Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094800 | XP_039689049.1 | 90.998 | 1122 | 62 | 4 | 29 | 1136 | 1 | 1097 | 0.0 | 2061 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094800 | sp|F4J738|SAD2H_ARATH | 22.222 | 639 | 379 | 29 | 42 | 640 | 14 | 574 | 1.80e-12 | 75.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094800 | A0A396IFS0 | 90.998 | 1122 | 62 | 4 | 29 | 1136 | 1 | 1097 | 0.0 | 2061 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094800 | Msa0580250 | 0.803454 | 3.459157e-49 | -8.615850e-47 |
| Msa0094800 | Msa0883720 | 0.831374 | 1.730557e-55 | -8.615850e-47 |
| Msa0094800 | Msa1192550 | 0.900026 | 1.105760e-77 | -8.615850e-47 |
| Msa0094800 | Msa1192580 | 0.865777 | 4.616129e-65 | -8.615850e-47 |
| Msa0094800 | Msa1451040 | 0.813897 | 2.028080e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094800 | MtrunA17_Chr4g0069091 | 90.998 | 1122 | 62 | 4 | 29 | 1136 | 1 | 1097 | 0.0 | 2061 |
| Msa0094800 | MtrunA17_Chr7g0221671 | 22.671 | 644 | 386 | 27 | 35 | 640 | 6 | 575 | 7.52e-16 | 83.2 |
| Msa0094800 | MtrunA17_Chr1g0213861 | 21.890 | 635 | 398 | 22 | 35 | 640 | 4 | 569 | 2.08e-15 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094800 | AT3G17340.2 | 54.162 | 973 | 415 | 10 | 35 | 988 | 11 | 971 | 0.0 | 1023 |
| Msa0094800 | AT3G17340.1 | 54.227 | 970 | 416 | 10 | 35 | 988 | 11 | 968 | 0.0 | 1023 |
| Msa0094800 | AT3G59020.1 | 22.222 | 639 | 379 | 29 | 42 | 640 | 14 | 574 | 1.73e-13 | 75.9 |
| Msa0094800 | AT3G59020.2 | 22.222 | 639 | 379 | 29 | 42 | 640 | 14 | 574 | 1.83e-13 | 75.9 |
Find 277 sgRNAs with CRISPR-Local
Find 614 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCACTTCTCAGACCCTTTC+AGG | 0.144240 | 1_2:+78149684 | Msa0094800:CDS |
| TTTATCAGCCAAACGTAAAA+AGG | 0.185848 | 1_2:+78152420 | Msa0094800:CDS |
| GAATGTTAGCAAGGAGTTTA+AGG | 0.217005 | 1_2:+78149355 | Msa0094800:CDS |
| CAAGGGCACGATAATTTCTT+TGG | 0.238061 | 1_2:-78150151 | None:intergenic |
| ATTATACCTTCTACAATTTC+AGG | 0.249830 | 1_2:-78156027 | None:intergenic |
| AAGCAACCAGCGCCGTTCTA+TGG | 0.256132 | 1_2:+78152459 | Msa0094800:CDS |
| AAGATGGAGGCATCACAATT+TGG | 0.261603 | 1_2:+78156061 | Msa0094800:CDS |
| GATTATTCACTCGAAATATC+AGG | 0.267649 | 1_2:+78157718 | Msa0094800:three_prime_UTR |
| CCTGTGCGGGTTTCTGCTGC+TGG | 0.267830 | 1_2:+78153587 | Msa0094800:CDS |
| TCAGCTTCTCACTTCAATTA+TGG | 0.272429 | 1_2:+78153807 | Msa0094800:CDS |
| CAAGAACTGGATATGGAATT+AGG | 0.293684 | 1_2:+78157207 | Msa0094800:CDS |
| AAAGAAATTGTGAATTTAGA+TGG | 0.297865 | 1_2:+78155679 | Msa0094800:CDS |
| TCATATATGGCAGTTACTTT+GGG | 0.299686 | 1_2:+78153094 | Msa0094800:intron |
| AGAGCACAATTTATAATATC+TGG | 0.301452 | 1_2:-78151375 | None:intergenic |
| TGTATATTCTCAATTGCTTA+TGG | 0.306590 | 1_2:+78153526 | Msa0094800:CDS |
| CAATGTTGCTAACTATTACT+TGG | 0.316604 | 1_2:-78153753 | None:intergenic |
| GTGTGAACGTTGGTGGCGTC+GGG | 0.319092 | 1_2:-78149085 | None:intergenic |
| ATCATATATGGCAGTTACTT+TGG | 0.322261 | 1_2:+78153093 | Msa0094800:intron |
| TGCAGATTCGGCACAAGTTC+CGG | 0.322757 | 1_2:-78149583 | None:intergenic |
| TGGCGTCGGGGCTGAGGGTT+TGG | 0.325331 | 1_2:-78149072 | None:intergenic |
| ACCGGCTCCTTCGGAACTTT+GGG | 0.325806 | 1_2:-78150105 | None:intergenic |
| CTGCACTGTTGCAGCAGGTT+TGG | 0.326449 | 1_2:+78154861 | Msa0094800:CDS |
| GGGAGAGAATCCTCTCTAAA+AGG | 0.327040 | 1_2:-78151732 | None:intergenic |
| CGTTGGTGGCGTCGGGGCTG+AGG | 0.328761 | 1_2:-78149078 | None:intergenic |
| ACCTCATTGCTAGCGCAAAC+TGG | 0.333595 | 1_2:+78153325 | Msa0094800:CDS |
| AAACTGCTTCACTTCACTAA+TGG | 0.340507 | 1_2:+78156803 | Msa0094800:CDS |
| TGGAGAAGGGGTAGAAAATC+AGG | 0.345138 | 1_2:-78153733 | None:intergenic |
| CGAAGATCAAGAACTGGATA+TGG | 0.353329 | 1_2:+78157200 | Msa0094800:CDS |
| TTGTAATTCTTTCAACTGAA+TGG | 0.353975 | 1_2:-78156832 | None:intergenic |
| AATCGCTGCTCTGGCAGTTA+TGG | 0.356153 | 1_2:+78154736 | Msa0094800:CDS |
| CTCACTTCAATTATGGAAGT+TGG | 0.358075 | 1_2:+78153814 | Msa0094800:CDS |
| GGTGTATTTCATCAATTTGT+TGG | 0.366527 | 1_2:+78150177 | Msa0094800:CDS |
| TTCTCATTCATTACCAATGC+TGG | 0.367696 | 1_2:-78151982 | None:intergenic |
| TGAAATTGTAGAAGGTATAA+TGG | 0.368284 | 1_2:+78156029 | Msa0094800:CDS |
| CGTTCAATTGTAGAAGGAAT+TGG | 0.369905 | 1_2:+78155769 | Msa0094800:CDS |
| TACCGGCTCCTTCGGAACTT+TGG | 0.376762 | 1_2:-78150106 | None:intergenic |
| TCTTCTATGCATGATGAATT+CGG | 0.380112 | 1_2:-78155499 | None:intergenic |
| TGTTATCCTGAAATTGTAGA+AGG | 0.380797 | 1_2:+78156021 | Msa0094800:CDS |
| GGCAGAAGGATATTGCTTAA+TGG | 0.382188 | 1_2:-78155809 | None:intergenic |
| CTTTGGATACGAGCTCCAAT+TGG | 0.386810 | 1_2:-78150134 | None:intergenic |
| ATGGGACGATGTGTGGGATA+TGG | 0.387245 | 1_2:-78153855 | None:intergenic |
| TAGAGGCTTCCAAAGGGAAC+TGG | 0.388145 | 1_2:-78155971 | None:intergenic |
| TTGTGGGTTCAGTCTCAAAA+TGG | 0.389428 | 1_2:+78153881 | Msa0094800:CDS |
| CGGAAGAAGAATTTCTTGAT+AGG | 0.391493 | 1_2:+78157120 | Msa0094800:CDS |
| TGTAGAAGGTATAATGGAAA+AGG | 0.392818 | 1_2:+78156035 | Msa0094800:CDS |
| CTCTACTGAATTCGTTTAGT+AGG | 0.394398 | 1_2:+78151118 | Msa0094800:CDS |
| AAGATGTATATTTGACTAGA+TGG | 0.394680 | 1_2:+78151193 | Msa0094800:CDS |
| TGAATAGCAGATTGCAGATT+CGG | 0.400057 | 1_2:-78149595 | None:intergenic |
| GATTCAGAATCAGATACTTC+AGG | 0.400279 | 1_2:-78154782 | None:intergenic |
| GGTGTGAACGTTGGTGGCGT+CGG | 0.401130 | 1_2:-78149086 | None:intergenic |
| CCTTCTACAATTGAACGTTC+AGG | 0.402070 | 1_2:-78155763 | None:intergenic |
| TGGGGTGGTACCGGCTCCTT+CGG | 0.406814 | 1_2:-78150114 | None:intergenic |
| TAGAGAATCTTTAATTCATC+GGG | 0.408078 | 1_2:-78157939 | None:intergenic |
| ACGGTCGAGCTCGGCGGTGG+AGG | 0.408213 | 1_2:-78149107 | None:intergenic |
| AGATGGAGGCATCACAATTT+GGG | 0.409436 | 1_2:+78156062 | Msa0094800:CDS |
| CAAGAAGTATCCTGCTTATC+CGG | 0.410998 | 1_2:-78153560 | None:intergenic |
| CAGTCTGGAGCCTTGGCCTC+AGG | 0.411678 | 1_2:+78153912 | Msa0094800:CDS |
| GGCACAGGTGGAGCTGGAGG+GGG | 0.412142 | 1_2:-78155742 | None:intergenic |
| TTTGGATACGAGCTCCAATT+GGG | 0.414683 | 1_2:-78150133 | None:intergenic |
| CTGAATGCCTTCCCTGGGTG+TGG | 0.415942 | 1_2:+78157630 | Msa0094800:CDS |
| GGCTGAAGATGATGAGGATG+AGG | 0.416573 | 1_2:+78156878 | Msa0094800:CDS |
| AAGATGCTGATGAGTATATA+CGG | 0.421687 | 1_2:+78152118 | Msa0094800:CDS |
| AGTAGAGGAGCTAGAGTTGA+TGG | 0.422542 | 1_2:-78151102 | None:intergenic |
| GGAGCCGGTACCACCCCAAT+TGG | 0.423828 | 1_2:+78150119 | Msa0094800:CDS |
| TGTCAGAGCTGCTGTCAGTT+TGG | 0.423854 | 1_2:+78155590 | Msa0094800:CDS |
| GGGGAAATTACCGGCGGAAA+TGG | 0.424520 | 1_2:-78149167 | None:intergenic |
| GTTGGTGGCGTCGGGGCTGA+GGG | 0.426656 | 1_2:-78149077 | None:intergenic |
| ATCGCTGCTCTGGCAGTTAT+GGG | 0.430547 | 1_2:+78154737 | Msa0094800:CDS |
| CTAGTTTCAGTCTAACGTAT+TGG | 0.431738 | 1_2:-78148967 | None:intergenic |
| CTGTGCGGGTTTCTGCTGCT+GGG | 0.438483 | 1_2:+78153588 | Msa0094800:CDS |
| AAGAACAATAAGTGCATTGA+TGG | 0.438486 | 1_2:-78149659 | None:intergenic |
| CGTTCAGGCACAGGTGGAGC+TGG | 0.441676 | 1_2:-78155748 | None:intergenic |
| TATATTCAGGATGAAATTTG+TGG | 0.442837 | 1_2:+78152224 | Msa0094800:intron |
| CTTGATAGGTATGCTAAAGC+TGG | 0.443665 | 1_2:+78157134 | Msa0094800:CDS |
| CCTGAACGTTCAATTGTAGA+AGG | 0.443900 | 1_2:+78155763 | Msa0094800:CDS |
| ATTGAGCAACTCTTGAATCA+AGG | 0.444229 | 1_2:+78156756 | Msa0094800:CDS |
| ACACAAATAGCACAAAGATA+TGG | 0.446722 | 1_2:-78156001 | None:intergenic |
| AGCAACCAGCGCCGTTCTAT+GGG | 0.447207 | 1_2:+78152460 | Msa0094800:CDS |
| TCAACTAAAATCTTGAGAAT+AGG | 0.450318 | 1_2:-78149413 | None:intergenic |
| GCTAGCGCAAACTGGGTACT+TGG | 0.450659 | 1_2:+78153333 | Msa0094800:CDS |
| AAATGTTTGTTCCAAGGAGC+AGG | 0.450670 | 1_2:+78157746 | Msa0094800:three_prime_UTR |
| TTTGGGGTACTGATGGCATA+TGG | 0.450672 | 1_2:+78153111 | Msa0094800:CDS |
| CACAGAACCTTGTAGACAAA+AGG | 0.452530 | 1_2:-78156995 | None:intergenic |
| TGACAGAGCAGACATGGAAA+TGG | 0.452858 | 1_2:+78150298 | Msa0094800:CDS |
| GAAGCGAACCCAGTTCCCTT+TGG | 0.454401 | 1_2:+78155962 | Msa0094800:CDS |
| TTTCCATGTCTGCTCTGTCA+TGG | 0.455872 | 1_2:-78150295 | None:intergenic |
| GAAATTATCGTGCCCTTGCT+TGG | 0.456816 | 1_2:+78150156 | Msa0094800:CDS |
| TGATGTAATTTCAAATGTGC+TGG | 0.457343 | 1_2:+78151762 | Msa0094800:CDS |
| TCTGTCGTGCTATCTGTTGA+TGG | 0.458223 | 1_2:+78155541 | Msa0094800:CDS |
| AGCTCCAATTGGGGTGGTAC+CGG | 0.462517 | 1_2:-78150123 | None:intergenic |
| AAGATTTGTCAACTTTGTTA+CGG | 0.462733 | 1_2:+78155518 | Msa0094800:CDS |
| GTGTCTGACCTCTGGTAGAC+AGG | 0.464473 | 1_2:-78153367 | None:intergenic |
| GTTCAGTTTATTATTGAAGA+GGG | 0.465996 | 1_2:+78157171 | Msa0094800:CDS |
| TACTTCTTGTTATCCTGTGC+GGG | 0.466682 | 1_2:+78153574 | Msa0094800:CDS |
| GCTTATGGCATTGATTATAC+CGG | 0.467969 | 1_2:+78153541 | Msa0094800:CDS |
| TAACGTCCAGTCTGGAGCCT+TGG | 0.470061 | 1_2:+78153905 | Msa0094800:CDS |
| TATTTGACTAGATGGAAGTC+TGG | 0.471684 | 1_2:+78151201 | Msa0094800:CDS |
| ATTTCAAATGTGCTGGAGAC+TGG | 0.474308 | 1_2:+78151769 | Msa0094800:CDS |
| AGTAGCCTCAAAAGAGCTGC+TGG | 0.474345 | 1_2:-78156106 | None:intergenic |
| AATCCACGGCAGCAACAATT+CGG | 0.474353 | 1_2:-78149540 | None:intergenic |
| CAAGTAATAGTTAGCAACAT+TGG | 0.474445 | 1_2:+78153754 | Msa0094800:CDS |
| GCCGTGGATCAGGCAGCAAT+TGG | 0.475253 | 1_2:+78154827 | Msa0094800:CDS |
| CAGGCACAGGTGGAGCTGGA+GGG | 0.475984 | 1_2:-78155744 | None:intergenic |
| GTAGAAGGTATAATGGAAAA+GGG | 0.476574 | 1_2:+78156036 | Msa0094800:CDS |
| TGAGCGTGGAATCGCTGCTC+TGG | 0.476673 | 1_2:+78154727 | Msa0094800:CDS |
| GAGACGGTCGAGCTCGGCGG+TGG | 0.478885 | 1_2:-78149110 | None:intergenic |
| CACATCGTCCCATCTCTTGT+GGG | 0.479373 | 1_2:+78153865 | Msa0094800:CDS |
| GTATGCTAAAGCTGGGGCAT+TGG | 0.481146 | 1_2:+78157142 | Msa0094800:CDS |
| GAGACTGAACCCACAAGAGA+TGG | 0.481151 | 1_2:-78153874 | None:intergenic |
| TGGAAATTCGCGGTGTTGCT+CGG | 0.485040 | 1_2:-78149015 | None:intergenic |
| AAAGATATGGCAAGCAATAG+AGG | 0.485195 | 1_2:-78155988 | None:intergenic |
| TCAGTTTCAATTGAGTATGT+TGG | 0.485998 | 1_2:-78155874 | None:intergenic |
| GTAGAGAATCTTTAATTCAT+CGG | 0.487150 | 1_2:-78157940 | None:intergenic |
| TTTGGCTGATAAACTGTCAA+TGG | 0.487883 | 1_2:-78152410 | None:intergenic |
| CATGTTGGAATCAGAAGGAA+TGG | 0.491369 | 1_2:-78152518 | None:intergenic |
| GTTCCGAATTGTTGCTGCCG+TGG | 0.491398 | 1_2:+78149537 | Msa0094800:intron |
| ATCTGCAATCTTCCCAGCAT+TGG | 0.491649 | 1_2:+78151969 | Msa0094800:CDS |
| TTAGAGAGGATTCTCTCCCT+AGG | 0.491861 | 1_2:+78151736 | Msa0094800:CDS |
| ATGATGAATTCGGAAAATTC+TGG | 0.492503 | 1_2:-78155489 | None:intergenic |
| TGTATAGGACATGTCAGATT+GGG | 0.493213 | 1_2:+78152092 | Msa0094800:intron |
| TGGTGTTATTTCAATGTCAA+AGG | 0.494392 | 1_2:+78152295 | Msa0094800:CDS |
| GGCTGAGGGTTTGGTTGAGA+AGG | 0.494636 | 1_2:-78149063 | None:intergenic |
| ATTTCATCAATTTGTTGGAA+AGG | 0.495585 | 1_2:+78150182 | Msa0094800:CDS |
| TTGAAATTACATCAAAACCT+AGG | 0.495804 | 1_2:-78151753 | None:intergenic |
| ACACATCGTCCCATCTCTTG+TGG | 0.496692 | 1_2:+78153864 | Msa0094800:CDS |
| TGAAATTTGTGGATGGAGGG+AGG | 0.496969 | 1_2:+78152235 | Msa0094800:CDS |
| AAAATGGCTAACGTCCAGTC+TGG | 0.497193 | 1_2:+78153897 | Msa0094800:CDS |
| CTGAGGCCAAGGCTCCAGAC+TGG | 0.497684 | 1_2:-78153911 | None:intergenic |
| ATAATGGAAAAGGGTGAAGA+TGG | 0.498545 | 1_2:+78156045 | Msa0094800:CDS |
| TCAGGCACAGGTGGAGCTGG+AGG | 0.500164 | 1_2:-78155745 | None:intergenic |
| TCTACTGAATTCGTTTAGTA+GGG | 0.500516 | 1_2:+78151119 | Msa0094800:CDS |
| GTCTAACGTATTGGCGGGAA+GGG | 0.501333 | 1_2:-78148958 | None:intergenic |
| ATTGATTATACCGGATAAGC+AGG | 0.503735 | 1_2:+78153550 | Msa0094800:CDS |
| TGCTAACTATTACTTGGAGA+AGG | 0.503788 | 1_2:-78153747 | None:intergenic |
| AGGAGATGGAAAGGGAAGTG+AGG | 0.504262 | 1_2:-78149142 | None:intergenic |
| GCATTTGCATATTGTGAGGA+TGG | 0.504304 | 1_2:-78150327 | None:intergenic |
| CGGCGGAAATGGAGAGGAGA+TGG | 0.505405 | 1_2:-78149156 | None:intergenic |
| ACAATTGAACGTTCAGGCAC+AGG | 0.509772 | 1_2:-78155757 | None:intergenic |
| ATGATGGTATTTGTCTATCA+AGG | 0.509981 | 1_2:-78157559 | None:intergenic |
| AGGCACAGGTGGAGCTGGAG+GGG | 0.510321 | 1_2:-78155743 | None:intergenic |
| AAATGGAGAGGAGATGGAAA+GGG | 0.510970 | 1_2:-78149150 | None:intergenic |
| TGAAGGTGTAAAGCAGTCAT+TGG | 0.512410 | 1_2:+78155894 | Msa0094800:CDS |
| AAAGAATTACAAGATGAGAA+AGG | 0.513753 | 1_2:+78156843 | Msa0094800:CDS |
| AGGATGAAATTTGTGGATGG+AGG | 0.517304 | 1_2:+78152231 | Msa0094800:intron |
| GACGGAGAGACGGTCGAGCT+CGG | 0.517469 | 1_2:-78149116 | None:intergenic |
| GCTAACTATTACTTGGAGAA+GGG | 0.519103 | 1_2:-78153746 | None:intergenic |
| TGAAATTACATCAAAACCTA+GGG | 0.519223 | 1_2:-78151752 | None:intergenic |
| AGTGAGAAGCTGAAATAAGA+TGG | 0.520318 | 1_2:-78153797 | None:intergenic |
| ATGTATAGGACATGTCAGAT+TGG | 0.520551 | 1_2:+78152091 | Msa0094800:intron |
| CAATACGTTAGACTGAAACT+AGG | 0.523147 | 1_2:+78148968 | Msa0094800:CDS |
| TTGATAGGTATGCTAAAGCT+GGG | 0.524999 | 1_2:+78157135 | Msa0094800:CDS |
| TGAGAAAGGAGATGAAGAAG+AGG | 0.526073 | 1_2:+78156857 | Msa0094800:CDS |
| CCTCATTGCTAGCGCAAACT+GGG | 0.526833 | 1_2:+78153326 | Msa0094800:CDS |
| AACATTCGAAGGTGTGGCGC+CGG | 0.529745 | 1_2:-78149339 | None:intergenic |
| GGATGTCGAAGATCAAGAAC+TGG | 0.532331 | 1_2:+78157194 | Msa0094800:CDS |
| ATTATTCACTCGAAATATCA+GGG | 0.534591 | 1_2:+78157719 | Msa0094800:three_prime_UTR |
| TGGCAGTTATGGGTCAGACA+TGG | 0.536229 | 1_2:+78154747 | Msa0094800:CDS |
| TTCAATTATGGAAGTTGGAG+AGG | 0.536320 | 1_2:+78153819 | Msa0094800:CDS |
| CGCCGCAATGTTGATATCAC+CGG | 0.536536 | 1_2:+78149320 | Msa0094800:CDS |
| TCAACAGGAGGTGAAAATCA+AGG | 0.536898 | 1_2:+78149257 | Msa0094800:intron |
| TCTCATTCATTACCAATGCT+GGG | 0.537036 | 1_2:-78151981 | None:intergenic |
| AGCAACACCGCGAATTTCCA+TGG | 0.537669 | 1_2:+78149018 | Msa0094800:CDS |
| TTGAGCAACTCTTGAATCAA+GGG | 0.538482 | 1_2:+78156757 | Msa0094800:CDS |
| CAGTTACTTTGGGGTACTGA+TGG | 0.538531 | 1_2:+78153104 | Msa0094800:intron |
| CATTACTTACTGCGAAATGT+AGG | 0.538556 | 1_2:-78150349 | None:intergenic |
| TTTCAGTCTAACGTATTGGC+GGG | 0.540297 | 1_2:-78148963 | None:intergenic |
| TCCAATAGAGTTGTAAAATG+TGG | 0.541694 | 1_2:-78151946 | None:intergenic |
| TGTGAAACATAGTTTATGGC+CGG | 0.542404 | 1_2:+78149564 | Msa0094800:CDS |
| TCAACACACACCTGAGGCCA+AGG | 0.542867 | 1_2:-78153922 | None:intergenic |
| AACTGGGTACTTGGAGAACT+AGG | 0.542910 | 1_2:+78153342 | Msa0094800:CDS |
| AATACGTTAGACTGAAACTA+GGG | 0.543715 | 1_2:+78148969 | Msa0094800:CDS |
| AAACTAACCTGTGTGGATAA+CGG | 0.543886 | 1_2:-78154890 | None:intergenic |
| TTTAATTGGGGAGAAGAGAA+GGG | 0.544198 | 1_2:+78157832 | Msa0094800:three_prime_UTR |
| CATCTCCTCTCCATTTCCGC+CGG | 0.544957 | 1_2:+78149157 | Msa0094800:CDS |
| GCCAATTGCTGCCTGATCCA+CGG | 0.545947 | 1_2:-78154828 | None:intergenic |
| GGTTGAAGAATATGAAGAAA+CGG | 0.547124 | 1_2:+78157100 | Msa0094800:CDS |
| GGTGGAGGTGTGAACGTTGG+TGG | 0.547293 | 1_2:-78149092 | None:intergenic |
| AACTCCTTGCTAACATTCGA+AGG | 0.548924 | 1_2:-78149350 | None:intergenic |
| GTTTCAGTCTAACGTATTGG+CGG | 0.549607 | 1_2:-78148964 | None:intergenic |
| TTCAATTAACACAGGGATGG+AGG | 0.549854 | 1_2:+78151914 | Msa0094800:intron |
| TCAGTTTATTATTGAAGAGG+GGG | 0.549867 | 1_2:+78157173 | Msa0094800:CDS |
| TCGATGGTTCAAACTCTACA+TGG | 0.550475 | 1_2:+78149632 | Msa0094800:CDS |
| GGATGAAATTTGTGGATGGA+GGG | 0.551554 | 1_2:+78152232 | Msa0094800:intron |
| AAAGCTGGGGCATTGGAAGA+TGG | 0.553037 | 1_2:+78157149 | Msa0094800:CDS |
| CTGTCGTGCTATCTGTTGAT+GGG | 0.553051 | 1_2:+78155542 | Msa0094800:CDS |
| AAAAGTGCAGTAAACTTGCT+TGG | 0.553241 | 1_2:+78152275 | Msa0094800:CDS |
| ACAAGAGATGGGACGATGTG+TGG | 0.553250 | 1_2:-78153862 | None:intergenic |
| TTCAGTTTATTATTGAAGAG+GGG | 0.553533 | 1_2:+78157172 | Msa0094800:CDS |
| CTTCCCTCGTCACACGGCAT+AGG | 0.554422 | 1_2:+78151247 | Msa0094800:CDS |
| TGAGACATGTTGGAATCAGA+AGG | 0.558531 | 1_2:-78152523 | None:intergenic |
| TGTGCGGGTTTCTGCTGCTG+GGG | 0.558804 | 1_2:+78153589 | Msa0094800:CDS |
| CATGTTCATACTATATCTGA+AGG | 0.559424 | 1_2:-78152150 | None:intergenic |
| AGTCTAACGTATTGGCGGGA+AGG | 0.559478 | 1_2:-78148959 | None:intergenic |
| CTGCAATAGGTTGTTGAGCG+TGG | 0.561240 | 1_2:+78154713 | Msa0094800:intron |
| CAGAATAGTCATCTTATCGA+TGG | 0.563352 | 1_2:+78149616 | Msa0094800:CDS |
| AGAAGAGGCTGAAGATGATG+AGG | 0.563759 | 1_2:+78156872 | Msa0094800:CDS |
| ATACTTCTTGTTATCCTGTG+CGG | 0.565303 | 1_2:+78153573 | Msa0094800:CDS |
| GTCAGACATGGGAAGACTCT+AGG | 0.566775 | 1_2:+78154759 | Msa0094800:CDS |
| TTGATGAAATACACCAAGCA+AGG | 0.568054 | 1_2:-78150169 | None:intergenic |
| TACCATCATGTGCTTATACA+AGG | 0.568163 | 1_2:+78157573 | Msa0094800:CDS |
| TCCCAAAGTTCCGAAGGAGC+CGG | 0.568551 | 1_2:+78150104 | Msa0094800:CDS |
| GGTTCAGTTTATTATTGAAG+AGG | 0.572469 | 1_2:+78157170 | Msa0094800:CDS |
| GGCGGTGGAGGTGTGAACGT+TGG | 0.576113 | 1_2:-78149095 | None:intergenic |
| TGATTGCAGAGTGGCATGCA+TGG | 0.578337 | 1_2:+78155620 | Msa0094800:CDS |
| AGAGGCTTCCAAAGGGAACT+GGG | 0.578676 | 1_2:-78155970 | None:intergenic |
| TGCTCTGTCATGGTTCGCTA+CGG | 0.578713 | 1_2:-78150285 | None:intergenic |
| AAACTCATGACGAGCTGCGA+CGG | 0.579274 | 1_2:-78157606 | None:intergenic |
| TCAATGGAAGTCTCCATTGG+TGG | 0.580383 | 1_2:-78152394 | None:intergenic |
| ATGGAAAAGGGTGAAGATGG+AGG | 0.581403 | 1_2:+78156048 | Msa0094800:CDS |
| AGAATCCTCTCTAAAAGGAA+AGG | 0.581742 | 1_2:-78151727 | None:intergenic |
| GAAATGGAGAGGAGATGGAA+AGG | 0.583102 | 1_2:-78149151 | None:intergenic |
| CTTGCTAACATTCGAAGGTG+TGG | 0.583712 | 1_2:-78149345 | None:intergenic |
| GTTTCCTATGCCGTGTGACG+AGG | 0.585976 | 1_2:-78151251 | None:intergenic |
| AGACTGAACCCACAAGAGAT+GGG | 0.586000 | 1_2:-78153873 | None:intergenic |
| TTCAGGATGAAATTTGTGGA+TGG | 0.586043 | 1_2:+78152228 | Msa0094800:intron |
| AGTGAGGAGCGACGGAGAGA+CGG | 0.586825 | 1_2:-78149126 | None:intergenic |
| TTTGAATCCCAAAGTTCCGA+AGG | 0.587938 | 1_2:+78150098 | Msa0094800:CDS |
| CCAGCAGCAGAAACCCGCAC+AGG | 0.588649 | 1_2:-78153587 | None:intergenic |
| CTGCTTCACTTCACTAATGG+AGG | 0.589139 | 1_2:+78156806 | Msa0094800:CDS |
| CTGTCAATGGAAGTCTCCAT+TGG | 0.590095 | 1_2:-78152397 | None:intergenic |
| GAAAGGGAAGTGAGGAGCGA+CGG | 0.593521 | 1_2:-78149134 | None:intergenic |
| CAAGAGATGGGACGATGTGT+GGG | 0.595039 | 1_2:-78153861 | None:intergenic |
| ATGTTGGAATCAGAAGGAAT+GGG | 0.596110 | 1_2:-78152517 | None:intergenic |
| CAAGCAATAGAGGCTTCCAA+AGG | 0.597557 | 1_2:-78155978 | None:intergenic |
| AAGCAATAGAGGCTTCCAAA+GGG | 0.601007 | 1_2:-78155977 | None:intergenic |
| ACATACTCAATTGAAACTGA+AGG | 0.601068 | 1_2:+78155877 | Msa0094800:CDS |
| GTCCTTGTATAAGCACATGA+TGG | 0.601157 | 1_2:-78157575 | None:intergenic |
| CATATATGGCAGTTACTTTG+GGG | 0.601229 | 1_2:+78153095 | Msa0094800:intron |
| CTAACTATTACTTGGAGAAG+GGG | 0.602486 | 1_2:-78153745 | None:intergenic |
| CATGTGCTTATACAAGGACA+AGG | 0.603007 | 1_2:+78157579 | Msa0094800:CDS |
| CAACCAGCGCCGTTCTATGG+GGG | 0.607565 | 1_2:+78152462 | Msa0094800:CDS |
| GGGGTACTGATGGCATATGG+TGG | 0.607880 | 1_2:+78153114 | Msa0094800:CDS |
| GGCAGTTATGGGTCAGACAT+GGG | 0.608317 | 1_2:+78154748 | Msa0094800:CDS |
| GAGAAGGGGTAGAAAATCAG+GGG | 0.609077 | 1_2:-78153731 | None:intergenic |
| GGAGAAGGGGTAGAAAATCA+GGG | 0.613689 | 1_2:-78153732 | None:intergenic |
| TAACAATGCTCATTCGAACA+CGG | 0.614541 | 1_2:+78153265 | Msa0094800:CDS |
| GAACCATGACAGAGCAGACA+TGG | 0.616303 | 1_2:+78150292 | Msa0094800:CDS |
| AGCTAGAGTTGATGGCATGT+AGG | 0.616932 | 1_2:-78151094 | None:intergenic |
| TTTCCTATGCCGTGTGACGA+GGG | 0.617633 | 1_2:-78151250 | None:intergenic |
| CAAGCTCTATATGTGGCAGA+AGG | 0.617895 | 1_2:-78155823 | None:intergenic |
| CGCCGGTGATATCAACATTG+CGG | 0.619290 | 1_2:-78149322 | None:intergenic |
| ATCTCCGCCATGGAAATTCG+CGG | 0.620073 | 1_2:-78149025 | None:intergenic |
| TTGGACAATGTAGTAATGCA+TGG | 0.621160 | 1_2:-78155855 | None:intergenic |
| CACACCTTCGAATGTTAGCA+AGG | 0.623375 | 1_2:+78149346 | Msa0094800:CDS |
| CCCAGTTTGCGCTAGCAATG+AGG | 0.625087 | 1_2:-78153326 | None:intergenic |
| GTGTGGTACAGAAACAGCTA+TGG | 0.626514 | 1_2:-78153304 | None:intergenic |
| TTGGATACGAGCTCCAATTG+GGG | 0.629397 | 1_2:-78150132 | None:intergenic |
| ATTGAACGTTCAGGCACAGG+TGG | 0.629530 | 1_2:-78155754 | None:intergenic |
| ACATGAGCAAGCTCTATATG+TGG | 0.630767 | 1_2:-78155830 | None:intergenic |
| GATTGCAGAGTGGCATGCAT+GGG | 0.631699 | 1_2:+78155621 | Msa0094800:CDS |
| AATTACCGGCGGAAATGGAG+AGG | 0.633426 | 1_2:-78149162 | None:intergenic |
| CTACTAAACGAATTCAGTAG+AGG | 0.633526 | 1_2:-78151117 | None:intergenic |
| ACTATGTTTCACAAAATCCA+CGG | 0.637699 | 1_2:-78149554 | None:intergenic |
| GCTAACACCGTTATCCACAC+AGG | 0.637921 | 1_2:+78154883 | Msa0094800:CDS |
| TGTGAACGTTGGTGGCGTCG+GGG | 0.637949 | 1_2:-78149084 | None:intergenic |
| GATACGAGCTCCAATTGGGG+TGG | 0.640240 | 1_2:-78150129 | None:intergenic |
| GCAACCAGCGCCGTTCTATG+GGG | 0.641275 | 1_2:+78152461 | Msa0094800:CDS |
| ATATAAACCACACCCAGGGA+AGG | 0.642312 | 1_2:-78157637 | None:intergenic |
| TTGTTTAAATTAGGACTCGG+AGG | 0.646414 | 1_2:+78157079 | Msa0094800:intron |
| TGATGAAATACACCAAGCAA+GGG | 0.657773 | 1_2:-78150168 | None:intergenic |
| TGGAAATATAAACCACACCC+AGG | 0.658235 | 1_2:-78157642 | None:intergenic |
| GGCGCTCAAACTAACCTGTG+TGG | 0.662812 | 1_2:-78154897 | None:intergenic |
| AGCATTGGTAATGAATGAGA+AGG | 0.663030 | 1_2:+78151984 | Msa0094800:CDS |
| GATGAGAGTAATCTCCGCCA+TGG | 0.663669 | 1_2:-78149035 | None:intergenic |
| TTGAATCAAGGGAAGTCATG+TGG | 0.667733 | 1_2:+78156768 | Msa0094800:CDS |
| GGAGAGACGGTCGAGCTCGG+CGG | 0.677569 | 1_2:-78149113 | None:intergenic |
| GGCATATGGTGGTCTGCAAG+AGG | 0.685318 | 1_2:+78153125 | Msa0094800:CDS |
| GGAAATATAAACCACACCCA+GGG | 0.689031 | 1_2:-78157641 | None:intergenic |
| TGACTCTGAAGATTACGATG+AGG | 0.694385 | 1_2:+78156914 | Msa0094800:CDS |
| ACTAGGCTCCTGTCTACCAG+AGG | 0.694654 | 1_2:+78153359 | Msa0094800:CDS |
| GAAACAGCTATGGTATACAG+TGG | 0.713847 | 1_2:-78153294 | None:intergenic |
| TTTGCGCTAGCAATGAGGTG+TGG | 0.715406 | 1_2:-78153321 | None:intergenic |
| GTAGGCATTTGCATATTGTG+AGG | 0.716268 | 1_2:-78150331 | None:intergenic |
| TGATAGGTATGCTAAAGCTG+GGG | 0.717043 | 1_2:+78157136 | Msa0094800:CDS |
| GGTCTGCAATGATTGCAGAG+TGG | 0.763171 | 1_2:+78155611 | Msa0094800:CDS |
| AGAAGGGGTAGAAAATCAGG+GGG | 0.766386 | 1_2:-78153730 | None:intergenic |
| AACACCGCGAATTTCCATGG+CGG | 0.788061 | 1_2:+78149021 | Msa0094800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAATTTATTTTTTTAAT+TGG | + | chr1_2:78157818-78157837 | Msa0094800:three_prime_UTR | 0.0% |
| !!! | ATTAATTTATTTTTTTAATT+GGG | + | chr1_2:78157819-78157838 | Msa0094800:three_prime_UTR | 0.0% |
| !!! | TTATTATTTCTAATTTTAGT+TGG | + | chr1_2:78149462-78149481 | Msa0094800:intron | 10.0% |
| !! | AATAATTGAATAATATTGTT+TGG | - | chr1_2:78150407-78150426 | None:intergenic | 10.0% |
| !! | TTAATTGCAAAAAAAAAATT+TGG | + | chr1_2:78152605-78152624 | Msa0094800:intron | 10.0% |
| !!! | AAAAAATTTGGATTTTTTTA+AGG | + | chr1_2:78152617-78152636 | Msa0094800:intron | 10.0% |
| !!! | AACAAATAAAAAAATTTGTT+TGG | + | chr1_2:78156288-78156307 | Msa0094800:intron | 10.0% |
| !!! | TGTGTTTTTAATTTATTTAT+TGG | + | chr1_2:78156702-78156721 | Msa0094800:intron | 10.0% |
| !!! | GTGTTTTTAATTTATTTATT+GGG | + | chr1_2:78156703-78156722 | Msa0094800:intron | 10.0% |
| !! | CAAAAACTCAAAAAAAAAAA+GGG | - | chr1_2:78150560-78150579 | None:intergenic | 15.0% |
| !! | TTTCATCTACATATAATTTA+AGG | - | chr1_2:78150806-78150825 | None:intergenic | 15.0% |
| !! | TAAAATTTAAGTAACTTACA+GGG | - | chr1_2:78151795-78151814 | None:intergenic | 15.0% |
| !! | ATAAAATTTAAGTAACTTAC+AGG | - | chr1_2:78151796-78151815 | None:intergenic | 15.0% |
| !! | TAAAAAATGAACAAAGAAAT+TGG | - | chr1_2:78152679-78152698 | None:intergenic | 15.0% |
| !! | TAAATTCAATTGACTAAATA+GGG | - | chr1_2:78152787-78152806 | None:intergenic | 15.0% |
| !! | ATAAATTCAATTGACTAAAT+AGG | - | chr1_2:78152788-78152807 | None:intergenic | 15.0% |
| !! | TGATTAGTAATAATTTATAC+TGG | + | chr1_2:78153960-78153979 | Msa0094800:intron | 15.0% |
| !!! | TAATTATTTGCCTTTAATTT+AGG | + | chr1_2:78155112-78155131 | Msa0094800:intron | 15.0% |
| !!! | ATTTTGTGAAACATAGTTTA+TGG | + | chr1_2:78149560-78149579 | Msa0094800:CDS | 20.0% |
| !! | GCAAAAACTCAAAAAAAAAA+AGG | - | chr1_2:78150561-78150580 | None:intergenic | 20.0% |
| !!! | GAAAGATGATTTTTAAACTA+TGG | + | chr1_2:78150615-78150634 | Msa0094800:intron | 20.0% |
| !!! | ATTTGTTAGAGAAAAGAAAA+CGG | - | chr1_2:78150726-78150745 | None:intergenic | 20.0% |
| !! | TTAAAAAACGTCATTAGTAA+TGG | - | chr1_2:78151036-78151055 | None:intergenic | 20.0% |
| !! | AAGTATATTCGTTTGAATTT+CGG | - | chr1_2:78151522-78151541 | None:intergenic | 20.0% |
| !!! | ACTTGTATTAATTTTCTACA+CGG | + | chr1_2:78151582-78151601 | Msa0094800:intron | 20.0% |
| !!! | GTTATTTTTCAATTAACACA+GGG | + | chr1_2:78151907-78151926 | Msa0094800:intron | 20.0% |
| !!! | TTTTTTGCAATTAATTGATC+AGG | - | chr1_2:78152599-78152618 | None:intergenic | 20.0% |
| !!! | AACTGATTCAAAAACATATA+GGG | - | chr1_2:78152747-78152766 | None:intergenic | 20.0% |
| !!! | AAACTGATTCAAAAACATAT+AGG | - | chr1_2:78152748-78152767 | None:intergenic | 20.0% |
| !! | AACTAATATATACAGGAATA+AGG | - | chr1_2:78153023-78153042 | None:intergenic | 20.0% |
| !! | TCAACTAAACTAATATATAC+AGG | - | chr1_2:78153030-78153049 | None:intergenic | 20.0% |
| !! | ATTAAGATAGAGATATAACA+TGG | - | chr1_2:78154388-78154407 | None:intergenic | 20.0% |
| !! | TATATCTCTATCTTAATAAG+TGG | + | chr1_2:78154391-78154410 | Msa0094800:intron | 20.0% |
| !! | AAATTCCAAAATAATGTAGA+AGG | + | chr1_2:78154506-78154525 | Msa0094800:intron | 20.0% |
| !!! | AAATGATTTGCAAGAAAAAT+GGG | + | chr1_2:78154805-78154824 | Msa0094800:CDS | 20.0% |
| !! | AATCAAATTTCAAATTAGCA+AGG | - | chr1_2:78154921-78154940 | None:intergenic | 20.0% |
| !!! | ATTTGATTTTCTTAAGAGTT+CGG | + | chr1_2:78154933-78154952 | Msa0094800:intron | 20.0% |
| !! | ATAATGTATGCCTAAATTAA+AGG | - | chr1_2:78155125-78155144 | None:intergenic | 20.0% |
| !! | TTACAATTATTAGAATAGAC+AGG | - | chr1_2:78155401-78155420 | None:intergenic | 20.0% |
| !! | AAAGAAATTGTGAATTTAGA+TGG | + | chr1_2:78155679-78155698 | Msa0094800:CDS | 20.0% |
| !!! | AAAACAGTTTTTCTGAATAT+TGG | + | chr1_2:78156412-78156431 | Msa0094800:intron | 20.0% |
| !! | AAGTACCAAATAACAAAAAT+AGG | - | chr1_2:78157243-78157262 | None:intergenic | 20.0% |
| !!! | CAATTTTATTAGTTGTATCT+TGG | + | chr1_2:78157267-78157286 | Msa0094800:intron | 20.0% |
| !!! | AGCAGGTATTTTTTTTTTTT+GGG | + | chr1_2:78157763-78157782 | Msa0094800:three_prime_UTR | 20.0% |
| ! | GTAGTTAGAGAAAAATGAAT+CGG | - | chr1_2:78149212-78149231 | None:intergenic | 25.0% |
| ! | TCAACTAAAATCTTGAGAAT+AGG | - | chr1_2:78149416-78149435 | None:intergenic | 25.0% |
| !!! | TGAATTTTGATTACCTGAAA+GGG | - | chr1_2:78149700-78149719 | None:intergenic | 25.0% |
| ! | AATCTTCGAATACTATAGTA+AGG | + | chr1_2:78149832-78149851 | Msa0094800:intron | 25.0% |
| ! | TGTTGTTATAGAGATCATAA+TGG | + | chr1_2:78150030-78150049 | Msa0094800:intron | 25.0% |
| ! | GTTGTTATAGAGATCATAAT+GGG | + | chr1_2:78150031-78150050 | Msa0094800:intron | 25.0% |
| ! | TTGTTATAGAGATCATAATG+GGG | + | chr1_2:78150032-78150051 | Msa0094800:intron | 25.0% |
| !! | AGAAGTGCATTTAAGATAAA+AGG | - | chr1_2:78150065-78150084 | None:intergenic | 25.0% |
| !!! | ATTTCATCAATTTGTTGGAA+AGG | + | chr1_2:78150182-78150201 | Msa0094800:CDS | 25.0% |
| !!! | GGTACTGTGTTTTTTTTTTT+TGG | + | chr1_2:78150203-78150222 | Msa0094800:intron | 25.0% |
| !! | TTATTATGTGTTATTGAGCT+AGG | - | chr1_2:78150702-78150721 | None:intergenic | 25.0% |
| ! | ATATGTAGATGAAATTGAGA+TGG | + | chr1_2:78150812-78150831 | Msa0094800:intron | 25.0% |
| ! | AATACCAAAAGTGGAATAAA+AGG | - | chr1_2:78150938-78150957 | None:intergenic | 25.0% |
| ! | AAGATGTATATTTGACTAGA+TGG | + | chr1_2:78151193-78151212 | Msa0094800:CDS | 25.0% |
| ! | AGAGCACAATTTATAATATC+TGG | - | chr1_2:78151378-78151397 | None:intergenic | 25.0% |
| ! | TTAAGAATATTATCTTACGC+TGG | - | chr1_2:78151427-78151446 | None:intergenic | 25.0% |
| ! | AAGTGGTTAGCAAATAAAAA+TGG | - | chr1_2:78151566-78151585 | None:intergenic | 25.0% |
| ! | GTGTAGAAAATTAATACAAG+TGG | - | chr1_2:78151583-78151602 | None:intergenic | 25.0% |
| ! | TGAAATTACATCAAAACCTA+GGG | - | chr1_2:78151755-78151774 | None:intergenic | 25.0% |
| ! | TTGAAATTACATCAAAACCT+AGG | - | chr1_2:78151756-78151775 | None:intergenic | 25.0% |
| ! | TAATTACAGTTTCAATTGCA+AGG | + | chr1_2:78151834-78151853 | Msa0094800:intron | 25.0% |
| !!! | CGTTATTTTTCAATTAACAC+AGG | + | chr1_2:78151906-78151925 | Msa0094800:intron | 25.0% |
| !!! | TTTTATTTCGTAGAAGTAAC+AGG | + | chr1_2:78152012-78152031 | Msa0094800:intron | 25.0% |
| ! | TTTATTTCGTAGAAGTAACA+GGG | + | chr1_2:78152013-78152032 | Msa0094800:intron | 25.0% |
| !!! | CTTTTGGAAATGTAATGTAT+AGG | + | chr1_2:78152077-78152096 | Msa0094800:intron | 25.0% |
| ! | TATATTCAGGATGAAATTTG+TGG | + | chr1_2:78152224-78152243 | Msa0094800:intron | 25.0% |
| !! | ATGTGGTCATTAATTTTTGT+AGG | + | chr1_2:78152369-78152388 | Msa0094800:intron | 25.0% |
| !! | TGTGGTCATTAATTTTTGTA+GGG | + | chr1_2:78152370-78152389 | Msa0094800:intron | 25.0% |
| ! | ATGGGAAATTTAGACAAAAA+AGG | - | chr1_2:78152502-78152521 | None:intergenic | 25.0% |
| ! | ACATAAAAACTCACTCATTT+AGG | - | chr1_2:78152558-78152577 | None:intergenic | 25.0% |
| ! | GATATATATAGGCATCAAAT+GGG | - | chr1_2:78152827-78152846 | None:intergenic | 25.0% |
| ! | AGATATATATAGGCATCAAA+TGG | - | chr1_2:78152828-78152847 | None:intergenic | 25.0% |
| ! | AAGAAAAGCAGAAAATGAAA+AGG | - | chr1_2:78152953-78152972 | None:intergenic | 25.0% |
| ! | ATGATACTAACATTAAGTAC+AGG | - | chr1_2:78152987-78153006 | None:intergenic | 25.0% |
| !! | ATGATGATGTAACAAGAATA+AGG | - | chr1_2:78153078-78153097 | None:intergenic | 25.0% |
| ! | TCTTGTTACATCATCATATA+TGG | + | chr1_2:78153081-78153100 | Msa0094800:intron | 25.0% |
| !! | GTTTTACCTTTTGTTGAAAA+AGG | + | chr1_2:78153155-78153174 | Msa0094800:intron | 25.0% |
| !!! | TTTTTGAAAGATCAAGAATC+TGG | + | chr1_2:78153237-78153256 | Msa0094800:CDS | 25.0% |
| !!! | CAAGCAAATTTTGTTTGATA+TGG | + | chr1_2:78153412-78153431 | Msa0094800:intron | 25.0% |
| ! | TGTATATTCTCAATTGCTTA+TGG | + | chr1_2:78153526-78153545 | Msa0094800:CDS | 25.0% |
| ! | GGATGTTTCATAAAAATCAT+TGG | + | chr1_2:78153981-78154000 | Msa0094800:intron | 25.0% |
| ! | AATAGGGATTTGAGTATTAT+GGG | - | chr1_2:78154104-78154123 | None:intergenic | 25.0% |
| ! | TAATAGGGATTTGAGTATTA+TGG | - | chr1_2:78154105-78154124 | None:intergenic | 25.0% |
| ! | AATTGTCCAAACTACTATAT+TGG | - | chr1_2:78154420-78154439 | None:intergenic | 25.0% |
| !! | TTGGAGGTGTAAATAAAAAA+AGG | - | chr1_2:78154461-78154480 | None:intergenic | 25.0% |
| !! | CAAATGATTTGCAAGAAAAA+TGG | + | chr1_2:78154804-78154823 | Msa0094800:CDS | 25.0% |
| !!! | TTTGATTTTCTTAAGAGTTC+GGG | + | chr1_2:78154934-78154953 | Msa0094800:intron | 25.0% |
| ! | GTTAAAGCAATTTATTGTCA+AGG | - | chr1_2:78155074-78155093 | None:intergenic | 25.0% |
| ! | ATTTATAGATCCTATGAGTA+TGG | + | chr1_2:78155278-78155297 | Msa0094800:intron | 25.0% |
| ! | TTTATAGATCCTATGAGTAT+GGG | + | chr1_2:78155279-78155298 | Msa0094800:intron | 25.0% |
| ! | GTGTTCTTCTGAATTTAATA+AGG | + | chr1_2:78155456-78155475 | Msa0094800:intron | 25.0% |
| ! | AAGATTTGTCAACTTTGTTA+CGG | + | chr1_2:78155518-78155537 | Msa0094800:CDS | 25.0% |
| ! | ATTATACCTTCTACAATTTC+AGG | - | chr1_2:78156030-78156049 | None:intergenic | 25.0% |
| !! | TGAAATTGTAGAAGGTATAA+TGG | + | chr1_2:78156029-78156048 | Msa0094800:CDS | 25.0% |
| ! | AACCAAAAACTAATTCAAAC+AGG | - | chr1_2:78156214-78156233 | None:intergenic | 25.0% |
| ! | AAGAATATCAGAGGTTTAAA+TGG | - | chr1_2:78156527-78156546 | None:intergenic | 25.0% |
| ! | GTTAAAACATCAACTATGTA+CGG | - | chr1_2:78156649-78156668 | None:intergenic | 25.0% |
| ! | TTGTAATTCTTTCAACTGAA+TGG | - | chr1_2:78156835-78156854 | None:intergenic | 25.0% |
| ! | AAAGAATTACAAGATGAGAA+AGG | + | chr1_2:78156843-78156862 | Msa0094800:CDS | 25.0% |
| ! | GTTCAGTTTATTATTGAAGA+GGG | + | chr1_2:78157171-78157190 | Msa0094800:CDS | 25.0% |
| ! | TTCAGTTTATTATTGAAGAG+GGG | + | chr1_2:78157172-78157191 | Msa0094800:CDS | 25.0% |
| ! | CAAATAACAAAAATAGGAGA+AGG | - | chr1_2:78157237-78157256 | None:intergenic | 25.0% |
| !!! | CTTCTCCTATTTTTGTTATT+TGG | + | chr1_2:78157235-78157254 | Msa0094800:intron | 25.0% |
| ! | TTATTAGTTGTATCTTGGTT+CGG | + | chr1_2:78157272-78157291 | Msa0094800:intron | 25.0% |
| ! | ATTATTCACTCGAAATATCA+GGG | + | chr1_2:78157719-78157738 | Msa0094800:three_prime_UTR | 25.0% |
| !!! | GAGCAGGTATTTTTTTTTTT+TGG | + | chr1_2:78157762-78157781 | Msa0094800:three_prime_UTR | 25.0% |
| !!! | GCAGGTATTTTTTTTTTTTG+GGG | + | chr1_2:78157764-78157783 | Msa0094800:three_prime_UTR | 25.0% |
| !!! | CAGGTATTTTTTTTTTTTGG+GGG | + | chr1_2:78157765-78157784 | Msa0094800:three_prime_UTR | 25.0% |
| !!! | AGGTATTTTTTTTTTTTGGG+GGG | + | chr1_2:78157766-78157785 | Msa0094800:three_prime_UTR | 25.0% |
| AATACGTTAGACTGAAACTA+GGG | + | chr1_2:78148969-78148988 | Msa0094800:CDS | 30.0% | |
| !!! | TCTCAAGATTTTAGTTGAAG+TGG | + | chr1_2:78149418-78149437 | Msa0094800:CDS | 30.0% |
| ACTATGTTTCACAAAATCCA+CGG | - | chr1_2:78149557-78149576 | None:intergenic | 30.0% | |
| AAGAACAATAAGTGCATTGA+TGG | - | chr1_2:78149662-78149681 | None:intergenic | 30.0% | |
| !!! | GTGAATTTTGATTACCTGAA+AGG | - | chr1_2:78149701-78149720 | None:intergenic | 30.0% |
| AGGTAATCAAAATTCACAGT+CGG | + | chr1_2:78149704-78149723 | Msa0094800:intron | 30.0% | |
| !! | AGTTCTAGAGATTAATGAGT+TGG | + | chr1_2:78149923-78149942 | Msa0094800:intron | 30.0% |
| ! | TAATGAGTTGGATCGAAATT+TGG | + | chr1_2:78149935-78149954 | Msa0094800:intron | 30.0% |
| GGTGTATTTCATCAATTTGT+TGG | + | chr1_2:78150177-78150196 | Msa0094800:CDS | 30.0% | |
| ! | TTTTGCTCATCAGCTTAAAT+TGG | + | chr1_2:78150505-78150524 | Msa0094800:intron | 30.0% |
| TGACCATTTATGATTAGAAC+AGG | + | chr1_2:78150840-78150859 | Msa0094800:intron | 30.0% | |
| GACCATTTATGATTAGAACA+GGG | + | chr1_2:78150841-78150860 | Msa0094800:intron | 30.0% | |
| ACAACAATAAGAAATCACCA+AGG | - | chr1_2:78150888-78150907 | None:intergenic | 30.0% | |
| AAAAGGTTACACTATCTGAA+AGG | - | chr1_2:78150921-78150940 | None:intergenic | 30.0% | |
| ! | GTAACCTTTTATTCCACTTT+TGG | + | chr1_2:78150931-78150950 | Msa0094800:intron | 30.0% |
| CATGAACTAAATACCAAAAG+TGG | - | chr1_2:78150947-78150966 | None:intergenic | 30.0% | |
| ATAAAGACCATAAACTCAGA+TGG | - | chr1_2:78150994-78151013 | None:intergenic | 30.0% | |
| TCTACTGAATTCGTTTAGTA+GGG | + | chr1_2:78151119-78151138 | Msa0094800:CDS | 30.0% | |
| !! | CTTAATAACCGATTTGTTGT+TGG | + | chr1_2:78151454-78151473 | Msa0094800:intron | 30.0% |
| TATTCAAGCCAACAACAAAT+CGG | - | chr1_2:78151465-78151484 | None:intergenic | 30.0% | |
| !! | TTTGTTGTTGGCTTGAATAA+TGG | + | chr1_2:78151466-78151485 | Msa0094800:intron | 30.0% |
| TGATGTAATTTCAAATGTGC+TGG | + | chr1_2:78151762-78151781 | Msa0094800:CDS | 30.0% | |
| !! | TTTTTCAATTAACACAGGGA+TGG | + | chr1_2:78151911-78151930 | Msa0094800:intron | 30.0% |
| ! | TCCACATTTTACAACTCTAT+TGG | + | chr1_2:78151945-78151964 | Msa0094800:CDS | 30.0% |
| TCCAATAGAGTTGTAAAATG+TGG | - | chr1_2:78151949-78151968 | None:intergenic | 30.0% | |
| CAAAAGACATTAATGAGAAC+GGG | - | chr1_2:78152063-78152082 | None:intergenic | 30.0% | |
| CCAAAAGACATTAATGAGAA+CGG | - | chr1_2:78152064-78152083 | None:intergenic | 30.0% | |
| AAGATGCTGATGAGTATATA+CGG | + | chr1_2:78152118-78152137 | Msa0094800:CDS | 30.0% | |
| CATGTTCATACTATATCTGA+AGG | - | chr1_2:78152153-78152172 | None:intergenic | 30.0% | |
| AAATTGTAGTGATTTCTGAC+TGG | + | chr1_2:78152196-78152215 | Msa0094800:intron | 30.0% | |
| ! | CTGACTGGAATTTTATATTC+AGG | + | chr1_2:78152211-78152230 | Msa0094800:intron | 30.0% |
| !! | TGGTGTTATTTCAATGTCAA+AGG | + | chr1_2:78152295-78152314 | Msa0094800:CDS | 30.0% |
| ! | GTGGTCATTAATTTTTGTAG+GGG | + | chr1_2:78152371-78152390 | Msa0094800:intron | 30.0% |
| TTTATCAGCCAAACGTAAAA+AGG | + | chr1_2:78152420-78152439 | Msa0094800:CDS | 30.0% | |
| TTATCAGCCAAACGTAAAAA+GGG | + | chr1_2:78152421-78152440 | Msa0094800:CDS | 30.0% | |
| TGATGCCTATATATATCTTG+CGG | + | chr1_2:78152830-78152849 | Msa0094800:intron | 30.0% | |
| ! | TTTAAAGTGTTCCTGATTGA+AGG | + | chr1_2:78152877-78152896 | Msa0094800:intron | 30.0% |
| ! | TTAAAGTGTTCCTGATTGAA+GGG | + | chr1_2:78152878-78152897 | Msa0094800:intron | 30.0% |
| ATACTAACATTAAGTACAGG+AGG | - | chr1_2:78152984-78153003 | None:intergenic | 30.0% | |
| ATCATATATGGCAGTTACTT+TGG | + | chr1_2:78153093-78153112 | Msa0094800:intron | 30.0% | |
| ! | TCATATATGGCAGTTACTTT+GGG | + | chr1_2:78153094-78153113 | Msa0094800:intron | 30.0% |
| !!! | CTTAAGCCTTTTTCAACAAA+AGG | - | chr1_2:78153164-78153183 | None:intergenic | 30.0% |
| GTGATATAATCGTGAAAACT+TGG | + | chr1_2:78153463-78153482 | Msa0094800:intron | 30.0% | |
| ACGTTCTATTGACAAAATCA+GGG | - | chr1_2:78153649-78153668 | None:intergenic | 30.0% | |
| AACGTTCTATTGACAAAATC+AGG | - | chr1_2:78153650-78153669 | None:intergenic | 30.0% | |
| CAATGTTGCTAACTATTACT+TGG | - | chr1_2:78153756-78153775 | None:intergenic | 30.0% | |
| CAAGTAATAGTTAGCAACAT+TGG | + | chr1_2:78153754-78153773 | Msa0094800:CDS | 30.0% | |
| TTTAAAAGCTAGCTGTCAAA+GGG | + | chr1_2:78154014-78154033 | Msa0094800:intron | 30.0% | |
| GTCAAGTAGTATGAGATATT+TGG | - | chr1_2:78154067-78154086 | None:intergenic | 30.0% | |
| ! | CACTAAACCTTTATTTGAGT+CGG | + | chr1_2:78154176-78154195 | Msa0094800:intron | 30.0% |
| TTATCAAATATTACCAGAGC+TGG | - | chr1_2:78154241-78154260 | None:intergenic | 30.0% | |
| ! | ATTACAAGGTATTACAGACT+GGG | - | chr1_2:78154357-78154376 | None:intergenic | 30.0% |
| ! | TATTACAAGGTATTACAGAC+TGG | - | chr1_2:78154358-78154377 | None:intergenic | 30.0% |
| TAGAGATATAACATGGAACT+GGG | - | chr1_2:78154381-78154400 | None:intergenic | 30.0% | |
| ATAGAGATATAACATGGAAC+TGG | - | chr1_2:78154382-78154401 | None:intergenic | 30.0% | |
| TGGTTTCCAATATAGTAGTT+TGG | + | chr1_2:78154411-78154430 | Msa0094800:intron | 30.0% | |
| AGGCATACATTATTGTTAGA+AGG | + | chr1_2:78155132-78155151 | Msa0094800:intron | 30.0% | |
| ! | TTTTCTACATTCATCAATGG+TGG | - | chr1_2:78155163-78155182 | None:intergenic | 30.0% |
| ! | AGCTTTTCTACATTCATCAA+TGG | - | chr1_2:78155166-78155185 | None:intergenic | 30.0% |
| TTGAAGCAAAGTTAGTTAAG+AGG | + | chr1_2:78155185-78155204 | Msa0094800:intron | 30.0% | |
| ATGATGAATTCGGAAAATTC+TGG | - | chr1_2:78155492-78155511 | None:intergenic | 30.0% | |
| TCTTCTATGCATGATGAATT+CGG | - | chr1_2:78155502-78155521 | None:intergenic | 30.0% | |
| TCAGTTTCAATTGAGTATGT+TGG | - | chr1_2:78155877-78155896 | None:intergenic | 30.0% | |
| ACATACTCAATTGAAACTGA+AGG | + | chr1_2:78155877-78155896 | Msa0094800:CDS | 30.0% | |
| !!! | CATTGGCTATTGTTTTTAGT+CGG | + | chr1_2:78155911-78155930 | Msa0094800:CDS | 30.0% |
| !!! | ATTGGCTATTGTTTTTAGTC+GGG | + | chr1_2:78155912-78155931 | Msa0094800:CDS | 30.0% |
| ACACAAATAGCACAAAGATA+TGG | - | chr1_2:78156004-78156023 | None:intergenic | 30.0% | |
| TGTTATCCTGAAATTGTAGA+AGG | + | chr1_2:78156021-78156040 | Msa0094800:CDS | 30.0% | |
| ! | TGTAGAAGGTATAATGGAAA+AGG | + | chr1_2:78156035-78156054 | Msa0094800:CDS | 30.0% |
| ! | GTAGAAGGTATAATGGAAAA+GGG | + | chr1_2:78156036-78156055 | Msa0094800:CDS | 30.0% |
| CTTACCAATTAACTTCATCT+CGG | - | chr1_2:78156148-78156167 | None:intergenic | 30.0% | |
| !!! | AGCCTGTTTGAATTAGTTTT+TGG | + | chr1_2:78156209-78156228 | Msa0094800:intron | 30.0% |
| ! | TCTCGATTAGAATACAGTTT+TGG | + | chr1_2:78156314-78156333 | Msa0094800:intron | 30.0% |
| ATGAAATTGAGCAGGTAAAA+GGG | - | chr1_2:78156483-78156502 | None:intergenic | 30.0% | |
| AACTATAGCAAGAATATCAG+AGG | - | chr1_2:78156536-78156555 | None:intergenic | 30.0% | |
| ! | TATATCTCCTTTTGTCTACA+AGG | + | chr1_2:78156988-78157007 | Msa0094800:CDS | 30.0% |
| TTTAACAGTTCTTAATCCTG+TGG | + | chr1_2:78157054-78157073 | Msa0094800:intron | 30.0% | |
| TTAACAGTTCTTAATCCTGT+GGG | + | chr1_2:78157055-78157074 | Msa0094800:intron | 30.0% | |
| ! | GGTTTGTTTAAATTAGGACT+CGG | + | chr1_2:78157076-78157095 | Msa0094800:intron | 30.0% |
| GGTTGAAGAATATGAAGAAA+CGG | + | chr1_2:78157100-78157119 | Msa0094800:CDS | 30.0% | |
| GGTTCAGTTTATTATTGAAG+AGG | + | chr1_2:78157170-78157189 | Msa0094800:CDS | 30.0% | |
| TCAGTTTATTATTGAAGAGG+GGG | + | chr1_2:78157173-78157192 | Msa0094800:CDS | 30.0% | |
| !! | GTTCGGTGTAATTTAACTTA+AGG | + | chr1_2:78157289-78157308 | Msa0094800:intron | 30.0% |
| GCTGAGAAAATGATTATGTT+TGG | + | chr1_2:78157375-78157394 | Msa0094800:intron | 30.0% | |
| ! | TATGTTTGGATTTTCAGTTC+CGG | + | chr1_2:78157389-78157408 | Msa0094800:intron | 30.0% |
| ATGATGGTATTTGTCTATCA+AGG | - | chr1_2:78157562-78157581 | None:intergenic | 30.0% | |
| ! | AAAACAAACTTCAGTTTTGC+TGG | - | chr1_2:78157665-78157684 | None:intergenic | 30.0% |
| GATTATTCACTCGAAATATC+AGG | + | chr1_2:78157718-78157737 | Msa0094800:three_prime_UTR | 30.0% | |
| !!! | GGTTTTAAATGTTTGTTCCA+AGG | + | chr1_2:78157740-78157759 | Msa0094800:three_prime_UTR | 30.0% |
| AAAAAAAAATACCTGCTCCT+TGG | - | chr1_2:78157760-78157779 | None:intergenic | 30.0% | |
| !!! | GGTATTTTTTTTTTTTGGGG+GGG | + | chr1_2:78157767-78157786 | Msa0094800:three_prime_UTR | 30.0% |
| !!! | GTATTTTTTTTTTTTGGGGG+GGG | + | chr1_2:78157768-78157787 | Msa0094800:three_prime_UTR | 30.0% |
| CTAGTTTCAGTCTAACGTAT+TGG | - | chr1_2:78148970-78148989 | None:intergenic | 35.0% | |
| CAATACGTTAGACTGAAACT+AGG | + | chr1_2:78148968-78148987 | Msa0094800:CDS | 35.0% | |
| TGAAGAATTGGGGAAATTAC+CGG | - | chr1_2:78149179-78149198 | None:intergenic | 35.0% | |
| GTTAGAGAAAAATGAATCGG+AGG | - | chr1_2:78149209-78149228 | None:intergenic | 35.0% | |
| TCGTATTCTCAATTCTCAAC+AGG | + | chr1_2:78149242-78149261 | Msa0094800:intron | 35.0% | |
| TATTCTCAATTCTCAACAGG+AGG | + | chr1_2:78149245-78149264 | Msa0094800:intron | 35.0% | |
| GAATGTTAGCAAGGAGTTTA+AGG | + | chr1_2:78149355-78149374 | Msa0094800:CDS | 35.0% | |
| !! | TATTCTGCGATTTTTCGATG+TGG | + | chr1_2:78149512-78149531 | Msa0094800:intron | 35.0% |
| TGTGAAACATAGTTTATGGC+CGG | + | chr1_2:78149564-78149583 | Msa0094800:CDS | 35.0% | |
| TGAATAGCAGATTGCAGATT+CGG | - | chr1_2:78149598-78149617 | None:intergenic | 35.0% | |
| CAGAATAGTCATCTTATCGA+TGG | + | chr1_2:78149616-78149635 | Msa0094800:CDS | 35.0% | |
| TAATCAAAATTCACAGTCGG+TGG | + | chr1_2:78149707-78149726 | Msa0094800:intron | 35.0% | |
| AAGGAGAGTAGATCAAATTG+AGG | + | chr1_2:78149851-78149870 | Msa0094800:intron | 35.0% | |
| AGGAGAGTAGATCAAATTGA+GGG | + | chr1_2:78149852-78149871 | Msa0094800:intron | 35.0% | |
| TGATGAAATACACCAAGCAA+GGG | - | chr1_2:78150171-78150190 | None:intergenic | 35.0% | |
| TTGATGAAATACACCAAGCA+AGG | - | chr1_2:78150172-78150191 | None:intergenic | 35.0% | |
| ! | GATTTTATGATGCATGAGTC+AGG | + | chr1_2:78150262-78150281 | Msa0094800:intron | 35.0% |
| CATTACTTACTGCGAAATGT+AGG | - | chr1_2:78150352-78150371 | None:intergenic | 35.0% | |
| CTACATTTCGCAGTAAGTAA+TGG | + | chr1_2:78150350-78150369 | Msa0094800:intron | 35.0% | |
| TCCTGATGTTTATACACTTG+TGG | + | chr1_2:78150438-78150457 | Msa0094800:intron | 35.0% | |
| TCCACAAGTGTATAAACATC+AGG | - | chr1_2:78150442-78150461 | None:intergenic | 35.0% | |
| ATCTTTCAAAAGCAACTCTG+CGG | - | chr1_2:78150602-78150621 | None:intergenic | 35.0% | |
| GTAGATGAAATTGAGATGGA+AGG | + | chr1_2:78150816-78150835 | Msa0094800:intron | 35.0% | |
| GACCCTGTTCTAATCATAAA+TGG | - | chr1_2:78150846-78150865 | None:intergenic | 35.0% | |
| TTAGTTCATGAGTGTATGCA+TGG | + | chr1_2:78150957-78150976 | Msa0094800:intron | 35.0% | |
| AATCTGACATTCCTACTTAC+AGG | + | chr1_2:78151065-78151084 | Msa0094800:intron | 35.0% | |
| CTACTAAACGAATTCAGTAG+AGG | - | chr1_2:78151120-78151139 | None:intergenic | 35.0% | |
| CTCTACTGAATTCGTTTAGT+AGG | + | chr1_2:78151118-78151137 | Msa0094800:CDS | 35.0% | |
| TATTTGACTAGATGGAAGTC+TGG | + | chr1_2:78151201-78151220 | Msa0094800:CDS | 35.0% | |
| ! | AATATATCCCCTCCATTTTC+AGG | + | chr1_2:78151346-78151365 | Msa0094800:intron | 35.0% |
| !! | TGCTTGTTATTTCCAGTACT+TGG | + | chr1_2:78151492-78151511 | Msa0094800:intron | 35.0% |
| ACGAATATACTTCCTTTAGC+TGG | + | chr1_2:78151530-78151549 | Msa0094800:intron | 35.0% | |
| !! | TACTTCCTTTCCTTTTAGAG+AGG | + | chr1_2:78151722-78151741 | Msa0094800:CDS | 35.0% |
| ! | AGAATCCTCTCTAAAAGGAA+AGG | - | chr1_2:78151730-78151749 | None:intergenic | 35.0% |
| TCTCATTCATTACCAATGCT+GGG | - | chr1_2:78151984-78152003 | None:intergenic | 35.0% | |
| TTCTCATTCATTACCAATGC+TGG | - | chr1_2:78151985-78152004 | None:intergenic | 35.0% | |
| !! | AGCATTGGTAATGAATGAGA+AGG | + | chr1_2:78151984-78152003 | Msa0094800:CDS | 35.0% |
| ! | CCGTTCTCATTAATGTCTTT+TGG | + | chr1_2:78152061-78152080 | Msa0094800:intron | 35.0% |
| ATGTATAGGACATGTCAGAT+TGG | + | chr1_2:78152091-78152110 | Msa0094800:intron | 35.0% | |
| TGTATAGGACATGTCAGATT+GGG | + | chr1_2:78152092-78152111 | Msa0094800:intron | 35.0% | |
| TTCAGGATGAAATTTGTGGA+TGG | + | chr1_2:78152228-78152247 | Msa0094800:intron | 35.0% | |
| !!! | CAAGTTTACTGCACTTTTTC+TGG | - | chr1_2:78152273-78152292 | None:intergenic | 35.0% |
| ! | AAAAGTGCAGTAAACTTGCT+TGG | + | chr1_2:78152275-78152294 | Msa0094800:CDS | 35.0% |
| TGAACTACCGTAATAACCAA+GGG | - | chr1_2:78152350-78152369 | None:intergenic | 35.0% | |
| ATGAACTACCGTAATAACCA+AGG | - | chr1_2:78152351-78152370 | None:intergenic | 35.0% | |
| TTTGGCTGATAAACTGTCAA+TGG | - | chr1_2:78152413-78152432 | None:intergenic | 35.0% | |
| ! | CTTTTGACCCTTTTTACGTT+TGG | - | chr1_2:78152431-78152450 | None:intergenic | 35.0% |
| ATGTTGGAATCAGAAGGAAT+GGG | - | chr1_2:78152520-78152539 | None:intergenic | 35.0% | |
| !!! | GACTTTTTTCTGAGACATGT+TGG | - | chr1_2:78152536-78152555 | None:intergenic | 35.0% |
| TCACAATTACATTGCTAGCA+AGG | - | chr1_2:78152708-78152727 | None:intergenic | 35.0% | |
| GATCTCCGCAAGATATATAT+AGG | - | chr1_2:78152838-78152857 | None:intergenic | 35.0% | |
| ! | TAAAGTGTTCCTGATTGAAG+GGG | + | chr1_2:78152879-78152898 | Msa0094800:intron | 35.0% |
| ! | CATATATGGCAGTTACTTTG+GGG | + | chr1_2:78153095-78153114 | Msa0094800:intron | 35.0% |
| TAACAATGCTCATTCGAACA+CGG | + | chr1_2:78153265-78153284 | Msa0094800:CDS | 35.0% | |
| !! | GCTTATGGCATTGATTATAC+CGG | + | chr1_2:78153541-78153560 | Msa0094800:CDS | 35.0% |
| ATTGATTATACCGGATAAGC+AGG | + | chr1_2:78153550-78153569 | Msa0094800:CDS | 35.0% | |
| ! | ATACTTCTTGTTATCCTGTG+CGG | + | chr1_2:78153573-78153592 | Msa0094800:CDS | 35.0% |
| CTAACTATTACTTGGAGAAG+GGG | - | chr1_2:78153748-78153767 | None:intergenic | 35.0% | |
| GCTAACTATTACTTGGAGAA+GGG | - | chr1_2:78153749-78153768 | None:intergenic | 35.0% | |
| TGCTAACTATTACTTGGAGA+AGG | - | chr1_2:78153750-78153769 | None:intergenic | 35.0% | |
| AGTGAGAAGCTGAAATAAGA+TGG | - | chr1_2:78153800-78153819 | None:intergenic | 35.0% | |
| TCAGCTTCTCACTTCAATTA+TGG | + | chr1_2:78153807-78153826 | Msa0094800:CDS | 35.0% | |
| CTCACTTCAATTATGGAAGT+TGG | + | chr1_2:78153814-78153833 | Msa0094800:CDS | 35.0% | |
| TTCAATTATGGAAGTTGGAG+AGG | + | chr1_2:78153819-78153838 | Msa0094800:CDS | 35.0% | |
| !!! | GACAGCTAGCTTTTAAAGTA+GGG | - | chr1_2:78154011-78154030 | None:intergenic | 35.0% |
| !!! | TGACAGCTAGCTTTTAAAGT+AGG | - | chr1_2:78154012-78154031 | None:intergenic | 35.0% |
| ! | CTTTAAAAGCTAGCTGTCAA+AGG | + | chr1_2:78154013-78154032 | Msa0094800:intron | 35.0% |
| ATATCTCATACTACTTGACG+TGG | + | chr1_2:78154068-78154087 | Msa0094800:intron | 35.0% | |
| TATCTCATACTACTTGACGT+GGG | + | chr1_2:78154069-78154088 | Msa0094800:intron | 35.0% | |
| TTGATAAGCATTCAAGCACT+TGG | + | chr1_2:78154254-78154273 | Msa0094800:intron | 35.0% | |
| CTTTATAAGCCAGCTATCAA+GGG | + | chr1_2:78154286-78154305 | Msa0094800:intron | 35.0% | |
| ! | GGCAACCTTCTACATTATTT+TGG | - | chr1_2:78154514-78154533 | None:intergenic | 35.0% |
| ! | GACCTTGAGCACATTATTTT+TGG | + | chr1_2:78154542-78154561 | Msa0094800:intron | 35.0% |
| CACCAAAAATAATGTGCTCA+AGG | - | chr1_2:78154547-78154566 | None:intergenic | 35.0% | |
| AGCAACTGATCAAAATTGCA+AGG | - | chr1_2:78154588-78154607 | None:intergenic | 35.0% | |
| TCTGAGTATGTAACTGCAAT+AGG | + | chr1_2:78154700-78154719 | Msa0094800:intron | 35.0% | |
| GATTCAGAATCAGATACTTC+AGG | - | chr1_2:78154785-78154804 | None:intergenic | 35.0% | |
| AAACTAACCTGTGTGGATAA+CGG | - | chr1_2:78154893-78154912 | None:intergenic | 35.0% | |
| ! | ATTTTCTTAAGAGTTCGGGA+AGG | + | chr1_2:78154938-78154957 | Msa0094800:intron | 35.0% |
| TTGTGATGATTTCAGTTGTG+AGG | + | chr1_2:78155003-78155022 | Msa0094800:intron | 35.0% | |
| TGTGATGATTTCAGTTGTGA+GGG | + | chr1_2:78155004-78155023 | Msa0094800:intron | 35.0% | |
| CGTTCAATTGTAGAAGGAAT+TGG | + | chr1_2:78155769-78155788 | Msa0094800:CDS | 35.0% | |
| ! | AATTGGCACTTTTGTTAGTG+AGG | + | chr1_2:78155786-78155805 | Msa0094800:CDS | 35.0% |
| TTGGACAATGTAGTAATGCA+TGG | - | chr1_2:78155858-78155877 | None:intergenic | 35.0% | |
| AAAGATATGGCAAGCAATAG+AGG | - | chr1_2:78155991-78156010 | None:intergenic | 35.0% | |
| ! | ATAATGGAAAAGGGTGAAGA+TGG | + | chr1_2:78156045-78156064 | Msa0094800:CDS | 35.0% |
| GATGAAATTGAGCAGGTAAA+AGG | - | chr1_2:78156484-78156503 | None:intergenic | 35.0% | |
| TTAGTCACATACACCTTGAT+TGG | + | chr1_2:78156593-78156612 | Msa0094800:intron | 35.0% | |
| TAGTCACATACACCTTGATT+GGG | + | chr1_2:78156594-78156613 | Msa0094800:intron | 35.0% | |
| TACGGTCAACATGAATTCAA+TGG | - | chr1_2:78156631-78156650 | None:intergenic | 35.0% | |
| !! | GTGAATTTTAGTGATGACAC+TGG | + | chr1_2:78156725-78156744 | Msa0094800:intron | 35.0% |
| ATTGAGCAACTCTTGAATCA+AGG | + | chr1_2:78156756-78156775 | Msa0094800:CDS | 35.0% | |
| TTGAGCAACTCTTGAATCAA+GGG | + | chr1_2:78156757-78156776 | Msa0094800:CDS | 35.0% | |
| AAACTGCTTCACTTCACTAA+TGG | + | chr1_2:78156803-78156822 | Msa0094800:CDS | 35.0% | |
| CCTAATTTAAACAAACCCAC+AGG | - | chr1_2:78157073-78157092 | None:intergenic | 35.0% | |
| ! | CCTGTGGGTTTGTTTAAATT+AGG | + | chr1_2:78157070-78157089 | Msa0094800:intron | 35.0% |
| TTGTTTAAATTAGGACTCGG+AGG | + | chr1_2:78157079-78157098 | Msa0094800:intron | 35.0% | |
| CGGAAGAAGAATTTCTTGAT+AGG | + | chr1_2:78157120-78157139 | Msa0094800:CDS | 35.0% | |
| TTGATAGGTATGCTAAAGCT+GGG | + | chr1_2:78157135-78157154 | Msa0094800:CDS | 35.0% | |
| CAAGAACTGGATATGGAATT+AGG | + | chr1_2:78157207-78157226 | Msa0094800:CDS | 35.0% | |
| AGCAATCCTAAACTAAACCT+GGG | - | chr1_2:78157430-78157449 | None:intergenic | 35.0% | |
| AAGCAATCCTAAACTAAACC+TGG | - | chr1_2:78157431-78157450 | None:intergenic | 35.0% | |
| TACCATCATGTGCTTATACA+AGG | + | chr1_2:78157573-78157592 | Msa0094800:CDS | 35.0% | |
| !! | TTTTAATTGGGGAGAAGAGA+AGG | + | chr1_2:78157831-78157850 | Msa0094800:three_prime_UTR | 35.0% |
| TTTAATTGGGGAGAAGAGAA+GGG | + | chr1_2:78157832-78157851 | Msa0094800:three_prime_UTR | 35.0% | |
| ! | TTTCAGTCTAACGTATTGGC+GGG | - | chr1_2:78148966-78148985 | None:intergenic | 40.0% |
| GTTTCAGTCTAACGTATTGG+CGG | - | chr1_2:78148967-78148986 | None:intergenic | 40.0% | |
| AAATGGAGAGGAGATGGAAA+GGG | - | chr1_2:78149153-78149172 | None:intergenic | 40.0% | |
| AAAAATGAATCGGAGGTGGA+GGG | - | chr1_2:78149202-78149221 | None:intergenic | 40.0% | |
| AGAGAAAAATGAATCGGAGG+TGG | - | chr1_2:78149206-78149225 | None:intergenic | 40.0% | |
| TCAACAGGAGGTGAAAATCA+AGG | + | chr1_2:78149257-78149276 | Msa0094800:intron | 40.0% | |
| AACTCCTTGCTAACATTCGA+AGG | - | chr1_2:78149353-78149372 | None:intergenic | 40.0% | |
| TCGATGGTTCAAACTCTACA+TGG | + | chr1_2:78149632-78149651 | Msa0094800:CDS | 40.0% | |
| !! | AAGCCTTATTCCACTAAGTG+GGG | - | chr1_2:78150004-78150023 | None:intergenic | 40.0% |
| !! | CAAGCCTTATTCCACTAAGT+GGG | - | chr1_2:78150005-78150024 | None:intergenic | 40.0% |
| TTTGAATCCCAAAGTTCCGA+AGG | + | chr1_2:78150098-78150117 | Msa0094800:CDS | 40.0% | |
| TTTGGATACGAGCTCCAATT+GGG | - | chr1_2:78150136-78150155 | None:intergenic | 40.0% | |
| ! | CAAGGGCACGATAATTTCTT+TGG | - | chr1_2:78150154-78150173 | None:intergenic | 40.0% |
| GCATTTGCATATTGTGAGGA+TGG | - | chr1_2:78150330-78150349 | None:intergenic | 40.0% | |
| GTAGGCATTTGCATATTGTG+AGG | - | chr1_2:78150334-78150353 | None:intergenic | 40.0% | |
| CAGAGCTTTGCATGTCAATA+GGG | - | chr1_2:78150750-78150769 | None:intergenic | 40.0% | |
| AACAGGGTCTCCAAAATGTT+CGG | + | chr1_2:78150857-78150876 | Msa0094800:intron | 40.0% | |
| AAGACCATAAACTCAGATGG+AGG | - | chr1_2:78150991-78151010 | None:intergenic | 40.0% | |
| ATCTGGCATCAACCTGAAAA+TGG | - | chr1_2:78151361-78151380 | None:intergenic | 40.0% | |
| AATTTCGGTAGTCCAAGTAC+TGG | - | chr1_2:78151507-78151526 | None:intergenic | 40.0% | |
| !! | GGAAAGGAAGTATCTGCAAA+AGG | - | chr1_2:78151714-78151733 | None:intergenic | 40.0% |
| ATTTCAAATGTGCTGGAGAC+TGG | + | chr1_2:78151769-78151788 | Msa0094800:CDS | 40.0% | |
| TTCAATTAACACAGGGATGG+AGG | + | chr1_2:78151914-78151933 | Msa0094800:intron | 40.0% | |
| TTTCGTAGAAGTAACAGGGA+TGG | + | chr1_2:78152017-78152036 | Msa0094800:intron | 40.0% | |
| AGGATGAAATTTGTGGATGG+AGG | + | chr1_2:78152231-78152250 | Msa0094800:intron | 40.0% | |
| GGATGAAATTTGTGGATGGA+GGG | + | chr1_2:78152232-78152251 | Msa0094800:intron | 40.0% | |
| GAACTACCGTAATAACCAAG+GGG | - | chr1_2:78152349-78152368 | None:intergenic | 40.0% | |
| GGTTATTACGGTAGTTCATG+TGG | + | chr1_2:78152352-78152371 | Msa0094800:intron | 40.0% | |
| CATGTTGGAATCAGAAGGAA+TGG | - | chr1_2:78152521-78152540 | None:intergenic | 40.0% | |
| TGAGACATGTTGGAATCAGA+AGG | - | chr1_2:78152526-78152545 | None:intergenic | 40.0% | |
| ! | AAAGTGTTCCTGATTGAAGG+GGG | + | chr1_2:78152880-78152899 | Msa0094800:intron | 40.0% |
| GAAACAGCTATGGTATACAG+TGG | - | chr1_2:78153297-78153316 | None:intergenic | 40.0% | |
| TAAACCTTGTGTGTCCTTTC+AGG | + | chr1_2:78153490-78153509 | Msa0094800:intron | 40.0% | |
| !! | CAAGAAGTATCCTGCTTATC+CGG | - | chr1_2:78153563-78153582 | None:intergenic | 40.0% |
| ! | TACTTCTTGTTATCCTGTGC+GGG | + | chr1_2:78153574-78153593 | Msa0094800:CDS | 40.0% |
| TTGTGGGTTCAGTCTCAAAA+TGG | + | chr1_2:78153881-78153900 | Msa0094800:CDS | 40.0% | |
| AAAAGATCAACACACACCTG+AGG | - | chr1_2:78153931-78153950 | None:intergenic | 40.0% | |
| AGGGATTTGAGTATTATGGG+TGG | - | chr1_2:78154101-78154120 | None:intergenic | 40.0% | |
| !! | TCAAGGGTGGTGCTATAATA+GGG | - | chr1_2:78154120-78154139 | None:intergenic | 40.0% |
| GTTTAGTGAAACGTCGTAGA+GGG | - | chr1_2:78154164-78154183 | None:intergenic | 40.0% | |
| ! | AGAAGAGCCGACTCAAATAA+AGG | - | chr1_2:78154186-78154205 | None:intergenic | 40.0% |
| ! | GATAGCTGGCTTATAAAGGA+GGG | - | chr1_2:78154284-78154303 | None:intergenic | 40.0% |
| ! | TGATAGCTGGCTTATAAAGG+AGG | - | chr1_2:78154285-78154304 | None:intergenic | 40.0% |
| ! | CCTTGATAGCTGGCTTATAA+AGG | - | chr1_2:78154288-78154307 | None:intergenic | 40.0% |
| CCTTTATAAGCCAGCTATCA+AGG | + | chr1_2:78154285-78154304 | Msa0094800:intron | 40.0% | |
| ! | AGTGGAGTATTCAAATGGCT+TGG | - | chr1_2:78154319-78154338 | None:intergenic | 40.0% |
| ! | TGCTCAGTGGAGTATTCAAA+TGG | - | chr1_2:78154324-78154343 | None:intergenic | 40.0% |
| ACATGGAACTGGGTATTACA+AGG | - | chr1_2:78154371-78154390 | None:intergenic | 40.0% | |
| AAGTGCCTCAATTGCTCAAT+CGG | + | chr1_2:78154479-78154498 | Msa0094800:intron | 40.0% | |
| ! | GTCACTAGCTGATTAAGTTG+AGG | + | chr1_2:78154656-78154675 | Msa0094800:intron | 40.0% |
| GTGATGATTTCAGTTGTGAG+GGG | + | chr1_2:78155005-78155024 | Msa0094800:intron | 40.0% | |
| TGATGATTTCAGTTGTGAGG+GGG | + | chr1_2:78155006-78155025 | Msa0094800:intron | 40.0% | |
| ! | GGGGGAATTCATTCTCTTTT+TGG | + | chr1_2:78155024-78155043 | Msa0094800:intron | 40.0% |
| CCTTCTACAATTGAACGTTC+AGG | - | chr1_2:78155766-78155785 | None:intergenic | 40.0% | |
| CCTGAACGTTCAATTGTAGA+AGG | + | chr1_2:78155763-78155782 | Msa0094800:CDS | 40.0% | |
| GGCAGAAGGATATTGCTTAA+TGG | - | chr1_2:78155812-78155831 | None:intergenic | 40.0% | |
| ACATGAGCAAGCTCTATATG+TGG | - | chr1_2:78155833-78155852 | None:intergenic | 40.0% | |
| ! | TGAAGGTGTAAAGCAGTCAT+TGG | + | chr1_2:78155894-78155913 | Msa0094800:CDS | 40.0% |
| AAGCAATAGAGGCTTCCAAA+GGG | - | chr1_2:78155980-78155999 | None:intergenic | 40.0% | |
| !! | AAGATGGAGGCATCACAATT+TGG | + | chr1_2:78156061-78156080 | Msa0094800:CDS | 40.0% |
| !! | AGATGGAGGCATCACAATTT+GGG | + | chr1_2:78156062-78156081 | Msa0094800:CDS | 40.0% |
| GAGTCCGAGATGAAGTTAAT+TGG | + | chr1_2:78156141-78156160 | Msa0094800:intron | 40.0% | |
| ! | CTTTGAGGATGAAATTGAGC+AGG | - | chr1_2:78156491-78156510 | None:intergenic | 40.0% |
| GGCTTAACAAGAGAACTTTG+AGG | - | chr1_2:78156506-78156525 | None:intergenic | 40.0% | |
| AGTCACATACACCTTGATTG+GGG | + | chr1_2:78156595-78156614 | Msa0094800:intron | 40.0% | |
| TTGAATCAAGGGAAGTCATG+TGG | + | chr1_2:78156768-78156787 | Msa0094800:CDS | 40.0% | |
| TGAGAAAGGAGATGAAGAAG+AGG | + | chr1_2:78156857-78156876 | Msa0094800:CDS | 40.0% | |
| ! | TGACTCTGAAGATTACGATG+AGG | + | chr1_2:78156914-78156933 | Msa0094800:CDS | 40.0% |
| CACAGAACCTTGTAGACAAA+AGG | - | chr1_2:78156998-78157017 | None:intergenic | 40.0% | |
| CTTGATAGGTATGCTAAAGC+TGG | + | chr1_2:78157134-78157153 | Msa0094800:CDS | 40.0% | |
| TGATAGGTATGCTAAAGCTG+GGG | + | chr1_2:78157136-78157155 | Msa0094800:CDS | 40.0% | |
| CGAAGATCAAGAACTGGATA+TGG | + | chr1_2:78157200-78157219 | Msa0094800:CDS | 40.0% | |
| TGTTGTCATGATATGCGTAC+AGG | + | chr1_2:78157498-78157517 | Msa0094800:intron | 40.0% | |
| GTCCTTGTATAAGCACATGA+TGG | - | chr1_2:78157578-78157597 | None:intergenic | 40.0% | |
| CATGTGCTTATACAAGGACA+AGG | + | chr1_2:78157579-78157598 | Msa0094800:CDS | 40.0% | |
| GGAAATATAAACCACACCCA+GGG | - | chr1_2:78157644-78157663 | None:intergenic | 40.0% | |
| TGGAAATATAAACCACACCC+AGG | - | chr1_2:78157645-78157664 | None:intergenic | 40.0% | |
| AAATGTTTGTTCCAAGGAGC+AGG | + | chr1_2:78157746-78157765 | Msa0094800:three_prime_UTR | 40.0% | |
| !!! | TTTTTTTTTTTTGGGGGGGG+AGG | + | chr1_2:78157771-78157790 | Msa0094800:three_prime_UTR | 40.0% |
| !!! | TTTTTTTTTTTGGGGGGGGA+GGG | + | chr1_2:78157772-78157791 | Msa0094800:three_prime_UTR | 40.0% |
| GAAATGGAGAGGAGATGGAA+AGG | - | chr1_2:78149154-78149173 | None:intergenic | 45.0% | |
| AGAATTGGGGAAATTACCGG+CGG | - | chr1_2:78149176-78149195 | None:intergenic | 45.0% | |
| GAAAAATGAATCGGAGGTGG+AGG | - | chr1_2:78149203-78149222 | None:intergenic | 45.0% | |
| !!! | GCGCGTGTGATTTTTGAGAT+AGG | - | chr1_2:78149303-78149322 | None:intergenic | 45.0% |
| CTTGCTAACATTCGAAGGTG+TGG | - | chr1_2:78149348-78149367 | None:intergenic | 45.0% | |
| CACACCTTCGAATGTTAGCA+AGG | + | chr1_2:78149346-78149365 | Msa0094800:CDS | 45.0% | |
| AATCCACGGCAGCAACAATT+CGG | - | chr1_2:78149543-78149562 | None:intergenic | 45.0% | |
| GAGGGTAGTCAGATCATTAG+AGG | + | chr1_2:78149870-78149889 | Msa0094800:intron | 45.0% | |
| GGTAGTCAGATCATTAGAGG+TGG | + | chr1_2:78149873-78149892 | Msa0094800:intron | 45.0% | |
| AGTCAGATCATTAGAGGTGG+AGG | + | chr1_2:78149876-78149895 | Msa0094800:intron | 45.0% | |
| GTCAGATCATTAGAGGTGGA+GGG | + | chr1_2:78149877-78149896 | Msa0094800:intron | 45.0% | |
| CTTATTCCACTAAGTGGGGT+CGG | - | chr1_2:78150000-78150019 | None:intergenic | 45.0% | |
| !! | CCAAGCCTTATTCCACTAAG+TGG | - | chr1_2:78150006-78150025 | None:intergenic | 45.0% |
| CCACTTAGTGGAATAAGGCT+TGG | + | chr1_2:78150003-78150022 | Msa0094800:intron | 45.0% | |
| CTTAGTGGAATAAGGCTTGG+TGG | + | chr1_2:78150006-78150025 | Msa0094800:intron | 45.0% | |
| TTGGATACGAGCTCCAATTG+GGG | - | chr1_2:78150135-78150154 | None:intergenic | 45.0% | |
| CTTTGGATACGAGCTCCAAT+TGG | - | chr1_2:78150137-78150156 | None:intergenic | 45.0% | |
| GAAATTATCGTGCCCTTGCT+TGG | + | chr1_2:78150156-78150175 | Msa0094800:CDS | 45.0% | |
| TTTCCATGTCTGCTCTGTCA+TGG | - | chr1_2:78150298-78150317 | None:intergenic | 45.0% | |
| TGACAGAGCAGACATGGAAA+TGG | + | chr1_2:78150298-78150317 | Msa0094800:CDS | 45.0% | |
| TGGAAACAGACTTACTACCG+TGG | + | chr1_2:78150635-78150654 | Msa0094800:intron | 45.0% | |
| GGAAACAGACTTACTACCGT+GGG | + | chr1_2:78150636-78150655 | Msa0094800:intron | 45.0% | |
| GAACGAGAAAGACATTCCCA+CGG | - | chr1_2:78150655-78150674 | None:intergenic | 45.0% | |
| GCAGAGCTTTGCATGTCAAT+AGG | - | chr1_2:78150751-78150770 | None:intergenic | 45.0% | |
| ACAGGGTCTCCAAAATGTTC+GGG | + | chr1_2:78150858-78150877 | Msa0094800:intron | 45.0% | |
| CATAAACTCAGATGGAGGAG+AGG | - | chr1_2:78150986-78151005 | None:intergenic | 45.0% | |
| CTCTCCTCCATCTGAGTTTA+TGG | + | chr1_2:78150984-78151003 | Msa0094800:intron | 45.0% | |
| GTAGGACTTCACCTGTAAGT+AGG | - | chr1_2:78151079-78151098 | None:intergenic | 45.0% | |
| !! | AGCTAGAGTTGATGGCATGT+AGG | - | chr1_2:78151097-78151116 | None:intergenic | 45.0% |
| AGTAGAGGAGCTAGAGTTGA+TGG | - | chr1_2:78151105-78151124 | None:intergenic | 45.0% | |
| ! | TTTTCTCTTCCCTCGTCACA+CGG | + | chr1_2:78151241-78151260 | Msa0094800:CDS | 45.0% |
| GCATCAACCTGAAAATGGAG+GGG | - | chr1_2:78151356-78151375 | None:intergenic | 45.0% | |
| GGCATCAACCTGAAAATGGA+GGG | - | chr1_2:78151357-78151376 | None:intergenic | 45.0% | |
| TGGCATCAACCTGAAAATGG+AGG | - | chr1_2:78151358-78151377 | None:intergenic | 45.0% | |
| GGGAGAGAATCCTCTCTAAA+AGG | - | chr1_2:78151735-78151754 | None:intergenic | 45.0% | |
| TTAGAGAGGATTCTCTCCCT+AGG | + | chr1_2:78151736-78151755 | Msa0094800:CDS | 45.0% | |
| ATCTGCAATCTTCCCAGCAT+TGG | + | chr1_2:78151969-78151988 | Msa0094800:CDS | 45.0% | |
| TGAAATTTGTGGATGGAGGG+AGG | + | chr1_2:78152235-78152254 | Msa0094800:CDS | 45.0% | |
| ATTTACTCAGCTATGCCCCT+TGG | + | chr1_2:78152331-78152350 | Msa0094800:intron | 45.0% | |
| GCTATGCCCCTTGGTTATTA+CGG | + | chr1_2:78152340-78152359 | Msa0094800:intron | 45.0% | |
| ! | ATTTTTGTAGGGGCCACCAA+TGG | + | chr1_2:78152381-78152400 | Msa0094800:intron | 45.0% |
| TCAATGGAAGTCTCCATTGG+TGG | - | chr1_2:78152397-78152416 | None:intergenic | 45.0% | |
| CTGTCAATGGAAGTCTCCAT+TGG | - | chr1_2:78152400-78152419 | None:intergenic | 45.0% | |
| CCAATAACTCCCCCATAGAA+CGG | - | chr1_2:78152474-78152493 | None:intergenic | 45.0% | |
| AAAACTTGCCCCCTTCAATC+AGG | - | chr1_2:78152891-78152910 | None:intergenic | 45.0% | |
| !! | CAGTTACTTTGGGGTACTGA+TGG | + | chr1_2:78153104-78153123 | Msa0094800:intron | 45.0% |
| !! | TTTGGGGTACTGATGGCATA+TGG | + | chr1_2:78153111-78153130 | Msa0094800:CDS | 45.0% |
| GTGTGGTACAGAAACAGCTA+TGG | - | chr1_2:78153307-78153326 | None:intergenic | 45.0% | |
| AACTGGGTACTTGGAGAACT+AGG | + | chr1_2:78153342-78153361 | Msa0094800:CDS | 45.0% | |
| ATCTCCTGAAAGGACACACA+AGG | - | chr1_2:78153497-78153516 | None:intergenic | 45.0% | |
| ATCAGCACTCATCTCCTGAA+AGG | - | chr1_2:78153507-78153526 | None:intergenic | 45.0% | |
| CTGAAAAGAGAAGCAGAGTC+AGG | - | chr1_2:78153698-78153717 | None:intergenic | 45.0% | |
| AGAAGGGGTAGAAAATCAGG+GGG | - | chr1_2:78153733-78153752 | None:intergenic | 45.0% | |
| GAGAAGGGGTAGAAAATCAG+GGG | - | chr1_2:78153734-78153753 | None:intergenic | 45.0% | |
| GGAGAAGGGGTAGAAAATCA+GGG | - | chr1_2:78153735-78153754 | None:intergenic | 45.0% | |
| TGGAGAAGGGGTAGAAAATC+AGG | - | chr1_2:78153736-78153755 | None:intergenic | 45.0% | |
| AGACTGAACCCACAAGAGAT+GGG | - | chr1_2:78153876-78153895 | None:intergenic | 45.0% | |
| AAAATGGCTAACGTCCAGTC+TGG | + | chr1_2:78153897-78153916 | Msa0094800:CDS | 45.0% | |
| !! | CTCAAGGGTGGTGCTATAAT+AGG | - | chr1_2:78154121-78154140 | None:intergenic | 45.0% |
| GGTTTAGTGAAACGTCGTAG+AGG | - | chr1_2:78154165-78154184 | None:intergenic | 45.0% | |
| TAAGCCAGCTATCAAGGGAA+AGG | + | chr1_2:78154291-78154310 | Msa0094800:intron | 45.0% | |
| ! | GATTGAGCAATTGAGGCACT+TGG | - | chr1_2:78154480-78154499 | None:intergenic | 45.0% |
| ! | TGATGCCGATTGAGCAATTG+AGG | - | chr1_2:78154487-78154506 | None:intergenic | 45.0% |
| TTTGCAAGAAAAATGGGCCG+TGG | + | chr1_2:78154811-78154830 | Msa0094800:CDS | 45.0% | |
| !! | AGCTGAGAAGAGCGTTTGAA+TGG | + | chr1_2:78154963-78154982 | Msa0094800:intron | 45.0% |
| !! | GCTGAGAAGAGCGTTTGAAT+GGG | + | chr1_2:78154964-78154983 | Msa0094800:intron | 45.0% |
| AGATCCTATGAGTATGGGAC+AGG | + | chr1_2:78155284-78155303 | Msa0094800:intron | 45.0% | |
| TCTGTCGTGCTATCTGTTGA+TGG | + | chr1_2:78155541-78155560 | Msa0094800:CDS | 45.0% | |
| CTGTCGTGCTATCTGTTGAT+GGG | + | chr1_2:78155542-78155561 | Msa0094800:CDS | 45.0% | |
| ACAATTGAACGTTCAGGCAC+AGG | - | chr1_2:78155760-78155779 | None:intergenic | 45.0% | |
| CAAGCTCTATATGTGGCAGA+AGG | - | chr1_2:78155826-78155845 | None:intergenic | 45.0% | |
| CAAGCAATAGAGGCTTCCAA+AGG | - | chr1_2:78155981-78156000 | None:intergenic | 45.0% | |
| ATGGAAAAGGGTGAAGATGG+AGG | + | chr1_2:78156048-78156067 | Msa0094800:CDS | 45.0% | |
| ! | TGTATCCAGCAGCTCTTTTG+AGG | + | chr1_2:78156101-78156120 | Msa0094800:CDS | 45.0% |
| GCAGGTAAAAGGGCAATCAA+AGG | - | chr1_2:78156473-78156492 | None:intergenic | 45.0% | |
| GTCACATACACCTTGATTGG+GGG | + | chr1_2:78156596-78156615 | Msa0094800:intron | 45.0% | |
| GAAAATAGTGCCCCCAATCA+AGG | - | chr1_2:78156609-78156628 | None:intergenic | 45.0% | |
| CTGCTTCACTTCACTAATGG+AGG | + | chr1_2:78156806-78156825 | Msa0094800:CDS | 45.0% | |
| AGAAGAGGCTGAAGATGATG+AGG | + | chr1_2:78156872-78156891 | Msa0094800:CDS | 45.0% | |
| GGATGTCGAAGATCAAGAAC+TGG | + | chr1_2:78157194-78157213 | Msa0094800:CDS | 45.0% | |
| ! | CTGTCTCCCAGGTTTAGTTT+AGG | + | chr1_2:78157421-78157440 | Msa0094800:intron | 45.0% |
| ! | AGTTTTCTGAATGCCTTCCC+TGG | + | chr1_2:78157624-78157643 | Msa0094800:CDS | 45.0% |
| ! | GTTTTCTGAATGCCTTCCCT+GGG | + | chr1_2:78157625-78157644 | Msa0094800:CDS | 45.0% |
| ATATAAACCACACCCAGGGA+AGG | - | chr1_2:78157640-78157659 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTGGGGGGGGAG+GGG | + | chr1_2:78157773-78157792 | Msa0094800:three_prime_UTR | 45.0% |
| !! | TAAATATAATTATAAAATCA+AGG | - | chr1_2:78151654-78151673 | None:intergenic | 5.0% |
| !! | TATTCTTATTAATAATTATA+CGG | + | chr1_2:78153050-78153069 | Msa0094800:intron | 5.0% |
| !!! | TTAATTTATTTTTTTAATTG+GGG | + | chr1_2:78157820-78157839 | Msa0094800:three_prime_UTR | 5.0% |
| ! | GTCTAACGTATTGGCGGGAA+GGG | - | chr1_2:78148961-78148980 | None:intergenic | 50.0% |
| ! | AGTCTAACGTATTGGCGGGA+AGG | - | chr1_2:78148962-78148981 | None:intergenic | 50.0% |
| !! | TGGAAATTCGCGGTGTTGCT+CGG | - | chr1_2:78149018-78149037 | None:intergenic | 50.0% |
| AGCAACACCGCGAATTTCCA+TGG | + | chr1_2:78149018-78149037 | Msa0094800:CDS | 50.0% | |
| AACACCGCGAATTTCCATGG+CGG | + | chr1_2:78149021-78149040 | Msa0094800:CDS | 50.0% | |
| ATCTCCGCCATGGAAATTCG+CGG | - | chr1_2:78149028-78149047 | None:intergenic | 50.0% | |
| GATGAGAGTAATCTCCGCCA+TGG | - | chr1_2:78149038-78149057 | None:intergenic | 50.0% | |
| AGGAGATGGAAAGGGAAGTG+AGG | - | chr1_2:78149145-78149164 | None:intergenic | 50.0% | |
| AATTACCGGCGGAAATGGAG+AGG | - | chr1_2:78149165-78149184 | None:intergenic | 50.0% | |
| AGGTGGAGGGTGAAGAATTG+GGG | - | chr1_2:78149189-78149208 | None:intergenic | 50.0% | |
| GAGGTGGAGGGTGAAGAATT+GGG | - | chr1_2:78149190-78149209 | None:intergenic | 50.0% | |
| CGCCGCAATGTTGATATCAC+CGG | + | chr1_2:78149320-78149339 | Msa0094800:CDS | 50.0% | |
| CGCCGGTGATATCAACATTG+CGG | - | chr1_2:78149325-78149344 | None:intergenic | 50.0% | |
| TGCAGATTCGGCACAAGTTC+CGG | - | chr1_2:78149586-78149605 | None:intergenic | 50.0% | |
| TGCACTTCTCAGACCCTTTC+AGG | + | chr1_2:78149684-78149703 | Msa0094800:CDS | 50.0% | |
| CGACCCCACTTAGTGGAATA+AGG | + | chr1_2:78149998-78150017 | Msa0094800:intron | 50.0% | |
| TGCTCTGTCATGGTTCGCTA+CGG | - | chr1_2:78150288-78150307 | None:intergenic | 50.0% | |
| GAACCATGACAGAGCAGACA+TGG | + | chr1_2:78150292-78150311 | Msa0094800:CDS | 50.0% | |
| GGTCTCCAAAATGTTCGGGA+TGG | + | chr1_2:78150862-78150881 | Msa0094800:intron | 50.0% | |
| ! | CAAGGCCATCCCGAACATTT+TGG | - | chr1_2:78150870-78150889 | None:intergenic | 50.0% |
| CAAAATGTTCGGGATGGCCT+TGG | + | chr1_2:78150868-78150887 | Msa0094800:intron | 50.0% | |
| TTTCCTATGCCGTGTGACGA+GGG | - | chr1_2:78151253-78151272 | None:intergenic | 50.0% | |
| CCGTTCTATGGGGGAGTTAT+TGG | + | chr1_2:78152471-78152490 | Msa0094800:CDS | 50.0% | |
| TTTGCGCTAGCAATGAGGTG+TGG | - | chr1_2:78153324-78153343 | None:intergenic | 50.0% | |
| ACCTCATTGCTAGCGCAAAC+TGG | + | chr1_2:78153325-78153344 | Msa0094800:CDS | 50.0% | |
| CCTCATTGCTAGCGCAAACT+GGG | + | chr1_2:78153326-78153345 | Msa0094800:CDS | 50.0% | |
| GATTGAGTGTGTCTGACCTC+TGG | - | chr1_2:78153378-78153397 | None:intergenic | 50.0% | |
| ATGGGACGATGTGTGGGATA+TGG | - | chr1_2:78153858-78153877 | None:intergenic | 50.0% | |
| CAAGAGATGGGACGATGTGT+GGG | - | chr1_2:78153864-78153883 | None:intergenic | 50.0% | |
| ACAAGAGATGGGACGATGTG+TGG | - | chr1_2:78153865-78153884 | None:intergenic | 50.0% | |
| ACACATCGTCCCATCTCTTG+TGG | + | chr1_2:78153864-78153883 | Msa0094800:CDS | 50.0% | |
| CACATCGTCCCATCTCTTGT+GGG | + | chr1_2:78153865-78153884 | Msa0094800:CDS | 50.0% | |
| GAGACTGAACCCACAAGAGA+TGG | - | chr1_2:78153877-78153896 | None:intergenic | 50.0% | |
| TGACAAGTGTCAACCAGCTC+TGG | + | chr1_2:78154225-78154244 | Msa0094800:intron | 50.0% | |
| GGGTAGTATGAGATGCTCAG+TGG | - | chr1_2:78154337-78154356 | None:intergenic | 50.0% | |
| ! | TGAGCAATTGAGGCACTTGG+AGG | - | chr1_2:78154477-78154496 | None:intergenic | 50.0% |
| TGTGCTCAAGGTCACTACTG+AGG | - | chr1_2:78154535-78154554 | None:intergenic | 50.0% | |
| CTGCAATAGGTTGTTGAGCG+TGG | + | chr1_2:78154713-78154732 | Msa0094800:intron | 50.0% | |
| AATCGCTGCTCTGGCAGTTA+TGG | + | chr1_2:78154736-78154755 | Msa0094800:CDS | 50.0% | |
| ATCGCTGCTCTGGCAGTTAT+GGG | + | chr1_2:78154737-78154756 | Msa0094800:CDS | 50.0% | |
| TGGCAGTTATGGGTCAGACA+TGG | + | chr1_2:78154747-78154766 | Msa0094800:CDS | 50.0% | |
| GGCAGTTATGGGTCAGACAT+GGG | + | chr1_2:78154748-78154767 | Msa0094800:CDS | 50.0% | |
| GTCAGACATGGGAAGACTCT+AGG | + | chr1_2:78154759-78154778 | Msa0094800:CDS | 50.0% | |
| AGAAAAATGGGCCGTGGATC+AGG | + | chr1_2:78154817-78154836 | Msa0094800:CDS | 50.0% | |
| ! | TTTTGCTGCACTGTTGCAGC+AGG | + | chr1_2:78154856-78154875 | Msa0094800:CDS | 50.0% |
| GCTAACACCGTTATCCACAC+AGG | + | chr1_2:78154883-78154902 | Msa0094800:CDS | 50.0% | |
| GACACCTGTCCCATACTCAT+AGG | - | chr1_2:78155291-78155310 | None:intergenic | 50.0% | |
| TGTCAGAGCTGCTGTCAGTT+TGG | + | chr1_2:78155590-78155609 | Msa0094800:CDS | 50.0% | |
| GGTCTGCAATGATTGCAGAG+TGG | + | chr1_2:78155611-78155630 | Msa0094800:CDS | 50.0% | |
| TGATTGCAGAGTGGCATGCA+TGG | + | chr1_2:78155620-78155639 | Msa0094800:CDS | 50.0% | |
| GATTGCAGAGTGGCATGCAT+GGG | + | chr1_2:78155621-78155640 | Msa0094800:CDS | 50.0% | |
| ATTGAACGTTCAGGCACAGG+TGG | - | chr1_2:78155757-78155776 | None:intergenic | 50.0% | |
| AGAGGCTTCCAAAGGGAACT+GGG | - | chr1_2:78155973-78155992 | None:intergenic | 50.0% | |
| TAGAGGCTTCCAAAGGGAAC+TGG | - | chr1_2:78155974-78155993 | None:intergenic | 50.0% | |
| AGTAGCCTCAAAAGAGCTGC+TGG | - | chr1_2:78156109-78156128 | None:intergenic | 50.0% | |
| !!! | AGCAGCTCTTTTGAGGCTAC+TGG | + | chr1_2:78156108-78156127 | Msa0094800:CDS | 50.0% |
| GGCTGAAGATGATGAGGATG+AGG | + | chr1_2:78156878-78156897 | Msa0094800:CDS | 50.0% | |
| GTATGCTAAAGCTGGGGCAT+TGG | + | chr1_2:78157142-78157161 | Msa0094800:CDS | 50.0% | |
| !! | AAAGCTGGGGCATTGGAAGA+TGG | + | chr1_2:78157149-78157168 | Msa0094800:CDS | 50.0% |
| TGGGAGACAGCAAGTAAAGC+CGG | - | chr1_2:78157411-78157430 | None:intergenic | 50.0% | |
| AAACTCATGACGAGCTGCGA+CGG | - | chr1_2:78157609-78157628 | None:intergenic | 50.0% | |
| ! | GGCTGAGGGTTTGGTTGAGA+AGG | - | chr1_2:78149066-78149085 | None:intergenic | 55.0% |
| GAAAGGGAAGTGAGGAGCGA+CGG | - | chr1_2:78149137-78149156 | None:intergenic | 55.0% | |
| CATCTCCTCTCCATTTCCGC+CGG | + | chr1_2:78149157-78149176 | Msa0094800:CDS | 55.0% | |
| GGGGAAATTACCGGCGGAAA+TGG | - | chr1_2:78149170-78149189 | None:intergenic | 55.0% | |
| GGAGGTGGAGGGTGAAGAAT+TGG | - | chr1_2:78149191-78149210 | None:intergenic | 55.0% | |
| ! | AACATTCGAAGGTGTGGCGC+CGG | - | chr1_2:78149342-78149361 | None:intergenic | 55.0% |
| GTTCCGAATTGTTGCTGCCG+TGG | + | chr1_2:78149537-78149556 | Msa0094800:intron | 55.0% | |
| CTAAGTGGGGTCGGCTACAT+GGG | - | chr1_2:78149991-78150010 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr1_2:78149992-78150011 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr1_2:78149991-78150010 | Msa0094800:intron | 55.0% | |
| TCCCAAAGTTCCGAAGGAGC+CGG | + | chr1_2:78150104-78150123 | Msa0094800:CDS | 55.0% | |
| ! | ACCGGCTCCTTCGGAACTTT+GGG | - | chr1_2:78150108-78150127 | None:intergenic | 55.0% |
| !! | TACCGGCTCCTTCGGAACTT+TGG | - | chr1_2:78150109-78150128 | None:intergenic | 55.0% |
| AGCTCCAATTGGGGTGGTAC+CGG | - | chr1_2:78150126-78150145 | None:intergenic | 55.0% | |
| GATACGAGCTCCAATTGGGG+TGG | - | chr1_2:78150132-78150151 | None:intergenic | 55.0% | |
| GTTTCCTATGCCGTGTGACG+AGG | - | chr1_2:78151254-78151273 | None:intergenic | 55.0% | |
| GGTGAGCTGACACCAGCTAA+AGG | - | chr1_2:78151545-78151564 | None:intergenic | 55.0% | |
| AAGCAACCAGCGCCGTTCTA+TGG | + | chr1_2:78152459-78152478 | Msa0094800:CDS | 55.0% | |
| AGCAACCAGCGCCGTTCTAT+GGG | + | chr1_2:78152460-78152479 | Msa0094800:CDS | 55.0% | |
| !! | GGGGTACTGATGGCATATGG+TGG | + | chr1_2:78153114-78153133 | Msa0094800:CDS | 55.0% |
| GGCATATGGTGGTCTGCAAG+AGG | + | chr1_2:78153125-78153144 | Msa0094800:CDS | 55.0% | |
| ATGGTGGTCTGCAAGAGGTG+AGG | + | chr1_2:78153130-78153149 | Msa0094800:intron | 55.0% | |
| CCCAGTTTGCGCTAGCAATG+AGG | - | chr1_2:78153329-78153348 | None:intergenic | 55.0% | |
| GCTAGCGCAAACTGGGTACT+TGG | + | chr1_2:78153333-78153352 | Msa0094800:CDS | 55.0% | |
| ACTAGGCTCCTGTCTACCAG+AGG | + | chr1_2:78153359-78153378 | Msa0094800:CDS | 55.0% | |
| GTGTCTGACCTCTGGTAGAC+AGG | - | chr1_2:78153370-78153389 | None:intergenic | 55.0% | |
| ! | TAACGTCCAGTCTGGAGCCT+TGG | + | chr1_2:78153905-78153924 | Msa0094800:CDS | 55.0% |
| TCAACACACACCTGAGGCCA+AGG | - | chr1_2:78153925-78153944 | None:intergenic | 55.0% | |
| ! | GGCACCTTTCCCTTGATAGC+TGG | - | chr1_2:78154298-78154317 | None:intergenic | 55.0% |
| GCCAATTGCTGCCTGATCCA+CGG | - | chr1_2:78154831-78154850 | None:intergenic | 55.0% | |
| CTGCACTGTTGCAGCAGGTT+TGG | + | chr1_2:78154861-78154880 | Msa0094800:CDS | 55.0% | |
| GGCGCTCAAACTAACCTGTG+TGG | - | chr1_2:78154900-78154919 | None:intergenic | 55.0% | |
| GAAGCGAACCCAGTTCCCTT+TGG | + | chr1_2:78155962-78155981 | Msa0094800:CDS | 55.0% | |
| !! | GGCTTTACTTGCTGTCTCCC+AGG | + | chr1_2:78157410-78157429 | Msa0094800:intron | 55.0% |
| !! | TGTGAACGTTGGTGGCGTCG+GGG | - | chr1_2:78149087-78149106 | None:intergenic | 60.0% |
| !! | GTGTGAACGTTGGTGGCGTC+GGG | - | chr1_2:78149088-78149107 | None:intergenic | 60.0% |
| !! | GGTGTGAACGTTGGTGGCGT+CGG | - | chr1_2:78149089-78149108 | None:intergenic | 60.0% |
| ! | GGTGGAGGTGTGAACGTTGG+TGG | - | chr1_2:78149095-78149114 | None:intergenic | 60.0% |
| AGTGAGGAGCGACGGAGAGA+CGG | - | chr1_2:78149129-78149148 | None:intergenic | 60.0% | |
| CGGCGGAAATGGAGAGGAGA+TGG | - | chr1_2:78149159-78149178 | None:intergenic | 60.0% | |
| CTTCCCTCGTCACACGGCAT+AGG | + | chr1_2:78151247-78151266 | Msa0094800:CDS | 60.0% | |
| GCAACCAGCGCCGTTCTATG+GGG | + | chr1_2:78152461-78152480 | Msa0094800:CDS | 60.0% | |
| CAACCAGCGCCGTTCTATGG+GGG | + | chr1_2:78152462-78152481 | Msa0094800:CDS | 60.0% | |
| CTGTGCGGGTTTCTGCTGCT+GGG | + | chr1_2:78153588-78153607 | Msa0094800:CDS | 60.0% | |
| TGTGCGGGTTTCTGCTGCTG+GGG | + | chr1_2:78153589-78153608 | Msa0094800:CDS | 60.0% | |
| GAGGGTAGTTGCCACGACGT+CGG | - | chr1_2:78154146-78154165 | None:intergenic | 60.0% | |
| TGAGCGTGGAATCGCTGCTC+TGG | + | chr1_2:78154727-78154746 | Msa0094800:CDS | 60.0% | |
| GCCGTGGATCAGGCAGCAAT+TGG | + | chr1_2:78154827-78154846 | Msa0094800:CDS | 60.0% | |
| CTGAATGCCTTCCCTGGGTG+TGG | + | chr1_2:78157630-78157649 | Msa0094800:CDS | 60.0% | |
| ! | GGCGGTGGAGGTGTGAACGT+TGG | - | chr1_2:78149098-78149117 | None:intergenic | 65.0% |
| GACGGAGAGACGGTCGAGCT+CGG | - | chr1_2:78149119-78149138 | None:intergenic | 65.0% | |
| !! | TGGGGTGGTACCGGCTCCTT+CGG | - | chr1_2:78150117-78150136 | None:intergenic | 65.0% |
| GGAGCCGGTACCACCCCAAT+TGG | + | chr1_2:78150119-78150138 | Msa0094800:CDS | 65.0% | |
| ACTCCCCCATAGAACGGCGC+TGG | - | chr1_2:78152468-78152487 | None:intergenic | 65.0% | |
| CCAGCAGCAGAAACCCGCAC+AGG | - | chr1_2:78153590-78153609 | None:intergenic | 65.0% | |
| CCTGTGCGGGTTTCTGCTGC+TGG | + | chr1_2:78153587-78153606 | Msa0094800:CDS | 65.0% | |
| CTGAGGCCAAGGCTCCAGAC+TGG | - | chr1_2:78153914-78153933 | None:intergenic | 65.0% | |
| ! | CAGTCTGGAGCCTTGGCCTC+AGG | + | chr1_2:78153912-78153931 | Msa0094800:CDS | 65.0% |
| !! | ACGACGTCGGCTCTCAAGGG+TGG | - | chr1_2:78154133-78154152 | None:intergenic | 65.0% |
| ACCCTTGAGAGCCGACGTCG+TGG | + | chr1_2:78154132-78154151 | Msa0094800:intron | 65.0% | |
| !! | GCCACGACGTCGGCTCTCAA+GGG | - | chr1_2:78154136-78154155 | None:intergenic | 65.0% |
| !! | TGCCACGACGTCGGCTCTCA+AGG | - | chr1_2:78154137-78154156 | None:intergenic | 65.0% |
| AGGCACAGGTGGAGCTGGAG+GGG | - | chr1_2:78155746-78155765 | None:intergenic | 65.0% | |
| CAGGCACAGGTGGAGCTGGA+GGG | - | chr1_2:78155747-78155766 | None:intergenic | 65.0% | |
| TCAGGCACAGGTGGAGCTGG+AGG | - | chr1_2:78155748-78155767 | None:intergenic | 65.0% | |
| CGTTCAGGCACAGGTGGAGC+TGG | - | chr1_2:78155751-78155770 | None:intergenic | 65.0% | |
| !! | TTTTTGGGGGGGGAGGGGTG+TGG | + | chr1_2:78157778-78157797 | Msa0094800:three_prime_UTR | 65.0% |
| ! | TGGCGTCGGGGCTGAGGGTT+TGG | - | chr1_2:78149075-78149094 | None:intergenic | 70.0% |
| !! | GTTGGTGGCGTCGGGGCTGA+GGG | - | chr1_2:78149080-78149099 | None:intergenic | 70.0% |
| GGAGAGACGGTCGAGCTCGG+CGG | - | chr1_2:78149116-78149135 | None:intergenic | 70.0% | |
| ACAGGTGGAGCTGGAGGGGG+CGG | - | chr1_2:78155742-78155761 | None:intergenic | 70.0% | |
| GGCACAGGTGGAGCTGGAGG+GGG | - | chr1_2:78155745-78155764 | None:intergenic | 70.0% | |
| !! | CGTTGGTGGCGTCGGGGCTG+AGG | - | chr1_2:78149081-78149100 | None:intergenic | 75.0% |
| ACGGTCGAGCTCGGCGGTGG+AGG | - | chr1_2:78149110-78149129 | None:intergenic | 75.0% | |
| GAGACGGTCGAGCTCGGCGG+TGG | - | chr1_2:78149113-78149132 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 78148953 | 78157947 | 78148953 | ID=Msa0094800;Name=Msa0094800 |
| chr1_2 | mRNA | 78148953 | 78157947 | 78148953 | ID=Msa0094800-mRNA-1;Parent=Msa0094800;Name=Msa0094800-mRNA-1;_AED=0.13;_eAED=0.15;_QI=0|0.9|0.85|1|1|1|21|273|1136 |
| chr1_2 | exon | 78148953 | 78149178 | 78148953 | ID=Msa0094800-mRNA-1:exon:27814;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78149264 | 78149439 | 78149264 | ID=Msa0094800-mRNA-1:exon:27815;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78149538 | 78149705 | 78149538 | ID=Msa0094800-mRNA-1:exon:27816;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78150093 | 78150203 | 78150093 | ID=Msa0094800-mRNA-1:exon:27817;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78150284 | 78150361 | 78150284 | ID=Msa0094800-mRNA-1:exon:27818;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78151087 | 78151283 | 78151087 | ID=Msa0094800-mRNA-1:exon:27819;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78151368 | 78151428 | 78151368 | ID=Msa0094800-mRNA-1:exon:27820;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78151721 | 78151795 | 78151721 | ID=Msa0094800-mRNA-1:exon:27821;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78151928 | 78152005 | 78151928 | ID=Msa0094800-mRNA-1:exon:27822;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78152099 | 78152161 | 78152099 | ID=Msa0094800-mRNA-1:exon:27823;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78152233 | 78152316 | 78152233 | ID=Msa0094800-mRNA-1:exon:27824;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78152391 | 78152563 | 78152391 | ID=Msa0094800-mRNA-1:exon:27825;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78153107 | 78153146 | 78153107 | ID=Msa0094800-mRNA-1:exon:27826;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78153237 | 78153380 | 78153237 | ID=Msa0094800-mRNA-1:exon:27827;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78153512 | 78153631 | 78153512 | ID=Msa0094800-mRNA-1:exon:27828;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78153718 | 78153933 | 78153718 | ID=Msa0094800-mRNA-1:exon:27829;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78154722 | 78154904 | 78154722 | ID=Msa0094800-mRNA-1:exon:27830;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78155478 | 78156129 | 78155478 | ID=Msa0094800-mRNA-1:exon:27831;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78156736 | 78157009 | 78156736 | ID=Msa0094800-mRNA-1:exon:27832;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78157092 | 78157228 | 78157092 | ID=Msa0094800-mRNA-1:exon:27833;Parent=Msa0094800-mRNA-1 |
| chr1_2 | exon | 78157520 | 78157947 | 78157520 | ID=Msa0094800-mRNA-1:exon:27834;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78148953 | 78149178 | 78148953 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78149264 | 78149439 | 78149264 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78149538 | 78149705 | 78149538 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78150093 | 78150203 | 78150093 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78150284 | 78150361 | 78150284 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78151087 | 78151283 | 78151087 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78151368 | 78151428 | 78151368 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78151721 | 78151795 | 78151721 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78151928 | 78152005 | 78151928 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78152099 | 78152161 | 78152099 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78152233 | 78152316 | 78152233 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78152391 | 78152563 | 78152391 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78153107 | 78153146 | 78153107 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78153237 | 78153380 | 78153237 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78153512 | 78153631 | 78153512 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78153718 | 78153933 | 78153718 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78154722 | 78154904 | 78154722 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78155478 | 78156129 | 78155478 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78156736 | 78157009 | 78156736 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78157092 | 78157228 | 78157092 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | CDS | 78157520 | 78157674 | 78157520 | ID=Msa0094800-mRNA-1:cds;Parent=Msa0094800-mRNA-1 |
| chr1_2 | three_prime_UTR | 78157675 | 78157947 | 78157675 | ID=Msa0094800-mRNA-1:three_prime_utr;Parent=Msa0094800-mRNA-1 |
| Gene Sequence |
| Protein sequence |