Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092120 | QSD99540.1 | 83.333 | 48 | 8 | 0 | 1 | 48 | 14 | 61 | 2.33e-17 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092120 | A0A896WBP0 | 83.333 | 48 | 8 | 0 | 1 | 48 | 14 | 61 | 1.11e-17 | 83.6 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0092120 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0092030 | Msa0092120 | 0.984263 | 4.694771e-160 | -8.615850e-47 |
| Msa0092120 | Msa0165250 | 0.811830 | 5.754527e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092120 | MtrunA17_Chr1g0209661 | 68.889 | 45 | 14 | 0 | 4 | 48 | 21 | 65 | 1.21e-13 | 63.5 |
| Msa0092120 | MtrunA17_Chr2g0293911 | 58.333 | 48 | 20 | 0 | 1 | 48 | 15 | 62 | 6.17e-11 | 55.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 134 sgRNAs with CRISPR-Local
Find 470 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAATAAAACTGATGTTTC+TGG | 0.157585 | 1_2:+74403636 | None:intergenic |
| ATTAGCTTCAATTTCATAAA+AGG | 0.203724 | 1_2:+74406463 | None:intergenic |
| TTGCAGACACTTTGTATCTT+TGG | 0.207166 | 1_2:-74405076 | Msa0092120:three_prime_UTR |
| AGGTGATAAATGCTGCTTTC+AGG | 0.246271 | 1_2:+74403512 | None:intergenic |
| TGCAGACACTTTGTATCTTT+GGG | 0.250970 | 1_2:-74405075 | Msa0092120:three_prime_UTR |
| TAGATATTGCTGAGATTGTT+AGG | 0.256929 | 1_2:-74403617 | Msa0092120:three_prime_UTR |
| GGAACATCAGCTTTGCATTC+TGG | 0.283596 | 1_2:+74409397 | None:intergenic |
| GGTTAAAATCCGCTTATTCT+TGG | 0.310024 | 1_2:+74404715 | None:intergenic |
| ACCAAGGTGATGATGAAGTT+TGG | 0.323604 | 1_2:+74405673 | None:intergenic |
| CGTTCTTCAGATGTACTGTT+TGG | 0.329382 | 1_2:+74408142 | None:intergenic |
| AAGCTAATCAATCAAAACTT+TGG | 0.335623 | 1_2:-74406448 | Msa0092120:three_prime_UTR |
| TTTACCAAAGAAGGATCTAT+TGG | 0.337174 | 1_2:+74406866 | None:intergenic |
| AATTTCTTGGCTACGAGTTC+AGG | 0.341882 | 1_2:-74411532 | Msa0092120:intron |
| TGTTATTTACTGCAGTTGTC+GGG | 0.344456 | 1_2:+74404843 | None:intergenic |
| AAGATGATAATGAGCTTAGA+AGG | 0.344977 | 1_2:-74411624 | Msa0092120:CDS |
| TCGTACTTAGCAAAGATGTT+TGG | 0.347971 | 1_2:+74404893 | None:intergenic |
| TAAAGAAGCATTGAAAATTC+AGG | 0.354516 | 1_2:-74404519 | Msa0092120:three_prime_UTR |
| CATAACAGAGAGAGAACTTC+AGG | 0.356856 | 1_2:-74405766 | Msa0092120:intron |
| GGAATGAAATTACCTTGTTC+AGG | 0.359907 | 1_2:+74404489 | None:intergenic |
| GCTTGGTTGGACAATGATAT+TGG | 0.362000 | 1_2:-74406407 | Msa0092120:three_prime_UTR |
| AGCTAATCAATCAAAACTTT+GGG | 0.364180 | 1_2:-74406447 | Msa0092120:three_prime_UTR |
| CCAGCCAATAGATCCTTCTT+TGG | 0.364262 | 1_2:-74406870 | Msa0092120:three_prime_UTR |
| CATACCTCCCCTTTGATTGA+AGG | 0.365247 | 1_2:+74408190 | None:intergenic |
| GAATGATATTTGCTCACCTT+TGG | 0.371946 | 1_2:-74406280 | Msa0092120:three_prime_UTR |
| CGTACTTAGCAAAGATGTTT+GGG | 0.372522 | 1_2:+74404894 | None:intergenic |
| AACAAAGTTCTGCAGCAATA+TGG | 0.373710 | 1_2:-74404824 | Msa0092120:three_prime_UTR |
| AGGGTCACGGCAACTTCAAT+GGG | 0.375879 | 1_2:-74405746 | Msa0092120:three_prime_UTR |
| CCAAGGTGATGATGAAGTTT+GGG | 0.382258 | 1_2:+74405674 | None:intergenic |
| TTGTTATTTACTGCAGTTGT+CGG | 0.385817 | 1_2:+74404842 | None:intergenic |
| AGAATGAAGCAGATTGCTTT+TGG | 0.392479 | 1_2:-74406245 | Msa0092120:three_prime_UTR |
| AGGCTTCAGTTGCTCCTGAC+TGG | 0.393517 | 1_2:-74403770 | Msa0092120:three_prime_UTR |
| TGAAGGGAGATGGAATTTCT+TGG | 0.396627 | 1_2:-74411545 | Msa0092120:CDS |
| AATTGAAATAAAGAAAATAA+TGG | 0.398363 | 1_2:+74403747 | None:intergenic |
| AGTGTTCTTATGATGCGTTC+TGG | 0.398602 | 1_2:-74409454 | Msa0092120:three_prime_UTR |
| ATTCCATGCCCCACATCAAC+TGG | 0.401936 | 1_2:+74404921 | None:intergenic |
| CAGGGTCACGGCAACTTCAA+TGG | 0.403253 | 1_2:-74405747 | Msa0092120:three_prime_UTR |
| AATTTCGCAGAGGATTTAGA+TGG | 0.409934 | 1_2:-74405158 | Msa0092120:intron |
| GTCTTAATCTTTACCAAAGA+AGG | 0.418418 | 1_2:+74406857 | None:intergenic |
| AAAGAAAATAATGGCCAGTC+AGG | 0.422485 | 1_2:+74403756 | None:intergenic |
| AGATATTGCTGAGATTGTTA+GGG | 0.423861 | 1_2:-74403616 | Msa0092120:three_prime_UTR |
| AATCTTTGAATTCTTCAATA+CGG | 0.430454 | 1_2:-74403679 | Msa0092120:three_prime_UTR |
| TGGTTGCGCGTGATCTTCCC+AGG | 0.443101 | 1_2:-74403790 | Msa0092120:three_prime_UTR |
| AGTCAGGAGCAACTGAAGCC+TGG | 0.445837 | 1_2:+74403772 | None:intergenic |
| ATTTAATGAAGAAGGTCGTT+TGG | 0.446674 | 1_2:-74408691 | Msa0092120:three_prime_UTR |
| GCTTTGCATTCTGGTCGAAT+GGG | 0.450111 | 1_2:+74409406 | None:intergenic |
| AGCTTTGCATTCTGGTCGAA+TGG | 0.451360 | 1_2:+74409405 | None:intergenic |
| CTTCAATCAAAGGGGAGGTA+TGG | 0.455332 | 1_2:-74408189 | Msa0092120:three_prime_UTR |
| GTGTCCATCCTTCAATCAAA+GGG | 0.456060 | 1_2:-74408198 | Msa0092120:three_prime_UTR |
| AAACTATCTCTTCAGATCTT+GGG | 0.457129 | 1_2:-74404578 | Msa0092120:intron |
| CTTGGTTTAAATCGAGTTGT+TGG | 0.459273 | 1_2:+74409376 | None:intergenic |
| CTTTGCGTTTCGCATGCTGA+TGG | 0.461102 | 1_2:-74405123 | Msa0092120:three_prime_UTR |
| AGGTTGGAGTAGTTGATGAT+TGG | 0.461139 | 1_2:-74409493 | Msa0092120:CDS |
| AATCTAATGTTGTTCGGTCA+TGG | 0.464150 | 1_2:+74403838 | None:intergenic |
| CTGCAAAAGAAAATTCTCTT+CGG | 0.465835 | 1_2:+74405093 | None:intergenic |
| ACAGAAAATCTAATGTTGTT+CGG | 0.475229 | 1_2:+74403832 | None:intergenic |
| TTTAACCGAGGCCAAGGGTG+TGG | 0.488018 | 1_2:-74404699 | Msa0092120:three_prime_UTR |
| ACACCCCTCGTCGGTGATGA+TGG | 0.491285 | 1_2:-74406893 | Msa0092120:three_prime_UTR |
| AATTCAGCATTTAATGAAGA+AGG | 0.491910 | 1_2:-74408699 | Msa0092120:three_prime_UTR |
| GACAACATCATCCACACCCT+TGG | 0.493741 | 1_2:+74404688 | None:intergenic |
| CTAATCACGGTGAAGGGAGA+TGG | 0.494762 | 1_2:-74411555 | Msa0092120:CDS |
| CTGCAGTTATTACATCAGAT+TGG | 0.495324 | 1_2:-74406809 | Msa0092120:intron |
| ACTTTCATAAGTTGTAACAT+AGG | 0.496779 | 1_2:-74403549 | Msa0092120:three_prime_UTR |
| AGACTTTAAGTGCAAGAAGA+TGG | 0.503037 | 1_2:-74408722 | Msa0092120:three_prime_UTR |
| TTCAATCAAAGGGGAGGTAT+GGG | 0.503151 | 1_2:-74408188 | Msa0092120:three_prime_UTR |
| GAGTAGTTGATGATTGGTTG+TGG | 0.504825 | 1_2:-74409487 | Msa0092120:CDS |
| GTCAGGAGCAACTGAAGCCT+GGG | 0.508230 | 1_2:+74403773 | None:intergenic |
| GAGGTATGGGAGTTCTTACT+AGG | 0.509597 | 1_2:-74408175 | Msa0092120:three_prime_UTR |
| TCTATCGATTTATGCTTGGT+TGG | 0.517744 | 1_2:-74406420 | Msa0092120:three_prime_UTR |
| CCAAAGAAGGATCTATTGGC+TGG | 0.519514 | 1_2:+74406870 | None:intergenic |
| TAGATTGTTTCCAGTTGATG+TGG | 0.522281 | 1_2:-74404931 | Msa0092120:three_prime_UTR |
| ATCATCCACACCCTTGGCCT+CGG | 0.523840 | 1_2:+74404694 | None:intergenic |
| TAGTTGATGATTGGTTGTGG+TGG | 0.526635 | 1_2:-74409484 | Msa0092120:CDS |
| TTTCCAGTTGATGTGGGGCA+TGG | 0.528620 | 1_2:-74404924 | Msa0092120:three_prime_UTR |
| ATGAGCTTAGAAGGAGACCT+TGG | 0.529929 | 1_2:-74411615 | Msa0092120:CDS |
| ATGTTCTATCGATTTATGCT+TGG | 0.530760 | 1_2:-74406424 | Msa0092120:three_prime_UTR |
| CAAAAGATAGTCCCAGTCCT+TGG | 0.534490 | 1_2:-74406935 | Msa0092120:three_prime_UTR |
| ACTGTTGGAATTGAAGAGGT+TGG | 0.539877 | 1_2:-74409509 | Msa0092120:CDS |
| ATAGCAAATAGAAACACTGT+TGG | 0.541783 | 1_2:-74409524 | Msa0092120:CDS |
| ATAGTCCCAGTCCTTGGTAG+TGG | 0.544048 | 1_2:-74406929 | Msa0092120:three_prime_UTR |
| TTCGCAGAGGATTTAGATGG+TGG | 0.544888 | 1_2:-74405155 | Msa0092120:intron |
| AATTTCCCACTACCAAGGAC+TGG | 0.551856 | 1_2:+74406923 | None:intergenic |
| GGTGTCCATCCTTCAATCAA+AGG | 0.554064 | 1_2:-74408199 | Msa0092120:three_prime_UTR |
| CACATTGCTAATCACGGTGA+AGG | 0.557400 | 1_2:-74411562 | Msa0092120:CDS |
| AATGATATTGGTTACGTACA+AGG | 0.559481 | 1_2:-74406395 | Msa0092120:intron |
| CACAGAAGAAAATAGTGCAC+TGG | 0.560074 | 1_2:-74404768 | Msa0092120:three_prime_UTR |
| GTTATTTACTGCAGTTGTCG+GGG | 0.562804 | 1_2:+74404844 | None:intergenic |
| TCATCCTCTTCAAGAGTCCA+AGG | 0.566218 | 1_2:+74411598 | None:intergenic |
| AGATTGTTTCCAGTTGATGT+GGG | 0.569904 | 1_2:-74404930 | Msa0092120:three_prime_UTR |
| TTCTTGAGACCAAGAATAAG+CGG | 0.570669 | 1_2:-74404724 | Msa0092120:three_prime_UTR |
| AAAGATTTAGAATCGACTTG+AGG | 0.581927 | 1_2:+74403695 | None:intergenic |
| CTGGCCATCATCACCGACGA+GGG | 0.583759 | 1_2:+74406889 | None:intergenic |
| CCTCCCCTTTGATTGAAGGA+TGG | 0.584741 | 1_2:+74408194 | None:intergenic |
| TGACCGTGCGATGCGAAGGA+TGG | 0.584801 | 1_2:-74406217 | Msa0092120:intron |
| CCCAAACTTCATCATCACCT+TGG | 0.586296 | 1_2:-74405674 | Msa0092120:intron |
| AAACACTGTTGGAATTGAAG+AGG | 0.587307 | 1_2:-74409513 | Msa0092120:CDS |
| GCTTTGACCGTGCGATGCGA+AGG | 0.590644 | 1_2:-74406221 | Msa0092120:three_prime_UTR |
| CAACAACTCGATTTAAACCA+AGG | 0.590717 | 1_2:-74409375 | Msa0092120:three_prime_UTR |
| ACATTGCTAATCACGGTGAA+GGG | 0.599784 | 1_2:-74411561 | Msa0092120:CDS |
| CTTTGCATTCTGGTCGAATG+GGG | 0.600210 | 1_2:+74409407 | None:intergenic |
| GAGAGAGAACTTCAGGGTCA+CGG | 0.600516 | 1_2:-74405759 | Msa0092120:three_prime_UTR |
| ATCAAGCACATTGCTAATCA+CGG | 0.601388 | 1_2:-74411568 | Msa0092120:CDS |
| TAGTCCCAGTCCTTGGTAGT+GGG | 0.603102 | 1_2:-74406928 | Msa0092120:three_prime_UTR |
| TTCTGAGACGAATACAGCGA+GGG | 0.604305 | 1_2:-74408656 | Msa0092120:three_prime_UTR |
| TTTCATAAAAGGCAAGTGCT+CGG | 0.605214 | 1_2:+74406474 | None:intergenic |
| CTACCATCCTTCGCATCGCA+CGG | 0.607222 | 1_2:+74406214 | None:intergenic |
| ATAACAGAGAGAGAACTTCA+GGG | 0.610985 | 1_2:-74405765 | Msa0092120:intron |
| GATTGTTTCCAGTTGATGTG+GGG | 0.616381 | 1_2:-74404929 | Msa0092120:three_prime_UTR |
| AACAACTCGATTTAAACCAA+GGG | 0.617507 | 1_2:-74409374 | Msa0092120:intron |
| GAGACCTTGGACTCTTGAAG+AGG | 0.623367 | 1_2:-74411602 | Msa0092120:CDS |
| TAACAAATTTCCCACTACCA+AGG | 0.624907 | 1_2:+74406918 | None:intergenic |
| AGACACTTTGTATCTTTGGG+AGG | 0.625099 | 1_2:-74405072 | Msa0092120:intron |
| GATATTGCTGAGATTGTTAG+GGG | 0.626948 | 1_2:-74403615 | Msa0092120:three_prime_UTR |
| TGGCCATCATCACCGACGAG+GGG | 0.627189 | 1_2:+74406890 | None:intergenic |
| GGGTGTGGATGATGTTGTCA+AGG | 0.632112 | 1_2:-74404684 | Msa0092120:intron |
| ATTTCCCACTACCAAGGACT+GGG | 0.635175 | 1_2:+74406924 | None:intergenic |
| GCTAAGTACGAGGATCCAGA+TGG | 0.638060 | 1_2:-74404881 | Msa0092120:three_prime_UTR |
| TGTGCAGAAAATGATCGTGA+TGG | 0.639975 | 1_2:-74409551 | Msa0092120:intron |
| CAGATAAGAAAGTTGTGCAG+TGG | 0.644760 | 1_2:-74406832 | Msa0092120:three_prime_UTR |
| GGAATGAGCTCAAGCAACGC+CGG | 0.647980 | 1_2:-74408120 | Msa0092120:three_prime_UTR |
| TAACGATATGATGGCAGCTG+TGG | 0.651752 | 1_2:-74403810 | Msa0092120:three_prime_UTR |
| CAAACAGTACATCTGAAGAA+CGG | 0.654428 | 1_2:-74408141 | Msa0092120:three_prime_UTR |
| TTCTCAATAAGAATAACCAA+AGG | 0.664555 | 1_2:+74406264 | None:intergenic |
| CCATCCTTCAATCAAAGGGG+AGG | 0.665030 | 1_2:-74408194 | Msa0092120:three_prime_UTR |
| GGGTCACGGCAACTTCAATG+GGG | 0.667044 | 1_2:-74405745 | Msa0092120:three_prime_UTR |
| TTTGTTACAACACCCCTCGT+CGG | 0.671778 | 1_2:-74406902 | Msa0092120:three_prime_UTR |
| GCTGGCCATCATCACCGACG+AGG | 0.684089 | 1_2:+74406888 | None:intergenic |
| TCTGAGACGAATACAGCGAG+GGG | 0.696888 | 1_2:-74408655 | Msa0092120:intron |
| ATGAGCTCAAGCAACGCCGG+AGG | 0.701330 | 1_2:-74408117 | Msa0092120:intron |
| GGTCACGGCAACTTCAATGG+GGG | 0.701438 | 1_2:-74405744 | Msa0092120:three_prime_UTR |
| ATATTGCTGAGATTGTTAGG+GGG | 0.709862 | 1_2:-74403614 | Msa0092120:three_prime_UTR |
| GATTAGCAATGTGCTTGATG+AGG | 0.712205 | 1_2:+74411572 | None:intergenic |
| GTTCTGAGACGAATACAGCG+AGG | 0.713018 | 1_2:-74408657 | Msa0092120:three_prime_UTR |
| TGTCCATCCTTCAATCAAAG+GGG | 0.719618 | 1_2:-74408197 | Msa0092120:three_prime_UTR |
| AAACATCTTTGCTAAGTACG+AGG | 0.721179 | 1_2:-74404891 | Msa0092120:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTATAATTTTTTAA+GGG | + | chr1_2:74404174-74404193 | None:intergenic | 0.0% |
| !!! | TATTTATTTATAATTTTTTA+AGG | + | chr1_2:74404175-74404194 | None:intergenic | 0.0% |
| !!! | AATTAAATCTTTTTTGATTT+GGG | - | chr1_2:74403732-74403751 | Msa0092120:three_prime_UTR | 10.0% |
| !!! | ATTTAAAATCTTTTTTGATT+TGG | - | chr1_2:74403799-74403818 | Msa0092120:three_prime_UTR | 10.0% |
| !!! | TTTAAAATCTTTTTTGATTT+GGG | - | chr1_2:74403800-74403819 | Msa0092120:three_prime_UTR | 10.0% |
| !! | ATTACCAAAAATAAAAAATA+GGG | + | chr1_2:74404388-74404407 | None:intergenic | 10.0% |
| !! | TATTACCAAAAATAAAAAAT+AGG | + | chr1_2:74404389-74404408 | None:intergenic | 10.0% |
| !!! | AAAATTGATTTTTTTTTTGT+TGG | - | chr1_2:74405561-74405580 | Msa0092120:intron | 10.0% |
| !!! | AAATTGATTTTTTTTTTGTT+GGG | - | chr1_2:74405562-74405581 | Msa0092120:intron | 10.0% |
| !! | TATATAATAACAATATTTGT+GGG | + | chr1_2:74406303-74406322 | None:intergenic | 10.0% |
| !! | ATATATAATAACAATATTTG+TGG | + | chr1_2:74406304-74406323 | None:intergenic | 10.0% |
| !!! | AAGATAAATTTTAATCAAAA+CGG | + | chr1_2:74406372-74406391 | None:intergenic | 10.0% |
| !!! | AAAACTCAATTATATTTTTT+AGG | - | chr1_2:74408379-74408398 | Msa0092120:intron | 10.0% |
| !! | AAGTAAATTTGTATAAAAAT+GGG | - | chr1_2:74408448-74408467 | Msa0092120:intron | 10.0% |
| !! | TTTAACATTAAAAAATTGAA+AGG | + | chr1_2:74408788-74408807 | None:intergenic | 10.0% |
| !! | AATTGAAATAAAGAAAATAA+TGG | + | chr1_2:74411401-74411420 | None:intergenic | 10.0% |
| !!! | AAAACTTTTATTTATTGTAT+TGG | - | chr1_2:74411555-74411574 | Msa0092120:CDS | 10.0% |
| !!! | GAATTAAATCTTTTTTGATT+TGG | - | chr1_2:74403731-74403750 | Msa0092120:three_prime_UTR | 15.0% |
| !! | AATTTAGCTATATTAATCTA+CGG | + | chr1_2:74403779-74403798 | None:intergenic | 15.0% |
| !! | AATTTAGCTATATTAATCTA+CGG | + | chr1_2:74403779-74403798 | None:intergenic | 15.0% |
| !!! | ATTACATATCTTAGTTTTTT+TGG | - | chr1_2:74403936-74403955 | Msa0092120:intron | 15.0% |
| !!! | TTTTCTTTTATTTTTACTCT+TGG | - | chr1_2:74404604-74404623 | Msa0092120:intron | 15.0% |
| !! | GTATGGTTATATAATATATA+CGG | + | chr1_2:74405168-74405187 | None:intergenic | 15.0% |
| !!! | TATATAAGCTTTTTTCTTAA+CGG | + | chr1_2:74405275-74405294 | None:intergenic | 15.0% |
| !! | TTTCAATTAAATGTTTATGT+AGG | - | chr1_2:74407056-74407075 | Msa0092120:intron | 15.0% |
| !! | ATGATAATAACAAAGAAATA+TGG | - | chr1_2:74407734-74407753 | Msa0092120:intron | 15.0% |
| !! | ATAAAGATAAAAAAAAAAGG+AGG | + | chr1_2:74408108-74408127 | None:intergenic | 15.0% |
| !! | TTAATGTAAATTATTATCCA+GGG | - | chr1_2:74408158-74408177 | Msa0092120:three_prime_UTR | 15.0% |
| !! | GAAGTAAATTTGTATAAAAA+TGG | - | chr1_2:74408447-74408466 | Msa0092120:intron | 15.0% |
| !!! | AAAATTAACAACAGATTTTA+AGG | + | chr1_2:74409036-74409055 | None:intergenic | 15.0% |
| !! | AAATAGAAAACAAAGTAAAA+AGG | - | chr1_2:74409267-74409286 | Msa0092120:intron | 15.0% |
| !!! | TTTTTTATTTTATGCCTTTT+TGG | - | chr1_2:74410686-74410705 | Msa0092120:intron | 15.0% |
| !! | CAAACAAAATTGAAAAATTA+AGG | + | chr1_2:74410937-74410956 | None:intergenic | 15.0% |
| !! | CAAACAAAATTGAAAAATTA+AGG | + | chr1_2:74410937-74410956 | None:intergenic | 15.0% |
| !!! | TCTTAGTTAGTCTTAATTAA+AGG | - | chr1_2:74404036-74404055 | Msa0092120:intron | 20.0% |
| !! | GTAATAACAATAGTCATTAT+AGG | - | chr1_2:74404403-74404422 | Msa0092120:intron | 20.0% |
| !! | TAGGTTATAAACAAATGTAT+TGG | + | chr1_2:74404455-74404474 | None:intergenic | 20.0% |
| !!! | ATAATTTTATAACGAGCTTA+TGG | - | chr1_2:74404507-74404526 | Msa0092120:three_prime_UTR | 20.0% |
| !! | AAATGTGATATTTCATATCT+TGG | + | chr1_2:74404703-74404722 | None:intergenic | 20.0% |
| !! | AAGAATACTTTCAATTTAAG+TGG | - | chr1_2:74404929-74404948 | Msa0092120:three_prime_UTR | 20.0% |
| !! | TCACTTAAAATTAATTAGTG+TGG | - | chr1_2:74405142-74405161 | Msa0092120:three_prime_UTR | 20.0% |
| !!! | TTTTCATCAATATCCTATTT+TGG | + | chr1_2:74405239-74405258 | None:intergenic | 20.0% |
| !!! | TTTGATATAAAAGTGCATTT+GGG | + | chr1_2:74405815-74405834 | None:intergenic | 20.0% |
| !!! | ATTTGATATAAAAGTGCATT+TGG | + | chr1_2:74405816-74405835 | None:intergenic | 20.0% |
| !! | CAATAGCATACTATTTATTA+GGG | + | chr1_2:74405937-74405956 | None:intergenic | 20.0% |
| !!! | TTTTTTAACTCTTTTTTGGT+AGG | - | chr1_2:74406196-74406215 | Msa0092120:intron | 20.0% |
| !! | TTTCTTTCTATACATTATGT+AGG | - | chr1_2:74406924-74406943 | Msa0092120:three_prime_UTR | 20.0% |
| !! | TTCTTTCTATACATTATGTA+GGG | - | chr1_2:74406925-74406944 | Msa0092120:three_prime_UTR | 20.0% |
| !! | TTTAATTGAAAATATACCTC+CGG | + | chr1_2:74407047-74407066 | None:intergenic | 20.0% |
| !!! | AGCCTTTTGTAAAATTAATT+GGG | + | chr1_2:74407533-74407552 | None:intergenic | 20.0% |
| !!! | AAGCCTTTTGTAAAATTAAT+TGG | + | chr1_2:74407534-74407553 | None:intergenic | 20.0% |
| !! | TATAACTTATTATCTAACAC+AGG | - | chr1_2:74407553-74407572 | Msa0092120:intron | 20.0% |
| !! | ATAACTTATTATCTAACACA+GGG | - | chr1_2:74407554-74407573 | Msa0092120:intron | 20.0% |
| !!! | CTTGTCTAGAATAAATATAA+GGG | + | chr1_2:74407681-74407700 | None:intergenic | 20.0% |
| !!! | TCTTGTCTAGAATAAATATA+AGG | + | chr1_2:74407682-74407701 | None:intergenic | 20.0% |
| !! | ATATTATGCTCATATTCTTT+GGG | + | chr1_2:74407986-74408005 | None:intergenic | 20.0% |
| !! | AATATTATGCTCATATTCTT+TGG | + | chr1_2:74407987-74408006 | None:intergenic | 20.0% |
| !! | AAAGAATATGAGCATAATAT+TGG | - | chr1_2:74407986-74408005 | Msa0092120:intron | 20.0% |
| !! | AAGAATATGAGCATAATATT+GGG | - | chr1_2:74407987-74408006 | Msa0092120:intron | 20.0% |
| !!! | CTTTTACTGATTTTTCTAAT+AGG | - | chr1_2:74408037-74408056 | Msa0092120:intron | 20.0% |
| !! | CTTAATGTAAATTATTATCC+AGG | - | chr1_2:74408157-74408176 | Msa0092120:three_prime_UTR | 20.0% |
| !! | TAATGTAAATTATTATCCAG+GGG | - | chr1_2:74408159-74408178 | Msa0092120:three_prime_UTR | 20.0% |
| !! | CCAAACATAATAAAAAAAAC+AGG | + | chr1_2:74408576-74408595 | None:intergenic | 20.0% |
| !!! | CCTGTTTTTTTTATTATGTT+TGG | - | chr1_2:74408573-74408592 | Msa0092120:intron | 20.0% |
| !!! | AATTGATTATTTTGCATTGT+AGG | - | chr1_2:74408627-74408646 | Msa0092120:intron | 20.0% |
| !!! | ATTAGCTTCAATTTCATAAA+AGG | + | chr1_2:74408685-74408704 | None:intergenic | 20.0% |
| !! | GAAATTTCAGATATTCTTAA+TGG | - | chr1_2:74408822-74408841 | Msa0092120:intron | 20.0% |
| !! | GTGAAAAGAATAAAATATTG+TGG | + | chr1_2:74409225-74409244 | None:intergenic | 20.0% |
| !! | AATGTAGAAAGTAAAAACAA+CGG | + | chr1_2:74409346-74409365 | None:intergenic | 20.0% |
| !!! | TGGTTGAAGTTTTTTTTTTA+AGG | - | chr1_2:74409596-74409615 | Msa0092120:intron | 20.0% |
| !!! | GGTTGAAGTTTTTTTTTTAA+GGG | - | chr1_2:74409597-74409616 | Msa0092120:intron | 20.0% |
| !!! | GTTGAAGTTTTTTTTTTAAG+GGG | - | chr1_2:74409598-74409617 | Msa0092120:intron | 20.0% |
| !!! | TTGAAGTTTTTTTTTTAAGG+GGG | - | chr1_2:74409599-74409618 | Msa0092120:intron | 20.0% |
| !! | AAATTAAAAGAGATAAAGGT+TGG | + | chr1_2:74409972-74409991 | None:intergenic | 20.0% |
| !! | CATAAAATAAAAAATTCAGC+AGG | + | chr1_2:74410680-74410699 | None:intergenic | 20.0% |
| !! | AATTCCCAATTTGTAATTAA+AGG | + | chr1_2:74410745-74410764 | None:intergenic | 20.0% |
| !!! | TGTTTTTCATGTATATGTAA+AGG | - | chr1_2:74410782-74410801 | Msa0092120:intron | 20.0% |
| !!! | AAATTTTCACATATCTAGTA+AGG | + | chr1_2:74411255-74411274 | None:intergenic | 20.0% |
| !! | AATCTTTGAATTCTTCAATA+CGG | - | chr1_2:74411466-74411485 | Msa0092120:intron | 20.0% |
| !!! | CAATTACATATCTTTAAAGC+CGG | - | chr1_2:74403895-74403914 | Msa0092120:intron | 25.0% |
| !!! | ACATATCTTAGTTTTTTTGG+TGG | - | chr1_2:74403939-74403958 | Msa0092120:intron | 25.0% |
| ! | AACAATGCATAATATATGCA+AGG | + | chr1_2:74403984-74404003 | None:intergenic | 25.0% |
| !!! | TGTCTTAAGAACACTTTTTA+AGG | + | chr1_2:74404138-74404157 | None:intergenic | 25.0% |
| !!! | AAAAAGTAATGGATGAACAT+AGG | + | chr1_2:74404353-74404372 | None:intergenic | 25.0% |
| !!! | TCCATTACTTTTTAAGTCAA+AGG | - | chr1_2:74404360-74404379 | Msa0092120:intron | 25.0% |
| !!! | GTCATTATAGGCTTTTTTTA+AGG | - | chr1_2:74404415-74404434 | Msa0092120:intron | 25.0% |
| !!! | AATATCCTATTTTGGAAGAA+GGG | + | chr1_2:74405231-74405250 | None:intergenic | 25.0% |
| !!! | CAATTTTTTCTTTGATGACA+GGG | + | chr1_2:74405548-74405567 | None:intergenic | 25.0% |
| !!! | TCAATTTTTTCTTTGATGAC+AGG | + | chr1_2:74405549-74405568 | None:intergenic | 25.0% |
| ! | ATCCAAAATTGAAATATGTC+CGG | + | chr1_2:74405901-74405920 | None:intergenic | 25.0% |
| ! | GCAATAGCATACTATTTATT+AGG | + | chr1_2:74405938-74405957 | None:intergenic | 25.0% |
| ! | TATTGCATGAATTTATGCTA+AGG | - | chr1_2:74405952-74405971 | Msa0092120:intron | 25.0% |
| !!! | GAGGTTTTTTAACTCTTTTT+TGG | - | chr1_2:74406192-74406211 | Msa0092120:intron | 25.0% |
| ! | AATTCAGCATTTAATGAAGA+AGG | - | chr1_2:74406446-74406465 | Msa0092120:three_prime_UTR | 25.0% |
| ! | ATAACTACCGTTTAATTGTA+TGG | - | chr1_2:74406606-74406625 | Msa0092120:intron | 25.0% |
| ! | AGCTATAACATAAGATAAAG+AGG | - | chr1_2:74407085-74407104 | Msa0092120:intron | 25.0% |
| !! | ATGTTTCTGTTCATAGTATA+TGG | - | chr1_2:74407118-74407137 | Msa0092120:intron | 25.0% |
| ! | TTTAGTCTCGTATAATACAA+TGG | + | chr1_2:74407260-74407279 | None:intergenic | 25.0% |
| !! | AGACTAAAAATTTTACCTCT+TGG | - | chr1_2:74407272-74407291 | Msa0092120:intron | 25.0% |
| !! | TAAAAATTTTACCTCTTGGA+TGG | - | chr1_2:74407276-74407295 | Msa0092120:intron | 25.0% |
| ! | TACAAATGCAAAATAGAGAA+TGG | - | chr1_2:74407393-74407412 | Msa0092120:intron | 25.0% |
| ! | ACAAATGCAAAATAGAGAAT+GGG | - | chr1_2:74407394-74407413 | Msa0092120:intron | 25.0% |
| ! | TGTAAAATTAATTGGGCTAA+GGG | + | chr1_2:74407526-74407545 | None:intergenic | 25.0% |
| ! | TTGTAAAATTAATTGGGCTA+AGG | + | chr1_2:74407527-74407546 | None:intergenic | 25.0% |
| !! | AGCCCAATTAATTTTACAAA+AGG | - | chr1_2:74407528-74407547 | Msa0092120:intron | 25.0% |
| ! | AAGACTTTCAATTATGATCA+TGG | - | chr1_2:74407606-74407625 | Msa0092120:intron | 25.0% |
| ! | ATCAGTAAAAGATTATTACG+AGG | + | chr1_2:74408028-74408047 | None:intergenic | 25.0% |
| ! | AAAAAAGGAGGAAAAAACAT+GGG | + | chr1_2:74408096-74408115 | None:intergenic | 25.0% |
| ! | AAAAAAAGGAGGAAAAAACA+TGG | + | chr1_2:74408097-74408116 | None:intergenic | 25.0% |
| ! | AATGTAAATTATTATCCAGG+GGG | - | chr1_2:74408160-74408179 | Msa0092120:three_prime_UTR | 25.0% |
| ! | TTTATTAACCAATGCTCTTA+GGG | + | chr1_2:74408421-74408440 | None:intergenic | 25.0% |
| !! | CAAGACAAATTTTCCTTTTA+TGG | - | chr1_2:74408510-74408529 | Msa0092120:intron | 25.0% |
| ! | AAGCTAATCAATCAAAACTT+TGG | - | chr1_2:74408697-74408716 | Msa0092120:three_prime_UTR | 25.0% |
| ! | AGCTAATCAATCAAAACTTT+GGG | - | chr1_2:74408698-74408717 | Msa0092120:three_prime_UTR | 25.0% |
| !!! | TAATGGATTATTTCATTTGC+AGG | - | chr1_2:74408839-74408858 | Msa0092120:intron | 25.0% |
| ! | TTCTCAATAAGAATAACCAA+AGG | + | chr1_2:74408884-74408903 | None:intergenic | 25.0% |
| ! | AAATGTTTAATCTCCATTTG+AGG | - | chr1_2:74409076-74409095 | Msa0092120:intron | 25.0% |
| ! | AATGTTTAATCTCCATTTGA+GGG | - | chr1_2:74409077-74409096 | Msa0092120:intron | 25.0% |
| !! | CTTCAAAAACATGCTTTAAA+GGG | + | chr1_2:74409180-74409199 | None:intergenic | 25.0% |
| ! | ACTTCAAAAACATGCTTTAA+AGG | + | chr1_2:74409181-74409200 | None:intergenic | 25.0% |
| !!! | ATGTTTTTGAAGTTTTGTGT+AGG | - | chr1_2:74409188-74409207 | Msa0092120:intron | 25.0% |
| ! | AGAATAAAATATTGTGGTTG+TGG | + | chr1_2:74409219-74409238 | None:intergenic | 25.0% |
| ! | TCAGATATTTGCATAAGAAA+CGG | + | chr1_2:74409247-74409266 | None:intergenic | 25.0% |
| ! | TAGAAAACAAAGTAAAAAGG+TGG | - | chr1_2:74409270-74409289 | Msa0092120:intron | 25.0% |
| ! | ATGTAGAAAGTAAAAACAAC+GGG | + | chr1_2:74409345-74409364 | None:intergenic | 25.0% |
| ! | AATCATATATTCATCTTGCA+AGG | - | chr1_2:74409772-74409791 | Msa0092120:intron | 25.0% |
| !!! | TTGCTTTTGATAACAGAAAA+AGG | - | chr1_2:74409795-74409814 | Msa0092120:intron | 25.0% |
| ! | GTATAAATGTAAGTAAGAGT+AGG | - | chr1_2:74409943-74409962 | Msa0092120:intron | 25.0% |
| ! | TGCGAAATTAAAAGAGATAA+AGG | + | chr1_2:74409976-74409995 | None:intergenic | 25.0% |
| !!! | AAATTGTCACTTTTGTTTTG+AGG | - | chr1_2:74410121-74410140 | Msa0092120:intron | 25.0% |
| ! | ATATGCACATGTATAAGTAA+GGG | + | chr1_2:74410505-74410524 | None:intergenic | 25.0% |
| ! | TATATGCACATGTATAAGTA+AGG | + | chr1_2:74410506-74410525 | None:intergenic | 25.0% |
| !!! | TAAAGAAGCATTGAAAATTC+AGG | - | chr1_2:74410626-74410645 | Msa0092120:intron | 25.0% |
| ! | TTTCGCCTTTAATTACAAAT+TGG | - | chr1_2:74410737-74410756 | Msa0092120:intron | 25.0% |
| ! | TTCGCCTTTAATTACAAATT+GGG | - | chr1_2:74410738-74410757 | Msa0092120:intron | 25.0% |
| !! | GTAGAAAAGATTTTCTGTTA+TGG | + | chr1_2:74411066-74411085 | None:intergenic | 25.0% |
| !!! | TTCTGTTTTTGCATAAACAA+AGG | - | chr1_2:74411203-74411222 | Msa0092120:intron | 25.0% |
| ! | ACAGAAAATCTAATGTTGTT+CGG | + | chr1_2:74411316-74411335 | None:intergenic | 25.0% |
| ! | TCTAATAAAACTGATGTTTC+TGG | + | chr1_2:74411512-74411531 | None:intergenic | 25.0% |
| ! | ACTTTCATAAGTTGTAACAT+AGG | - | chr1_2:74411596-74411615 | Msa0092120:CDS | 25.0% |
| ! | AAGATGATAATGAGCTTAGA+AGG | - | chr1_2:74403521-74403540 | Msa0092120:three_prime_UTR | 30.0% |
| !! | AAGTTTGCTAGTGAAAGATA+TGG | - | chr1_2:74403641-74403660 | Msa0092120:three_prime_UTR | 30.0% |
| TTAAAGCCAGACATAAAGAA+AGG | - | chr1_2:74403869-74403888 | Msa0092120:intron | 30.0% | |
| TTGTTTCCTTTCTTTATGTC+TGG | + | chr1_2:74403878-74403897 | None:intergenic | 30.0% | |
| TTGTTTCCTTTCTTTATGTC+CGG | + | chr1_2:74403878-74403897 | None:intergenic | 30.0% | |
| !!! | ATCTTAGTTTTTTTGGTGGT+CGG | - | chr1_2:74403943-74403962 | Msa0092120:intron | 30.0% |
| !! | TACTCTTAGAGAACTTGTTA+TGG | - | chr1_2:74404249-74404268 | Msa0092120:intron | 30.0% |
| !! | ACTCTTAGAGAACTTGTTAT+GGG | - | chr1_2:74404250-74404269 | Msa0092120:intron | 30.0% |
| ATCGTAACACTGTTTATTGA+GGG | + | chr1_2:74404304-74404323 | None:intergenic | 30.0% | |
| ! | GCCTTTGACTTAAAAAGTAA+TGG | + | chr1_2:74404364-74404383 | None:intergenic | 30.0% |
| !!! | GGCACCCTATTTTTTATTTT+TGG | - | chr1_2:74404381-74404400 | Msa0092120:intron | 30.0% |
| CCTATGTTTCGTAAAACTAA+TGG | + | chr1_2:74405081-74405100 | None:intergenic | 30.0% | |
| !!! | CCATTAGTTTTACGAAACAT+AGG | - | chr1_2:74405078-74405097 | Msa0092120:three_prime_UTR | 30.0% |
| TAACCATACATTCACTAAGT+TGG | - | chr1_2:74405179-74405198 | Msa0092120:intron | 30.0% | |
| TTTCCAACTTAGTGAATGTA+TGG | + | chr1_2:74405185-74405204 | None:intergenic | 30.0% | |
| !! | AGTTGGAAACATTTTGTTTG+AGG | - | chr1_2:74405196-74405215 | Msa0092120:intron | 30.0% |
| ATTAACCCTTCTTCCAAAAT+AGG | - | chr1_2:74405223-74405242 | Msa0092120:intron | 30.0% | |
| !! | CAATATCCTATTTTGGAAGA+AGG | + | chr1_2:74405232-74405251 | None:intergenic | 30.0% |
| ! | CAATGATTTGAGATTGTGAT+TGG | + | chr1_2:74405337-74405356 | None:intergenic | 30.0% |
| ! | CAAATCATTGTTCCATTTTG+CGG | - | chr1_2:74405347-74405366 | Msa0092120:intron | 30.0% |
| GAATAGAATAATCCGCAAAA+TGG | + | chr1_2:74405362-74405381 | None:intergenic | 30.0% | |
| TTTGCAGGATCAGATATAAT+CGG | - | chr1_2:74405492-74405511 | Msa0092120:intron | 30.0% | |
| TGACAGGGAAAAAATCAAAA+GGG | + | chr1_2:74405533-74405552 | None:intergenic | 30.0% | |
| ATGACAGGGAAAAAATCAAA+AGG | + | chr1_2:74405534-74405553 | None:intergenic | 30.0% | |
| ATAGCAAATAGAAACACTGT+TGG | - | chr1_2:74405621-74405640 | Msa0092120:intron | 30.0% | |
| AACAACTCGATTTAAACCAA+GGG | - | chr1_2:74405771-74405790 | Msa0092120:intron | 30.0% | |
| TCCAAAATTGAAATATGTCC+GGG | + | chr1_2:74405900-74405919 | None:intergenic | 30.0% | |
| CATCAAATAGCAGTTATAGT+GGG | + | chr1_2:74406054-74406073 | None:intergenic | 30.0% | |
| TCATCAAATAGCAGTTATAG+TGG | + | chr1_2:74406055-74406074 | None:intergenic | 30.0% | |
| ACAACATTAGACTAACAAGT+TGG | + | chr1_2:74406255-74406274 | None:intergenic | 30.0% | |
| TTATATATACTTGAGCGAGT+TGG | - | chr1_2:74406316-74406335 | Msa0092120:intron | 30.0% | |
| ATTTAATGAAGAAGGTCGTT+TGG | - | chr1_2:74406454-74406473 | Msa0092120:three_prime_UTR | 30.0% | |
| ATACAGAAAAACTCACAAAC+AGG | + | chr1_2:74406562-74406581 | None:intergenic | 30.0% | |
| ! | TGAGTTTTTCTGTATGTTTG+TGG | - | chr1_2:74406567-74406586 | Msa0092120:intron | 30.0% |
| ! | GAGTTTTTCTGTATGTTTGT+GGG | - | chr1_2:74406568-74406587 | Msa0092120:intron | 30.0% |
| AGAGTCACCATACAATTAAA+CGG | + | chr1_2:74406616-74406635 | None:intergenic | 30.0% | |
| AGAAAAATGTCTGATGCAAA+TGG | + | chr1_2:74406678-74406697 | None:intergenic | 30.0% | |
| ! | GACATTTTTCTATGTGAAAG+AGG | - | chr1_2:74406687-74406706 | Msa0092120:intron | 30.0% |
| AGGAAATAACCACAATGATT+AGG | + | chr1_2:74407198-74407217 | None:intergenic | 30.0% | |
| ACAATCGCAGAAATAGAAAT+AGG | + | chr1_2:74407218-74407237 | None:intergenic | 30.0% | |
| AATTCTCGTGTTGAAGTTAT+AGG | - | chr1_2:74407360-74407379 | Msa0092120:intron | 30.0% | |
| ATTCTCGTGTTGAAGTTATA+GGG | - | chr1_2:74407361-74407380 | Msa0092120:intron | 30.0% | |
| !!! | CTCTTATTTTGACAAGCTAT+TGG | + | chr1_2:74407452-74407471 | None:intergenic | 30.0% |
| ! | CAATAGCTTGTCAAAATAAG+AGG | - | chr1_2:74407450-74407469 | Msa0092120:intron | 30.0% |
| !!! | ATTTGTTTTGCTACTCAACT+AGG | + | chr1_2:74407713-74407732 | None:intergenic | 30.0% |
| ATACAAAATCCCTTCGAAAT+CGG | + | chr1_2:74407809-74407828 | None:intergenic | 30.0% | |
| AGATTATTACGAGGAAACAT+GGG | + | chr1_2:74408019-74408038 | None:intergenic | 30.0% | |
| AAGATTATTACGAGGAAACA+TGG | + | chr1_2:74408020-74408039 | None:intergenic | 30.0% | |
| ! | TGATTTTTCTAATAGGCATC+TGG | - | chr1_2:74408044-74408063 | Msa0092120:intron | 30.0% |
| TTTACCAAAGAAGGATCTAT+TGG | + | chr1_2:74408282-74408301 | None:intergenic | 30.0% | |
| GTCTTAATCTTTACCAAAGA+AGG | + | chr1_2:74408291-74408310 | None:intergenic | 30.0% | |
| GTTTATTAACCAATGCTCTT+AGG | + | chr1_2:74408422-74408441 | None:intergenic | 30.0% | |
| AGCATAATAAGCATCTGTAA+TGG | - | chr1_2:74408603-74408622 | Msa0092120:intron | 30.0% | |
| !! | ATGTTCTATCGATTTATGCT+TGG | - | chr1_2:74408721-74408740 | Msa0092120:three_prime_UTR | 30.0% |
| ! | AATGATATTGGTTACGTACA+AGG | - | chr1_2:74408750-74408769 | Msa0092120:intron | 30.0% |
| ! | CTGTTCAGTTTGATAACATT+AGG | - | chr1_2:74409010-74409029 | Msa0092120:intron | 30.0% |
| ! | ATTTTTCCTCCTATCAAACA+AGG | + | chr1_2:74409106-74409125 | None:intergenic | 30.0% |
| TAAACAAGCTTTACATACCA+AGG | + | chr1_2:74409491-74409510 | None:intergenic | 30.0% | |
| ATGCATGAGTAATAGTTTCA+TGG | - | chr1_2:74409524-74409543 | Msa0092120:CDS | 30.0% | |
| AAAAAAAAACTTCAACCACG+TGG | + | chr1_2:74409594-74409613 | None:intergenic | 30.0% | |
| ACTAGTTAAAGTGACACTAA+TGG | - | chr1_2:74409630-74409649 | Msa0092120:intron | 30.0% | |
| ! | TCATTTTACAACCGTTTCTT+AGG | - | chr1_2:74409653-74409672 | Msa0092120:intron | 30.0% |
| AGTTGAAAACTCCTAAGAAA+CGG | + | chr1_2:74409667-74409686 | None:intergenic | 30.0% | |
| !!! | TATCTCTTTTAATTTCGCAG+AGG | - | chr1_2:74409977-74409996 | Msa0092120:intron | 30.0% |
| CTGCAAAAGAAAATTCTCTT+CGG | + | chr1_2:74410055-74410074 | None:intergenic | 30.0% | |
| GTGACAATTTATGTTGTCAA+AGG | + | chr1_2:74410111-74410130 | None:intergenic | 30.0% | |
| !! | TTGTTATTTACTGCAGTTGT+CGG | + | chr1_2:74410306-74410325 | None:intergenic | 30.0% |
| GAGAGAAAAATTGTAAAGAC+AGG | - | chr1_2:74410351-74410370 | Msa0092120:intron | 30.0% | |
| AAACTATCTCTTCAGATCTT+GGG | - | chr1_2:74410567-74410586 | Msa0092120:intron | 30.0% | |
| !!! | TACATGCTTTTTTAGCATCA+AGG | + | chr1_2:74410608-74410627 | None:intergenic | 30.0% |
| ! | GATTTTCTGTAACGATATGA+TGG | - | chr1_2:74411326-74411345 | Msa0092120:intron | 30.0% |
| !! | AAAGATTTAGAATCGACTTG+AGG | + | chr1_2:74411453-74411472 | None:intergenic | 30.0% |
| TAGATATTGCTGAGATTGTT+AGG | - | chr1_2:74411528-74411547 | Msa0092120:intron | 30.0% | |
| AGATATTGCTGAGATTGTTA+GGG | - | chr1_2:74411529-74411548 | Msa0092120:intron | 30.0% | |
| ATCAAGCACATTGCTAATCA+CGG | - | chr1_2:74403577-74403596 | Msa0092120:three_prime_UTR | 35.0% | |
| ! | GATTTGGGATTAAGAAAGAC+AGG | - | chr1_2:74403747-74403766 | Msa0092120:three_prime_UTR | 35.0% |
| ! | GATTTGGGATTAAGAAAGAC+AGG | - | chr1_2:74403747-74403766 | Msa0092120:three_prime_UTR | 35.0% |
| TTAAAGCCGGACATAAAGAA+AGG | - | chr1_2:74403908-74403927 | Msa0092120:intron | 35.0% | |
| !!! | TCTTAGTTTTTTTGGTGGTC+GGG | - | chr1_2:74403944-74403963 | Msa0092120:intron | 35.0% |
| CATAATATATGCAAGGTCTG+GGG | + | chr1_2:74403977-74403996 | None:intergenic | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | + | chr1_2:74403978-74403997 | None:intergenic | 35.0% | |
| TGCATAATATATGCAAGGTC+TGG | + | chr1_2:74403979-74403998 | None:intergenic | 35.0% | |
| ATGGGACAAAAAGTTATGTG+TGG | - | chr1_2:74404268-74404287 | Msa0092120:intron | 35.0% | |
| GATCGTAACACTGTTTATTG+AGG | + | chr1_2:74404305-74404324 | None:intergenic | 35.0% | |
| GCGAGTTTACAAACTACTAT+AGG | + | chr1_2:74404474-74404493 | None:intergenic | 35.0% | |
| ! | GGAAAATTTTGCAGATTGTG+AGG | + | chr1_2:74405409-74405428 | None:intergenic | 35.0% |
| TACCTTTGCGATTTGTGAAA+TGG | + | chr1_2:74405437-74405456 | None:intergenic | 35.0% | |
| TACTTTCTGTTTCCTCAACT+GGG | - | chr1_2:74405455-74405474 | Msa0092120:intron | 35.0% | |
| GTATTCTTCAGAATCTTTGC+AGG | - | chr1_2:74405477-74405496 | Msa0092120:intron | 35.0% | |
| AAACACTGTTGGAATTGAAG+AGG | - | chr1_2:74405632-74405651 | Msa0092120:intron | 35.0% | |
| ! | CTTGGTTTAAATCGAGTTGT+TGG | + | chr1_2:74405772-74405791 | None:intergenic | 35.0% |
| CAACAACTCGATTTAAACCA+AGG | - | chr1_2:74405770-74405789 | Msa0092120:intron | 35.0% | |
| AAAAACAAAAGCTTCACCCT+TGG | + | chr1_2:74405790-74405809 | None:intergenic | 35.0% | |
| ! | TCCCGGACATATTTCAATTT+TGG | - | chr1_2:74405896-74405915 | Msa0092120:intron | 35.0% |
| TCTCCAATTGTGAACTTCAT+TGG | - | chr1_2:74406170-74406189 | Msa0092120:intron | 35.0% | |
| ! | GAAATATGAAGTGTCATAGC+AGG | + | chr1_2:74406222-74406241 | None:intergenic | 35.0% |
| TATACATTATTTCCGCAGTC+TGG | - | chr1_2:74406398-74406417 | Msa0092120:three_prime_UTR | 35.0% | |
| AGACTTTAAGTGCAAGAAGA+TGG | - | chr1_2:74406423-74406442 | Msa0092120:three_prime_UTR | 35.0% | |
| ATCGTTTATCATTGCATTGC+TGG | - | chr1_2:74406536-74406555 | Msa0092120:intron | 35.0% | |
| AAAACACACAGCACATCAAA+TGG | + | chr1_2:74406738-74406757 | None:intergenic | 35.0% | |
| CAAACAGTACATCTGAAGAA+CGG | - | chr1_2:74407004-74407023 | Msa0092120:intron | 35.0% | |
| TGATTAGGACAAAAAGGCAA+TGG | + | chr1_2:74407183-74407202 | None:intergenic | 35.0% | |
| CCACAATGATTAGGACAAAA+AGG | + | chr1_2:74407189-74407208 | None:intergenic | 35.0% | |
| ! | CCTTTTTGTCCTAATCATTG+TGG | - | chr1_2:74407186-74407205 | Msa0092120:intron | 35.0% |
| CATAAACTTGATAGGAAGCA+TGG | + | chr1_2:74407302-74407321 | None:intergenic | 35.0% | |
| CTTCCTATCAAGTTTATGCT+TGG | - | chr1_2:74407304-74407323 | Msa0092120:intron | 35.0% | |
| TAATTGGGCTAAGGGATTAT+GGG | + | chr1_2:74407518-74407537 | None:intergenic | 35.0% | |
| TTAATTGGGCTAAGGGATTA+TGG | + | chr1_2:74407519-74407538 | None:intergenic | 35.0% | |
| AGAAACTAATCCGATTTCGA+AGG | - | chr1_2:74407796-74407815 | Msa0092120:intron | 35.0% | |
| GAAACTAATCCGATTTCGAA+GGG | - | chr1_2:74407797-74407816 | Msa0092120:intron | 35.0% | |
| ! | GAAGGGATTTTGTATAGTTC+AGG | - | chr1_2:74407814-74407833 | Msa0092120:intron | 35.0% |
| !!! | TGGGTTTTTAGGATTCTGAT+CGG | - | chr1_2:74407886-74407905 | Msa0092120:intron | 35.0% |
| GATCGGGAATTTAACAACAA+CGG | - | chr1_2:74407903-74407922 | Msa0092120:intron | 35.0% | |
| ! | TTTTTCTAATAGGCATCTGG+TGG | - | chr1_2:74408047-74408066 | Msa0092120:intron | 35.0% |
| ! | TTTTCTAATAGGCATCTGGT+GGG | - | chr1_2:74408048-74408067 | Msa0092120:intron | 35.0% |
| !!! | TCTGGTGGGACAAATTTTTT+AGG | - | chr1_2:74408062-74408081 | Msa0092120:intron | 35.0% |
| !!! | CTGGTGGGACAAATTTTTTA+GGG | - | chr1_2:74408063-74408082 | Msa0092120:intron | 35.0% |
| TAACAAATTTCCCACTACCA+AGG | + | chr1_2:74408230-74408249 | None:intergenic | 35.0% | |
| CTGCAGTTATTACATCAGAT+TGG | - | chr1_2:74408336-74408355 | Msa0092120:intron | 35.0% | |
| TCGGTTAAGGATTCCATAAA+AGG | + | chr1_2:74408526-74408545 | None:intergenic | 35.0% | |
| TTTGTTAACGAGTGCCTTAA+GGG | + | chr1_2:74408551-74408570 | None:intergenic | 35.0% | |
| ! | TTTTGTTAACGAGTGCCTTA+AGG | + | chr1_2:74408552-74408571 | None:intergenic | 35.0% |
| TTTCATAAAAGGCAAGTGCT+CGG | + | chr1_2:74408674-74408693 | None:intergenic | 35.0% | |
| !! | TCTATCGATTTATGCTTGGT+TGG | - | chr1_2:74408725-74408744 | Msa0092120:three_prime_UTR | 35.0% |
| GAATGATATTTGCTCACCTT+TGG | - | chr1_2:74408865-74408884 | Msa0092120:intron | 35.0% | |
| ! | AGAATGAAGCAGATTGCTTT+TGG | - | chr1_2:74408900-74408919 | Msa0092120:intron | 35.0% |
| CAAAGTGGCATGCTAATTAA+AGG | + | chr1_2:74409153-74409172 | None:intergenic | 35.0% | |
| !! | GCTTTAAAGGGAAAACAAAG+TGG | + | chr1_2:74409168-74409187 | None:intergenic | 35.0% |
| !! | GGTCTATTTGGTTTGAGAAA+AGG | + | chr1_2:74409324-74409343 | None:intergenic | 35.0% |
| GTAAAAACAACGGGTCTATT+TGG | + | chr1_2:74409336-74409355 | None:intergenic | 35.0% | |
| TGAAGTTCTCTCTCTGTTAT+GGG | + | chr1_2:74409380-74409399 | None:intergenic | 35.0% | |
| ATAACAGAGAGAGAACTTCA+GGG | - | chr1_2:74409380-74409399 | Msa0092120:three_prime_UTR | 35.0% | |
| AGTTGACATTGTAACCTCAA+GGG | + | chr1_2:74409694-74409713 | None:intergenic | 35.0% | |
| TAGTTTCCGTAAACTTCCAT+GGG | + | chr1_2:74409737-74409756 | None:intergenic | 35.0% | |
| AGTTGTTGTCTGTAGTTGTT+TGG | - | chr1_2:74409845-74409864 | Msa0092120:intron | 35.0% | |
| GTTGTTGTCTGTAGTTGTTT+GGG | - | chr1_2:74409846-74409865 | Msa0092120:intron | 35.0% | |
| TTGTTGTCTGTAGTTGTTTG+GGG | - | chr1_2:74409847-74409866 | Msa0092120:intron | 35.0% | |
| AGGTAATGTCTCCCAATTAA+GGG | + | chr1_2:74409879-74409898 | None:intergenic | 35.0% | |
| ! | ACCTTGTTTCAAATCTGTCT+CGG | - | chr1_2:74409902-74409921 | Msa0092120:intron | 35.0% |
| AATTTCGCAGAGGATTTAGA+TGG | - | chr1_2:74409987-74410006 | Msa0092120:intron | 35.0% | |
| TTGCAGACACTTTGTATCTT+TGG | - | chr1_2:74410069-74410088 | Msa0092120:intron | 35.0% | |
| TGCAGACACTTTGTATCTTT+GGG | - | chr1_2:74410070-74410089 | Msa0092120:intron | 35.0% | |
| ! | TAGATTGTTTCCAGTTGATG+TGG | - | chr1_2:74410214-74410233 | Msa0092120:intron | 35.0% |
| ! | AGATTGTTTCCAGTTGATGT+GGG | - | chr1_2:74410215-74410234 | Msa0092120:intron | 35.0% |
| CGTACTTAGCAAAGATGTTT+GGG | + | chr1_2:74410254-74410273 | None:intergenic | 35.0% | |
| TCGTACTTAGCAAAGATGTT+TGG | + | chr1_2:74410255-74410274 | None:intergenic | 35.0% | |
| AAACATCTTTGCTAAGTACG+AGG | - | chr1_2:74410254-74410273 | Msa0092120:intron | 35.0% | |
| ! | TGTTATTTACTGCAGTTGTC+GGG | + | chr1_2:74410305-74410324 | None:intergenic | 35.0% |
| AACAAAGTTCTGCAGCAATA+TGG | - | chr1_2:74410321-74410340 | Msa0092120:intron | 35.0% | |
| TTCTTGAGACCAAGAATAAG+CGG | - | chr1_2:74410421-74410440 | Msa0092120:intron | 35.0% | |
| GGTTAAAATCCGCTTATTCT+TGG | + | chr1_2:74410433-74410452 | None:intergenic | 35.0% | |
| GAAACTATCTCTTCAGATCT+TGG | - | chr1_2:74410566-74410585 | Msa0092120:intron | 35.0% | |
| !!! | TTTTTTAGCATCAAGGCTTG+AGG | + | chr1_2:74410601-74410620 | None:intergenic | 35.0% |
| TCAGGAAAAATACCTGAACA+AGG | - | chr1_2:74410644-74410663 | Msa0092120:intron | 35.0% | |
| GGAATGAAATTACCTTGTTC+AGG | + | chr1_2:74410659-74410678 | None:intergenic | 35.0% | |
| CAATCAAACTGACACCAAAA+AGG | + | chr1_2:74410703-74410722 | None:intergenic | 35.0% | |
| !!! | CTTTTTGGTGTCAGTTTGAT+TGG | - | chr1_2:74410701-74410720 | Msa0092120:intron | 35.0% |
| AATCTAATGTTGTTCGGTCA+TGG | + | chr1_2:74411310-74411329 | None:intergenic | 35.0% | |
| AAAGAAAATAATGGCCAGTC+AGG | + | chr1_2:74411392-74411411 | None:intergenic | 35.0% | |
| GATATTGCTGAGATTGTTAG+GGG | - | chr1_2:74411530-74411549 | Msa0092120:intron | 35.0% | |
| ATATTGCTGAGATTGTTAGG+GGG | - | chr1_2:74411531-74411550 | Msa0092120:intron | 35.0% | |
| GATTAGCAATGTGCTTGATG+AGG | + | chr1_2:74403576-74403595 | None:intergenic | 40.0% | |
| ACATTGCTAATCACGGTGAA+GGG | - | chr1_2:74403584-74403603 | Msa0092120:three_prime_UTR | 40.0% | |
| TGAAGGGAGATGGAATTTCT+TGG | - | chr1_2:74403600-74403619 | Msa0092120:three_prime_UTR | 40.0% | |
| AATTTCTTGGCTACGAGTTC+AGG | - | chr1_2:74403613-74403632 | Msa0092120:three_prime_UTR | 40.0% | |
| ! | GACGATCTAGAGCAATTCAT+GGG | + | chr1_2:74404872-74404891 | None:intergenic | 40.0% |
| ! | AGACGATCTAGAGCAATTCA+TGG | + | chr1_2:74404873-74404892 | None:intergenic | 40.0% |
| ATTGTGAGGAAGAGAGAGAA+GGG | + | chr1_2:74405395-74405414 | None:intergenic | 40.0% | |
| GCGATTTGTGAAATGGTGAA+TGG | + | chr1_2:74405430-74405449 | None:intergenic | 40.0% | |
| CACCATTTCACAAATCGCAA+AGG | - | chr1_2:74405432-74405451 | Msa0092120:intron | 40.0% | |
| GTACTTTCTGTTTCCTCAAC+TGG | - | chr1_2:74405454-74405473 | Msa0092120:intron | 40.0% | |
| ! | TTCTGAAGAATACCCAGTTG+AGG | + | chr1_2:74405470-74405489 | None:intergenic | 40.0% |
| TGTGCAGAAAATGATCGTGA+TGG | - | chr1_2:74405594-74405613 | Msa0092120:intron | 40.0% | |
| ACTGTTGGAATTGAAGAGGT+TGG | - | chr1_2:74405636-74405655 | Msa0092120:intron | 40.0% | |
| !! | AGGTTGGAGTAGTTGATGAT+TGG | - | chr1_2:74405652-74405671 | Msa0092120:intron | 40.0% |
| !! | GAGTAGTTGATGATTGGTTG+TGG | - | chr1_2:74405658-74405677 | Msa0092120:intron | 40.0% |
| !! | TAGTTGATGATTGGTTGTGG+TGG | - | chr1_2:74405661-74405680 | Msa0092120:intron | 40.0% |
| AGTGTTCTTATGATGCGTTC+TGG | - | chr1_2:74405691-74405710 | Msa0092120:three_prime_UTR | 40.0% | |
| !! | ACCCTCTAAGGTGAATAAGT+GGG | - | chr1_2:74405857-74405876 | Msa0092120:intron | 40.0% |
| TCCCACTTATTCACCTTAGA+GGG | + | chr1_2:74405861-74405880 | None:intergenic | 40.0% | |
| TTCCCACTTATTCACCTTAG+AGG | + | chr1_2:74405862-74405881 | None:intergenic | 40.0% | |
| AACCAGCCATTTGACAACAT+TGG | - | chr1_2:74406138-74406157 | Msa0092120:intron | 40.0% | |
| TCACAGCCAATGTTGTCAAA+TGG | + | chr1_2:74406147-74406166 | None:intergenic | 40.0% | |
| CCTCCAATGAAGTTCACAAT+TGG | + | chr1_2:74406176-74406195 | None:intergenic | 40.0% | |
| CCAATTGTGAACTTCATTGG+AGG | - | chr1_2:74406173-74406192 | Msa0092120:intron | 40.0% | |
| ! | TATATACTTGAGCGAGTTGG+TGG | - | chr1_2:74406319-74406338 | Msa0092120:intron | 40.0% |
| GTCTGATGCAAATGGAAGTT+GGG | + | chr1_2:74406670-74406689 | None:intergenic | 40.0% | |
| TGTCTGATGCAAATGGAAGT+TGG | + | chr1_2:74406671-74406690 | None:intergenic | 40.0% | |
| CAGCATAAGCACAAATCAGA+AGG | + | chr1_2:74406902-74406921 | None:intergenic | 40.0% | |
| GTGTCCATCCTTCAATCAAA+GGG | - | chr1_2:74406947-74406966 | Msa0092120:three_prime_UTR | 40.0% | |
| TGTCCATCCTTCAATCAAAG+GGG | - | chr1_2:74406948-74406967 | Msa0092120:three_prime_UTR | 40.0% | |
| ! | TTCAATCAAAGGGGAGGTAT+GGG | - | chr1_2:74406957-74406976 | Msa0092120:three_prime_UTR | 40.0% |
| CGTTCTTCAGATGTACTGTT+TGG | + | chr1_2:74407006-74407025 | None:intergenic | 40.0% | |
| GCACCAAGCATAAACTTGAT+AGG | + | chr1_2:74407310-74407329 | None:intergenic | 40.0% | |
| !! | GCTTGGTGCTTCATAGTATA+TGG | - | chr1_2:74407321-74407340 | Msa0092120:intron | 40.0% |
| GAGAATGGGAACAACAATGT+AGG | - | chr1_2:74407408-74407427 | Msa0092120:intron | 40.0% | |
| ACACAGGGTTTCAGATAAAG+AGG | - | chr1_2:74407569-74407588 | Msa0092120:intron | 40.0% | |
| CACAGGGTTTCAGATAAAGA+GGG | - | chr1_2:74407570-74407589 | Msa0092120:intron | 40.0% | |
| ATTCTACTCACGATCCAGAT+CGG | - | chr1_2:74407837-74407856 | Msa0092120:intron | 40.0% | |
| AGAGCAAAATCGCAAAATCG+TGG | - | chr1_2:74407866-74407885 | Msa0092120:intron | 40.0% | |
| GAGCAAAATCGCAAAATCGT+GGG | - | chr1_2:74407867-74407886 | Msa0092120:intron | 40.0% | |
| ! | TCGCAAAATCGTGGGTTTTT+AGG | - | chr1_2:74407875-74407894 | Msa0092120:intron | 40.0% |
| !!! | GGGTTTTTAGGATTCTGATC+GGG | - | chr1_2:74407887-74407906 | Msa0092120:intron | 40.0% |
| CAGATAAGAAAGTTGTGCAG+TGG | - | chr1_2:74408313-74408332 | Msa0092120:intron | 40.0% | |
| !! | TTTTTAGGAGAACGCCAATG+AGG | - | chr1_2:74408394-74408413 | Msa0092120:intron | 40.0% |
| !! | TTTTAGGAGAACGCCAATGA+GGG | - | chr1_2:74408395-74408414 | Msa0092120:intron | 40.0% |
| GCTTGGTTGGACAATGATAT+TGG | - | chr1_2:74408738-74408757 | Msa0092120:intron | 40.0% | |
| GTTTAATCTCCATTTGAGGG+AGG | - | chr1_2:74409080-74409099 | Msa0092120:intron | 40.0% | |
| CTGAAGTTCTCTCTCTGTTA+TGG | + | chr1_2:74409381-74409400 | None:intergenic | 40.0% | |
| CATAACAGAGAGAGAACTTC+AGG | - | chr1_2:74409379-74409398 | Msa0092120:three_prime_UTR | 40.0% | |
| ! | CCAAGGTGATGATGAAGTTT+GGG | + | chr1_2:74409474-74409493 | None:intergenic | 40.0% |
| ! | ACCAAGGTGATGATGAAGTT+TGG | + | chr1_2:74409475-74409494 | None:intergenic | 40.0% |
| ! | TGGAAGCATATGACTCTGAT+TGG | + | chr1_2:74409574-74409593 | None:intergenic | 40.0% |
| GAGTTGACATTGTAACCTCA+AGG | + | chr1_2:74409695-74409714 | None:intergenic | 40.0% | |
| AGTTTCCGTAAACTTCCATG+GGG | + | chr1_2:74409736-74409755 | None:intergenic | 40.0% | |
| GTAGTTTCCGTAAACTTCCA+TGG | + | chr1_2:74409738-74409757 | None:intergenic | 40.0% | |
| CAGGTAATGTCTCCCAATTA+AGG | + | chr1_2:74409880-74409899 | None:intergenic | 40.0% | |
| ! | CAGATTTGAAACAAGGTCTC+AGG | + | chr1_2:74409899-74409918 | None:intergenic | 40.0% |
| AGACACTTTGTATCTTTGGG+AGG | - | chr1_2:74410073-74410092 | Msa0092120:intron | 40.0% | |
| ! | CTTTGTATCTTTGGGAGGTA+AGG | - | chr1_2:74410078-74410097 | Msa0092120:intron | 40.0% |
| ! | GATTGTTTCCAGTTGATGTG+GGG | - | chr1_2:74410216-74410235 | Msa0092120:intron | 40.0% |
| !!! | GCTTTTGTTTTAGCACCATC+TGG | + | chr1_2:74410282-74410301 | None:intergenic | 40.0% |
| GTTATTTACTGCAGTTGTCG+GGG | + | chr1_2:74410304-74410323 | None:intergenic | 40.0% | |
| ! | GTGCACTATTTTCTTCTGTG+CGG | + | chr1_2:74410377-74410396 | None:intergenic | 40.0% |
| CACAGAAGAAAATAGTGCAC+TGG | - | chr1_2:74410377-74410396 | Msa0092120:intron | 40.0% | |
| !! | GAATAAGCGGATTTTAACCG+AGG | - | chr1_2:74410434-74410453 | Msa0092120:intron | 40.0% |
| TAAGGGATGGAAAGAAAGAG+AGG | + | chr1_2:74410488-74410507 | None:intergenic | 40.0% | |
| GCACATGTATAAGTAAGGGA+TGG | + | chr1_2:74410501-74410520 | None:intergenic | 40.0% | |
| !! | AGGTGATAAATGCTGCTTTC+AGG | + | chr1_2:74411636-74411655 | None:intergenic | 40.0% |
| ATGAGCTTAGAAGGAGACCT+TGG | - | chr1_2:74403530-74403549 | Msa0092120:three_prime_UTR | 45.0% | |
| TCATCCTCTTCAAGAGTCCA+AGG | + | chr1_2:74403550-74403569 | None:intergenic | 45.0% | |
| CACATTGCTAATCACGGTGA+AGG | - | chr1_2:74403583-74403602 | Msa0092120:three_prime_UTR | 45.0% | |
| GATTGTGAGGAAGAGAGAGA+AGG | + | chr1_2:74405396-74405415 | None:intergenic | 45.0% | |
| CTTTGCATTCTGGTCGAATG+GGG | + | chr1_2:74405741-74405760 | None:intergenic | 45.0% | |
| GCTTTGCATTCTGGTCGAAT+GGG | + | chr1_2:74405742-74405761 | None:intergenic | 45.0% | |
| AGCTTTGCATTCTGGTCGAA+TGG | + | chr1_2:74405743-74405762 | None:intergenic | 45.0% | |
| GGAACATCAGCTTTGCATTC+TGG | + | chr1_2:74405751-74405770 | None:intergenic | 45.0% | |
| AGCCAAAGTTTCACCCTCTA+AGG | - | chr1_2:74405845-74405864 | Msa0092120:intron | 45.0% | |
| CACCTTAGAGGGTGAAACTT+TGG | + | chr1_2:74405850-74405869 | None:intergenic | 45.0% | |
| !! | CACCCTCTAAGGTGAATAAG+TGG | - | chr1_2:74405856-74405875 | Msa0092120:intron | 45.0% |
| GGTGAATAAGTGGGAATTCC+AGG | - | chr1_2:74405866-74405885 | Msa0092120:intron | 45.0% | |
| GAATTCCAGGATTCGAATCC+CGG | - | chr1_2:74405879-74405898 | Msa0092120:intron | 45.0% | |
| AGCCAATGTTGTCAAATGGC+TGG | + | chr1_2:74406143-74406162 | None:intergenic | 45.0% | |
| CTTAAAGTCTTGCCAGACTG+CGG | + | chr1_2:74406413-74406432 | None:intergenic | 45.0% | |
| !! | TTCTGAGACGAATACAGCGA+GGG | - | chr1_2:74406489-74406508 | Msa0092120:three_prime_UTR | 45.0% |
| GGTGTCCATCCTTCAATCAA+AGG | - | chr1_2:74406946-74406965 | Msa0092120:three_prime_UTR | 45.0% | |
| CATACCTCCCCTTTGATTGA+AGG | + | chr1_2:74406958-74406977 | None:intergenic | 45.0% | |
| CTTCAATCAAAGGGGAGGTA+TGG | - | chr1_2:74406956-74406975 | Msa0092120:three_prime_UTR | 45.0% | |
| GAGGTATGGGAGTTCTTACT+AGG | - | chr1_2:74406970-74406989 | Msa0092120:intron | 45.0% | |
| AAAAAGGCAATGGCAACAGC+AGG | + | chr1_2:74407173-74407192 | None:intergenic | 45.0% | |
| CAATGGTGCAGTAGTAGCAA+TGG | + | chr1_2:74407243-74407262 | None:intergenic | 45.0% | |
| TGGGAACAACAATGTAGGCT+AGG | - | chr1_2:74407413-74407432 | Msa0092120:intron | 45.0% | |
| GGGAACAACAATGTAGGCTA+GGG | - | chr1_2:74407414-74407433 | Msa0092120:intron | 45.0% | |
| CAAAAGATAGTCCCAGTCCT+TGG | - | chr1_2:74408210-74408229 | Msa0092120:intron | 45.0% | |
| ATTTCCCACTACCAAGGACT+GGG | + | chr1_2:74408224-74408243 | None:intergenic | 45.0% | |
| AATTTCCCACTACCAAGGAC+TGG | + | chr1_2:74408225-74408244 | None:intergenic | 45.0% | |
| TTTGTTACAACACCCCTCGT+CGG | - | chr1_2:74408243-74408262 | Msa0092120:intron | 45.0% | |
| CCAAAGAAGGATCTATTGGC+TGG | + | chr1_2:74408278-74408297 | None:intergenic | 45.0% | |
| CCAGCCAATAGATCCTTCTT+TGG | - | chr1_2:74408275-74408294 | Msa0092120:intron | 45.0% | |
| ATCCTTAACCGATGCCCTTA+AGG | - | chr1_2:74408534-74408553 | Msa0092120:intron | 45.0% | |
| CTCTCTCTGTTATGGGACAT+AGG | + | chr1_2:74409373-74409392 | None:intergenic | 45.0% | |
| CCCAAACTTCATCATCACCT+TGG | - | chr1_2:74409471-74409490 | Msa0092120:exon | 45.0% | |
| GACATTGTAACCTCAAGGGA+CGG | + | chr1_2:74409690-74409709 | None:intergenic | 45.0% | |
| GATACCCCCATGGAAGTTTA+CGG | - | chr1_2:74409728-74409747 | Msa0092120:intron | 45.0% | |
| GTTTCCGTAAACTTCCATGG+GGG | + | chr1_2:74409735-74409754 | None:intergenic | 45.0% | |
| ATGTCTCCCAATTAAGGGAG+AGG | + | chr1_2:74409874-74409893 | None:intergenic | 45.0% | |
| ! | GCCGAGACAGATTTGAAACA+AGG | + | chr1_2:74409906-74409925 | None:intergenic | 45.0% |
| TTCGCAGAGGATTTAGATGG+TGG | - | chr1_2:74409990-74410009 | Msa0092120:intron | 45.0% | |
| TAACGATATGATGGCAGCTG+TGG | - | chr1_2:74411335-74411354 | Msa0092120:intron | 45.0% | |
| !!! | GATTTTAAATAAAATAATAA+GGG | + | chr1_2:74404748-74404767 | None:intergenic | 5.0% |
| !!! | TGATTTTAAATAAAATAATA+AGG | + | chr1_2:74404749-74404768 | None:intergenic | 5.0% |
| !! | AAAATAAAGATAAAAAAAAA+AGG | + | chr1_2:74408111-74408130 | None:intergenic | 5.0% |
| GAGACCTTGGACTCTTGAAG+AGG | - | chr1_2:74403543-74403562 | Msa0092120:three_prime_UTR | 50.0% | |
| CTAATCACGGTGAAGGGAGA+TGG | - | chr1_2:74403590-74403609 | Msa0092120:three_prime_UTR | 50.0% | |
| TATGTCCGGGATTCGAATCC+TGG | + | chr1_2:74405887-74405906 | None:intergenic | 50.0% | |
| !! | GTTCTGAGACGAATACAGCG+AGG | - | chr1_2:74406488-74406507 | Msa0092120:three_prime_UTR | 50.0% |
| ! | TCTGAGACGAATACAGCGAG+GGG | - | chr1_2:74406490-74406509 | Msa0092120:three_prime_UTR | 50.0% |
| CCTCCCCTTTGATTGAAGGA+TGG | + | chr1_2:74406954-74406973 | None:intergenic | 50.0% | |
| CCATCCTTCAATCAAAGGGG+AGG | - | chr1_2:74406951-74406970 | Msa0092120:three_prime_UTR | 50.0% | |
| ACTCACGATCCAGATCGGTA+AGG | - | chr1_2:74407842-74407861 | Msa0092120:intron | 50.0% | |
| TTTGCTCTGCCTTACCGATC+TGG | + | chr1_2:74407854-74407873 | None:intergenic | 50.0% | |
| ATAGTCCCAGTCCTTGGTAG+TGG | - | chr1_2:74408216-74408235 | Msa0092120:intron | 50.0% | |
| ! | TAGTCCCAGTCCTTGGTAGT+GGG | - | chr1_2:74408217-74408236 | Msa0092120:intron | 50.0% |
| AATGCTCTTAGGGCCCTCAT+TGG | + | chr1_2:74408411-74408430 | None:intergenic | 50.0% | |
| ! | AATGAGGGCCCTAAGAGCAT+TGG | - | chr1_2:74408410-74408429 | Msa0092120:intron | 50.0% |
| !! | TGCCTTAAGGGCATCGGTTA+AGG | + | chr1_2:74408539-74408558 | None:intergenic | 50.0% |
| ! | AACGAGTGCCTTAAGGGCAT+CGG | + | chr1_2:74408545-74408564 | None:intergenic | 50.0% |
| CAAACAAGGCCTCCCTCAAA+TGG | + | chr1_2:74409092-74409111 | None:intergenic | 50.0% | |
| !! | TGAGGGAGGCCTTGTTTGAT+AGG | - | chr1_2:74409094-74409113 | Msa0092120:intron | 50.0% |
| CTCTGTTATGGGACATAGGC+AGG | + | chr1_2:74409369-74409388 | None:intergenic | 50.0% | |
| GAGAGAGAACTTCAGGGTCA+CGG | - | chr1_2:74409386-74409405 | Msa0092120:three_prime_UTR | 50.0% | |
| AGGGTCACGGCAACTTCAAT+GGG | - | chr1_2:74409399-74409418 | Msa0092120:three_prime_UTR | 50.0% | |
| ! | AATGGGGGTGCAAACTCAGT+TGG | - | chr1_2:74409416-74409435 | Msa0092120:three_prime_UTR | 50.0% |
| ! | ATGGGGGTGCAAACTCAGTT+GGG | - | chr1_2:74409417-74409436 | Msa0092120:three_prime_UTR | 50.0% |
| CAGAGTCATATGCTTCCACG+TGG | - | chr1_2:74409576-74409595 | Msa0092120:intron | 50.0% | |
| ! | GTTTTCAACTCCGTCCCTTG+AGG | - | chr1_2:74409677-74409696 | Msa0092120:intron | 50.0% |
| TTGGGGACCTCTCCCTTAAT+TGG | - | chr1_2:74409864-74409883 | Msa0092120:intron | 50.0% | |
| TGGGGACCTCTCCCTTAATT+GGG | - | chr1_2:74409865-74409884 | Msa0092120:intron | 50.0% | |
| CTTTGCGTTTCGCATGCTGA+TGG | - | chr1_2:74410022-74410041 | Msa0092120:intron | 50.0% | |
| ! | TTTCCAGTTGATGTGGGGCA+TGG | - | chr1_2:74410221-74410240 | Msa0092120:intron | 50.0% |
| ATTCCATGCCCCACATCAAC+TGG | + | chr1_2:74410227-74410246 | None:intergenic | 50.0% | |
| GCTAAGTACGAGGATCCAGA+TGG | - | chr1_2:74410264-74410283 | Msa0092120:intron | 50.0% | |
| !! | CGGATTTTAACCGAGGCCAA+GGG | - | chr1_2:74410441-74410460 | Msa0092120:intron | 50.0% |
| GACAACATCATCCACACCCT+TGG | + | chr1_2:74410460-74410479 | None:intergenic | 50.0% | |
| GGGTGTGGATGATGTTGTCA+AGG | - | chr1_2:74410461-74410480 | Msa0092120:intron | 50.0% | |
| GGAATGAGCTCAAGCAACGC+CGG | - | chr1_2:74407025-74407044 | Msa0092120:intron | 55.0% | |
| ! | AGGAAGCATGGCCATCCAAG+AGG | + | chr1_2:74407290-74407309 | None:intergenic | 55.0% |
| CCACATATCATACTGCCCCC+TGG | + | chr1_2:74408178-74408197 | None:intergenic | 55.0% | |
| CCAGGGGGCAGTATGATATG+TGG | - | chr1_2:74408175-74408194 | Msa0092120:three_prime_UTR | 55.0% | |
| CTACCATCCTTCGCATCGCA+CGG | + | chr1_2:74408934-74408953 | None:intergenic | 55.0% | |
| !! | GGGAGGCCTTGTTTGATAGG+AGG | - | chr1_2:74409097-74409116 | Msa0092120:intron | 55.0% |
| CAGGGTCACGGCAACTTCAA+TGG | - | chr1_2:74409398-74409417 | Msa0092120:three_prime_UTR | 55.0% | |
| GGGTCACGGCAACTTCAATG+GGG | - | chr1_2:74409400-74409419 | Msa0092120:three_prime_UTR | 55.0% | |
| GGTCACGGCAACTTCAATGG+GGG | - | chr1_2:74409401-74409420 | Msa0092120:three_prime_UTR | 55.0% | |
| TCGCTAAGCTGATACCCCCA+TGG | - | chr1_2:74409718-74409737 | Msa0092120:intron | 55.0% | |
| !! | GCGGATTTTAACCGAGGCCA+AGG | - | chr1_2:74410440-74410459 | Msa0092120:intron | 55.0% |
| TTTAACCGAGGCCAAGGGTG+TGG | - | chr1_2:74410446-74410465 | Msa0092120:intron | 55.0% | |
| ATCATCCACACCCTTGGCCT+CGG | + | chr1_2:74410454-74410473 | None:intergenic | 55.0% | |
| GTCAGGAGCAACTGAAGCCT+GGG | + | chr1_2:74411375-74411394 | None:intergenic | 55.0% | |
| AGTCAGGAGCAACTGAAGCC+TGG | + | chr1_2:74411376-74411395 | None:intergenic | 55.0% | |
| AGGCTTCAGTTGCTCCTGAC+TGG | - | chr1_2:74411375-74411394 | Msa0092120:intron | 55.0% | |
| ATGAGCTCAAGCAACGCCGG+AGG | - | chr1_2:74407028-74407047 | Msa0092120:intron | 60.0% | |
| ACACCCCTCGTCGGTGATGA+TGG | - | chr1_2:74408252-74408271 | Msa0092120:intron | 60.0% | |
| TGGCCATCATCACCGACGAG+GGG | + | chr1_2:74408258-74408277 | None:intergenic | 60.0% | |
| CTGGCCATCATCACCGACGA+GGG | + | chr1_2:74408259-74408278 | None:intergenic | 60.0% | |
| GCTTTGACCGTGCGATGCGA+AGG | - | chr1_2:74408924-74408943 | Msa0092120:intron | 60.0% | |
| TGACCGTGCGATGCGAAGGA+TGG | - | chr1_2:74408928-74408947 | Msa0092120:intron | 60.0% | |
| CGTGCGATGCGAAGGATGGT+AGG | - | chr1_2:74408932-74408951 | Msa0092120:intron | 60.0% | |
| TGGTTGCGCGTGATCTTCCC+AGG | - | chr1_2:74411355-74411374 | Msa0092120:intron | 60.0% | |
| GCTGGCCATCATCACCGACG+AGG | + | chr1_2:74408260-74408279 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 74403508 | 74411659 | 74403508 | ID=Msa0092120;Name=Msa0092120 |
| chr1_2 | mRNA | 74403508 | 74411659 | 74403508 | ID=Msa0092120-mRNA-1;Parent=Msa0092120;Name=Msa0092120-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.90|0.91|0.91|0.81|0.83|12|1607|72 |
| chr1_2 | exon | 74403508 | 74403869 | 74403508 | ID=Msa0092120-mRNA-1:exon:26256;Parent=Msa0092120-mRNA-1 |
| chr1_2 | exon | 74404502 | 74404585 | 74404502 | ID=Msa0092120-mRNA-1:exon:26255;Parent=Msa0092120-mRNA-1 |
| chr1_2 | exon | 74404685 | 74404950 | 74404685 | ID=Msa0092120-mRNA-1:exon:26254;Parent=Msa0092120-mRNA-1 |
| chr1_2 | exon | 74405073 | 74405170 | 74405073 | ID=Msa0092120-mRNA-1:exon:26253;Parent=Msa0092120-mRNA-1 |
| chr1_2 | exon | 74405675 | 74405780 | 74405675 | ID=Msa0092120-mRNA-1:exon:26252;Parent=Msa0092120-mRNA-1 |
| chr1_2 | exon | 74406218 | 74406306 | 74406218 | ID=Msa0092120-mRNA-1:exon:26251;Parent=Msa0092120-mRNA-1 |
| chr1_2 | exon | 74406396 | 74406518 | 74406396 | ID=Msa0092120-mRNA-1:exon:26250;Parent=Msa0092120-mRNA-1 |
| chr1_2 | exon | 74406810 | 74406988 | 74406810 | ID=Msa0092120-mRNA-1:exon:26249;Parent=Msa0092120-mRNA-1 |
| chr1_2 | exon | 74408118 | 74408221 | 74408118 | ID=Msa0092120-mRNA-1:exon:26248;Parent=Msa0092120-mRNA-1 |
| chr1_2 | exon | 74408656 | 74408751 | 74408656 | ID=Msa0092120-mRNA-1:exon:26247;Parent=Msa0092120-mRNA-1 |
| chr1_2 | exon | 74409375 | 74409566 | 74409375 | ID=Msa0092120-mRNA-1:exon:26246;Parent=Msa0092120-mRNA-1 |
| chr1_2 | exon | 74411533 | 74411659 | 74411533 | ID=Msa0092120-mRNA-1:exon:26245;Parent=Msa0092120-mRNA-1 |
| chr1_2 | CDS | 74411533 | 74411659 | 74411533 | ID=Msa0092120-mRNA-1:cds;Parent=Msa0092120-mRNA-1 |
| chr1_2 | CDS | 74409475 | 74409566 | 74409475 | ID=Msa0092120-mRNA-1:cds;Parent=Msa0092120-mRNA-1 |
| chr1_2 | three_prime_UTR | 74409375 | 74409474 | 74409375 | ID=Msa0092120-mRNA-1:three_prime_utr;Parent=Msa0092120-mRNA-1 |
| chr1_2 | three_prime_UTR | 74408656 | 74408751 | 74408656 | ID=Msa0092120-mRNA-1:three_prime_utr;Parent=Msa0092120-mRNA-1 |
| chr1_2 | three_prime_UTR | 74408118 | 74408221 | 74408118 | ID=Msa0092120-mRNA-1:three_prime_utr;Parent=Msa0092120-mRNA-1 |
| chr1_2 | three_prime_UTR | 74406810 | 74406988 | 74406810 | ID=Msa0092120-mRNA-1:three_prime_utr;Parent=Msa0092120-mRNA-1 |
| chr1_2 | three_prime_UTR | 74406396 | 74406518 | 74406396 | ID=Msa0092120-mRNA-1:three_prime_utr;Parent=Msa0092120-mRNA-1 |
| chr1_2 | three_prime_UTR | 74406218 | 74406306 | 74406218 | ID=Msa0092120-mRNA-1:three_prime_utr;Parent=Msa0092120-mRNA-1 |
| chr1_2 | three_prime_UTR | 74405675 | 74405780 | 74405675 | ID=Msa0092120-mRNA-1:three_prime_utr;Parent=Msa0092120-mRNA-1 |
| chr1_2 | three_prime_UTR | 74405073 | 74405170 | 74405073 | ID=Msa0092120-mRNA-1:three_prime_utr;Parent=Msa0092120-mRNA-1 |
| chr1_2 | three_prime_UTR | 74404685 | 74404950 | 74404685 | ID=Msa0092120-mRNA-1:three_prime_utr;Parent=Msa0092120-mRNA-1 |
| chr1_2 | three_prime_UTR | 74404502 | 74404585 | 74404502 | ID=Msa0092120-mRNA-1:three_prime_utr;Parent=Msa0092120-mRNA-1 |
| chr1_2 | three_prime_UTR | 74403508 | 74403869 | 74403508 | ID=Msa0092120-mRNA-1:three_prime_utr;Parent=Msa0092120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
