | 20.0% |
| !!! | CTTGTCTAGAATAAATATAA+GGG | + | chr1_2:74239970-74239989 | None:intergenic | 20.0% |
| !!! | TCTTGTCTAGAATAAATATA+AGG | + | chr1_2:74239971-74239990 | None:intergenic | 20.0% |
| !! | ATATTATGCTCATATTCTTT+GGG | + | chr1_2:74240275-74240294 | None:intergenic | 20.0% |
| !! | AATATTATGCTCATATTCTT+TGG | + | chr1_2:74240276-74240295 | None:intergenic | 20.0% |
| !! | AAAGAATATGAGCATAATAT+TGG | - | chr1_2:74240275-74240294 | Msa0092030:intron | 20.0% |
| !! | AAGAATATGAGCATAATATT+GGG | - | chr1_2:74240276-74240295 | Msa0092030:intron | 20.0% |
| !!! | CTTTTACTGATTTTTCTAAT+AGG | - | chr1_2:74240326-74240345 | Msa0092030:intron | 20.0% |
| !! | CTTAATGTAAATTATTATCC+AGG | - | chr1_2:74240446-74240465 | Msa0092030:three_prime_UTR | 20.0% |
| !! | TAATGTAAATTATTATCCAG+GGG | - | chr1_2:74240448-74240467 | Msa0092030:three_prime_UTR | 20.0% |
| !! | CCAAACATAATAAAAAAAAC+AGG | + | chr1_2:74240865-74240884 | None:intergenic | 20.0% |
| !!! | CCTGTTTTTTTTATTATGTT+TGG | - | chr1_2:74240862-74240881 | Msa0092030:intron | 20.0% |
| !!! | AATTGATTATTTTGCATTGT+AGG | - | chr1_2:74240916-74240935 | Msa0092030:intron | 20.0% |
| !!! | ATTAGCTTCAATTTCATAAA+AGG | + | chr1_2:74240974-74240993 | None:intergenic | 20.0% |
| !! | GAAATTTCAGATATTCTTAA+TGG | - | chr1_2:74241111-74241130 | Msa0092030:intron | 20.0% |
| !! | GTGAAAAGAATAAAATATTG+TGG | + | chr1_2:74241514-74241533 | None:intergenic | 20.0% |
| !! | AATGTAGAAAGTAAAAACAA+CGG | + | chr1_2:74241635-74241654 | None:intergenic | 20.0% |
| !!! | TGGTTGAAGTTTTTTTTTTA+AGG | - | chr1_2:74241885-74241904 | Msa0092030:intron | 20.0% |
| !!! | GGTTGAAGTTTTTTTTTTAA+GGG | - | chr1_2:74241886-74241905 | Msa0092030:intron | 20.0% |
| !!! | GTTGAAGTTTTTTTTTTAAG+GGG | - | chr1_2:74241887-74241906 | Msa0092030:intron | 20.0% |
| !!! | TTGAAGTTTTTTTTTTAAGG+GGG | - | chr1_2:74241888-74241907 | Msa0092030:intron | 20.0% |
| !! | AAATTAAAAGAGATAAAGGT+TGG | + | chr1_2:74242261-74242280 | None:intergenic | 20.0% |
| !! | CATAAAATAAAAAATTCAGC+AGG | + | chr1_2:74242969-74242988 | None:intergenic | 20.0% |
| !! | AATTCCCAATTTGTAATTAA+AGG | + | chr1_2:74243034-74243053 | None:intergenic | 20.0% |
| !!! | TGTTTTTCATGTATATGTAA+AGG | - | chr1_2:74243071-74243090 | Msa0092030:intron | 20.0% |
| !!! | AAATTTTCACATATCTAGTA+AGG | + | chr1_2:74243544-74243563 | None:intergenic | 20.0% |
| !! | AATCTTTGAATTCTTCAATA+CGG | - | chr1_2:74243755-74243774 | Msa0092030:intron | 20.0% |
| !!! | CAATTACATATCTTTAAAGC+CGG | - | chr1_2:74236182-74236201 | Msa0092030:intron | 25.0% |
| !!! | ACATATCTTAGTTTTTTTGG+TGG | - | chr1_2:74236226-74236245 | Msa0092030:intron | 25.0% |
| ! | AACAATGCATAATATATGCA+AGG | + | chr1_2:74236271-74236290 | None:intergenic | 25.0% |
| !!! | TGTCTTAAGAACACTTTTTA+AGG | + | chr1_2:74236425-74236444 | None:intergenic | 25.0% |
| !!! | AAAAAGTAATGGATGAACAT+AGG | + | chr1_2:74236640-74236659 | None:intergenic | 25.0% |
| !!! | TCCATTACTTTTTAAGTCAA+AGG | - | chr1_2:74236647-74236666 | Msa0092030:intron | 25.0% |
| !!! | GTCATTATAGGCTTTTTTTA+AGG | - | chr1_2:74236702-74236721 | Msa0092030:intron | 25.0% |
| !!! | AATATCCTATTTTGGAAGAA+GGG | + | chr1_2:74237518-74237537 | None:intergenic | 25.0% |
| !!! | CAATTTTTTCTTTGATGACA+GGG | + | chr1_2:74237835-74237854 | None:intergenic | 25.0% |
| !!! | TCAATTTTTTCTTTGATGAC+AGG | + | chr1_2:74237836-74237855 | None:intergenic | 25.0% |
| ! | ATCCAAAATTGAAATATGTC+CGG | + | chr1_2:74238188-74238207 | None:intergenic | 25.0% |
| ! | GCAATAGCATACTATTTATT+AGG | + | chr1_2:74238225-74238244 | None:intergenic | 25.0% |
| ! | TATTGCATGAATTTATGCTA+AGG | - | chr1_2:74238239-74238258 | Msa0092030:intron | 25.0% |
| !!! | GAGGTTTTTTAACTCTTTTT+TGG | - | chr1_2:74238479-74238498 | Msa0092030:intron | 25.0% |
| ! | AATTCAGCATTTAATGAAGA+AGG | - | chr1_2:74238733-74238752 | Msa0092030:three_prime_UTR | 25.0% |
| ! | ATAACTACCGTTTAATTGTA+TGG | - | chr1_2:74238893-74238912 | Msa0092030:intron | 25.0% |
| ! | AGCTATAACATAAGATAAAG+AGG | - | chr1_2:74239374-74239393 | Msa0092030:intron | 25.0% |
| !! | ATGTTTCTGTTCATAGTATA+TGG | - | chr1_2:74239407-74239426 | Msa0092030:intron | 25.0% |
| ! | TTTAGTCTCGTATAATACAA+TGG | + | chr1_2:74239549-74239568 | None:intergenic | 25.0% |
| !! | AGACTAAAAATTTTACCTCT+TGG | - | chr1_2:74239561-74239580 | Msa0092030:intron | 25.0% |
| !! | TAAAAATTTTACCTCTTGGA+TGG | - | chr1_2:74239565-74239584 | Msa0092030:intron | 25.0% |
| ! | TACAAATGCAAAATAGAGAA+TGG | - | chr1_2:74239682-74239701 | Msa0092030:intron | 25.0% |
| ! | ACAAATGCAAAATAGAGAAT+GGG | - | chr1_2:74239683-74239702 | Msa0092030:intron | 25.0% |
| ! | TGTAAAATTAATTGGGCTAA+GGG | + | chr1_2:74239815-74239834 | None:intergenic | 25.0% |
| ! | TTGTAAAATTAATTGGGCTA+AGG | + | chr1_2:74239816-74239835 | None:intergenic | 25.0% |
| !! | AGCCCAATTAATTTTACAAA+AGG | - | chr1_2:74239817-74239836 | Msa0092030:intron | 25.0% |
| ! | AAGACTTTCAATTATGATCA+TGG | - | chr1_2:74239895-74239914 | Msa0092030:intron | 25.0% |
| ! | ATCAGTAAAAGATTATTACG+AGG | + | chr1_2:74240317-74240336 | None:intergenic | 25.0% |
| ! | AAAAAAGGAGGAAAAAACAT+GGG | + | chr1_2:74240385-74240404 | None:intergenic | 25.0% |
| ! | AAAAAAAGGAGGAAAAAACA+TGG | + | chr1_2:74240386-74240405 | None:intergenic | 25.0% |
| ! | AATGTAAATTATTATCCAGG+GGG | - | chr1_2:74240449-74240468 | Msa0092030:three_prime_UTR | 25.0% |
| ! | TTTATTAACCAATGCTCTTA+GGG | + | chr1_2:74240710-74240729 | None:intergenic | 25.0% |
| !! | CAAGACAAATTTTCCTTTTA+TGG | - | chr1_2:74240799-74240818 | Msa0092030:intron | 25.0% |
| ! | AAGCTAATCAATCAAAACTT+TGG | - | chr1_2:74240986-74241005 | Msa0092030:three_prime_UTR | 25.0% |
| ! | AGCTAATCAATCAAAACTTT+GGG | - | chr1_2:74240987-74241006 | Msa0092030:three_prime_UTR | 25.0% |
| !!! | TAATGGATTATTTCATTTGC+AGG | - | chr1_2:74241128-74241147 | Msa0092030:intron | 25.0% |
| ! | TTCTCAATAAGAATAACCAA+AGG | + | chr1_2:74241173-74241192 | None:intergenic | 25.0% |
| ! | AAATGTTTAATCTCCATTTG+AGG | - | chr1_2:74241365-74241384 | Msa0092030:intron | 25.0% |
| ! | AATGTTTAATCTCCATTTGA+GGG | - | chr1_2:74241366-74241385 | Msa0092030:intron | 25.0% |
| !! | CTTCAAAAACATGCTTTAAA+GGG | + | chr1_2:74241469-74241488 | None:intergenic | 25.0% |
| ! | ACTTCAAAAACATGCTTTAA+AGG | + | chr1_2:74241470-74241489 | None:intergenic | 25.0% |
| !!! | ATGTTTTTGAAGTTTTGTGT+AGG | - | chr1_2:74241477-74241496 | Msa0092030:intron | 25.0% |
| ! | AGAATAAAATATTGTGGTTG+TGG | + | chr1_2:74241508-74241527 | None:intergenic | 25.0% |
| ! | TCAGATATTTGCATAAGAAA+CGG | + | chr1_2:74241536-74241555 | None:intergenic | 25.0% |
| ! | TAGAAAACAAAGTAAAAAGG+TGG | - | chr1_2:74241559-74241578 | Msa0092030:intron | 25.0% |
| ! | ATGTAGAAAGTAAAAACAAC+GGG | + | chr1_2:74241634-74241653 | None:intergenic | 25.0% |
| ! | AATCATATATTCATCTTGCA+AGG | - | chr1_2:74242061-74242080 | Msa0092030:intron | 25.0% |
| !!! | TTGCTTTTGATAACAGAAAA+AGG | - | chr1_2:74242084-74242103 | Msa0092030:intron | 25.0% |
| ! | GTATAAATGTAAGTAAGAGT+AGG | - | chr1_2:74242232-74242251 | Msa0092030:intron | 25.0% |
| ! | TGCGAAATTAAAAGAGATAA+AGG | + | chr1_2:74242265-74242284 | None:intergenic | 25.0% |
| !!! | AAATTGTCACTTTTGTTTTG+AGG | - | chr1_2:74242410-74242429 | Msa0092030:intron | 25.0% |
| ! | ATATGCACATGTATAAGTAA+GGG | + | chr1_2:74242794-74242813 | None:intergenic | 25.0% |
| ! | TATATGCACATGTATAAGTA+AGG | + | chr1_2:74242795-74242814 | None:intergenic | 25.0% |
| !!! | TAAAGAAGCATTGAAAATTC+AGG | - | chr1_2:74242915-74242934 | Msa0092030:intron | 25.0% |
| ! | TTTCGCCTTTAATTACAAAT+TGG | - | chr1_2:74243026-74243045 | Msa0092030:intron | 25.0% |
| ! | TTCGCCTTTAATTACAAATT+GGG | - | chr1_2:74243027-74243046 | Msa0092030:intron | 25.0% |
| !! | GTAGAAAAGATTTTCTGTTA+TGG | + | chr1_2:74243355-74243374 | None:intergenic | 25.0% |
| !!! | TTCTGTTTTTGCATAAACAA+AGG | - | chr1_2:74243492-74243511 | Msa0092030:intron | 25.0% |
| ! | ACAGAAAATCTAATGTTGTT+CGG | + | chr1_2:74243605-74243624 | None:intergenic | 25.0% |
| ! | TCTAATAAAACTGATGTTTC+TGG | + | chr1_2:74243801-74243820 | None:intergenic | 25.0% |
| ! | ACTTTCATAAGTTGTAACAT+AGG | - | chr1_2:74243885-74243904 | Msa0092030:CDS | 25.0% |
| ! | AAGATGATAATGAGCTTAGA+AGG | - | chr1_2:74235808-74235827 | Msa0092030:three_prime_UTR | 30.0% |
| !! | AAGTTTGCTAGTGAAAGATA+TGG | - | chr1_2:74235928-74235947 | Msa0092030:three_prime_UTR | 30.0% |
| TTAAAGCCAGACATAAAGAA+AGG | - | chr1_2:74236156-74236175 | Msa0092030:intron | 30.0% | |
| TTGTTTCCTTTCTTTATGTC+TGG | + | chr1_2:74236165-74236184 | None:intergenic | 30.0% | |
| TTGTTTCCTTTCTTTATGTC+CGG | + | chr1_2:74236165-74236184 | None:intergenic | 30.0% | |
| !!! | ATCTTAGTTTTTTTGGTGGT+CGG | - | chr1_2:74236230-74236249 | Msa0092030:intron | 30.0% |
| !! | TACTCTTAGAGAACTTGTTA+TGG | - | chr1_2:74236536-74236555 | Msa0092030:intron | 30.0% |
| !! | ACTCTTAGAGAACTTGTTAT+GGG | - | chr1_2:74236537-74236556 | Msa0092030:intron | 30.0% |
| ATCGTAACACTGTTTATTGA+GGG | + | chr1_2:74236591-74236610 | None:intergenic | 30.0% | |
| ! | GCCTTTGACTTAAAAAGTAA+TGG | + | chr1_2:74236651-74236670 | None:intergenic | 30.0% |
| !!! | GGCACCCTATTTTTTATTTT+TGG | - | chr1_2:74236668-74236687 | Msa0092030:intron | 30.0% |
| CCTATGTTTCGTAAAACTAA+TGG | + | chr1_2:74237368-74237387 | None:intergenic | 30.0% | |
| !!! | CCATTAGTTTTACGAAACAT+AGG | - | chr1_2:74237365-74237384 | Msa0092030:three_prime_UTR | 30.0% |
| TAACCATACATTCACTAAGT+TGG | - | chr1_2:74237466-74237485 | Msa0092030:intron | 30.0% | |
| TTTCCAACTTAGTGAATGTA+TGG | + | chr1_2:74237472-74237491 | None:intergenic | 30.0% | |
| !! | AGTTGGAAACATTTTGTTTG+AGG | - | chr1_2:74237483-74237502 | Msa0092030:intron | 30.0% |
| ATTAACCCTTCTTCCAAAAT+AGG | - | chr1_2:74237510-74237529 | Msa0092030:intron | 30.0% | |
| !! | CAATATCCTATTTTGGAAGA+AGG | + | chr1_2:74237519-74237538 | None:intergenic | 30.0% |
| ! | CAATGATTTGAGATTGTGAT+TGG | + | chr1_2:74237624-74237643 | None:intergenic | 30.0% |
| ! | CAAATCATTGTTCCATTTTG+CGG | - | chr1_2:74237634-74237653 | Msa0092030:intron | 30.0% |
| GAATAGAATAATCCGCAAAA+TGG | + | chr1_2:74237649-74237668 | None:intergenic | 30.0% | |
| TTTGCAGGATCAGATATAAT+CGG | - | chr1_2:74237779-74237798 | Msa0092030:intron | 30.0% | |
| TGACAGGGAAAAAATCAAAA+GGG | + | chr1_2:74237820-74237839 | None:intergenic | 30.0% | |
| ATGACAGGGAAAAAATCAAA+AGG | + | chr1_2:74237821-74237840 | None:intergenic | 30.0% | |
| ATAGCAAATAGAAACACTGT+TGG | - | chr1_2:74237908-74237927 | Msa0092030:intron | 30.0% | |
| AACAACTCGATTTAAACCAA+GGG | - | chr1_2:74238058-74238077 | Msa0092030:intron | 30.0% | |
| TCCAAAATTGAAATATGTCC+GGG | + | chr1_2:74238187-74238206 | None:intergenic | 30.0% | |
| CATCAAATAGCAGTTATAGT+GGG | + | chr1_2:74238341-74238360 | None:intergenic | 30.0% | |
| TCATCAAATAGCAGTTATAG+TGG | + | chr1_2:74238342-74238361 | None:intergenic | 30.0% | |
| ACAACATTAGACTAACAAGT+TGG | + | chr1_2:74238542-74238561 | None:intergenic | 30.0% | |
| TTATATATACTTGAGCGAGT+TGG | - | chr1_2:74238603-74238622 | Msa0092030:intron | 30.0% | |
| ATTTAATGAAGAAGGTCGTT+TGG | - | chr1_2:74238741-74238760 | Msa0092030:three_prime_UTR | 30.0% | |
| ATACAGAAAAACTCACAAAC+AGG | + | chr1_2:74238849-74238868 | None:intergenic | 30.0% | |
| ! | TGAGTTTTTCTGTATGTTTG+TGG | - | chr1_2:74238854-74238873 | Msa0092030:intron | 30.0% |
| ! | GAGTTTTTCTGTATGTTTGT+GGG | - | chr1_2:74238855-74238874 | Msa0092030:intron | 30.0% |
| AGAGTCACCATACAATTAAA+CGG | + | chr1_2:74238903-74238922 | None:intergenic | 30.0% | |
| AGAAAAATGTCTGATGCAAA+TGG | + | chr1_2:74238965-74238984 | None:intergenic | 30.0% | |
| ! | GACATTTTTCTATGTGAAAG+AGG | - | chr1_2:74238974-74238993 | Msa0092030:intron | 30.0% |
| AGGAAATAACCACAATGATT+AGG | + | chr1_2:74239487-74239506 | None:intergenic | 30.0% | |
| ACAATCGCAGAAATAGAAAT+AGG | + | chr1_2:74239507-74239526 | None:intergenic | 30.0% | |
| AATTCTCGTGTTGAAGTTAT+AGG | - | chr1_2:74239649-74239668 | Msa0092030:intron | 30.0% | |
| ATTCTCGTGTTGAAGTTATA+GGG | - | chr1_2:74239650-74239669 | Msa0092030:intron | 30.0% | |
| !!! | CTCTTATTTTGACAAGCTAT+TGG | + | chr1_2:74239741-74239760 | None:intergenic | 30.0% |
| ! | CAATAGCTTGTCAAAATAAG+AGG | - | chr1_2:74239739-74239758 | Msa0092030:intron | 30.0% |
| !!! | ATTTGTTTTGCTACTCAACT+AGG | + | chr1_2:74240002-74240021 | None:intergenic | 30.0% |
| ATACAAAATCCCTTCGAAAT+CGG | + | chr1_2:74240098-74240117 | None:intergenic | 30.0% | |
| AGATTATTACGAGGAAACAT+GGG | + | chr1_2:74240308-74240327 | None:intergenic | 30.0% | |
| AAGATTATTACGAGGAAACA+TGG | + | chr1_2:74240309-74240328 | None:intergenic | 30.0% | |
| ! | TGATTTTTCTAATAGGCATC+TGG | - | chr1_2:74240333-74240352 | Msa0092030:intron | 30.0% |
| TTTACCAAAGAAGGATCTAT+TGG | + | chr1_2:74240571-74240590 | None:intergenic | 30.0% | |
| GTCTTAATCTTTACCAAAGA+AGG | + | chr1_2:74240580-74240599 | None:intergenic | 30.0% | |
| GTTTATTAACCAATGCTCTT+AGG | + | chr1_2:74240711-74240730 | None:intergenic | 30.0% | |
| AGCATAATAAGCATCTGTAA+TGG | - | chr1_2:74240892-74240911 | Msa0092030:intron | 30.0% | |
| !! | ATGTTCTATCGATTTATGCT+TGG | - | chr1_2:74241010-74241029 | Msa0092030:three_prime_UTR | 30.0% |
| ! | AATGATATTGGTTACGTACA+AGG | - | chr1_2:74241039-74241058 | Msa0092030:intron | 30.0% |
| ! | CTGTTCAGTTTGATAACATT+AGG | - | chr1_2:74241299-74241318 | Msa0092030:intron | 30.0% |
| ! | ATTTTTCCTCCTATCAAACA+AGG | + | chr1_2:74241395-74241414 | None:intergenic | 30.0% |
| TAAACAAGCTTTACATACCA+AGG | + | chr1_2:74241780-74241799 | None:intergenic | 30.0% | |
| ATGCATGAGTAATAGTTTCA+TGG | - | chr1_2:74241813-74241832 | Msa0092030:CDS | 30.0% | |
| AAAAAAAAACTTCAACCACG+TGG | + | chr1_2:74241883-74241902 | None:intergenic | 30.0% | |
| ACTAGTTAAAGTGACACTAA+TGG | - | chr1_2:74241919-74241938 | Msa0092030:intron | 30.0% | |
| ! | TCATTTTACAACCGTTTCTT+AGG | - | chr1_2:74241942-74241961 | Msa0092030:intron | 30.0% |
| AGTTGAAAACTCCTAAGAAA+CGG | + | chr1_2:74241956-74241975 | None:intergenic | 30.0% | |
| !!! | TATCTCTTTTAATTTCGCAG+AGG | - | chr1_2:74242266-74242285 | Msa0092030:intron | 30.0% |
| CTGCAAAAGAAAATTCTCTT+CGG | + | chr1_2:74242344-74242363 | None:intergenic | 30.0% | |
| GTGACAATTTATGTTGTCAA+AGG | + | chr1_2:74242400-74242419 | None:intergenic | 30.0% | |
| !! | TTGTTATTTACTGCAGTTGT+CGG | + | chr1_2:74242595-74242614 | None:intergenic | 30.0% |
| GAGAGAAAAATTGTAAAGAC+AGG | - | chr1_2:74242640-74242659 | Msa0092030:intron | 30.0% | |
| AAACTATCTCTTCAGATCTT+GGG | - | chr1_2:74242856-74242875 | Msa0092030:intron | 30.0% | |
| !!! | TACATGCTTTTTTAGCATCA+AGG | + | chr1_2:74242897-74242916 | None:intergenic | 30.0% |
| ! | GATTTTCTGTAACGATATGA+TGG | - | chr1_2:74243615-74243634 | Msa0092030:intron | 30.0% |
| !! | AAAGATTTAGAATCGACTTG+AGG | + | chr1_2:74243742-74243761 | None:intergenic | 30.0% |
| TAGATATTGCTGAGATTGTT+AGG | - | chr1_2:74243817-74243836 | Msa0092030:intron | 30.0% | |
| AGATATTGCTGAGATTGTTA+GGG | - | chr1_2:74243818-74243837 | Msa0092030:intron | 30.0% | |
| ATCAAGCACATTGCTAATCA+CGG | - | chr1_2:74235864-74235883 | Msa0092030:three_prime_UTR | 35.0% | |
| ! | GATTTGGGATTAAGAAAGAC+AGG | - | chr1_2:74236034-74236053 | Msa0092030:three_prime_UTR | 35.0% |
| ! | GATTTGGGATTAAGAAAGAC+AGG | - | chr1_2:74236034-74236053 | Msa0092030:three_prime_UTR | 35.0% |
| TTAAAGCCGGACATAAAGAA+AGG | - | chr1_2:74236195-74236214 | Msa0092030:intron | 35.0% | |
| !!! | TCTTAGTTTTTTTGGTGGTC+GGG | - | chr1_2:74236231-74236250 | Msa0092030:intron | 35.0% |
| CATAATATATGCAAGGTCTG+GGG | + | chr1_2:74236264-74236283 | None:intergenic | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | + | chr1_2:74236265-74236284 | None:intergenic | 35.0% | |
| TGCATAATATATGCAAGGTC+TGG | + | chr1_2:74236266-74236285 | None:intergenic | 35.0% | |
| ATGGGACAAAAAGTTATGTG+TGG | - | chr1_2:74236555-74236574 | Msa0092030:intron | 35.0% | |
| GATCGTAACACTGTTTATTG+AGG | + | chr1_2:74236592-74236611 | None:intergenic | 35.0% | |
| GCGAGTTTACAAACTACTAT+AGG | + | chr1_2:74236761-74236780 | None:intergenic | 35.0% | |
| ! | GGAAAATTTTGCAGATTGTG+AGG | + | chr1_2:74237696-74237715 | None:intergenic | 35.0% |
| TACCTTTGCGATTTGTGAAA+TGG | + | chr1_2:74237724-74237743 | None:intergenic | 35.0% | |
| TACTTTCTGTTTCCTCAACT+GGG | - | chr1_2:74237742-74237761 | Msa0092030:intron | 35.0% | |
| GTATTCTTCAGAATCTTTGC+AGG | - | chr1_2:74237764-74237783 | Msa0092030:intron | 35.0% | |
| AAACACTGTTGGAATTGAAG+AGG | - | chr1_2:74237919-74237938 | Msa0092030:intron | 35.0% | |
| ! | CTTGGTTTAAATCGAGTTGT+TGG | + | chr1_2:74238059-74238078 | None:intergenic | 35.0% |
| CAACAACTCGATTTAAACCA+AGG | - | chr1_2:74238057-74238076 | Msa0092030:intron | 35.0% | |
| AAAAACAAAAGCTTCACCCT+TGG | + | chr1_2:74238077-74238096 | None:intergenic | 35.0% | |
| ! | TCCCGGACATATTTCAATTT+TGG | - | chr1_2:74238183-74238202 | Msa0092030:intron | 35.0% |
| TCTCCAATTGTGAACTTCAT+TGG | - | chr1_2:74238457-74238476 | Msa0092030:intron | 35.0% | |
| ! | GAAATATGAAGTGTCATAGC+AGG | + | chr1_2:74238509-74238528 | None:intergenic | 35.0% |
| TATACATTATTTCCGCAGTC+TGG | - | chr1_2:74238685-74238704 | Msa0092030:three_prime_UTR | 35.0% | |
| AGACTTTAAGTGCAAGAAGA+TGG | - | chr1_2:74238710-74238729 | Msa0092030:three_prime_UTR | 35.0% | |
| ATCGTTTATCATTGCATTGC+TGG | - | chr1_2:74238823-74238842 | Msa0092030:intron | 35.0% | |
| AAAACACACAGCACATCAAA+TGG | + | chr1_2:74239025-74239044 | None:intergenic | 35.0% | |
| CAAACAGTACATCTGAAGAA+CGG | - | chr1_2:74239293-74239312 | Msa0092030:intron | 35.0% | |
| TGATTAGGACAAAAAGGCAA+TGG | + | chr1_2:74239472-74239491 | None:intergenic | 35.0% | |
| CCACAATGATTAGGACAAAA+AGG | + | chr1_2:74239478-74239497 | None:intergenic | 35.0% | |
| ! | CCTTTTTGTCCTAATCATTG+TGG | - | chr1_2:74239475-74239494 | Msa0092030:intron | 35.0% |
| CATAAACTTGATAGGAAGCA+TGG | + | chr1_2:74239591-74239610 | None:intergenic | 35.0% | |
| CTTCCTATCAAGTTTATGCT+TGG | - | chr1_2:74239593-74239612 | Msa0092030:intron | 35.0% | |
| TAATTGGGCTAAGGGATTAT+GGG | + | chr1_2:74239807-74239826 | None:intergenic | 35.0% | |
| TTAATTGGGCTAAGGGATTA+TGG | + | chr1_2:74239808-74239827 | None:intergenic | 35.0% | |
| AGAAACTAATCCGATTTCGA+AGG | - | chr1_2:74240085-74240104 | Msa0092030:intron | 35.0% | |
| GAAACTAATCCGATTTCGAA+GGG | - | chr1_2:74240086-74240105 | Msa0092030:intron | 35.0% | |
| ! | GAAGGGATTTTGTATAGTTC+AGG | - | chr1_2:74240103-74240122 | Msa0092030:intron | 35.0% |
| !!! | TGGGTTTTTAGGATTCTGAT+CGG | - | chr1_2:74240175-74240194 | Msa0092030:intron | 35.0% |
| GATCGGGAATTTAACAACAA+CGG | - | chr1_2:74240192-74240211 | Msa0092030:intron | 35.0% | |
| ! | TTTTTCTAATAGGCATCTGG+TGG | - | chr1_2:74240336-74240355 | Msa0092030:intron | 35.0% |
| ! | TTTTCTAATAGGCATCTGGT+GGG | - | chr1_2:74240337-74240356 | Msa0092030:intron | 35.0% |
| !!! | TCTGGTGGGACAAATTTTTT+AGG | - | chr1_2:74240351-74240370 | Msa0092030:intron | 35.0% |
| !!! | CTGGTGGGACAAATTTTTTA+GGG | - | chr1_2:74240352-74240371 | Msa0092030:intron | 35.0% |
| TAACAAATTTCCCACTACCA+AGG | + | chr1_2:74240519-74240538 | None:intergenic | 35.0% | |
| CTGCAGTTATTACATCAGAT+TGG | - | chr1_2:74240625-74240644 | Msa0092030:intron | 35.0% | |
| TCGGTTAAGGATTCCATAAA+AGG | + | chr1_2:74240815-74240834 | None:intergenic | 35.0% | |
| TTTGTTAACGAGTGCCTTAA+GGG | + | chr1_2:74240840-74240859 | None:intergenic | 35.0% | |
| ! | TTTTGTTAACGAGTGCCTTA+AGG | + | chr1_2:74240841-74240860 | None:intergenic | 35.0% |
| TTTCATAAAAGGCAAGTGCT+CGG | + | chr1_2:74240963-74240982 | None:intergenic | 35.0% | |
| !! | TCTATCGATTTATGCTTGGT+TGG | - | chr1_2:74241014-74241033 | Msa0092030:three_prime_UTR | 35.0% |
| GAATGATATTTGCTCACCTT+TGG | - | chr1_2:74241154-74241173 | Msa0092030:intron | 35.0% | |
| ! | AGAATGAAGCAGATTGCTTT+TGG | - | chr1_2:74241189-74241208 | Msa0092030:intron | 35.0% |
| CAAAGTGGCATGCTAATTAA+AGG | + | chr1_2:74241442-74241461 | None:intergenic | 35.0% | |
| !! | GCTTTAAAGGGAAAACAAAG+TGG | + | chr1_2:74241457-74241476 | None:intergenic | 35.0% |
| !! | GGTCTATTTGGTTTGAGAAA+AGG | + | chr1_2:74241613-74241632 | None:intergenic | 35.0% |
| GTAAAAACAACGGGTCTATT+TGG | + | chr1_2:74241625-74241644 | None:intergenic | 35.0% | |
| TGAAGTTCTCTCTCTGTTAT+GGG | + | chr1_2:74241669-74241688 | None:intergenic | 35.0% | |
| ATAACAGAGAGAGAACTTCA+GGG | - | chr1_2:74241669-74241688 | Msa0092030:three_prime_UTR | 35.0% | |
| AGTTGACATTGTAACCTCAA+GGG | + | chr1_2:74241983-74242002 | None:intergenic | 35.0% | |
| TAGTTTCCGTAAACTTCCAT+GGG | + | chr1_2:74242026-74242045 | None:intergenic | 35.0% | |
| AGTTGTTGTCTGTAGTTGTT+TGG | - | chr1_2:74242134-74242153 | Msa0092030:intron | 35.0% | |
| GTTGTTGTCTGTAGTTGTTT+GGG | - | chr1_2:74242135-74242154 | Msa0092030:intron | 35.0% | |
| TTGTTGTCTGTAGTTGTTTG+GGG | - | chr1_2:74242136-74242155 | Msa0092030:intron | 35.0% | |
| AGGTAATGTCTCCCAATTAA+GGG | + | chr1_2:74242168-74242187 | None:intergenic | 35.0% | |
| ! | ACCTTGTTTCAAATCTGTCT+CGG | - | chr1_2:74242191-74242210 | Msa0092030:intron | 35.0% |
| AATTTCGCAGAGGATTTAGA+TGG | - | chr1_2:74242276-74242295 | Msa0092030:intron | 35.0% | |
| TTGCAGACACTTTGTATCTT+TGG | - | chr1_2:74242358-74242377 | Msa0092030:intron | 35.0% | |
| TGCAGACACTTTGTATCTTT+GGG | - | chr1_2:74242359-74242378 | Msa0092030:intron | 35.0% | |
| ! | TAGATTGTTTCCAGTTGATG+TGG | - | chr1_2:74242503-74242522 | Msa0092030:intron | 35.0% |
| ! | AGATTGTTTCCAGTTGATGT+GGG | - | chr1_2:74242504-74242523 | Msa0092030:intron | 35.0% |
| CGTACTTAGCAAAGATGTTT+GGG | + | chr1_2:74242543-74242562 | None:intergenic | 35.0% | |
| TCGTACTTAGCAAAGATGTT+TGG | + | chr1_2:74242544-74242563 | None:intergenic | 35.0% | |
| AAACATCTTTGCTAAGTACG+AGG | - | chr1_2:74242543-74242562 | Msa0092030:intron | 35.0% | |
| ! | TGTTATTTACTGCAGTTGTC+GGG | + | chr1_2:74242594-74242613 | None:intergenic | 35.0% |
| AACAAAGTTCTGCAGCAATA+TGG | - | chr1_2:74242610-74242629 | Msa0092030:intron | 35.0% | |
| TTCTTGAGACCAAGAATAAG+CGG | - | chr1_2:74242710-74242729 | Msa0092030:intron | 35.0% | |
| GGTTAAAATCCGCTTATTCT+TGG | + | chr1_2:74242722-74242741 | None:intergenic | 35.0% | |
| GAAACTATCTCTTCAGATCT+TGG | - | chr1_2:74242855-74242874 | Msa0092030:intron | 35.0% | |
| !!! | TTTTTTAGCATCAAGGCTTG+AGG | + | chr1_2:74242890-74242909 | None:intergenic | 35.0% |
| TCAGGAAAAATACCTGAACA+AGG | - | chr1_2:74242933-74242952 | Msa0092030:intron | 35.0% | |
| GGAATGAAATTACCTTGTTC+AGG | + | chr1_2:74242948-74242967 | None:intergenic | 35.0% | |
| CAATCAAACTGACACCAAAA+AGG | + | chr1_2:74242992-74243011 | None:intergenic | 35.0% | |
| !!! | CTTTTTGGTGTCAGTTTGAT+TGG | - | chr1_2:74242990-74243009 | Msa0092030:intron | 35.0% |
| AATCTAATGTTGTTCGGTCA+TGG | + | chr1_2:74243599-74243618 | None:intergenic | 35.0% | |
| AAAGAAAATAATGGCCAGTC+AGG | + | chr1_2:74243681-74243700 | None:intergenic | 35.0% | |
| GATATTGCTGAGATTGTTAG+GGG | - | chr1_2:74243819-74243838 | Msa0092030:intron | 35.0% | |
| ATATTGCTGAGATTGTTAGG+GGG | - | chr1_2:74243820-74243839 | Msa0092030:intron | 35.0% | |
| GATTAGCAATGTGCTTGATG+AGG | + | chr1_2:74235863-74235882 | None:intergenic | 40.0% | |
| ACATTGCTAATCACGGTGAA+GGG | - | chr1_2:74235871-74235890 | Msa0092030:three_prime_UTR | 40.0% | |
| TGAAGGGAGATGGAATTTCT+TGG | - | chr1_2:74235887-74235906 | Msa0092030:three_prime_UTR | 40.0% | |
| AATTTCTTGGCTACGAGTTC+AGG | - | chr1_2:74235900-74235919 | Msa0092030:three_prime_UTR | 40.0% | |
| ! | GACGATCTAGAGCAATTCAT+GGG | + | chr1_2:74237159-74237178 | None:intergenic | 40.0% |
| ! | AGACGATCTAGAGCAATTCA+TGG | + | chr1_2:74237160-74237179 | None:intergenic | 40.0% |
| ATTGTGAGGAAGAGAGAGAA+GGG | + | chr1_2:74237682-74237701 | None:intergenic | 40.0% | |
| GCGATTTGTGAAATGGTGAA+TGG | + | chr1_2:74237717-74237736 | None:intergenic | 40.0% | |
| CACCATTTCACAAATCGCAA+AGG | - | chr1_2:74237719-74237738 | Msa0092030:intron | 40.0% | |
| GTACTTTCTGTTTCCTCAAC+TGG | - | chr1_2:74237741-74237760 | Msa0092030:intron | 40.0% | |
| ! | TTCTGAAGAATACCCAGTTG+AGG | + | chr1_2:74237757-74237776 | None:intergenic | 40.0% |
| TGTGCAGAAAATGATCGTGA+TGG | - | chr1_2:74237881-74237900 | Msa0092030:intron | 40.0% | |
| ACTGTTGGAATTGAAGAGGT+TGG | - | chr1_2:74237923-74237942 | Msa0092030:intron | 40.0% | |
| !! | AGGTTGGAGTAGTTGATGAT+TGG | - | chr1_2:74237939-74237958 | Msa0092030:intron | 40.0% |
| !! | GAGTAGTTGATGATTGGTTG+TGG | - | chr1_2:74237945-74237964 | Msa0092030:intron | 40.0% |
| !! | TAGTTGATGATTGGTTGTGG+TGG | - | chr1_2:74237948-74237967 | Msa0092030:intron | 40.0% |
| AGTGTTCTTATGATGCGTTC+TGG | - | chr1_2:74237978-74237997 | Msa0092030:three_prime_UTR | 40.0% | |
| !! | ACCCTCTAAGGTGAATAAGT+GGG | - | chr1_2:74238144-74238163 | Msa0092030:intron | 40.0% |
| TCCCACTTATTCACCTTAGA+GGG | + | chr1_2:74238148-74238167 | None:intergenic | 40.0% | |
| TTCCCACTTATTCACCTTAG+AGG | + | chr1_2:74238149-74238168 | None:intergenic | 40.0% | |
| AACCAGCCATTTGACAACAT+TGG | - | chr1_2:74238425-74238444 | Msa0092030:intron | 40.0% | |
| TCACAGCCAATGTTGTCAAA+TGG | + | chr1_2:74238434-74238453 | None:intergenic | 40.0% | |
| CCTCCAATGAAGTTCACAAT+TGG | + | chr1_2:74238463-74238482 | None:intergenic | 40.0% | |
| CCAATTGTGAACTTCATTGG+AGG | - | chr1_2:74238460-74238479 | Msa0092030:intron | 40.0% | |
| ! | TATATACTTGAGCGAGTTGG+TGG | - | chr1_2:74238606-74238625 | Msa0092030:intron | 40.0% |
| GTCTGATGCAAATGGAAGTT+GGG | + | chr1_2:74238957-74238976 | None:intergenic | 40.0% | |
| TGTCTGATGCAAATGGAAGT+TGG | + | chr1_2:74238958-74238977 | None:intergenic | 40.0% | |
| CAGCATAAGCACAAATCAGA+AGG | + | chr1_2:74239191-74239210 | None:intergenic | 40.0% | |
| GTGTCCATCCTTCAATCAAA+GGG | - | chr1_2:74239236-74239255 | Msa0092030:three_prime_UTR | 40.0% | |
| TGTCCATCCTTCAATCAAAG+GGG | - | chr1_2:74239237-74239256 | Msa0092030:three_prime_UTR | 40.0% | |
| ! | TTCAATCAAAGGGGAGGTAT+GGG | - | chr1_2:74239246-74239265 | Msa0092030:three_prime_UTR | 40.0% |
| CGTTCTTCAGATGTACTGTT+TGG | + | chr1_2:74239295-74239314 | None:intergenic | 40.0% | |
| GCACCAAGCATAAACTTGAT+AGG | + | chr1_2:74239599-74239618 | None:intergenic | 40.0% | |
| !! | GCTTGGTGCTTCATAGTATA+TGG | - | chr1_2:74239610-74239629 | Msa0092030:intron | 40.0% |
| GAGAATGGGAACAACAATGT+AGG | - | chr1_2:74239697-74239716 | Msa0092030:intron | 40.0% | |
| ACACAGGGTTTCAGATAAAG+AGG | - | chr1_2:74239858-74239877 | Msa0092030:intron | 40.0% | |
| CACAGGGTTTCAGATAAAGA+GGG | - | chr1_2:74239859-74239878 | Msa0092030:intron | 40.0% | |
| ATTCTACTCACGATCCAGAT+CGG | - | chr1_2:74240126-74240145 | Msa0092030:intron | 40.0% | |
| AGAGCAAAATCGCAAAATCG+TGG | - | chr1_2:74240155-74240174 | Msa0092030:intron | 40.0% | |
| GAGCAAAATCGCAAAATCGT+GGG | - | chr1_2:74240156-74240175 | Msa0092030:intron | 40.0% | |
| ! | TCGCAAAATCGTGGGTTTTT+AGG | - | chr1_2:74240164-74240183 | Msa0092030:intron | 40.0% |
| !!! | GGGTTTTTAGGATTCTGATC+GGG | - | chr1_2:74240176-74240195 | Msa0092030:intron | 40.0% |
| CAGATAAGAAAGTTGTGCAG+TGG | - | chr1_2:74240602-74240621 | Msa0092030:intron | 40.0% | |
| !! | TTTTTAGGAGAACGCCAATG+AGG | - | chr1_2:74240683-74240702 | Msa0092030:intron | 40.0% |
| !! | TTTTAGGAGAACGCCAATGA+GGG | - | chr1_2:74240684-74240703 | Msa0092030:intron | 40.0% |
| GCTTGGTTGGACAATGATAT+TGG | - | chr1_2:74241027-74241046 | Msa0092030:intron | 40.0% | |
| GTTTAATCTCCATTTGAGGG+AGG | - | chr1_2:74241369-74241388 | Msa0092030:intron | 40.0% | |
| CTGAAGTTCTCTCTCTGTTA+TGG | + | chr1_2:74241670-74241689 | None:intergenic | 40.0% | |
| CATAACAGAGAGAGAACTTC+AGG | - | chr1_2:74241668-74241687 | Msa0092030:three_prime_UTR | 40.0% | |
| ! | CCAAGGTGATGATGAAGTTT+GGG | + | chr1_2:74241763-74241782 | None:intergenic | 40.0% |
| ! | ACCAAGGTGATGATGAAGTT+TGG | + | chr1_2:74241764-74241783 | None:intergenic | 40.0% |
| ! | TGGAAGCATATGACTCTGAT+TGG | + | chr1_2:74241863-74241882 | None:intergenic | 40.0% |
| GAGTTGACATTGTAACCTCA+AGG | + | chr1_2:74241984-74242003 | None:intergenic | 40.0% | |
| AGTTTCCGTAAACTTCCATG+GGG | + | chr1_2:74242025-74242044 | None:intergenic | 40.0% | |
| GTAGTTTCCGTAAACTTCCA+TGG | + | chr1_2:74242027-74242046 | None:intergenic | 40.0% | |
| CAGGTAATGTCTCCCAATTA+AGG | + | chr1_2:74242169-74242188 | None:intergenic | 40.0% | |
| ! | CAGATTTGAAACAAGGTCTC+AGG | + | chr1_2:74242188-74242207 | None:intergenic | 40.0% |
| AGACACTTTGTATCTTTGGG+AGG | - | chr1_2:74242362-74242381 | Msa0092030:intron | 40.0% | |
| ! | CTTTGTATCTTTGGGAGGTA+AGG | - | chr1_2:74242367-74242386 | Msa0092030:intron | 40.0% |
| ! | GATTGTTTCCAGTTGATGTG+GGG | - | chr1_2:74242505-74242524 | Msa0092030:intron | 40.0% |
| !!! | GCTTTTGTTTTAGCACCATC+TGG | + | chr1_2:74242571-74242590 | None:intergenic | 40.0% |
| GTTATTTACTGCAGTTGTCG+GGG | + | chr1_2:74242593-74242612 | None:intergenic | 40.0% | |
| ! | GTGCACTATTTTCTTCTGTG+CGG | + | chr1_2:74242666-74242685 | None:intergenic | 40.0% |
| CACAGAAGAAAATAGTGCAC+TGG | - | chr1_2:74242666-74242685 | Msa0092030:intron | 40.0% | |
| !! | GAATAAGCGGATTTTAACCG+AGG | - | chr1_2:74242723-74242742 | Msa0092030:intron | 40.0% |
| TAAGGGATGGAAAGAAAGAG+AGG | + | chr1_2:74242777-74242796 | None:intergenic | 40.0% | |
| GCACATGTATAAGTAAGGGA+TGG | + | chr1_2:74242790-74242809 | None:intergenic | 40.0% | |
| !! | AGGTGATAAATGCTGCTTTC+AGG | + | chr1_2:74243925-74243944 | None:intergenic | 40.0% |
| ATGAGCTTAGAAGGAGACCT+TGG | - | chr1_2:74235817-74235836 | Msa0092030:three_prime_UTR | 45.0% | |
| TCATCCTCTTCAAGAGTCCA+AGG | + | chr1_2:74235837-74235856 | None:intergenic | 45.0% | |
| CACATTGCTAATCACGGTGA+AGG | - | chr1_2:74235870-74235889 | Msa0092030:three_prime_UTR | 45.0% | |
| GATTGTGAGGAAGAGAGAGA+AGG | + | chr1_2:74237683-74237702 | None:intergenic | 45.0% | |
| CTTTGCATTCTGGTCGAATG+GGG | + | chr1_2:74238028-74238047 | None:intergenic | 45.0% | |
| GCTTTGCATTCTGGTCGAAT+GGG | + | chr1_2:74238029-74238048 | None:intergenic | 45.0% | |
| AGCTTTGCATTCTGGTCGAA+TGG | + | chr1_2:74238030-74238049 | None:intergenic | 45.0% | |
| GGAACATCAGCTTTGCATTC+TGG | + | chr1_2:74238038-74238057 | None:intergenic | 45.0% | |
| AGCCAAAGTTTCACCCTCTA+AGG | - | chr1_2:74238132-74238151 | Msa0092030:intron | 45.0% | |
| CACCTTAGAGGGTGAAACTT+TGG | + | chr1_2:74238137-74238156 | None:intergenic | 45.0% | |
| !! | CACCCTCTAAGGTGAATAAG+TGG | - | chr1_2:74238143-74238162 | Msa0092030:intron | 45.0% |
| GGTGAATAAGTGGGAATTCC+AGG | - | chr1_2:74238153-74238172 | Msa0092030:intron | 45.0% | |
| GAATTCCAGGATTCGAATCC+CGG | - | chr1_2:74238166-74238185 | Msa0092030:intron | 45.0% | |
| AGCCAATGTTGTCAAATGGC+TGG | + | chr1_2:74238430-74238449 | None:intergenic | 45.0% | |
| CTTAAAGTCTTGCCAGACTG+CGG | + | chr1_2:74238700-74238719 | None:intergenic | 45.0% | |
| !! | TTCTGAGACGAATACAGCGA+GGG | - | chr1_2:74238776-74238795 | Msa0092030:three_prime_UTR | 45.0% |
| GGTGTCCATCCTTCAATCAA+AGG | - | chr1_2:74239235-74239254 | Msa0092030:three_prime_UTR | 45.0% | |
| CATACCTCCCCTTTGATTGA+AGG | + | chr1_2:74239247-74239266 | None:intergenic | 45.0% | |
| CTTCAATCAAAGGGGAGGTA+TGG | - | chr1_2:74239245-74239264 | Msa0092030:three_prime_UTR | 45.0% | |
| GAGGTATGGGAGTTCTTACT+AGG | - | chr1_2:74239259-74239278 | Msa0092030:intron | 45.0% | |
| AAAAAGGCAATGGCAACAGC+AGG | + | chr1_2:74239462-74239481 | None:intergenic | 45.0% | |
| CAATGGTGCAGTAGTAGCAA+TGG | + | chr1_2:74239532-74239551 | None:intergenic | 45.0% | |
| TGGGAACAACAATGTAGGCT+AGG | - | chr1_2:74239702-74239721 | Msa0092030:intron | 45.0% | |
| GGGAACAACAATGTAGGCTA+GGG | - | chr1_2:74239703-74239722 | Msa0092030:intron | 45.0% | |
| CAAAAGATAGTCCCAGTCCT+TGG | - | chr1_2:74240499-74240518 | Msa0092030:intron | 45.0% | |
| ATTTCCCACTACCAAGGACT+GGG | + | chr1_2:74240513-74240532 | None:intergenic | 45.0% | |
| AATTTCCCACTACCAAGGAC+TGG | + | chr1_2:74240514-74240533 | None:intergenic | 45.0% | |
| TTTGTTACAACACCCCTCGT+CGG | - | chr1_2:74240532-74240551 | Msa0092030:intron | 45.0% | |
| CCAAAGAAGGATCTATTGGC+TGG | + | chr1_2:74240567-74240586 | None:intergenic | 45.0% | |
| CCAGCCAATAGATCCTTCTT+TGG | - | chr1_2:74240564-74240583 | Msa0092030:intron | 45.0% | |
| ATCCTTAACCGATGCCCTTA+AGG | - | chr1_2:74240823-74240842 | Msa0092030:intron | 45.0% | |
| CTCTCTCTGTTATGGGACAT+AGG | + | chr1_2:74241662-74241681 | None:intergenic | 45.0% | |
| CCCAAACTTCATCATCACCT+TGG | - | chr1_2:74241760-74241779 | Msa0092030:exon | 45.0% | |
| GACATTGTAACCTCAAGGGA+CGG | + | chr1_2:74241979-74241998 | None:intergenic | 45.0% | |
| GATACCCCCATGGAAGTTTA+CGG | - | chr1_2:74242017-74242036 | Msa0092030:intron | 45.0% | |
| GTTTCCGTAAACTTCCATGG+GGG | + | chr1_2:74242024-74242043 | None:intergenic | 45.0% | |
| ATGTCTCCCAATTAAGGGAG+AGG | + | chr1_2:74242163-74242182 | None:intergenic | 45.0% | |
| ! | GCCGAGACAGATTTGAAACA+AGG | + | chr1_2:74242195-74242214 | None:intergenic | 45.0% |
| TTCGCAGAGGATTTAGATGG+TGG | - | chr1_2:74242279-74242298 | Msa0092030:intron | 45.0% | |
| TAACGATATGATGGCAGCTG+TGG | - | chr1_2:74243624-74243643 | Msa0092030:intron | 45.0% | |
| !!! | GATTTTAAATAAAATAATAA+GGG | + | chr1_2:74237035-74237054 | None:intergenic | 5.0% |
| !!! | TGATTTTAAATAAAATAATA+AGG | + | chr1_2:74237036-74237055 | None:intergenic | 5.0% |
| !! | AAAATAAAGATAAAAAAAAA+AGG | + | chr1_2:74240400-74240419 | None:intergenic | 5.0% |
| GAGACCTTGGACTCTTGAAG+AGG | - | chr1_2:74235830-74235849 | Msa0092030:three_prime_UTR | 50.0% | |
| CTAATCACGGTGAAGGGAGA+TGG | - | chr1_2:74235877-74235896 | Msa0092030:three_prime_UTR | 50.0% | |
| TATGTCCGGGATTCGAATCC+TGG | + | chr1_2:74238174-74238193 | None:intergenic | 50.0% | |
| !! | GTTCTGAGACGAATACAGCG+AGG | - | chr1_2:74238775-74238794 | Msa0092030:three_prime_UTR | 50.0% |
| ! | TCTGAGACGAATACAGCGAG+GGG | - | chr1_2:74238777-74238796 | Msa0092030:three_prime_UTR | 50.0% |
| CCTCCCCTTTGATTGAAGGA+TGG | + | chr1_2:74239243-74239262 | None:intergenic | 50.0% | |
| CCATCCTTCAATCAAAGGGG+AGG | - | chr1_2:74239240-74239259 | Msa0092030:three_prime_UTR | 50.0% | |
| ACTCACGATCCAGATCGGTA+AGG | - | chr1_2:74240131-74240150 | Msa0092030:intron | 50.0% | |
| TTTGCTCTGCCTTACCGATC+TGG | + | chr1_2:74240143-74240162 | None:intergenic | 50.0% | |
| ATAGTCCCAGTCCTTGGTAG+TGG | - | chr1_2:74240505-74240524 | Msa0092030:intron | 50.0% | |
| ! | TAGTCCCAGTCCTTGGTAGT+GGG | - | chr1_2:74240506-74240525 | Msa0092030:intron | 50.0% |
| AATGCTCTTAGGGCCCTCAT+TGG | + | chr1_2:74240700-74240719 | None:intergenic | 50.0% | |
| ! | AATGAGGGCCCTAAGAGCAT+TGG | - | chr1_2:74240699-74240718 | Msa0092030:intron | 50.0% |
| !! | TGCCTTAAGGGCATCGGTTA+AGG | + | chr1_2:74240828-74240847 | None:intergenic | 50.0% |
| ! | AACGAGTGCCTTAAGGGCAT+CGG | + | chr1_2:74240834-74240853 | None:intergenic | 50.0% |
| CAAACAAGGCCTCCCTCAAA+TGG | + | chr1_2:74241381-74241400 | None:intergenic | 50.0% | |
| !! | TGAGGGAGGCCTTGTTTGAT+AGG | - | chr1_2:74241383-74241402 | Msa0092030:intron | 50.0% |
| CTCTGTTATGGGACATAGGC+AGG | + | chr1_2:74241658-74241677 | None:intergenic | 50.0% | |
| GAGAGAGAACTTCAGGGTCA+CGG | - | chr1_2:74241675-74241694 | Msa0092030:three_prime_UTR | 50.0% | |
| AGGGTCACGGCAACTTCAAT+GGG | - | chr1_2:74241688-74241707 | Msa0092030:three_prime_UTR | 50.0% | |
| ! | AATGGGGGTGCAAACTCAGT+TGG | - | chr1_2:74241705-74241724 | Msa0092030:three_prime_UTR | 50.0% |
| ! | ATGGGGGTGCAAACTCAGTT+GGG | - | chr1_2:74241706-74241725 | Msa0092030:three_prime_UTR | 50.0% |
| CAGAGTCATATGCTTCCACG+TGG | - | chr1_2:74241865-74241884 | Msa0092030:intron | 50.0% | |
| ! | GTTTTCAACTCCGTCCCTTG+AGG | - | chr1_2:74241966-74241985 | Msa0092030:intron | 50.0% |
| TTGGGGACCTCTCCCTTAAT+TGG | - | chr1_2:74242153-74242172 | Msa0092030:intron | 50.0% | |
| TGGGGACCTCTCCCTTAATT+GGG | - | chr1_2:74242154-74242173 | Msa0092030:intron | 50.0% | |
| CTTTGCGTTTCGCATGCTGA+TGG | - | chr1_2:74242311-74242330 | Msa0092030:intron | 50.0% | |
| ! | TTTCCAGTTGATGTGGGGCA+TGG | - | chr1_2:74242510-74242529 | Msa0092030:intron | 50.0% |
| ATTCCATGCCCCACATCAAC+TGG | + | chr1_2:74242516-74242535 | None:intergenic | 50.0% | |
| GCTAAGTACGAGGATCCAGA+TGG | - | chr1_2:74242553-74242572 | Msa0092030:intron | 50.0% | |
| !! | CGGATTTTAACCGAGGCCAA+GGG | - | chr1_2:74242730-74242749 | Msa0092030:intron | 50.0% |
| GACAACATCATCCACACCCT+TGG | + | chr1_2:74242749-74242768 | None:intergenic | 50.0% | |
| GGGTGTGGATGATGTTGTCA+AGG | - | chr1_2:74242750-74242769 | Msa0092030:intron | 50.0% | |
| GGAATGAGCTCAAGCAACGC+CGG | - | chr1_2:74239314-74239333 | Msa0092030:intron | 55.0% | |
| ! | AGGAAGCATGGCCATCCAAG+AGG | + | chr1_2:74239579-74239598 | None:intergenic | 55.0% |
| CCACATATCATACTGCCCCC+TGG | + | chr1_2:74240467-74240486 | None:intergenic | 55.0% | |
| CCAGGGGGCAGTATGATATG+TGG | - | chr1_2:74240464-74240483 | Msa0092030:three_prime_UTR | 55.0% | |
| CTACCATCCTTCGCATCGCA+CGG | + | chr1_2:74241223-74241242 | None:intergenic | 55.0% | |
| !! | GGGAGGCCTTGTTTGATAGG+AGG | - | chr1_2:74241386-74241405 | Msa0092030:intron | 55.0% |
| CAGGGTCACGGCAACTTCAA+TGG | - | chr1_2:74241687-74241706 | Msa0092030:three_prime_UTR | 55.0% | |
| GGGTCACGGCAACTTCAATG+GGG | - | chr1_2:74241689-74241708 | Msa0092030:three_prime_UTR | 55.0% | |
| GGTCACGGCAACTTCAATGG+GGG | - | chr1_2:74241690-74241709 | Msa0092030:three_prime_UTR | 55.0% | |
| TCGCTAAGCTGATACCCCCA+TGG | - | chr1_2:74242007-74242026 | Msa0092030:intron | 55.0% | |
| !! | GCGGATTTTAACCGAGGCCA+AGG | - | chr1_2:74242729-74242748 | Msa0092030:intron | 55.0% |
| TTTAACCGAGGCCAAGGGTG+TGG | - | chr1_2:74242735-74242754 | Msa0092030:intron | 55.0% | |
| ATCATCCACACCCTTGGCCT+CGG | + | chr1_2:74242743-74242762 | None:intergenic | 55.0% | |
| GTCAGGAGCAACTGAAGCCT+GGG | + | chr1_2:74243664-74243683 | None:intergenic | 55.0% | |
| AGTCAGGAGCAACTGAAGCC+TGG | + | chr1_2:74243665-74243684 | None:intergenic | 55.0% | |
| AGGCTTCAGTTGCTCCTGAC+TGG | - | chr1_2:74243664-74243683 | Msa0092030:intron | 55.0% | |
| ATGAGCTCAAGCAACGCCGG+AGG | - | chr1_2:74239317-74239336 | Msa0092030:intron | 60.0% | |
| ACACCCCTCGTCGGTGATGA+TGG | - | chr1_2:74240541-74240560 | Msa0092030:intron | 60.0% | |
| TGGCCATCATCACCGACGAG+GGG | + | chr1_2:74240547-74240566 | None:intergenic | 60.0% | |
| CTGGCCATCATCACCGACGA+GGG | + | chr1_2:74240548-74240567 | None:intergenic | 60.0% | |
| GCTTTGACCGTGCGATGCGA+AGG | - | chr1_2:74241213-74241232 | Msa0092030:intron | 60.0% | |
| TGACCGTGCGATGCGAAGGA+TGG | - | chr1_2:74241217-74241236 | Msa0092030:intron | 60.0% | |
| CGTGCGATGCGAAGGATGGT+AGG | - | chr1_2:74241221-74241240 | Msa0092030:intron | 60.0% | |
| TGGTTGCGCGTGATCTTCCC+AGG | - | chr1_2:74243644-74243663 | Msa0092030:intron | 60.0% | |
| GCTGGCCATCATCACCGACG+AGG | + | chr1_2:74240549-74240568 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 74235795 | 74243948 | 74235795 | ID=Msa0092030;Name=Msa0092030 |
| chr1_2 | mRNA | 74235795 | 74243948 | 74235795 | ID=Msa0092030-mRNA-1;Parent=Msa0092030;Name=Msa0092030-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.90|0.91|0.91|0.81|0.83|12|1607|72 |
| chr1_2 | exon | 74235795 | 74236156 | 74235795 | ID=Msa0092030-mRNA-1:exon:26197;Parent=Msa0092030-mRNA-1 |
| chr1_2 | exon | 74236789 | 74236872 | 74236789 | ID=Msa0092030-mRNA-1:exon:26196;Parent=Msa0092030-mRNA-1 |
| chr1_2 | exon | 74236972 | 74237237 | 74236972 | ID=Msa0092030-mRNA-1:exon:26195;Parent=Msa0092030-mRNA-1 |
| chr1_2 | exon | 74237360 | 74237457 | 74237360 | ID=Msa0092030-mRNA-1:exon:26194;Parent=Msa0092030-mRNA-1 |
| chr1_2 | exon | 74237962 | 74238067 | 74237962 | ID=Msa0092030-mRNA-1:exon:26193;Parent=Msa0092030-mRNA-1 |
| chr1_2 | exon | 74238505 | 74238593 | 74238505 | ID=Msa0092030-mRNA-1:exon:26192;Parent=Msa0092030-mRNA-1 |
| chr1_2 | exon | 74238683 | 74238805 | 74238683 | ID=Msa0092030-mRNA-1:exon:26191;Parent=Msa0092030-mRNA-1 |
| chr1_2 | exon | 74239097 | 74239275 | 74239097 | ID=Msa0092030-mRNA-1:exon:26190;Parent=Msa0092030-mRNA-1 |
| chr1_2 | exon | 74240405 | 74240508 | 74240405 | ID=Msa0092030-mRNA-1:exon:26189;Parent=Msa0092030-mRNA-1 |
| chr1_2 | exon | 74240945 | 74241040 | 74240945 | ID=Msa0092030-mRNA-1:exon:26188;Parent=Msa0092030-mRNA-1 |
| chr1_2 | exon | 74241664 | 74241855 | 74241664 | ID=Msa0092030-mRNA-1:exon:26187;Parent=Msa0092030-mRNA-1 |
| chr1_2 | exon | 74243822 | 74243948 | 74243822 | ID=Msa0092030-mRNA-1:exon:26186;Parent=Msa0092030-mRNA-1 |
| chr1_2 | CDS | 74243822 | 74243948 | 74243822 | ID=Msa0092030-mRNA-1:cds;Parent=Msa0092030-mRNA-1 |
| chr1_2 | CDS | 74241764 | 74241855 | 74241764 | ID=Msa0092030-mRNA-1:cds;Parent=Msa0092030-mRNA-1 |
| chr1_2 | three_prime_UTR | 74241664 | 74241763 | 74241664 | ID=Msa0092030-mRNA-1:three_prime_utr;Parent=Msa0092030-mRNA-1 |
| chr1_2 | three_prime_UTR | 74240945 | 74241040 | 74240945 | ID=Msa0092030-mRNA-1:three_prime_utr;Parent=Msa0092030-mRNA-1 |
| chr1_2 | three_prime_UTR | 74240405 | 74240508 | 74240405 | ID=Msa0092030-mRNA-1:three_prime_utr;Parent=Msa0092030-mRNA-1 |
| chr1_2 | three_prime_UTR | 74239097 | 74239275 | 74239097 | ID=Msa0092030-mRNA-1:three_prime_utr;Parent=Msa0092030-mRNA-1 |
| chr1_2 | three_prime_UTR | 74238683 | 74238805 | 74238683 | ID=Msa0092030-mRNA-1:three_prime_utr;Parent=Msa0092030-mRNA-1 |
| chr1_2 | three_prime_UTR | 74238505 | 74238593 | 74238505 | ID=Msa0092030-mRNA-1:three_prime_utr;Parent=Msa0092030-mRNA-1 |
| chr1_2 | three_prime_UTR | 74237962 | 74238067 | 74237962 | ID=Msa0092030-mRNA-1:three_prime_utr;Parent=Msa0092030-mRNA-1 |
| chr1_2 | three_prime_UTR | 74237360 | 74237457 | 74237360 | ID=Msa0092030-mRNA-1:three_prime_utr;Parent=Msa0092030-mRNA-1 |
| chr1_2 | three_prime_UTR | 74236972 | 74237237 | 74236972 | ID=Msa0092030-mRNA-1:three_prime_utr;Parent=Msa0092030-mRNA-1 |
| chr1_2 | three_prime_UTR | 74236789 | 74236872 | 74236789 | ID=Msa0092030-mRNA-1:three_prime_utr;Parent=Msa0092030-mRNA-1 |
| chr1_2 | three_prime_UTR | 74235795 | 74236156 | 74235795 | ID=Msa0092030-mRNA-1:three_prime_utr;Parent=Msa0092030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
