AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0580250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0580250 MtrunA17_Chr4g0039611 98.621 1088 4 1 1 1088 1 1077 0.0 2221
Msa0580250 MtrunA17_Chr5g0395621 90.634 1089 90 2 1 1088 1 1078 0.0 2032
Msa0580250 MtrunA17_Chr8g0340191 81.395 258 48 0 571 828 1 258 3.03e-147 440
Msa0580250 MtrunA17_Chr8g0340181 57.377 305 86 7 247 545 1 267 2.14e-94 301
Msa0580250 MtrunA17_Chr8g0340201 69.856 209 52 1 834 1042 2 199 2.25e-92 293
Msa0580250 MtrunA17_Chr8g0340171 60.294 204 47 1 1 204 1 170 1.30e-71 236
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0580250 AT5G17020.1 85.294 1088 147 2 1 1088 1 1075 0.0 1930
Msa0580250 AT5G17020.2 83.915 1088 147 3 1 1088 1 1060 0.0 1890
Msa0580250 AT3G03110.1 81.985 1088 184 2 1 1088 1 1076 0.0 1846

Find 261 sgRNAs with CRISPR-Local

Find 752 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATAGTCCATTAACAAAT+TGG 0.194943 4_1:+85301661 None:intergenic
TGAAAACATGAATATATATT+AGG 0.200961 4_1:-85300530 Msa0580250:three_prime_UTR
ACAAGTGTTGCATCTTCTTT+AGG 0.217241 4_1:-85303838 Msa0580250:CDS
TGATGTTCTTGTTCAATATA+AGG 0.232496 4_1:-85307722 Msa0580250:intron
CTCATAGTTGAAGATGAAAA+TGG 0.234394 4_1:-85307775 Msa0580250:CDS
GAATATAACAACTTTGCTTT+TGG 0.253627 4_1:-85308782 Msa0580250:CDS
TGTTTACTATTGTAGCAAAA+AGG 0.257518 4_1:+85303308 None:intergenic
CAGGTGGCATCCCTTCAATT+TGG 0.261199 4_1:-85309425 Msa0580250:CDS
AAAATAATATCCTCTCTATT+TGG 0.262760 4_1:+85300611 None:intergenic
GTATCAGGAAATCTCGTATA+TGG 0.269276 4_1:+85301607 None:intergenic
TAAATTGATCGAGACATTCT+TGG 0.269912 4_1:-85303446 Msa0580250:CDS
AGCAAGCAAAAGACCTGATT+TGG 0.273590 4_1:+85304560 None:intergenic
TATTCTCTTGAGTGGATTCC+AGG 0.283589 4_1:+85308800 None:intergenic
CAGGTTACCCAATTTGTTAA+TGG 0.289036 4_1:-85301669 Msa0580250:CDS
GAAGAAAAGGAAAACGTAAT+TGG 0.300431 4_1:+85313247 None:intergenic
CAAAGAATGCTTTCTATTCC+AGG 0.320623 4_1:-85301185 Msa0580250:CDS
CGGAGTGATGATGACTCTTT+AGG 0.322684 4_1:-85300789 Msa0580250:three_prime_UTR
CATCTCCGACATCATTGTTC+AGG 0.324705 4_1:-85311406 Msa0580250:intron
TACCGAGAGCACTTACTATA+TGG 0.330512 4_1:-85300675 Msa0580250:three_prime_UTR
CAAGTGTTGCATCTTCTTTA+GGG 0.333806 4_1:-85303837 Msa0580250:CDS
CACGTATCAGCTCAGCCCTT+TGG 0.340622 4_1:+85309738 None:intergenic
CAGGTATCGGCAATGCTTCC+TGG 0.341710 4_1:-85307910 Msa0580250:CDS
GGAGATGCTGAAGAAGTTTC+AGG 0.344422 4_1:-85302351 Msa0580250:intron
TGCGAACTTGATGGGACTTC+AGG 0.345750 4_1:-85308544 Msa0580250:intron
AATAGGTCTGTTTGGACTAC+TGG 0.348346 4_1:-85308626 Msa0580250:intron
AGGTGGCATCCCTTCAATTT+GGG 0.357467 4_1:-85309424 Msa0580250:CDS
GTTTGAGCCACATCGAAGTT+TGG 0.357770 4_1:-85308583 Msa0580250:CDS
TTGAAAATAATAGGTCTGTT+TGG 0.359269 4_1:-85308634 Msa0580250:intron
AATACACTCTGCTGGGCAAT+TGG 0.360947 4_1:-85307052 Msa0580250:CDS
ACGTATCAGCTCAGCCCTTT+GGG 0.361354 4_1:+85309739 None:intergenic
CATTGCATGCCTTCTTATCA+TGG 0.362756 4_1:-85309703 Msa0580250:CDS
GTGTGCTAACTGAGCCCCTT+TGG 0.363467 4_1:-85301867 Msa0580250:CDS
TTGACCTTTCAGCTGGAAAC+TGG 0.366423 4_1:-85301889 Msa0580250:intron
TAGCTGGTCTGAGTGCTAAT+TGG 0.367437 4_1:+85300504 None:intergenic
GACTGTGCTTAATATATTGC+AGG 0.367551 4_1:-85304355 Msa0580250:intron
GAAAACATGAATATATATTA+GGG 0.369931 4_1:-85300529 Msa0580250:three_prime_UTR
TCAGCAATTGAAGCTTGTTA+TGG 0.371534 4_1:-85302441 Msa0580250:CDS
ATTCAATCATGTGGGCATTT+CGG 0.372536 4_1:-85302418 Msa0580250:CDS
TATATTCATGGGCCAATTGC+AGG 0.373962 4_1:-85309366 Msa0580250:intron
CAGAAATGGATGGAAATTAT+AGG 0.375812 4_1:-85304426 Msa0580250:CDS
AGATTTCGATATGCTGGAAC+TGG 0.377398 4_1:+85309540 None:intergenic
TTCGATGCAGTTCGGTTAAG+AGG 0.380505 4_1:-85303477 Msa0580250:intron
ACCAATGATGGATCCTGTTC+TGG 0.380819 4_1:-85303380 Msa0580250:CDS
ACCTCAGCTGTTGTCATGTT+CGG 0.382138 4_1:+85301760 None:intergenic
GATTATTGATTTACTAATTG+AGG 0.382141 4_1:-85300880 Msa0580250:three_prime_UTR
TTCTTATCATGGATCCCCTT+GGG 0.383666 4_1:-85309692 Msa0580250:CDS
GCTCAACATTATATTAGTTC+AGG 0.386914 4_1:-85311216 Msa0580250:intron
ATAAAGCTTCGCCATCTTGC+TGG 0.392745 4_1:+85311034 None:intergenic
GAGGGAGACTCTTATTTACT+TGG 0.392816 4_1:-85307525 Msa0580250:CDS
TCAACTATGAGAACCTCTTC+GGG 0.394916 4_1:+85307787 None:intergenic
GAAAGGAATATTGCTGAAAC+AGG 0.395957 4_1:-85302389 Msa0580250:CDS
AAGGCGTAATTAAATATAGA+TGG 0.397062 4_1:-85311470 Msa0580250:CDS
CTAGAGATTTGAAGCTAGAA+AGG 0.397708 4_1:+85300572 None:intergenic
ACAATTTGTGCCACCAATGA+TGG 0.397908 4_1:-85303392 Msa0580250:CDS
CAAGATGTATGGTATATTCA+TGG 0.397963 4_1:-85309378 Msa0580250:CDS
AAGAACATCATTGTCCTTCA+AGG 0.398870 4_1:+85307735 None:intergenic
ATGACTTGAAGCCACATATC+AGG 0.399612 4_1:+85312491 None:intergenic
CAGTACCTGCTCTTCTATCA+TGG 0.400683 4_1:+85307015 None:intergenic
TTCAACTATGAGAACCTCTT+CGG 0.400992 4_1:+85307786 None:intergenic
TTTGTATCTGAACTTCTATC+AGG 0.404322 4_1:-85304823 Msa0580250:CDS
TGCACAAACCGCCAGAAGTT+AGG 0.404664 4_1:+85300761 None:intergenic
AAGAACTTAAGCCGGTGCTC+AGG 0.405513 4_1:+85302659 None:intergenic
TGTGCTAACTGAGCCCCTTT+GGG 0.407002 4_1:-85301866 Msa0580250:CDS
TGTTTACTTGACAGATTATG+AGG 0.407197 4_1:-85307544 Msa0580250:intron
ATGCTTCCTGGTATGGTTGA+TGG 0.407442 4_1:-85307898 Msa0580250:CDS
TGGGCAATTGGATCTATATC+TGG 0.409569 4_1:-85307040 Msa0580250:CDS
TGAGACACATCCTGGAGTTC+AGG 0.412850 4_1:-85306006 Msa0580250:intron
ATCTCGCTGCTCGGCAGGTA+AGG 0.415514 4_1:+85311443 None:intergenic
TCCTCTCTATTTGGAGGGAT+GGG 0.418180 4_1:+85300620 None:intergenic
CTTCTTATCATGGATCCCCT+TGG 0.418863 4_1:-85309693 Msa0580250:CDS
TGCAGCTTCTGCGAACTTGA+TGG 0.419691 4_1:-85308553 Msa0580250:CDS
CTTAGATCCAGTGCCGTAGA+AGG 0.421045 4_1:+85312880 None:intergenic
GATCCAAACACACCTGCAAT+TGG 0.423360 4_1:+85309354 None:intergenic
TTAGCCGCTGCGACAAGATC+AGG 0.425401 4_1:+85311010 None:intergenic
TGAAGGATCAAGATGTAATA+CGG 0.426213 4_1:-85304377 Msa0580250:CDS
TGAGTGAGTTTGAAAGAAGA+GGG 0.429009 4_1:+85313199 None:intergenic
TTGCCATGTGCATATGCCTC+GGG 0.433269 4_1:+85309204 None:intergenic
GAGTGTATTCAAATTGTTCC+AGG 0.433903 4_1:+85307066 None:intergenic
ACTGATCTGTTTGTCAAGCC+AGG 0.438397 4_1:-85302597 Msa0580250:intron
TGAATTTCTTCAGCGGTTGA+TGG 0.438441 4_1:-85304588 Msa0580250:CDS
ATTCACTCTACTCTCGCTCT+AGG 0.440316 4_1:-85312998 Msa0580250:five_prime_UTR
TTTAGGTGTGACCTAACTTC+TGG 0.441541 4_1:-85300772 Msa0580250:three_prime_UTR
TCTTTCACTCAGGTTCTTGA+AGG 0.445088 4_1:-85311489 Msa0580250:intron
GTTGATGGAGCTCCCAAATC+AGG 0.445324 4_1:-85304573 Msa0580250:intron
AAATAGTCCATTAACAAATT+GGG 0.445619 4_1:+85301662 None:intergenic
TCAAGATCTGCAATAGTGAT+TGG 0.450448 4_1:+85304796 None:intergenic
AGCTTAAACAATCATTGAAC+AGG 0.451004 4_1:-85310812 Msa0580250:intron
TACTAATTGAGGATTATGTT+GGG 0.451908 4_1:-85300869 Msa0580250:three_prime_UTR
ATCCTCTCTATTTGGAGGGA+TGG 0.452697 4_1:+85300619 None:intergenic
ATCGGCAATGCTTCCTGGTA+TGG 0.453160 4_1:-85307905 Msa0580250:CDS
AGATGAAATGGTGGACTCAT+AGG 0.454147 4_1:-85301138 Msa0580250:intron
GATCGAGACATTCTTGGATA+AGG 0.455063 4_1:-85303440 Msa0580250:CDS
GCATCTCCAACAACAGGTTC+AGG 0.456467 4_1:+85302366 None:intergenic
ACAATTTGAATACACTCTGC+TGG 0.457803 4_1:-85307060 Msa0580250:CDS
CTAGCATAATCTCCCAGAAC+AGG 0.458405 4_1:+85303367 None:intergenic
ACCTCAGATTCCCTTGCATC+AGG 0.459982 4_1:+85303337 None:intergenic
TTTCATCTTGCAACTCGATA+GGG 0.460559 4_1:+85301153 None:intergenic
AATCTCCTCCGAGCGAGTCT+AGG 0.461260 4_1:-85313037 Msa0580250:five_prime_UTR
TGCTTCCTGGTATGGTTGAT+GGG 0.462235 4_1:-85307897 Msa0580250:CDS
TCTTCAGCATCTCCAACAAC+AGG 0.463831 4_1:+85302360 None:intergenic
TCGATAGGGGCAATCAGCCC+TGG 0.464759 4_1:+85301167 None:intergenic
ATTTGTGTTAGGCGGCAGTA+TGG 0.464788 4_1:+85309230 None:intergenic
TATCGAGTTGCAAGATGAAA+TGG 0.464848 4_1:-85301150 Msa0580250:CDS
ATTCCATCTCGCTGCTCGGC+AGG 0.465981 4_1:+85311438 None:intergenic
TTACTAATTGAGGATTATGT+TGG 0.467235 4_1:-85300870 Msa0580250:three_prime_UTR
GCCACCGTCGCCGCCTTCTA+CGG 0.469747 4_1:-85312893 Msa0580250:CDS
TTTATGCATGAGACACATCC+TGG 0.470454 4_1:-85306014 Msa0580250:CDS
AACAGGCCTGAACCTGTTGT+TGG 0.470757 4_1:-85302372 Msa0580250:CDS
CCAATGATGGATCCTGTTCT+GGG 0.470966 4_1:-85303379 Msa0580250:CDS
TCACTCTTCTTCTTCTCCGA+TGG 0.473964 4_1:-85312969 Msa0580250:exon
CCCAGAACAGGATCCATCAT+TGG 0.482264 4_1:+85303379 None:intergenic
CAACCTTTCCGTTCGAAATG+AGG 0.482971 4_1:+85311250 None:intergenic
GCTGAAGATCAACCACAGAT+TGG 0.484039 4_1:-85303418 Msa0580250:CDS
ATCTCCTCCGAGCGAGTCTA+GGG 0.484275 4_1:-85313036 Msa0580250:five_prime_UTR
ATTTCATCTTGCAACTCGAT+AGG 0.485254 4_1:+85301152 None:intergenic
GACGCTACTAAGCTATATAT+AGG 0.486822 4_1:+85313284 None:intergenic
GCAAGCAAAAGACCTGATTT+GGG 0.487434 4_1:+85304561 None:intergenic
CATTGTCCTTCAAGGTTTCA+CGG 0.489746 4_1:+85307743 None:intergenic
GCAGGTTCACATCCGCATCC+TGG 0.490283 4_1:-85308818 Msa0580250:intron
TTTGGACTACTGGAATTCCT+TGG 0.490547 4_1:-85308616 Msa0580250:CDS
GCCTCGGGGATATTTGTGTT+AGG 0.490648 4_1:+85309219 None:intergenic
ATTTACATATCAACAATAGC+TGG 0.491788 4_1:+85300488 None:intergenic
AAGGCATACAGATTCGTAGA+AGG 0.492583 4_1:+85304756 None:intergenic
ATAATATCCTCTCTATTTGG+AGG 0.496349 4_1:+85300614 None:intergenic
AGTTCTGTAATCAGTTCTAC+AGG 0.497293 4_1:-85302094 Msa0580250:CDS
GCAGCTTCTGCGAACTTGAT+GGG 0.497457 4_1:-85308552 Msa0580250:CDS
TGGGTTCAAATTACATGTCC+TGG 0.499157 4_1:-85302009 Msa0580250:CDS
AGCGTAAGATTTCGATATGC+TGG 0.500147 4_1:+85309534 None:intergenic
TTCACTCTACTCTCGCTCTA+GGG 0.501547 4_1:-85312997 Msa0580250:five_prime_UTR
CATCTTATGTGAAACTTCTA+CGG 0.502876 4_1:-85303570 Msa0580250:intron
TCGCTTGATAGGTATGTTGT+TGG 0.504977 4_1:-85306104 Msa0580250:intron
TCGGGGAGAGAGAAGAGTAC+GGG 0.505082 4_1:+85313077 None:intergenic
TCATAGTTGAAGATGAAAAT+GGG 0.505293 4_1:-85307774 Msa0580250:CDS
AGAATAATAGGTATTTATAG+AGG 0.505983 4_1:+85313132 None:intergenic
TATCAGGAAATCTCGTATAT+GGG 0.506963 4_1:+85301608 None:intergenic
AACAACTCAGTGGTGAGGAT+TGG 0.507258 4_1:-85307090 Msa0580250:CDS
AAATGCTGATAAGATATTCA+AGG 0.507542 4_1:+85308758 None:intergenic
CAACGTCGTCAGCTTTATGC+TGG 0.507554 4_1:-85307856 Msa0580250:CDS
GTGAGTGAGTTTGAAAGAAG+AGG 0.508087 4_1:+85313198 None:intergenic
AGATCATTGTGATTTGAGGC+AGG 0.510406 4_1:+85303806 None:intergenic
AGTTGTTATATTCTCTTGAG+TGG 0.513869 4_1:+85308792 None:intergenic
CCTGGTATGGTTGATGGGCA+CGG 0.514902 4_1:-85307892 Msa0580250:CDS
CCATGATGATACTGAAAAGC+AGG 0.516021 4_1:-85307492 Msa0580250:intron
TGGACATGTTGAATGTGTAC+AGG 0.517694 4_1:-85303780 Msa0580250:intron
GTCGCCGCCTTCTACGGCAC+TGG 0.520083 4_1:-85312887 Msa0580250:CDS
ATGAGGTGAAGAACAGCGCC+AGG 0.521707 4_1:+85309070 None:intergenic
CTGAGCTTCTCAGCGGCCAT+CGG 0.521732 4_1:+85312953 None:intergenic
ATCAAGTTCGCAGAAGCTGC+AGG 0.523514 4_1:+85308555 None:intergenic
AGTGAGTTTGAAAGAAGAGG+GGG 0.528376 4_1:+85313201 None:intergenic
ACTCGCACGGAATGAAGAAA+AGG 0.528494 4_1:+85313234 None:intergenic
TGTGCTATCGGCATCCCAAA+GGG 0.529449 4_1:-85309753 Msa0580250:CDS
CAAAGATCTCTATGCTGAAG+AGG 0.531854 4_1:-85301234 Msa0580250:CDS
GCCGTAGAAGGCGGCGACGG+TGG 0.532551 4_1:+85312892 None:intergenic
TATTGTCCGTGAAACCTTGA+AGG 0.534873 4_1:-85307749 Msa0580250:CDS
TGGTTCCATGATAGAAGAGC+AGG 0.535654 4_1:-85307020 Msa0580250:intron
TTCGGGGAGAGAGAAGAGTA+CGG 0.536723 4_1:+85313076 None:intergenic
CAAGGGGATCCATGATAAGA+AGG 0.538201 4_1:+85309694 None:intergenic
GAAGAGAGAAGAACTTAAGC+CGG 0.538221 4_1:+85302651 None:intergenic
ACTTGTAGCAACATCCCAAA+GGG 0.539515 4_1:+85301852 None:intergenic
GATAGAAGTTCAGATACAAA+TGG 0.542603 4_1:+85304826 None:intergenic
GACTTGTAGCAACATCCCAA+AGG 0.543415 4_1:+85301851 None:intergenic
TTAGGCATTTATACAGAACC+TGG 0.546070 4_1:-85309088 Msa0580250:intron
AGCATTCTCAACTTTGACAT+GGG 0.546626 4_1:+85307832 None:intergenic
GGGCATTTCGGCACACAGAA+AGG 0.547271 4_1:-85302406 Msa0580250:CDS
TTTCATTCCATCTCGCTGCT+CGG 0.547958 4_1:+85311434 None:intergenic
CAATTTGAATACACTCTGCT+GGG 0.548023 4_1:-85307059 Msa0580250:CDS
CCGTGCCCATCAACCATACC+AGG 0.548181 4_1:+85307892 None:intergenic
ATGGATGGAAATTATAGGCC+AGG 0.548256 4_1:-85304421 Msa0580250:CDS
CTAGGAATGCTCCTGATGCA+AGG 0.552257 4_1:-85303348 Msa0580250:CDS
AAGATGTATGGTATATTCAT+GGG 0.555548 4_1:-85309377 Msa0580250:CDS
GGGGAACGCTCGCACTCGCA+CGG 0.557084 4_1:+85313221 None:intergenic
TCGATGCAGTTCGGTTAAGA+GGG 0.559242 4_1:-85303476 Msa0580250:intron
TTGAAGATTACCCTGAGCAC+CGG 0.559648 4_1:-85302670 Msa0580250:CDS
GTGCAATATGTCAAGATGTA+TGG 0.559915 4_1:-85309389 Msa0580250:CDS
CTGTTCTGGGAGATTATGCT+AGG 0.561609 4_1:-85303366 Msa0580250:CDS
TGCAAAACAATCCTGATATG+TGG 0.562075 4_1:-85312502 Msa0580250:CDS
CTACTGGAATTCCTTGGTGT+CGG 0.563467 4_1:-85308610 Msa0580250:CDS
CTTGACAAACAGATCAGTGC+AGG 0.563746 4_1:+85302602 None:intergenic
CCCAGGCTTATGAAAAGTAT+CGG 0.564406 4_1:+85302028 None:intergenic
CCTCTCTATTTGGAGGGATG+GGG 0.565359 4_1:+85300621 None:intergenic
TCGAGTAACGGAACATCGAT+CGG 0.565699 4_1:+85312917 None:intergenic
AGGAAAACAATGAGTAGCTA+TGG 0.566018 4_1:+85302622 None:intergenic
GATCTGCAATAGTGATTGGA+AGG 0.567155 4_1:+85304800 None:intergenic
GCGACGGTGGCGTCGAGTAA+CGG 0.567435 4_1:+85312905 None:intergenic
TTCATCTTGCAACTCGATAG+GGG 0.569366 4_1:+85301154 None:intergenic
AAAGAATGCTTTCTATTCCA+GGG 0.571488 4_1:-85301184 Msa0580250:CDS
CTTGAGTGGATTCCAGGATG+CGG 0.572251 4_1:+85308806 None:intergenic
TTATATATTTGAATCACCGT+TGG 0.573963 4_1:-85309669 Msa0580250:intron
GTTATGCTTATATGTGCTAT+CGG 0.574920 4_1:-85309765 Msa0580250:CDS
TTACCTGCCGAGCAGCGAGA+TGG 0.576301 4_1:-85311441 Msa0580250:CDS
AGAACTTAAGCCGGTGCTCA+GGG 0.577552 4_1:+85302660 None:intergenic
AGCATGAGTGGCCAGCAAGA+TGG 0.577675 4_1:-85311045 Msa0580250:CDS
GTAGAAGGAGTGTATCTGAT+GGG 0.578468 4_1:+85304771 None:intergenic
ATTGCCATGTGCATATGCCT+CGG 0.578592 4_1:+85309203 None:intergenic
AACCATATAGTAAGTGCTCT+CGG 0.579003 4_1:+85300673 None:intergenic
TCTCTATGCTGAAGAGGCTG+CGG 0.580599 4_1:-85301228 Msa0580250:CDS
ATGGACAAGTCTATATCCCC+TGG 0.582635 4_1:+85300915 None:intergenic
TCCTGATGCAAGGGAATCTG+AGG 0.583164 4_1:-85303338 Msa0580250:CDS
TTGTTATGGATTCAATCATG+TGG 0.583890 4_1:-85302427 Msa0580250:CDS
ATGTGCTATCGGCATCCCAA+AGG 0.587524 4_1:-85309754 Msa0580250:CDS
GAGTGAGTTTGAAAGAAGAG+GGG 0.588426 4_1:+85313200 None:intergenic
AAAACAAATGCTGAAGCACC+AGG 0.588693 4_1:+85301991 None:intergenic
CGTAGAAGGAGTGTATCTGA+TGG 0.588720 4_1:+85304770 None:intergenic
TGATTCAAATATATAACCCA+AGG 0.590786 4_1:+85309676 None:intergenic
CGTGTAATCTGCAGATGCTG+AGG 0.591084 4_1:-85307123 Msa0580250:intron
TAATATCCTCTCTATTTGGA+GGG 0.596427 4_1:+85300615 None:intergenic
AAGCATTCTCAACTTTGACA+TGG 0.596752 4_1:+85307831 None:intergenic
AGGCCTCATTTCGAACGGAA+AGG 0.600634 4_1:-85311253 Msa0580250:CDS
TAGGAATGCTCCTGATGCAA+GGG 0.607736 4_1:-85303347 Msa0580250:CDS
TGTTATGGATTCAATCATGT+GGG 0.609757 4_1:-85302426 Msa0580250:CDS
AGTGCCGTAGAAGGCGGCGA+CGG 0.612587 4_1:+85312889 None:intergenic
GTTTACTTGACAGATTATGA+GGG 0.612625 4_1:-85307543 Msa0580250:intron
TCGGGGATATTTGTGTTAGG+CGG 0.615711 4_1:+85309222 None:intergenic
CGGCTCAGAGAGAAAGAGAA+CGG 0.616816 4_1:-85301208 Msa0580250:CDS
GATTCAAATATATAACCCAA+GGG 0.617377 4_1:+85309677 None:intergenic
GGCATGCAATGTAGATAGTG+TGG 0.618242 4_1:+85309715 None:intergenic
AAGAGTCATCATCACTCCGA+AGG 0.619001 4_1:+85300793 None:intergenic
GATTTCGATATGCTGGAACT+GGG 0.620969 4_1:+85309541 None:intergenic
ATCCCCGAGGCATATGCACA+TGG 0.622830 4_1:-85309207 Msa0580250:CDS
AATCTATGTGAAATCACGAA+GGG 0.623585 4_1:-85306237 Msa0580250:CDS
GTGAGTTTGAAAGAAGAGGG+GGG 0.626996 4_1:+85313202 None:intergenic
CCCCATCCCTCCAAATAGAG+AGG 0.629051 4_1:-85300621 Msa0580250:three_prime_UTR
AATAATCTACACTCACCACA+TGG 0.630833 4_1:+85300896 None:intergenic
AACAATGAGTAGCTATGGCG+CGG 0.631317 4_1:+85302627 None:intergenic
GTTTGTGCAGAAAACCCTTG+TGG 0.633463 4_1:-85300747 Msa0580250:three_prime_UTR
AGAGAGATGAATTTCTTCAG+CGG 0.635384 4_1:-85304595 Msa0580250:CDS
AGGTGTGACCTAACTTCTGG+CGG 0.636299 4_1:-85300769 Msa0580250:three_prime_UTR
AATGCTTATGATCTGTCGAA+TGG 0.640679 4_1:-85307815 Msa0580250:CDS
AGATCCAGTGCCGTAGAAGG+CGG 0.642341 4_1:+85312883 None:intergenic
AAGTAAACAACTCAGTGGTG+AGG 0.642832 4_1:-85307095 Msa0580250:CDS
TAATACCTGAACAATGATGT+CGG 0.643354 4_1:+85311401 None:intergenic
CAACGAGGCCTCATTTCGAA+CGG 0.643519 4_1:-85311258 Msa0580250:CDS
TATTCCTGATCTTGTCGCAG+CGG 0.643593 4_1:-85311014 Msa0580250:CDS
AGAACAGGATCCATCATTGG+TGG 0.644463 4_1:+85303382 None:intergenic
TCCGAACATGACAACAGCTG+AGG 0.645401 4_1:-85301761 Msa0580250:intron
TCGAATGGCTAAACCCGAAG+AGG 0.647046 4_1:-85307800 Msa0580250:CDS
AGGACATGTAATTTGAACCC+AGG 0.648020 4_1:+85302011 None:intergenic
GCATTACTTGGGTATGACTG+TGG 0.648596 4_1:+85301829 None:intergenic
CGGCACTGGATCTAAGCAAG+AGG 0.649693 4_1:-85312873 Msa0580250:intron
TCAGTGGTGAGGATTGGACC+TGG 0.651890 4_1:-85307084 Msa0580250:CDS
CTCAAACAGCTCCGACACCA+AGG 0.652968 4_1:+85308599 None:intergenic
AAATCTATGTGAAATCACGA+AGG 0.654119 4_1:-85306238 Msa0580250:CDS
CGAGTTGCAAGATGAAATGG+TGG 0.657463 4_1:-85301147 Msa0580250:CDS
CGGGGAGAGAGAAGAGTACG+GGG 0.658890 4_1:+85313078 None:intergenic
TAGAAGGAGTGTATCTGATG+GGG 0.661038 4_1:+85304772 None:intergenic
TACGCTGCAATGTTTAACAG+AGG 0.663731 4_1:-85309517 Msa0580250:intron
TGCATAGCTTTCTAGCAACG+AGG 0.670460 4_1:-85311273 Msa0580250:intron
TGCCATGTGCATATGCCTCG+GGG 0.678438 4_1:+85309205 None:intergenic
AACGATCTGTGAGAATTGCA+TGG 0.684162 4_1:-85310978 Msa0580250:CDS
ATACAAAATATAAAACCACA+AGG 0.688621 4_1:+85300732 None:intergenic
GGGATATAGACTTGTCCATG+TGG 0.697397 4_1:-85300911 Msa0580250:three_prime_UTR
GCGTAAGTTTGTGATCACCC+AGG 0.698935 4_1:-85304951 Msa0580250:intron
GGATTATCCAAACTTCGATG+TGG 0.699508 4_1:+85308576 None:intergenic
ATTCAAATATATAACCCAAG+GGG 0.700367 4_1:+85309678 None:intergenic
AAAACGGCTTCAAATATGCG+AGG 0.702127 4_1:+85303093 None:intergenic
TACAAAATATAAAACCACAA+GGG 0.707514 4_1:+85300733 None:intergenic
AAATTAAGTAAACAACTCAG+TGG 0.731890 4_1:-85307100 Msa0580250:CDS
CTTGTAGCAACATCCCAAAG+GGG 0.739875 4_1:+85301853 None:intergenic
GCCTAACACAAATATCCCCG+AGG 0.742982 4_1:-85309220 Msa0580250:CDS
AAAACCCTAGACTCGCTCGG+AGG 0.756554 4_1:+85313032 None:intergenic
CAAATCTCTGAGCTTCTCAG+CGG 0.769266 4_1:+85312946 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTAGTTAAGAATAAT+AGG + chr4_1:85300664-85300683 None:intergenic 10.0%
!!! TTACGTAAAAAAATAATTTT+TGG - chr4_1:85303361-85303380 Msa0580250:CDS 10.0%
!!! TAATATTACATTACATTTTT+AGG + chr4_1:85306546-85306565 None:intergenic 10.0%
!! ACAAATATTAAAAAAAAAGT+TGG + chr4_1:85308489-85308508 None:intergenic 10.0%
!!! TAATTTTTAATTCTTTTTTC+TGG - chr4_1:85308566-85308585 Msa0580250:CDS 10.0%
!!! AAATTTCATTTAATGTTTTA+TGG - chr4_1:85309511-85309530 Msa0580250:intron 10.0%
!! TGAACATAAAAAATAAAAAA+AGG + chr4_1:85310514-85310533 None:intergenic 10.0%
!! AACATAATCTAATGAAAAAT+GGG + chr4_1:85302850-85302869 None:intergenic 15.0%
!! AAACATAATCTAATGAAAAA+TGG + chr4_1:85302851-85302870 None:intergenic 15.0%
!! TAAATGGTAAAATTTAACAA+CGG + chr4_1:85303623-85303642 None:intergenic 15.0%
!!! ATCAGTTTTAAATTTATTGT+TGG - chr4_1:85306381-85306400 Msa0580250:intron 15.0%
!!! TCAGTTTTAAATTTATTGTT+GGG - chr4_1:85306382-85306401 Msa0580250:intron 15.0%
!! TGTTCAAAAAAAATTATTGT+CGG - chr4_1:85306410-85306429 Msa0580250:intron 15.0%
!! ATATCAACTTTCTTTAAATA+TGG - chr4_1:85306491-85306510 Msa0580250:intron 15.0%
!!! AGATTTGTTATTGTAAATTT+TGG - chr4_1:85307151-85307170 Msa0580250:intron 15.0%
!! ATGATAAATAATATCATTAG+AGG + chr4_1:85307847-85307866 None:intergenic 15.0%
!!! ATTAATACTACAAATTTTCT+TGG - chr4_1:85308249-85308268 Msa0580250:intron 15.0%
!! TGTGTATAACTATTATTAAA+GGG + chr4_1:85308443-85308462 None:intergenic 15.0%
!! TTGTGTATAACTATTATTAA+AGG + chr4_1:85308444-85308463 None:intergenic 15.0%
!!! TATTTTTATATGAATTCAAG+AGG + chr4_1:85308889-85308908 None:intergenic 15.0%
!! ATGAAATTTCAAAATTCAAA+TGG + chr4_1:85309500-85309519 None:intergenic 15.0%
!!! ATTTCTAAAAGTATTTTAGA+AGG - chr4_1:85310168-85310187 Msa0580250:intron 15.0%
!!! TTTCTAAAAGTATTTTAGAA+GGG - chr4_1:85310169-85310188 Msa0580250:intron 15.0%
!! TCGAAAAGAATAAATAAAAA+GGG + chr4_1:85310289-85310308 None:intergenic 15.0%
!! ATCGAAAAGAATAAATAAAA+AGG + chr4_1:85310290-85310309 None:intergenic 15.0%
!! AACTAAATATTCAAATCAAA+GGG + chr4_1:85310837-85310856 None:intergenic 15.0%
!! AAACTAAATATTCAAATCAA+AGG + chr4_1:85310838-85310857 None:intergenic 15.0%
!! ATATATAAAATGATATATGC+AGG + chr4_1:85311633-85311652 None:intergenic 15.0%
!! ATTTATATTTCAATATGTAC+TGG + chr4_1:85312334-85312353 None:intergenic 15.0%
!!! TCTTTCCAATATTTTATATT+GGG - chr4_1:85312801-85312820 Msa0580250:intron 15.0%
!! TGAAAACATGAATATATATT+AGG - chr4_1:85313251-85313270 Msa0580250:five_prime_UTR 15.0%
!! GAAAACATGAATATATATTA+GGG - chr4_1:85313252-85313271 Msa0580250:five_prime_UTR 15.0%
!! GTAAAAAATGAAGAGAAAAA+AGG + chr4_1:85300630-85300649 None:intergenic 20.0%
!! AGAATAATAGGTATTTATAG+AGG + chr4_1:85300652-85300671 None:intergenic 20.0%
!! TCAATTATTATCAACAACAT+TGG + chr4_1:85301101-85301120 None:intergenic 20.0%
!!! GTATTCGTATTTGTTTTATA+TGG - chr4_1:85302120-85302139 Msa0580250:intron 20.0%
!! TAAAAAACATGTACTAAGAA+AGG + chr4_1:85302261-85302280 None:intergenic 20.0%
!! TAGGAATTATCACTAAAAAA+TGG - chr4_1:85303416-85303435 Msa0580250:CDS 20.0%
!! AATTATCAGAACTTAAAAGA+TGG + chr4_1:85304296-85304315 None:intergenic 20.0%
!! ATAAAAATTCCCAAATTGAA+GGG + chr4_1:85304369-85304388 None:intergenic 20.0%
!! AAATCTAACCTTAAAAAATG+AGG + chr4_1:85304731-85304750 None:intergenic 20.0%
!!! AATATAACAACTTTGCTTTT+GGG - chr4_1:85305000-85305019 Msa0580250:intron 20.0%
!! TGAATGTTAAAATCAAGAAT+TGG - chr4_1:85305287-85305306 Msa0580250:intron 20.0%
!! GCACTTAATAAATTTGAAAA+TGG + chr4_1:85305666-85305685 None:intergenic 20.0%
!! TTTCAAATTTATTAAGTGCA+TGG - chr4_1:85305667-85305686 Msa0580250:intron 20.0%
!! TTTAGTATAAATATTGGTCA+TGG + chr4_1:85305709-85305728 None:intergenic 20.0%
!!! TCTTTTCTTATTTCTAACAA+AGG - chr4_1:85305802-85305821 Msa0580250:intron 20.0%
!! TAAAAGTAGAATATGCAAAA+GGG + chr4_1:85306164-85306183 None:intergenic 20.0%
!! ATAAAAGTAGAATATGCAAA+AGG + chr4_1:85306165-85306184 None:intergenic 20.0%
!! GTTCAAAAAAAATTATTGTC+GGG - chr4_1:85306411-85306430 Msa0580250:intron 20.0%
!!! TTTAAAGAAAGTTGATATTG+TGG + chr4_1:85306489-85306508 None:intergenic 20.0%
!!! AAAGATTGATTCTGTTATTA+TGG + chr4_1:85307011-85307030 None:intergenic 20.0%
!! TACTAAAACTGATAAAACAA+TGG + chr4_1:85307441-85307460 None:intergenic 20.0%
!!! GTATTTTATTTCCCTATTTA+TGG - chr4_1:85307458-85307477 Msa0580250:intron 20.0%
!! GGTTAATCATATTCAAATTA+TGG + chr4_1:85307934-85307953 None:intergenic 20.0%
!!! TTTTGACTTGTTATTCATTA+CGG - chr4_1:85307958-85307977 Msa0580250:intron 20.0%
!! TCTTGTCAAAATTTCTATAT+AGG + chr4_1:85308019-85308038 None:intergenic 20.0%
!!! TAGAGACAATTTTTTTCAAT+AGG + chr4_1:85308169-85308188 None:intergenic 20.0%
!! GAAATAATTGATGAGTTTAA+TGG - chr4_1:85308321-85308340 Msa0580250:intron 20.0%
!! TAATATTTGTGAAATATGCA+AGG - chr4_1:85308499-85308518 Msa0580250:intron 20.0%
!! TTACAAGGTAAATATAGATT+AGG + chr4_1:85308658-85308677 None:intergenic 20.0%
!! TAACTTACAAGAACAAATAT+AGG + chr4_1:85309111-85309130 None:intergenic 20.0%
!! GTTATATTGTTGAAAATTGT+AGG - chr4_1:85309127-85309146 Msa0580250:intron 20.0%
!! CAGACATTAATTATAATACT+TGG + chr4_1:85309312-85309331 None:intergenic 20.0%
!!! TCAAAATGTTGATTTTTTGA+AGG - chr4_1:85309387-85309406 Msa0580250:CDS 20.0%
!!! TCATTTTTTATGTAATTTCG+TGG - chr4_1:85309457-85309476 Msa0580250:intron 20.0%
!!! TTTTGTTGTATTTACATAGT+TGG - chr4_1:85309651-85309670 Msa0580250:intron 20.0%
!! ATGTTTGAACAATTAACAAT+GGG + chr4_1:85309751-85309770 None:intergenic 20.0%
!! TTAATTGTTCAAACATCTAA+GGG - chr4_1:85309755-85309774 Msa0580250:CDS 20.0%
!!! TTCTAAAAGTATTTTAGAAG+GGG - chr4_1:85310170-85310189 Msa0580250:intron 20.0%
!! TTTATGTTCATTTATTTCCT+TGG - chr4_1:85310524-85310543 Msa0580250:intron 20.0%
!!! AAAATAATATCAGTCTTGTA+TGG - chr4_1:85310861-85310880 Msa0580250:CDS 20.0%
!!! ACTTGATGACAAATAATTAT+TGG - chr4_1:85311014-85311033 Msa0580250:CDS 20.0%
!!! CTTGATGACAAATAATTATT+GGG - chr4_1:85311015-85311034 Msa0580250:CDS 20.0%
!! AAATAGTCCATTAACAAATT+GGG + chr4_1:85312122-85312141 None:intergenic 20.0%
!! ATACAATCAAACAATTTACA+AGG + chr4_1:85312434-85312453 None:intergenic 20.0%
!! ATATAAAATATTGGAAAGAG+AGG + chr4_1:85312800-85312819 None:intergenic 20.0%
!!! CTCTTTCCAATATTTTATAT+TGG - chr4_1:85312800-85312819 Msa0580250:intron 20.0%
!!! GATTATTGATTTACTAATTG+AGG - chr4_1:85312901-85312920 Msa0580250:CDS 20.0%
!!! ATTTTTGTTCAATACAAAGA+TGG + chr4_1:85312960-85312979 None:intergenic 20.0%
!! ATCTTTGTATTGAACAAAAA+TGG - chr4_1:85312959-85312978 Msa0580250:exon 20.0%
!! TACAAAATATAAAACCACAA+GGG + chr4_1:85313051-85313070 None:intergenic 20.0%
!! ATACAAAATATAAAACCACA+AGG + chr4_1:85313052-85313071 None:intergenic 20.0%
!!! TTTTCCTTCAATTGATTTTT+AGG - chr4_1:85313073-85313092 Msa0580250:five_prime_UTR 20.0%
!!! TTTCCTTCAATTGATTTTTA+GGG - chr4_1:85313074-85313093 Msa0580250:five_prime_UTR 20.0%
!! AAAATAATATCCTCTCTATT+TGG + chr4_1:85313173-85313192 None:intergenic 20.0%
!! AATGAATTACACGCATTTTA+GGG - chr4_1:85300979-85300998 Msa0580250:intron 25.0%
!!! TTGTTGGATTTTTGGATTTA+CGG - chr4_1:85301389-85301408 Msa0580250:intron 25.0%
! ACAACGACAAAAATTACTAT+CGG + chr4_1:85301478-85301497 None:intergenic 25.0%
!!! AAGCTATCTTTTCAAGATAT+TGG + chr4_1:85301678-85301697 None:intergenic 25.0%
! AAGGCGTAATTAAATATAGA+TGG - chr4_1:85302311-85302330 Msa0580250:intron 25.0%
! AAAGTAATGTTAAGAAACTG+CGG + chr4_1:85302597-85302616 None:intergenic 25.0%
! ATCATTGAACTATAAGTTTC+AGG + chr4_1:85302636-85302655 None:intergenic 25.0%
!! ACTGAACTTGTTTATAGAAA+AGG + chr4_1:85302674-85302693 None:intergenic 25.0%
! AAGGTATAAAAGATCTTAAG+AGG + chr4_1:85302697-85302716 None:intergenic 25.0%
! TCAAAATCTGCTTATAGAAA+AGG + chr4_1:85302716-85302735 None:intergenic 25.0%
! TAACTAAAACTCAATCTTTC+AGG + chr4_1:85303029-85303048 None:intergenic 25.0%
!!! TGTACAGTAATGGATTTATA+AGG - chr4_1:85303054-85303073 Msa0580250:intron 25.0%
!!! TGTGATGGTCTATAATTTTT+TGG - chr4_1:85303099-85303118 Msa0580250:CDS 25.0%
!!! GTGATGGTCTATAATTTTTT+GGG - chr4_1:85303100-85303119 Msa0580250:CDS 25.0%
! GTTGGAAAATATATTGTAGT+TGG - chr4_1:85303227-85303246 Msa0580250:intron 25.0%
!! TATTGTAGTTGGTATTAGTA+TGG - chr4_1:85303238-85303257 Msa0580250:intron 25.0%
! CAAATACTCTTATAGATGAT+CGG - chr4_1:85303322-85303341 Msa0580250:CDS 25.0%
!! GGAAAATCATTTTCTAATCT+AGG - chr4_1:85303397-85303416 Msa0580250:CDS 25.0%
! ATGTAATCTGAATTCTTGTA+AGG - chr4_1:85303777-85303796 Msa0580250:intron 25.0%
! ATTCAAATATATAACCCAAG+GGG + chr4_1:85304106-85304125 None:intergenic 25.0%
! GATTCAAATATATAACCCAA+GGG + chr4_1:85304107-85304126 None:intergenic 25.0%
! TGATTCAAATATATAACCCA+AGG + chr4_1:85304108-85304127 None:intergenic 25.0%
! TTATATATTTGAATCACCGT+TGG - chr4_1:85304112-85304131 Msa0580250:intron 25.0%
!!! ATATTCACTTTTATGTTTGC+AGG - chr4_1:85304337-85304356 Msa0580250:intron 25.0%
! CATAAAAATTCCCAAATTGA+AGG + chr4_1:85304370-85304389 None:intergenic 25.0%
! AAGATGTATGGTATATTCAT+GGG - chr4_1:85304404-85304423 Msa0580250:CDS 25.0%
!! AAGTAAGTTTTTACTGAAAC+AGG - chr4_1:85304611-85304630 Msa0580250:CDS 25.0%
! AATATTAGATCCTGCATTAT+TGG - chr4_1:85304883-85304902 Msa0580250:intron 25.0%
! ATATTAGATCCTGCATTATT+GGG - chr4_1:85304884-85304903 Msa0580250:intron 25.0%
!! GAATATAACAACTTTGCTTT+TGG - chr4_1:85304999-85305018 Msa0580250:intron 25.0%
! AAATGCTGATAAGATATTCA+AGG + chr4_1:85305026-85305045 None:intergenic 25.0%
!!! TCTGGTTTGTTGAAAATAAT+AGG - chr4_1:85305138-85305157 Msa0580250:intron 25.0%
! TTGAAAATAATAGGTCTGTT+TGG - chr4_1:85305147-85305166 Msa0580250:intron 25.0%
!!! TGAGACAAATGTTTTAATAG+GGG + chr4_1:85305325-85305344 None:intergenic 25.0%
!!! GTGAGACAAATGTTTTAATA+GGG + chr4_1:85305326-85305345 None:intergenic 25.0%
!!! TGTGAGACAAATGTTTTAAT+AGG + chr4_1:85305327-85305346 None:intergenic 25.0%
! TCTGTTTAGCATGTTATTAT+TGG - chr4_1:85305429-85305448 Msa0580250:intron 25.0%
! AAAAAACAAAGATCAAGTCA+AGG + chr4_1:85305571-85305590 None:intergenic 25.0%
!!! TGACTTGATCTTTGTTTTTT+TGG - chr4_1:85305571-85305590 Msa0580250:intron 25.0%
!!! TTTCTTATTTCTAACAAAGG+TGG - chr4_1:85305805-85305824 Msa0580250:intron 25.0%
! TCATAGTTGAAGATGAAAAT+GGG - chr4_1:85306007-85306026 Msa0580250:CDS 25.0%
! TGATGTTCTTGTTCAATATA+AGG - chr4_1:85306059-85306078 Msa0580250:CDS 25.0%
! ATAATCTGTCAAGTAAACAT+TGG + chr4_1:85306236-85306255 None:intergenic 25.0%
!!! GTTTTAAATTTATTGTTGGG+AGG - chr4_1:85306385-85306404 Msa0580250:intron 25.0%
!! TATGAACGAATATGTTGTTT+CGG - chr4_1:85306566-85306585 Msa0580250:intron 25.0%
! AAATTAAGTAAACAACTCAG+TGG - chr4_1:85306681-85306700 Msa0580250:intron 25.0%
! ATAACAAATCTTATAACAGC+AGG + chr4_1:85307142-85307161 None:intergenic 25.0%
! AGATATTATTGAAGTCAACA+TGG + chr4_1:85307183-85307202 None:intergenic 25.0%
! TGACTTCAATAATATCTTGA+TGG - chr4_1:85307186-85307205 Msa0580250:intron 25.0%
!! AGGAAGTATAACCATAAATA+GGG + chr4_1:85307472-85307491 None:intergenic 25.0%
!! AAGGAAGTATAACCATAAAT+AGG + chr4_1:85307473-85307492 None:intergenic 25.0%
! TGAATAACAAGTCAAAATTC+AGG + chr4_1:85307955-85307974 None:intergenic 25.0%
!! TATAAGTTAGCTTATTGAGA+TGG + chr4_1:85308081-85308100 None:intergenic 25.0%
! TAATGAGGAAACTTTATCTT+GGG + chr4_1:85308392-85308411 None:intergenic 25.0%
!!! TAATTCTTTTTTCTGGCAAT+TGG - chr4_1:85308573-85308592 Msa0580250:CDS 25.0%
!!! AATTCTTTTTTCTGGCAATT+GGG - chr4_1:85308574-85308593 Msa0580250:CDS 25.0%
! AAGGTAAATATAGATTAGGA+TGG + chr4_1:85308654-85308673 None:intergenic 25.0%
! TATCCTAAAACAAATGAAAC+AGG + chr4_1:85308770-85308789 None:intergenic 25.0%
!!! GTTTCATTTGTTTTAGGATA+TGG - chr4_1:85308770-85308789 Msa0580250:CDS 25.0%
! TTATATGAATTCAAGAGGAT+AGG + chr4_1:85308884-85308903 None:intergenic 25.0%
!! ATGAGTTTAAGACTTCTATA+AGG + chr4_1:85309047-85309066 None:intergenic 25.0%
! ACAACAAAAGATTTCTAACA+AGG + chr4_1:85309640-85309659 None:intergenic 25.0%
! GATGTTTGAACAATTAACAA+TGG + chr4_1:85309752-85309771 None:intergenic 25.0%
! GTTAATTGTTCAAACATCTA+AGG - chr4_1:85309754-85309773 Msa0580250:CDS 25.0%
! AAAACCAACAAAAAAATCAG+AGG + chr4_1:85309805-85309824 None:intergenic 25.0%
! AAAAAGATCATTGTGATTTG+AGG + chr4_1:85309982-85310001 None:intergenic 25.0%
!! TCAAATCACAATGATCTTTT+TGG - chr4_1:85309981-85310000 Msa0580250:intron 25.0%
!! TTGATTTGATTCTTCATTTC+TGG - chr4_1:85310090-85310109 Msa0580250:intron 25.0%
!!! TCTAAAAGTATTTTAGAAGG+GGG - chr4_1:85310171-85310190 Msa0580250:intron 25.0%
!!! TAAGATGTTTTAGATGCATA+AGG + chr4_1:85310198-85310217 None:intergenic 25.0%
! GTTTACTATTGTAGCAAAAA+GGG + chr4_1:85310475-85310494 None:intergenic 25.0%
! TGTTTACTATTGTAGCAAAA+AGG + chr4_1:85310476-85310495 None:intergenic 25.0%
! ATGAATATCATATAACCCTT+AGG + chr4_1:85310601-85310620 None:intergenic 25.0%
!!! AATCATTGTAGCTTTATATC+TGG + chr4_1:85310659-85310678 None:intergenic 25.0%
!!! GCATTTAGTTTTGTTTTTTC+TGG - chr4_1:85310932-85310951 Msa0580250:intron 25.0%
!!! TAGTTCAGTTGATATTTTAC+AGG + chr4_1:85311048-85311067 None:intergenic 25.0%
! ATGCTTCTTTCAAAACAAAA+AGG + chr4_1:85311506-85311525 None:intergenic 25.0%
!! GGAAAAAACTTTGTTATGAA+TGG + chr4_1:85311607-85311626 None:intergenic 25.0%
!!! TGAATGTCTTATTTACAACA+GGG - chr4_1:85311659-85311678 Msa0580250:intron 25.0%
! CAAATAGTCCATTAACAAAT+TGG + chr4_1:85312123-85312142 None:intergenic 25.0%
!!! AAAATTCTTTTGACTGTATC+AGG + chr4_1:85312192-85312211 None:intergenic 25.0%
!!! AGAAGTTAATTTTAATACCG+TGG - chr4_1:85312681-85312700 Msa0580250:intron 25.0%
!!! GAAGTTAATTTTAATACCGT+GGG - chr4_1:85312682-85312701 Msa0580250:intron 25.0%
!!! TGCTAATTGATTTTGAATGA+AGG + chr4_1:85312731-85312750 None:intergenic 25.0%
! TCAGTCCCAATATAAAATAT+TGG + chr4_1:85312809-85312828 None:intergenic 25.0%
! TTACTAATTGAGGATTATGT+TGG - chr4_1:85312911-85312930 Msa0580250:CDS 25.0%
! TACTAATTGAGGATTATGTT+GGG - chr4_1:85312912-85312931 Msa0580250:CDS 25.0%
!!! TTCCTTCAATTGATTTTTAG+GGG - chr4_1:85313075-85313094 Msa0580250:five_prime_UTR 25.0%
! ATTTACATATCAACAATAGC+TGG + chr4_1:85313296-85313315 None:intergenic 25.0%
GAAGAAAAGGAAAACGTAAT+TGG + chr4_1:85300537-85300556 None:intergenic 30.0%
! CAATGAATTACACGCATTTT+AGG - chr4_1:85300978-85300997 Msa0580250:intron 30.0%
! AGATAATGTGATGCTGTTTA+CGG - chr4_1:85301161-85301180 Msa0580250:CDS 30.0%
!!! TTTGCTGTTTTTTGTGTGTT+TGG - chr4_1:85301188-85301207 Msa0580250:CDS 30.0%
CGGTTACCTACAAAATATTA+CGG - chr4_1:85301409-85301428 Msa0580250:intron 30.0%
! TTGAAGCCGTAATATTTTGT+AGG + chr4_1:85301418-85301437 None:intergenic 30.0%
! CTATGTGGAAAGAACATTTT+TGG + chr4_1:85301845-85301864 None:intergenic 30.0%
!! CAAATGAGTATTGAGTCAAT+GGG + chr4_1:85301882-85301901 None:intergenic 30.0%
ATAACCAAATATCGAGTCAA+CGG + chr4_1:85301991-85302010 None:intergenic 30.0%
TTTGCTGAAATTTCCTTTAG+AGG - chr4_1:85302022-85302041 Msa0580250:CDS 30.0%
TAATACCTGAACAATGATGT+CGG + chr4_1:85302383-85302402 None:intergenic 30.0%
! TTCATAGTTTTTCTACATCC+TGG - chr4_1:85302465-85302484 Msa0580250:CDS 30.0%
GCTCAACATTATATTAGTTC+AGG - chr4_1:85302565-85302584 Msa0580250:intron 30.0%
!!! GAGGTTTTTGATTTTTCAAG+AGG - chr4_1:85302920-85302939 Msa0580250:intron 30.0%
AGCTTAAACAATCATTGAAC+AGG - chr4_1:85302969-85302988 Msa0580250:intron 30.0%
!! AGTTACTTGTTGTACAGTAA+TGG - chr4_1:85303044-85303063 Msa0580250:intron 30.0%
TTATAGACCATCACATGTTA+GGG + chr4_1:85303094-85303113 None:intergenic 30.0%
ATTATAGACCATCACATGTT+AGG + chr4_1:85303095-85303114 None:intergenic 30.0%
TAGATTGAAATACTAGCAAG+TGG - chr4_1:85303152-85303171 Msa0580250:intron 30.0%
!!! ATTTTTGGCAAGTTACATAG+AGG - chr4_1:85303376-85303395 Msa0580250:CDS 30.0%
TTGTACCTGTATCTACTTAT+TGG - chr4_1:85303543-85303562 Msa0580250:intron 30.0%
TTAAGCCAATAAGTAGATAC+AGG + chr4_1:85303551-85303570 None:intergenic 30.0%
GATATCAAAGACACATACAA+AGG + chr4_1:85303673-85303692 None:intergenic 30.0%
CTTTCAGGAAAACTATAACA+AGG + chr4_1:85303806-85303825 None:intergenic 30.0%
! ATTTCACTAAGCATTGTACT+TGG - chr4_1:85303962-85303981 Msa0580250:intron 30.0%
GTTATGCTTATATGTGCTAT+CGG - chr4_1:85304016-85304035 Msa0580250:intron 30.0%
CAAGATGTATGGTATATTCA+TGG - chr4_1:85304403-85304422 Msa0580250:CDS 30.0%
TGTATAAATGCCTAAACAGA+GGG + chr4_1:85304688-85304707 None:intergenic 30.0%
!!! GTTCTTCACCTCATTTTTTA+AGG - chr4_1:85304720-85304739 Msa0580250:intron 30.0%
ACAAAGTTCAATCATGTCAT+TGG + chr4_1:85304795-85304814 None:intergenic 30.0%
GATTGAACTTTGTTAGAATG+TGG - chr4_1:85304802-85304821 Msa0580250:CDS 30.0%
ATATAGTCTATGCAGCTTAA+AGG + chr4_1:85304845-85304864 None:intergenic 30.0%
CATAGACTATATCATACTTG+TGG - chr4_1:85304853-85304872 Msa0580250:intron 30.0%
AGTTGTTATATTCTCTTGAG+TGG + chr4_1:85304992-85305011 None:intergenic 30.0%
! TGACGATACTGAAGTTTTTA+AGG - chr4_1:85305053-85305072 Msa0580250:intron 30.0%
!!! GAGACAAATGTTTTAATAGG+GGG + chr4_1:85305324-85305343 None:intergenic 30.0%
AAGCATTCTATTAAGATGCT+AGG + chr4_1:85305358-85305377 None:intergenic 30.0%
TTGTGAACATTAAGGACAAA+AGG + chr4_1:85305398-85305417 None:intergenic 30.0%
ATAACATGCTAAACAGATAG+TGG + chr4_1:85305426-85305445 None:intergenic 30.0%
ATAAGCAAAACTTAGAGACT+AGG + chr4_1:85305536-85305555 None:intergenic 30.0%
!!! CAATTTTAAAGCATGTTCTG+TGG - chr4_1:85305604-85305623 Msa0580250:intron 30.0%
TCATATAGCATGAAGATATG+TGG + chr4_1:85305638-85305657 None:intergenic 30.0%
CATATCTTCATGCTATATGA+AGG - chr4_1:85305638-85305657 Msa0580250:intron 30.0%
! TTTTTCTTAATCGAGTAAGC+AGG - chr4_1:85305852-85305871 Msa0580250:intron 30.0%
CTCATAGTTGAAGATGAAAA+TGG - chr4_1:85306006-85306025 Msa0580250:intron 30.0%
TGTTTACTTGACAGATTATG+AGG - chr4_1:85306237-85306256 Msa0580250:CDS 30.0%
GTTTACTTGACAGATTATGA+GGG - chr4_1:85306238-85306257 Msa0580250:CDS 30.0%
GGAAAGACAATCACATTATA+TGG - chr4_1:85306348-85306367 Msa0580250:intron 30.0%
AGGTGCAACAAATTTATGAT+AGG + chr4_1:85306619-85306638 None:intergenic 30.0%
GATTCGAGACGATTTAATAA+AGG + chr4_1:85306639-85306658 None:intergenic 30.0%
!! CACAGGTCATTTTCAATATT+AGG - chr4_1:85306832-85306851 Msa0580250:intron 30.0%
CAAGTTAGTTACAAGTTGTT+AGG + chr4_1:85306930-85306949 None:intergenic 30.0%
! TGAGTTTCTCTTTTCCTAAT+AGG - chr4_1:85307068-85307087 Msa0580250:CDS 30.0%
AAGCTCTACATATTCCTATT+AGG + chr4_1:85307085-85307104 None:intergenic 30.0%
! TTGAGGTATTTCCACTATTT+GGG - chr4_1:85307113-85307132 Msa0580250:intron 30.0%
! CAATAATATCTTGATGGCAT+TGG - chr4_1:85307192-85307211 Msa0580250:intron 30.0%
AAGACATTATATGACATCCA+AGG + chr4_1:85307224-85307243 None:intergenic 30.0%
! TCCTCCAATTTAACTTCTAT+TGG - chr4_1:85307258-85307277 Msa0580250:intron 30.0%
TCCAATAGAAGTTAAATTGG+AGG + chr4_1:85307262-85307281 None:intergenic 30.0%
GACTCCAATAGAAGTTAAAT+TGG + chr4_1:85307265-85307284 None:intergenic 30.0%
!!! GGCTTGTTTTTGTTTTTTCT+AGG - chr4_1:85307339-85307358 Msa0580250:intron 30.0%
!!! GGAAAACAGATTTTTGGTTA+TGG - chr4_1:85307504-85307523 Msa0580250:CDS 30.0%
AAATCTATGTGAAATCACGA+AGG - chr4_1:85307543-85307562 Msa0580250:intron 30.0%
AATCTATGTGAAATCACGAA+GGG - chr4_1:85307544-85307563 Msa0580250:intron 30.0%
TCCAATGAGCTCTTAAAAAT+CGG + chr4_1:85307712-85307731 None:intergenic 30.0%
TGAAAATAAGTGAGCTTCAA+AGG + chr4_1:85307812-85307831 None:intergenic 30.0%
! TTGTATATTTTCTCCATAGC+TGG - chr4_1:85307891-85307910 Msa0580250:CDS 30.0%
! TGTATATTTTCTCCATAGCT+GGG - chr4_1:85307892-85307911 Msa0580250:CDS 30.0%
GCTTATTGAGATGGTAAAAT+AGG + chr4_1:85308072-85308091 None:intergenic 30.0%
TCAATAGGTGCTTAAATTAG+AGG + chr4_1:85308154-85308173 None:intergenic 30.0%
CTGCATCTAGTAATTTGAAA+GGG + chr4_1:85308202-85308221 None:intergenic 30.0%
ACTGCATCTAGTAATTTGAA+AGG + chr4_1:85308203-85308222 None:intergenic 30.0%
GTATACACAGAAGACAAAAA+AGG - chr4_1:85308299-85308318 Msa0580250:intron 30.0%
CTAATGAGGAAACTTTATCT+TGG + chr4_1:85308393-85308412 None:intergenic 30.0%
TTTGTGAAATATGCAAGGTT+TGG - chr4_1:85308504-85308523 Msa0580250:intron 30.0%
TTTACCTTGTAATATCTGCA+TGG - chr4_1:85308666-85308685 Msa0580250:intron 30.0%
!! GATCCTGTTTCATTTGTTTT+AGG - chr4_1:85308764-85308783 Msa0580250:CDS 30.0%
AATTCAAGAGGATAGGAAAA+GGG + chr4_1:85308877-85308896 None:intergenic 30.0%
GATAGAAGTTCAGATACAAA+TGG + chr4_1:85308958-85308977 None:intergenic 30.0%
TTTGTATCTGAACTTCTATC+AGG - chr4_1:85308958-85308977 Msa0580250:intron 30.0%
ATAATTAATGTCTGCACCTT+TGG - chr4_1:85309318-85309337 Msa0580250:intron 30.0%
CAGAAATGGATGGAAATTAT+AGG - chr4_1:85309355-85309374 Msa0580250:intron 30.0%
TGAAGGATCAAGATGTAATA+CGG - chr4_1:85309404-85309423 Msa0580250:CDS 30.0%
!! TTTACCATTGTTGACTTGTT+CGG - chr4_1:85309593-85309612 Msa0580250:intron 30.0%
AGTAGTTTAAACTCCAAACA+AGG + chr4_1:85309711-85309730 None:intergenic 30.0%
AAACTACTATCTTGTGATCT+TGG - chr4_1:85309723-85309742 Msa0580250:CDS 30.0%
CTATGATTATAATCAATGCC+AGG - chr4_1:85309843-85309862 Msa0580250:intron 30.0%
GCAAAATAAAACAAAAGACC+TGG + chr4_1:85309864-85309883 None:intergenic 30.0%
!!! CTAAAAGTATTTTAGAAGGG+GGG - chr4_1:85310172-85310191 Msa0580250:intron 30.0%
CATCTTATGTGAAACTTCTA+CGG - chr4_1:85310211-85310230 Msa0580250:intron 30.0%
! TTATTCTTTTCGATGCAGTT+CGG - chr4_1:85310296-85310315 Msa0580250:intron 30.0%
TAAATTGATCGAGACATTCT+TGG - chr4_1:85310335-85310354 Msa0580250:intron 30.0%
! ACAAATTGTTTTCCAATCTG+TGG + chr4_1:85310378-85310397 None:intergenic 30.0%
! TATGTTTCATTCGTTTTCTC+TGG - chr4_1:85310620-85310639 Msa0580250:intron 30.0%
TTTATATCTGGAAGTAAGAG+GGG + chr4_1:85310647-85310666 None:intergenic 30.0%
CTTTATATCTGGAAGTAAGA+GGG + chr4_1:85310648-85310667 None:intergenic 30.0%
AACAACAACAACAACAAACA+AGG + chr4_1:85310766-85310785 None:intergenic 30.0%
ATTCAAATCAAAGGGAATAG+TGG + chr4_1:85310829-85310848 None:intergenic 30.0%
! TAGTCTGTGTCTGATATTTT+TGG - chr4_1:85311308-85311327 Msa0580250:intron 30.0%
TTGTTATGGATTCAATCATG+TGG - chr4_1:85311354-85311373 Msa0580250:intron 30.0%
TGTTATGGATTCAATCATGT+GGG - chr4_1:85311355-85311374 Msa0580250:intron 30.0%
!!! AAAGAAGCATACTGTTTTTG+AGG - chr4_1:85311516-85311535 Msa0580250:intron 30.0%
!!! AAGAAGCATACTGTTTTTGA+GGG - chr4_1:85311517-85311536 Msa0580250:intron 30.0%
TAAAATGATATATGCAGGAG+TGG + chr4_1:85311628-85311647 None:intergenic 30.0%
!! CTGAATGTCTTATTTACAAC+AGG - chr4_1:85311658-85311677 Msa0580250:intron 30.0%
! CAAGAAAGAGCACAAATAAT+TGG - chr4_1:85311868-85311887 Msa0580250:intron 30.0%
GAACAAAAACTGCATTACTT+GGG + chr4_1:85311966-85311985 None:intergenic 30.0%
GACTAATTTCATGAATTTGC+AGG - chr4_1:85312093-85312112 Msa0580250:intron 30.0%
TATCAGGAAATCTCGTATAT+GGG + chr4_1:85312176-85312195 None:intergenic 30.0%
AACTTCTCAATTTCTTGCTT+TGG + chr4_1:85312286-85312305 None:intergenic 30.0%
AGAAATTGAGAAGTTTGTAC+AGG - chr4_1:85312291-85312310 Msa0580250:intron 30.0%
AAAGAATGCTTTCTATTCCA+GGG - chr4_1:85312597-85312616 Msa0580250:intron 30.0%
AAGAGAGGAAAAACTAAACT+TGG + chr4_1:85312785-85312804 None:intergenic 30.0%
! ATTTTATATTGGGACTGATG+TGG - chr4_1:85312811-85312830 Msa0580250:intron 30.0%
! TAGCTAAAACTCTGAAAATC+AGG + chr4_1:85312845-85312864 None:intergenic 30.0%
!! GATTATGTTGGGTCATTTTA+AGG - chr4_1:85312923-85312942 Msa0580250:CDS 30.0%
TACCCCTAAAAATCAATTGA+AGG + chr4_1:85313080-85313099 None:intergenic 30.0%
TAATATCCTCTCTATTTGGA+GGG + chr4_1:85313169-85313188 None:intergenic 30.0%
ATAATATCCTCTCTATTTGG+AGG + chr4_1:85313170-85313189 None:intergenic 30.0%
GACGCTACTAAGCTATATAT+AGG + chr4_1:85300500-85300519 None:intergenic 35.0%
TGAGTGAGTTTGAAAGAAGA+GGG + chr4_1:85300585-85300604 None:intergenic 35.0%
! TTCTAGAGAGAGAGAGATTT+CGG + chr4_1:85300726-85300745 None:intergenic 35.0%
TGCAAAACAATCCTGATATG+TGG - chr4_1:85301279-85301298 Msa0580250:intron 35.0%
!!! TACCAAGTTTTTTGCATTGC+AGG - chr4_1:85301343-85301362 Msa0580250:intron 35.0%
AACCTGCAATGCAAAAAACT+TGG + chr4_1:85301348-85301367 None:intergenic 35.0%
GTTGTTTACTGAACAGTTGT+TGG - chr4_1:85301373-85301392 Msa0580250:intron 35.0%
! CTGAACAGTTGTTGGATTTT+TGG - chr4_1:85301381-85301400 Msa0580250:intron 35.0%
! CATTGACTATGCATGGATAT+AGG + chr4_1:85301455-85301474 None:intergenic 35.0%
GCTTAAAAGTAACGTACGAT+AGG - chr4_1:85301597-85301616 Msa0580250:CDS 35.0%
CTAGCTGAAATTTCCTTTAG+AGG - chr4_1:85301701-85301720 Msa0580250:intron 35.0%
TTCTTTCCACATTGCTTTGT+TGG - chr4_1:85301743-85301762 Msa0580250:intron 35.0%
CTTGCTGAAATTTCCTTTAG+AGG - chr4_1:85301809-85301828 Msa0580250:CDS 35.0%
!! TTCTTTCCACATAGCTTTGT+TGG - chr4_1:85301851-85301870 Msa0580250:CDS 35.0%
!! CCAAATGAGTATTGAGTCAA+TGG + chr4_1:85301883-85301902 None:intergenic 35.0%
!! CCATTGACTCAATACTCATT+TGG - chr4_1:85301880-85301899 Msa0580250:CDS 35.0%
CTTGCTGAAATTTCCTTTAG+AGG - chr4_1:85301809-85301828 Msa0580250:CDS 35.0%
!! CAAATGAGTATTGAGTCAAC+GGG + chr4_1:85302095-85302114 None:intergenic 35.0%
!! CCAAATGAGTATTGAGTCAA+CGG + chr4_1:85301883-85301902 None:intergenic 35.0%
TATGCTTGTATCTTTCACTC+AGG - chr4_1:85302282-85302301 Msa0580250:intron 35.0%
GTTCAGGTATTAGCTGTATT+TGG - chr4_1:85302391-85302410 Msa0580250:CDS 35.0%
AAAAACCAACAATGAGATCC+AGG + chr4_1:85302486-85302505 None:intergenic 35.0%
CTTAAAACCCTAACATGTGA+TGG - chr4_1:85303084-85303103 Msa0580250:CDS 35.0%
!!! ATTGGTTTTAACTAGCGAGT+TGG - chr4_1:85303209-85303228 Msa0580250:intron 35.0%
TGCAGGAAAAGGAAACTAAA+TGG + chr4_1:85303639-85303658 None:intergenic 35.0%
CATTACTACTGAGTCTTCTA+AGG + chr4_1:85303730-85303749 None:intergenic 35.0%
TACATCTTCTGAGTCTTCTA+AGG + chr4_1:85303762-85303781 None:intergenic 35.0%
! AAGCTTTTGCACAATAGCTT+AGG + chr4_1:85303829-85303848 None:intergenic 35.0%
TAAGCTATTGTGCAAAAGCT+TGG - chr4_1:85303828-85303847 Msa0580250:CDS 35.0%
TCTCTTTATCATGCATGACT+TGG - chr4_1:85303870-85303889 Msa0580250:intron 35.0%
! TTTATCATGCATGACTTGGA+TGG - chr4_1:85303874-85303893 Msa0580250:intron 35.0%
ATATTTGAATCACCGTTGGT+AGG - chr4_1:85304116-85304135 Msa0580250:intron 35.0%
CAGAAAAATGAACCTACCAA+CGG + chr4_1:85304131-85304150 None:intergenic 35.0%
!! TTCACTTTTATGTTTGCAGG+TGG - chr4_1:85304340-85304359 Msa0580250:intron 35.0%
GTGCAATATGTCAAGATGTA+TGG - chr4_1:85304392-85304411 Msa0580250:CDS 35.0%
ATGCAGTGCATGTTACAAAA+AGG + chr4_1:85304458-85304477 None:intergenic 35.0%
CTGTATAAATGCCTAAACAG+AGG + chr4_1:85304689-85304708 None:intergenic 35.0%
TTAGGCATTTATACAGAACC+TGG - chr4_1:85304693-85304712 Msa0580250:intron 35.0%
AACAAACAACCCAATAATGC+AGG + chr4_1:85304896-85304915 None:intergenic 35.0%
! TGCATTATTGGGTTGTTTGT+TGG - chr4_1:85304895-85304914 Msa0580250:intron 35.0%
! GCATTATTGGGTTGTTTGTT+GGG - chr4_1:85304896-85304915 Msa0580250:intron 35.0%
TGATAGCCTTCTATTAATGC+AGG - chr4_1:85304945-85304964 Msa0580250:intron 35.0%
TGTGAACCTGCATTAATAGA+AGG + chr4_1:85304954-85304973 None:intergenic 35.0%
! TCAATCTGACTATTTAGAGC+AGG + chr4_1:85305111-85305130 None:intergenic 35.0%
AGTCAGATTGATACTGTATC+TGG - chr4_1:85305120-85305139 Msa0580250:intron 35.0%
TGGCATTCTTGTGAACATTA+AGG + chr4_1:85305406-85305425 None:intergenic 35.0%
ATAGCATGAAGATATGTGGT+AGG + chr4_1:85305634-85305653 None:intergenic 35.0%
TTAATCGAGTAAGCAGGTAT+CGG - chr4_1:85305858-85305877 Msa0580250:intron 35.0%
AGCATTCTCAACTTTGACAT+GGG + chr4_1:85305952-85305971 None:intergenic 35.0%
AAGCATTCTCAACTTTGACA+TGG + chr4_1:85305953-85305972 None:intergenic 35.0%
AATGCTTATGATCTGTCGAA+TGG - chr4_1:85305966-85305985 Msa0580250:intron 35.0%
TTCAACTATGAGAACCTCTT+CGG + chr4_1:85305998-85306017 None:intergenic 35.0%
AAGAACATCATTGTCCTTCA+AGG + chr4_1:85306049-85306068 None:intergenic 35.0%
! AACAAAAGAGCAGTGTTTTC+TGG + chr4_1:85306323-85306342 None:intergenic 35.0%
! TGGTGTTAATGACCTAATGT+TGG - chr4_1:85306511-85306530 Msa0580250:intron 35.0%
AGGTTATTCACTCCAACATT+AGG + chr4_1:85306526-85306545 None:intergenic 35.0%
! GTAGAGTGTTATGATGCAAA+AGG - chr4_1:85306590-85306609 Msa0580250:intron 35.0%
GAGTGTATTCAAATTGTTCC+AGG + chr4_1:85306718-85306737 None:intergenic 35.0%
ACAATTTGAATACACTCTGC+TGG - chr4_1:85306721-85306740 Msa0580250:intron 35.0%
CAATTTGAATACACTCTGCT+GGG - chr4_1:85306722-85306741 Msa0580250:intron 35.0%
GTCAATCAAGCAATACCATA+TGG + chr4_1:85306796-85306815 None:intergenic 35.0%
! GTTGAGGTATTTCCACTATT+TGG - chr4_1:85307112-85307131 Msa0580250:CDS 35.0%
!! ATGCATGCATGGCTTTATAT+TGG - chr4_1:85307318-85307337 Msa0580250:intron 35.0%
!! ATACTTCCTTGATTTGTGAC+AGG - chr4_1:85307483-85307502 Msa0580250:intron 35.0%
! TGTTTTCCTGTCACAAATCA+AGG + chr4_1:85307492-85307511 None:intergenic 35.0%
! GTGACAGGAAAACAGATTTT+TGG - chr4_1:85307498-85307517 Msa0580250:CDS 35.0%
CAATGAGCTCTTAAAAATCG+GGG + chr4_1:85307710-85307729 None:intergenic 35.0%
CCAATGAGCTCTTAAAAATC+GGG + chr4_1:85307711-85307730 None:intergenic 35.0%
TAAAAAACAACCTGAACTCC+AGG + chr4_1:85307788-85307807 None:intergenic 35.0%
ATAGGTGCTTAAATTAGAGG+CGG + chr4_1:85308151-85308170 None:intergenic 35.0%
TTTCCTCATTAGACTTCTGA+AGG - chr4_1:85308401-85308420 Msa0580250:intron 35.0%
TTCCTCATTAGACTTCTGAA+GGG - chr4_1:85308402-85308421 Msa0580250:intron 35.0%
AAACACTGAAGTCTAGCATA+TGG - chr4_1:85308616-85308635 Msa0580250:CDS 35.0%
AGAACCATGCAGATATTACA+AGG + chr4_1:85308673-85308692 None:intergenic 35.0%
AATTATGGCCCTTATTACCT+GGG + chr4_1:85308850-85308869 None:intergenic 35.0%
AAATTATGGCCCTTATTACC+TGG + chr4_1:85308851-85308870 None:intergenic 35.0%
TAGGAAAAGGGAGGAAATTA+TGG + chr4_1:85308865-85308884 None:intergenic 35.0%
GAATTCAAGAGGATAGGAAA+AGG + chr4_1:85308878-85308897 None:intergenic 35.0%
CAACCTGAAATAGCAATTGT+GGG + chr4_1:85308924-85308943 None:intergenic 35.0%
TCAAGATCTGCAATAGTGAT+TGG + chr4_1:85308988-85309007 None:intergenic 35.0%
AGAGAGATGAATTTCTTCAG+CGG - chr4_1:85309186-85309205 Msa0580250:intron 35.0%
AATTTCCATCCATTTCTGCA+GGG + chr4_1:85309353-85309372 None:intergenic 35.0%
TAATTTCCATCCATTTCTGC+AGG + chr4_1:85309354-85309373 None:intergenic 35.0%
!! AATCAACATTTTGATGTGCC+TGG + chr4_1:85309381-85309400 None:intergenic 35.0%
GACTGTGCTTAATATATTGC+AGG - chr4_1:85309426-85309445 Msa0580250:intron 35.0%
!! TTACCATTGTTGACTTGTTC+GGG - chr4_1:85309594-85309613 Msa0580250:intron 35.0%
GTTGGTCATAAGCATGTAAA+AGG - chr4_1:85309669-85309688 Msa0580250:intron 35.0%
TTAAACTCCAAACAAGGAGA+AGG + chr4_1:85309705-85309724 None:intergenic 35.0%
!!! ACAGCCTCTGATTTTTTTGT+TGG - chr4_1:85309798-85309817 Msa0580250:intron 35.0%
! ACAAGTGTTGCATCTTCTTT+AGG - chr4_1:85309943-85309962 Msa0580250:intron 35.0%
! CAAGTGTTGCATCTTCTTTA+GGG - chr4_1:85309944-85309963 Msa0580250:intron 35.0%
GAACATAAGCATGTAGAATG+CGG + chr4_1:85310570-85310589 None:intergenic 35.0%
! TTATGTTCTGCTACTTCCTA+AGG - chr4_1:85310582-85310601 Msa0580250:intron 35.0%
! TATGTTCTGCTACTTCCTAA+GGG - chr4_1:85310583-85310602 Msa0580250:intron 35.0%
TTATATCTGGAAGTAAGAGG+GGG + chr4_1:85310646-85310665 None:intergenic 35.0%
GCTTTATATCTGGAAGTAAG+AGG + chr4_1:85310649-85310668 None:intergenic 35.0%
CTCTAATGTGCACTGAAAAA+CGG + chr4_1:85310707-85310726 None:intergenic 35.0%
! TTGTTGTTGTTGTTGTTACG+TGG - chr4_1:85310769-85310788 Msa0580250:intron 35.0%
AGGAAAACAATGAGTAGCTA+TGG + chr4_1:85311162-85311181 None:intergenic 35.0%
AGAAAGCAAGAAACAAAACC+TGG + chr4_1:85311205-85311224 None:intergenic 35.0%
!! ACACTGTTGATTCATGGAAA+AGG + chr4_1:85311228-85311247 None:intergenic 35.0%
!! ACTGAAACACTGTTGATTCA+TGG + chr4_1:85311234-85311253 None:intergenic 35.0%
TGCAGTTAACATCTCATACA+CGG + chr4_1:85311261-85311280 None:intergenic 35.0%
!! TCAGCAATTGAAGCTTGTTA+TGG - chr4_1:85311340-85311359 Msa0580250:intron 35.0%
ATTCAATCATGTGGGCATTT+CGG - chr4_1:85311363-85311382 Msa0580250:intron 35.0%
GAAAGGAATATTGCTGAAAC+AGG - chr4_1:85311392-85311411 Msa0580250:intron 35.0%
AGTTCTGTAATCAGTTCTAC+AGG - chr4_1:85311687-85311706 Msa0580250:intron 35.0%
CGAACAAAAACTGCATTACT+TGG + chr4_1:85311967-85311986 None:intergenic 35.0%
!! CAGGTTACCCAATTTGTTAA+TGG - chr4_1:85312112-85312131 Msa0580250:intron 35.0%
GTATCAGGAAATCTCGTATA+TGG + chr4_1:85312177-85312196 None:intergenic 35.0%
! GTCAAAAGAATTTTCAGCTC+AGG - chr4_1:85312198-85312217 Msa0580250:intron 35.0%
! CCAGATTTGCGAAGTATTAT+GGG + chr4_1:85312467-85312486 None:intergenic 35.0%
! ACCAGATTTGCGAAGTATTA+TGG + chr4_1:85312468-85312487 None:intergenic 35.0%
! CATAGAGATCTTTGTTATCC+TGG + chr4_1:85312541-85312560 None:intergenic 35.0%
CAAAGAATGCTTTCTATTCC+AGG - chr4_1:85312596-85312615 Msa0580250:intron 35.0%
TTTCATCTTGCAACTCGATA+GGG + chr4_1:85312631-85312650 None:intergenic 35.0%
ATTTCATCTTGCAACTCGAT+AGG + chr4_1:85312632-85312651 None:intergenic 35.0%
! TATCGAGTTGCAAGATGAAA+TGG - chr4_1:85312631-85312650 Msa0580250:intron 35.0%
! TTTTAATACCGTGGGCATTT+TGG - chr4_1:85312690-85312709 Msa0580250:intron 35.0%
AATAATCTACACTCACCACA+TGG + chr4_1:85312888-85312907 None:intergenic 35.0%
ACAAAAATGGAAGACTCCTT+CGG - chr4_1:85312972-85312991 Msa0580250:exon 35.0%
AACCATATAGTAAGTGCTCT+CGG + chr4_1:85313111-85313130 None:intergenic 35.0%
! CTAGAGATTTGAAGCTAGAA+AGG + chr4_1:85313212-85313231 None:intergenic 35.0%
AGTGAGTTTGAAAGAAGAGG+GGG + chr4_1:85300583-85300602 None:intergenic 40.0%
GAGTGAGTTTGAAAGAAGAG+GGG + chr4_1:85300584-85300603 None:intergenic 40.0%
GTGAGTGAGTTTGAAAGAAG+AGG + chr4_1:85300586-85300605 None:intergenic 40.0%
TCTAGAGAGAGAGAGATTTC+GGG + chr4_1:85300725-85300744 None:intergenic 40.0%
TTGGAAATCGTGTAGATTGC+AGG + chr4_1:85301082-85301101 None:intergenic 40.0%
ATGACTTGAAGCCACATATC+AGG + chr4_1:85301293-85301312 None:intergenic 40.0%
! CTGAAATTTCCTTTAGAGGC+TGG - chr4_1:85301705-85301724 Msa0580250:intron 40.0%
GTCTATCCAACAAAGCAATG+TGG + chr4_1:85301752-85301771 None:intergenic 40.0%
! CAAATCAGTATTGAGTCGAC+GGG + chr4_1:85301774-85301793 None:intergenic 40.0%
! CCAAATCAGTATTGAGTCGA+CGG + chr4_1:85301775-85301794 None:intergenic 40.0%
! CTGAAATTTCCTTTAGAGGC+TGG - chr4_1:85301705-85301724 Msa0580250:intron 40.0%
GTCTATCCAACAAAGCTATG+TGG + chr4_1:85301860-85301879 None:intergenic 40.0%
! CTGAAATTTCCTTTAGAGGC+TGG - chr4_1:85301705-85301724 Msa0580250:intron 40.0%
TTCTTTCCACATCGCTTTGT+TGG - chr4_1:85301959-85301978 Msa0580250:intron 40.0%
ATCTATCCAACAAAGCGATG+TGG + chr4_1:85301968-85301987 None:intergenic 40.0%
!! AGATCCGTTGACTCGATATT+TGG - chr4_1:85301984-85302003 Msa0580250:intron 40.0%
! CTGAAATTTCCTTTAGAGGC+TGG - chr4_1:85301705-85301724 Msa0580250:intron 40.0%
TTCTTTCCACATCGCTTTGT+TGG - chr4_1:85301959-85301978 Msa0580250:intron 40.0%
!! CCGTTGACTCAATACTCATT+TGG - chr4_1:85302093-85302112 Msa0580250:CDS 40.0%
CAATAGTAAGTAGGATGCAG+AGG + chr4_1:85302161-85302180 None:intergenic 40.0%
CTCTGCATCCTACTTACTAT+TGG - chr4_1:85302159-85302178 Msa0580250:intron 40.0%
GCAAAGGTCCAATAGTAAGT+AGG + chr4_1:85302170-85302189 None:intergenic 40.0%
TACTATTGGACCTTTGCCTT+CGG - chr4_1:85302173-85302192 Msa0580250:intron 40.0%
! TCAATAAGCGTTGTTTCCGA+AGG + chr4_1:85302192-85302211 None:intergenic 40.0%
TCTTTCACTCAGGTTCTTGA+AGG - chr4_1:85302292-85302311 Msa0580250:intron 40.0%
AGCAGTTATATGTGCTAGTC+AGG - chr4_1:85302418-85302437 Msa0580250:CDS 40.0%
TACATCCTGGATCTCATTGT+TGG - chr4_1:85302478-85302497 Msa0580250:intron 40.0%
!!! AGCAGATTTTGAAGCATGAG+TGG - chr4_1:85302724-85302743 Msa0580250:intron 40.0%
AACGATCTGTGAGAATTGCA+TGG - chr4_1:85302803-85302822 Msa0580250:intron 40.0%
GTGGTGATAACTGCATATCT+AGG - chr4_1:85303171-85303190 Msa0580250:intron 40.0%
GTGATAACTGCATATCTAGG+TGG - chr4_1:85303174-85303193 Msa0580250:intron 40.0%
! AGGTGGCTAGTTAGAACAAT+TGG - chr4_1:85303191-85303210 Msa0580250:intron 40.0%
GTATGGCTTTCGATGTGATT+TGG - chr4_1:85303255-85303274 Msa0580250:intron 40.0%
CATTGCATGCCTTCTTATCA+TGG - chr4_1:85304078-85304097 Msa0580250:intron 40.0%
TTCTTATCATGGATCCCCTT+GGG - chr4_1:85304089-85304108 Msa0580250:intron 40.0%
CTGGAACTGGGAAAAACTTT+AGG + chr4_1:85304231-85304250 None:intergenic 40.0%
GATTTCGATATGCTGGAACT+GGG + chr4_1:85304243-85304262 None:intergenic 40.0%
AGATTTCGATATGCTGGAAC+TGG + chr4_1:85304244-85304263 None:intergenic 40.0%
AGCGTAAGATTTCGATATGC+TGG + chr4_1:85304250-85304269 None:intergenic 40.0%
TACGCTGCAATGTTTAACAG+AGG - chr4_1:85304264-85304283 Msa0580250:intron 40.0%
TATATTCATGGGCCAATTGC+AGG - chr4_1:85304415-85304434 Msa0580250:CDS 40.0%
GTTAAGTATCTGTCTTACCG+TGG - chr4_1:85304657-85304676 Msa0580250:intron 40.0%
CTAAACAGAGGGAAAAACCA+CGG + chr4_1:85304677-85304696 None:intergenic 40.0%
! TATTCTCTTGAGTGGATTCC+AGG + chr4_1:85304984-85305003 None:intergenic 40.0%
AGGTATGTGCATACTGCATT+TGG - chr4_1:85305073-85305092 Msa0580250:intron 40.0%
GGTATGTGCATACTGCATTT+GGG - chr4_1:85305074-85305093 Msa0580250:intron 40.0%
! CTATTTAGAGCAGGAGAAAG+TGG + chr4_1:85305102-85305121 None:intergenic 40.0%
AATAGGTCTGTTTGGACTAC+TGG - chr4_1:85305155-85305174 Msa0580250:intron 40.0%
TTTGGACTACTGGAATTCCT+TGG - chr4_1:85305165-85305184 Msa0580250:intron 40.0%
GGATTATCCAAACTTCGATG+TGG + chr4_1:85305208-85305227 None:intergenic 40.0%
GCAAAACTTAGAGACTAGGA+TGG + chr4_1:85305532-85305551 None:intergenic 40.0%
TCAACTATGAGAACCTCTTC+GGG + chr4_1:85305997-85306016 None:intergenic 40.0%
TATTGTCCGTGAAACCTTGA+AGG - chr4_1:85306032-85306051 Msa0580250:CDS 40.0%
CATTGTCCTTCAAGGTTTCA+CGG + chr4_1:85306041-85306060 None:intergenic 40.0%
! GAGGGAGACTCTTATTTACT+TGG - chr4_1:85306256-85306275 Msa0580250:CDS 40.0%
!! CCTGCTTTTCAGTATCATCA+TGG + chr4_1:85306292-85306311 None:intergenic 40.0%
CCATGATGATACTGAAAAGC+AGG - chr4_1:85306289-85306308 Msa0580250:intron 40.0%
!!! ACACTGCTCTTTTGTTTTGC+TGG - chr4_1:85306327-85306346 Msa0580250:intron 40.0%
AAGTAAACAACTCAGTGGTG+AGG - chr4_1:85306686-85306705 Msa0580250:intron 40.0%
TGGGCAATTGGATCTATATC+TGG - chr4_1:85306741-85306760 Msa0580250:intron 40.0%
! AGCAGGTACTGTAAACCATA+TGG - chr4_1:85306778-85306797 Msa0580250:intron 40.0%
CTTTATATCCCTACATGCAC+AGG - chr4_1:85306815-85306834 Msa0580250:intron 40.0%
GAAAATGACCTGTGCATGTA+GGG + chr4_1:85306826-85306845 None:intergenic 40.0%
TGAAAATGACCTGTGCATGT+AGG + chr4_1:85306827-85306846 None:intergenic 40.0%
! GTAGAGCTTTTGATCTGTTG+AGG - chr4_1:85307096-85307115 Msa0580250:CDS 40.0%
CTAATCTCTCTATGCATGCA+TGG - chr4_1:85307307-85307326 Msa0580250:intron 40.0%
TCGCTTGATAGGTATGTTGT+TGG - chr4_1:85307677-85307696 Msa0580250:intron 40.0%
CTCTTAAAAATCGGGGATAC+TGG + chr4_1:85307703-85307722 None:intergenic 40.0%
!! CCCGATTTTTAAGAGCTCAT+TGG - chr4_1:85307708-85307727 Msa0580250:intron 40.0%
TTTATGCATGAGACACATCC+TGG - chr4_1:85307767-85307786 Msa0580250:CDS 40.0%
CAAGAAAATCAACCCAGCTA+TGG + chr4_1:85307907-85307926 None:intergenic 40.0%
GCAAGGTTTGGCTATAACTA+CGG - chr4_1:85308516-85308535 Msa0580250:intron 40.0%
CTGAAGTCTAGCATATGGTT+TGG - chr4_1:85308621-85308640 Msa0580250:CDS 40.0%
! AAGTCTAGCATATGGTTTGG+TGG - chr4_1:85308624-85308643 Msa0580250:CDS 40.0%
TTGTGATCACCCAGGTAATA+AGG - chr4_1:85308838-85308857 Msa0580250:intron 40.0%
TGTGATCACCCAGGTAATAA+GGG - chr4_1:85308839-85308858 Msa0580250:intron 40.0%
!! TGTCCCACAATTGCTATTTC+AGG - chr4_1:85308918-85308937 Msa0580250:intron 40.0%
CCAACCTGAAATAGCAATTG+TGG + chr4_1:85308925-85308944 None:intergenic 40.0%
!! CCACAATTGCTATTTCAGGT+TGG - chr4_1:85308922-85308941 Msa0580250:intron 40.0%
GATCTGCAATAGTGATTGGA+AGG + chr4_1:85308984-85309003 None:intergenic 40.0%
! TAGAAGGAGTGTATCTGATG+GGG + chr4_1:85309012-85309031 None:intergenic 40.0%
! GTAGAAGGAGTGTATCTGAT+GGG + chr4_1:85309013-85309032 None:intergenic 40.0%
AAGGCATACAGATTCGTAGA+AGG + chr4_1:85309028-85309047 None:intergenic 40.0%
TGAATTTCTTCAGCGGTTGA+TGG - chr4_1:85309193-85309212 Msa0580250:CDS 40.0%
GCAAGCAAAAGACCTGATTT+GGG + chr4_1:85309223-85309242 None:intergenic 40.0%
AGCAAGCAAAAGACCTGATT+TGG + chr4_1:85309224-85309243 None:intergenic 40.0%
ATTTCCATCCATTTCTGCAG+GGG + chr4_1:85309352-85309371 None:intergenic 40.0%
ATGGATGGAAATTATAGGCC+AGG - chr4_1:85309360-85309379 Msa0580250:intron 40.0%
GACAAATCAGTTGCTGATGT+TGG - chr4_1:85309552-85309571 Msa0580250:CDS 40.0%
ATTCCCGAACAAGTCAACAA+TGG + chr4_1:85309600-85309619 None:intergenic 40.0%
! AGATCATTGTGATTTGAGGC+AGG + chr4_1:85309978-85309997 None:intergenic 40.0%
TGGACATGTTGAATGTGTAC+AGG - chr4_1:85310001-85310020 Msa0580250:intron 40.0%
GATCGAGACATTCTTGGATA+AGG - chr4_1:85310341-85310360 Msa0580250:intron 40.0%
ACAATTTGTGCCACCAATGA+TGG - chr4_1:85310389-85310408 Msa0580250:intron 40.0%
TCAAAGCAGCATATCAACCA+AGG + chr4_1:85310544-85310563 None:intergenic 40.0%
AAAACGGCTTCAAATATGCG+AGG + chr4_1:85310691-85310710 None:intergenic 40.0%
!! CGTTTTTCAGTGCACATTAG+AGG - chr4_1:85310705-85310724 Msa0580250:intron 40.0%
GAAGAGAGAAGAACTTAAGC+CGG + chr4_1:85311133-85311152 None:intergenic 40.0%
! GTTTTTGTGCTCCTAACCTT+GGG - chr4_1:85311457-85311476 Msa0580250:CDS 40.0%
CAGAAACAAAACCCAAGGTT+AGG + chr4_1:85311471-85311490 None:intergenic 40.0%
GTATGCAGAAACAAAACCCA+AGG + chr4_1:85311476-85311495 None:intergenic 40.0%
! ACCGATACTTTTCATAAGCC+TGG - chr4_1:85311752-85311771 Msa0580250:intron 40.0%
! CCCAGGCTTATGAAAAGTAT+CGG + chr4_1:85311756-85311775 None:intergenic 40.0%
! CCGATACTTTTCATAAGCCT+GGG - chr4_1:85311753-85311772 Msa0580250:intron 40.0%
AGGACATGTAATTTGAACCC+AGG + chr4_1:85311773-85311792 None:intergenic 40.0%
TGGGTTCAAATTACATGTCC+TGG - chr4_1:85311772-85311791 Msa0580250:intron 40.0%
! AAAACAAATGCTGAAGCACC+AGG + chr4_1:85311793-85311812 None:intergenic 40.0%
!!! GCTTCAGCATTTGTTTTGTC+TGG - chr4_1:85311796-85311815 Msa0580250:intron 40.0%
!! AATTGGTTTGACCTTTCAGC+TGG - chr4_1:85311885-85311904 Msa0580250:intron 40.0%
ACTTGTAGCAACATCCCAAA+GGG + chr4_1:85311932-85311951 None:intergenic 40.0%
AGTCAGTTGTTCTAGCAAGA+GGG + chr4_1:85312077-85312096 None:intergenic 40.0%
TAGTCAGTTGTTCTAGCAAG+AGG + chr4_1:85312078-85312097 None:intergenic 40.0%
! CGAAGTATTATGGGAAGCAA+AGG + chr4_1:85312458-85312477 None:intergenic 40.0%
CCCATAATACTTCGCAAATC+TGG - chr4_1:85312464-85312483 Msa0580250:CDS 40.0%
TTTGTCATCTTCTGTACTCC+AGG - chr4_1:85312520-85312539 Msa0580250:CDS 40.0%
CAAAGATCTCTATGCTGAAG+AGG - chr4_1:85312547-85312566 Msa0580250:intron 40.0%
TTCATCTTGCAACTCGATAG+GGG + chr4_1:85312630-85312649 None:intergenic 40.0%
!! AGATGAAATGGTGGACTCAT+AGG - chr4_1:85312643-85312662 Msa0580250:intron 40.0%
GAAAAACACCAAAATGCCCA+CGG + chr4_1:85312701-85312720 None:intergenic 40.0%
!!! GGCATTTTGGTGTTTTTCAC+AGG - chr4_1:85312703-85312722 Msa0580250:intron 40.0%
! ACTCTGAAAATCAGGAACCA+TGG + chr4_1:85312837-85312856 None:intergenic 40.0%
!!! TTTCAGAGTTTTAGCTAGCC+AGG - chr4_1:85312848-85312867 Msa0580250:intron 40.0%
!!! TTCAGAGTTTTAGCTAGCCA+GGG - chr4_1:85312849-85312868 Msa0580250:intron 40.0%
TTTAGGTGTGACCTAACTTC+TGG - chr4_1:85313009-85313028 Msa0580250:five_prime_UTR 40.0%
!! TACCGAGAGCACTTACTATA+TGG - chr4_1:85313106-85313125 Msa0580250:five_prime_UTR 40.0%
ACTCGCACGGAATGAAGAAA+AGG + chr4_1:85300550-85300569 None:intergenic 45.0%
GTGAGTTTGAAAGAAGAGGG+GGG + chr4_1:85300582-85300601 None:intergenic 45.0%
CTAGAGAGAGAGAGATTTCG+GGG + chr4_1:85300724-85300743 None:intergenic 45.0%
ACAAAAACCCTAGACTCGCT+CGG + chr4_1:85300755-85300774 None:intergenic 45.0%
ATTCACTCTACTCTCGCTCT+AGG - chr4_1:85300783-85300802 Msa0580250:three_prime_UTR 45.0%
TTCACTCTACTCTCGCTCTA+GGG - chr4_1:85300784-85300803 Msa0580250:three_prime_UTR 45.0%
TCACTCTTCTTCTTCTCCGA+TGG - chr4_1:85300812-85300831 Msa0580250:three_prime_UTR 45.0%
CAAATCTCTGAGCTTCTCAG+CGG + chr4_1:85300838-85300857 None:intergenic 45.0%
! TCGAGTAACGGAACATCGAT+CGG + chr4_1:85300867-85300886 None:intergenic 45.0%
GCGACATTGTTGAAGAGAGA+GGG + chr4_1:85300950-85300969 None:intergenic 45.0%
AGCGACATTGTTGAAGAGAG+AGG + chr4_1:85300951-85300970 None:intergenic 45.0%
!!! GTGCTGCTGATTCGATTTTG+CGG - chr4_1:85301252-85301271 Msa0580250:intron 45.0%
!!! TGCTGCTGATTCGATTTTGC+GGG - chr4_1:85301253-85301272 Msa0580250:intron 45.0%
!! CTATCGGCATTGACTATGCA+TGG + chr4_1:85301462-85301481 None:intergenic 45.0%
ATGATCAAGATGTGCACGCT+AGG - chr4_1:85301528-85301547 Msa0580250:intron 45.0%
!! CCGTCGACTCAATACTGATT+TGG - chr4_1:85301772-85301791 Msa0580250:CDS 45.0%
GTCTATCCAACAAAGCGATG+TGG + chr4_1:85302073-85302092 None:intergenic 45.0%
TTTCATTCCATCTCGCTGCT+CGG + chr4_1:85302350-85302369 None:intergenic 45.0%
CATCTCCGACATCATTGTTC+AGG - chr4_1:85302375-85302394 Msa0580250:CDS 45.0%
! TGCATAGCTTTCTAGCAACG+AGG - chr4_1:85302508-85302527 Msa0580250:intron 45.0%
CAACCTTTCCGTTCGAAATG+AGG + chr4_1:85302534-85302553 None:intergenic 45.0%
ATAAAGCTTCGCCATCTTGC+TGG + chr4_1:85302750-85302769 None:intergenic 45.0%
TATTCCTGATCTTGTCGCAG+CGG - chr4_1:85302767-85302786 Msa0580250:intron 45.0%
! TGTTCAGCTTTTGAGCGAAG+AGG - chr4_1:85302901-85302920 Msa0580250:intron 45.0%
TTATCGCCTCGAAGTTAGAC+TGG - chr4_1:85303287-85303306 Msa0580250:intron 45.0%
TATCGCCTCGAAGTTAGACT+GGG - chr4_1:85303288-85303307 Msa0580250:intron 45.0%
AGTCAGAGATGTGCAGGAAA+AGG + chr4_1:85303650-85303669 None:intergenic 45.0%
GCACAATAGCTTAGGCTTTC+AGG + chr4_1:85303821-85303840 None:intergenic 45.0%
GGCATGCAATGTAGATAGTG+TGG + chr4_1:85304069-85304088 None:intergenic 45.0%
CAAGGGGATCCATGATAAGA+AGG + chr4_1:85304090-85304109 None:intergenic 45.0%
CTTCTTATCATGGATCCCCT+TGG - chr4_1:85304088-85304107 Msa0580250:intron 45.0%
!! TTTAGGAGTGTCTCAAGCTG+TGG + chr4_1:85304214-85304233 None:intergenic 45.0%
AGGTGGCATCCCTTCAATTT+GGG - chr4_1:85304357-85304376 Msa0580250:CDS 45.0%
GATCCAAACACACCTGCAAT+TGG + chr4_1:85304430-85304449 None:intergenic 45.0%
ATTTGTGTTAGGCGGCAGTA+TGG + chr4_1:85304554-85304573 None:intergenic 45.0%
TCGGGGATATTTGTGTTAGG+CGG + chr4_1:85304562-85304581 None:intergenic 45.0%
ATTGCCATGTGCATATGCCT+CGG + chr4_1:85304581-85304600 None:intergenic 45.0%
! CGTGGTTTTTCCCTCTGTTT+AGG - chr4_1:85304675-85304694 Msa0580250:intron 45.0%
GTTAGAATGTGGCATTGCTG+AGG - chr4_1:85304813-85304832 Msa0580250:CDS 45.0%
! CTACTGGAATTCCTTGGTGT+CGG - chr4_1:85305171-85305190 Msa0580250:intron 45.0%
GTTTGAGCCACATCGAAGTT+TGG - chr4_1:85305198-85305217 Msa0580250:intron 45.0%
TTAAGTGCATGGCGAGATAC+AGG - chr4_1:85305678-85305697 Msa0580250:intron 45.0%
ATGCTTCCTGGTATGGTTGA+TGG - chr4_1:85305883-85305902 Msa0580250:intron 45.0%
TGCTTCCTGGTATGGTTGAT+GGG - chr4_1:85305884-85305903 Msa0580250:intron 45.0%
AACAACTCAGTGGTGAGGAT+TGG - chr4_1:85306691-85306710 Msa0580250:intron 45.0%
AATACACTCTGCTGGGCAAT+TGG - chr4_1:85306729-85306748 Msa0580250:intron 45.0%
TGGTTCCATGATAGAAGAGC+AGG - chr4_1:85306761-85306780 Msa0580250:intron 45.0%
CAGTACCTGCTCTTCTATCA+TGG + chr4_1:85306769-85306788 None:intergenic 45.0%
ACAGCAGGATACCCAAATAG+TGG + chr4_1:85307127-85307146 None:intergenic 45.0%
! GATGGCATTGGAGTATACCT+TGG - chr4_1:85307204-85307223 Msa0580250:intron 45.0%
ATCCAGTTGCTTCGCTTGAT+AGG - chr4_1:85307666-85307685 Msa0580250:intron 45.0%
TACCTATCAAGCGAAGCAAC+TGG + chr4_1:85307671-85307690 None:intergenic 45.0%
GTGCTTAAATTAGAGGCGGA+GGG + chr4_1:85308147-85308166 None:intergenic 45.0%
TGCCCTTCAGAAGTCTAATG+AGG + chr4_1:85308407-85308426 None:intergenic 45.0%
TTGGCTATAACTACGGACGT+AGG - chr4_1:85308523-85308542 Msa0580250:intron 45.0%
TGGCTATAACTACGGACGTA+GGG - chr4_1:85308524-85308543 Msa0580250:intron 45.0%
TCAAGAGGATAGGAAAAGGG+AGG + chr4_1:85308874-85308893 None:intergenic 45.0%
! CGTAGAAGGAGTGTATCTGA+TGG + chr4_1:85309014-85309033 None:intergenic 45.0%
!!! TTTTTTCCCCCCTGCAGAAA+TGG - chr4_1:85309341-85309360 Msa0580250:intron 45.0%
TTTCCATCCATTTCTGCAGG+GGG + chr4_1:85309351-85309370 None:intergenic 45.0%
AGAGATGCCTTCTCCTTGTT+TGG - chr4_1:85309695-85309714 Msa0580250:CDS 45.0%
CAGAGGCTGTGACTGAATAA+AGG + chr4_1:85309788-85309807 None:intergenic 45.0%
TGTATTCGTCTGCAGTCAAG+AGG + chr4_1:85309926-85309945 None:intergenic 45.0%
TTCGATGCAGTTCGGTTAAG+AGG - chr4_1:85310304-85310323 Msa0580250:intron 45.0%
TCGATGCAGTTCGGTTAAGA+GGG - chr4_1:85310305-85310324 Msa0580250:intron 45.0%
GCTGAAGATCAACCACAGAT+TGG - chr4_1:85310363-85310382 Msa0580250:intron 45.0%
AGAACAGGATCCATCATTGG+TGG + chr4_1:85310402-85310421 None:intergenic 45.0%
!! ACCAATGATGGATCCTGTTC+TGG - chr4_1:85310401-85310420 Msa0580250:intron 45.0%
!! CCAATGATGGATCCTGTTCT+GGG - chr4_1:85310402-85310421 Msa0580250:intron 45.0%
CTAGCATAATCTCCCAGAAC+AGG + chr4_1:85310417-85310436 None:intergenic 45.0%
!! CTGTTCTGGGAGATTATGCT+AGG - chr4_1:85310415-85310434 Msa0580250:intron 45.0%
GAGGTGGATATCAAACGCAA+GGG + chr4_1:85310801-85310820 None:intergenic 45.0%
CTTGCGTTTGATATCCACCT+CGG - chr4_1:85310800-85310819 Msa0580250:intron 45.0%
!! AAAGGGAATAGTGGATTCCG+AGG + chr4_1:85310820-85310839 None:intergenic 45.0%
TTGAAGATTACCCTGAGCAC+CGG - chr4_1:85311111-85311130 Msa0580250:intron 45.0%
AACAATGAGTAGCTATGGCG+CGG + chr4_1:85311157-85311176 None:intergenic 45.0%
CTTGACAAACAGATCAGTGC+AGG + chr4_1:85311182-85311201 None:intergenic 45.0%
ACTGATCTGTTTGTCAAGCC+AGG - chr4_1:85311184-85311203 Msa0580250:intron 45.0%
TCTTCAGCATCTCCAACAAC+AGG + chr4_1:85311424-85311443 None:intergenic 45.0%
GGAGATGCTGAAGAAGTTTC+AGG - chr4_1:85311430-85311449 Msa0580250:CDS 45.0%
! TGCTGAAGAAGTTTCAGGTG+TGG - chr4_1:85311435-85311454 Msa0580250:CDS 45.0%
! GGTTTTTGTGCTCCTAACCT+TGG - chr4_1:85311456-85311475 Msa0580250:CDS 45.0%
TTGACCTTTCAGCTGGAAAC+TGG - chr4_1:85311892-85311911 Msa0580250:intron 45.0%
CTTGTAGCAACATCCCAAAG+GGG + chr4_1:85311931-85311950 None:intergenic 45.0%
GACTTGTAGCAACATCCCAA+AGG + chr4_1:85311933-85311952 None:intergenic 45.0%
GCATTACTTGGGTATGACTG+TGG + chr4_1:85311955-85311974 None:intergenic 45.0%
ACCTCAGCTGTTGTCATGTT+CGG + chr4_1:85312024-85312043 None:intergenic 45.0%
CGAGTTGCAAGATGAAATGG+TGG - chr4_1:85312634-85312653 Msa0580250:intron 45.0%
!! GAAATGGTGGACTCATAGGT+AGG - chr4_1:85312647-85312666 Msa0580250:intron 45.0%
!!! TCAGAGTTTTAGCTAGCCAG+GGG - chr4_1:85312850-85312869 Msa0580250:intron 45.0%
ATGGACAAGTCTATATCCCC+TGG + chr4_1:85312869-85312888 None:intergenic 45.0%
GGGATATAGACTTGTCCATG+TGG - chr4_1:85312870-85312889 Msa0580250:intron 45.0%
AAGAGTCATCATCACTCCGA+AGG + chr4_1:85312991-85313010 None:intergenic 45.0%
! CGGAGTGATGATGACTCTTT+AGG - chr4_1:85312992-85313011 Msa0580250:five_prime_UTR 45.0%
GTTTGTGCAGAAAACCCTTG+TGG - chr4_1:85313034-85313053 Msa0580250:five_prime_UTR 45.0%
TCCTCTCTATTTGGAGGGAT+GGG + chr4_1:85313164-85313183 None:intergenic 45.0%
ATCCTCTCTATTTGGAGGGA+TGG + chr4_1:85313165-85313184 None:intergenic 45.0%
! TAGCTGGTCTGAGTGCTAAT+TGG + chr4_1:85313280-85313299 None:intergenic 45.0%
!!! TATTTTTATTCATTTTATTT+TGG - chr4_1:85304481-85304500 Msa0580250:intron 5.0%
!! AATTAATTTAGTATAAATAT+TGG + chr4_1:85305715-85305734 None:intergenic 5.0%
!! TTTATACTAAATTAATTAAT+TGG - chr4_1:85305718-85305737 Msa0580250:intron 5.0%
TTCGGGGAGAGAGAAGAGTA+CGG + chr4_1:85300708-85300727 None:intergenic 50.0%
CTTAGATCCAGTGCCGTAGA+AGG + chr4_1:85300904-85300923 None:intergenic 50.0%
TCAAGATGTGCACGCTAGGT+TGG - chr4_1:85301532-85301551 Msa0580250:intron 50.0%
TGTCGTAAGCCAGCCTCTAA+AGG + chr4_1:85301717-85301736 None:intergenic 50.0%
TGTCGTAAGCCAGCCTCTAA+AGG + chr4_1:85301717-85301736 None:intergenic 50.0%
TGTCGTAAGCCAGCCTCTAA+AGG + chr4_1:85301717-85301736 None:intergenic 50.0%
! AGCGTTGTTTCCGAAGGCAA+AGG + chr4_1:85302186-85302205 None:intergenic 50.0%
CAACGAGGCCTCATTTCGAA+CGG - chr4_1:85302523-85302542 Msa0580250:intron 50.0%
AGGCCTCATTTCGAACGGAA+AGG - chr4_1:85302528-85302547 Msa0580250:intron 50.0%
ATCGCCTCGAAGTTAGACTG+GGG - chr4_1:85303289-85303308 Msa0580250:intron 50.0%
!! AAAATGGTGCCACTTGCACC+AGG - chr4_1:85303432-85303451 Msa0580250:CDS 50.0%
CAAAGGAGTCAGAGATGTGC+AGG + chr4_1:85303656-85303675 None:intergenic 50.0%
ATGTGCTATCGGCATCCCAA+AGG - chr4_1:85304027-85304046 Msa0580250:intron 50.0%
TGTGCTATCGGCATCCCAAA+GGG - chr4_1:85304028-85304047 Msa0580250:intron 50.0%
ACGTATCAGCTCAGCCCTTT+GGG + chr4_1:85304045-85304064 None:intergenic 50.0%
CAGGTGGCATCCCTTCAATT+TGG - chr4_1:85304356-85304375 Msa0580250:CDS 50.0%
GCCTAACACAAATATCCCCG+AGG - chr4_1:85304561-85304580 Msa0580250:intron 50.0%
GCCTCGGGGATATTTGTGTT+AGG + chr4_1:85304565-85304584 None:intergenic 50.0%
TTGCCATGTGCATATGCCTC+GGG + chr4_1:85304580-85304599 None:intergenic 50.0%
TTGTTGGGTGTTCTGCTCTC+TGG - chr4_1:85304911-85304930 Msa0580250:intron 50.0%
! CTTGAGTGGATTCCAGGATG+CGG + chr4_1:85304978-85304997 None:intergenic 50.0%
ATCAAGTTCGCAGAAGCTGC+AGG + chr4_1:85305229-85305248 None:intergenic 50.0%
TGCAGCTTCTGCGAACTTGA+TGG - chr4_1:85305228-85305247 Msa0580250:intron 50.0%
GCAGCTTCTGCGAACTTGAT+GGG - chr4_1:85305229-85305248 Msa0580250:intron 50.0%
TGCGAACTTGATGGGACTTC+AGG - chr4_1:85305237-85305256 Msa0580250:intron 50.0%
ATCGGCAATGCTTCCTGGTA+TGG - chr4_1:85305876-85305895 Msa0580250:intron 50.0%
! CAACGTCGTCAGCTTTATGC+TGG - chr4_1:85305925-85305944 Msa0580250:intron 50.0%
TCGAATGGCTAAACCCGAAG+AGG - chr4_1:85305981-85306000 Msa0580250:intron 50.0%
CGTGTAATCTGCAGATGCTG+AGG - chr4_1:85306658-85306677 Msa0580250:intron 50.0%
TGAGACACATCCTGGAGTTC+AGG - chr4_1:85307775-85307794 Msa0580250:CDS 50.0%
GGTGCTTAAATTAGAGGCGG+AGG + chr4_1:85308148-85308167 None:intergenic 50.0%
GCGTAAGTTTGTGATCACCC+AGG - chr4_1:85308830-85308849 Msa0580250:intron 50.0%
! GTTGATGGAGCTCCCAAATC+AGG - chr4_1:85309208-85309227 Msa0580250:CDS 50.0%
TGCAGGGGGGAAAAAACCAA+AGG + chr4_1:85309337-85309356 None:intergenic 50.0%
TTCCATCCATTTCTGCAGGG+GGG + chr4_1:85309350-85309369 None:intergenic 50.0%
! GCTGATGTTGGCTATGCGAA+CGG - chr4_1:85309564-85309583 Msa0580250:CDS 50.0%
CCCAGAACAGGATCCATCAT+TGG + chr4_1:85310405-85310424 None:intergenic 50.0%
CGAGGTGGATATCAAACGCA+AGG + chr4_1:85310802-85310821 None:intergenic 50.0%
AGAACTTAAGCCGGTGCTCA+GGG + chr4_1:85311124-85311143 None:intergenic 50.0%
AAGAACTTAAGCCGGTGCTC+AGG + chr4_1:85311125-85311144 None:intergenic 50.0%
AACAGGCCTGAACCTGTTGT+TGG - chr4_1:85311409-85311428 Msa0580250:CDS 50.0%
GCATCTCCAACAACAGGTTC+AGG + chr4_1:85311418-85311437 None:intergenic 50.0%
CACACCAGTTTCCAGCTGAA+AGG + chr4_1:85311899-85311918 None:intergenic 50.0%
TGTGCTAACTGAGCCCCTTT+GGG - chr4_1:85311915-85311934 Msa0580250:intron 50.0%
TCCGAACATGACAACAGCTG+AGG - chr4_1:85312020-85312039 Msa0580250:intron 50.0%
TCTCTATGCTGAAGAGGCTG+CGG - chr4_1:85312553-85312572 Msa0580250:intron 50.0%
CGGCTCAGAGAGAAAGAGAA+CGG - chr4_1:85312573-85312592 Msa0580250:intron 50.0%
TATTGGGACTGATGTGGCCA+TGG - chr4_1:85312817-85312836 Msa0580250:intron 50.0%
AGGTGTGACCTAACTTCTGG+CGG - chr4_1:85313012-85313031 Msa0580250:five_prime_UTR 50.0%
TGCACAAACCGCCAGAAGTT+AGG + chr4_1:85313023-85313042 None:intergenic 50.0%
CCTCTCTATTTGGAGGGATG+GGG + chr4_1:85313163-85313182 None:intergenic 50.0%
! TCGGGGAGAGAGAAGAGTAC+GGG + chr4_1:85300707-85300726 None:intergenic 55.0%
AATCTCCTCCGAGCGAGTCT+AGG - chr4_1:85300744-85300763 Msa0580250:three_prime_UTR 55.0%
ATCTCCTCCGAGCGAGTCTA+GGG - chr4_1:85300745-85300764 Msa0580250:three_prime_UTR 55.0%
AAAACCCTAGACTCGCTCGG+AGG + chr4_1:85300752-85300771 None:intergenic 55.0%
AGATCCAGTGCCGTAGAAGG+CGG + chr4_1:85300901-85300920 None:intergenic 55.0%
! CGGCACTGGATCTAAGCAAG+AGG - chr4_1:85300908-85300927 Msa0580250:three_prime_UTR 55.0%
TGGCGTAAGCCAGCCTCTAA+AGG + chr4_1:85301825-85301844 None:intergenic 55.0%
AGCATGAGTGGCCAGCAAGA+TGG - chr4_1:85302736-85302755 Msa0580250:intron 55.0%
TTAGCCGCTGCGACAAGATC+AGG + chr4_1:85302774-85302793 None:intergenic 55.0%
ATCGCCCCAGTCTAACTTCG+AGG + chr4_1:85303296-85303315 None:intergenic 55.0%
TTATCCCCGGCAGGCACTAA+CGG - chr4_1:85303502-85303521 Msa0580250:intron 55.0%
CACGTATCAGCTCAGCCCTT+TGG + chr4_1:85304046-85304065 None:intergenic 55.0%
GGGCCAATTGCAGGTGTGTT+TGG - chr4_1:85304424-85304443 Msa0580250:CDS 55.0%
ATCCCCGAGGCATATGCACA+TGG - chr4_1:85304574-85304593 Msa0580250:CDS 55.0%
TGCCATGTGCATATGCCTCG+GGG + chr4_1:85304579-85304598 None:intergenic 55.0%
ATGAGGTGAAGAACAGCGCC+AGG + chr4_1:85304714-85304733 None:intergenic 55.0%
CTCAAACAGCTCCGACACCA+AGG + chr4_1:85305185-85305204 None:intergenic 55.0%
!! CAGGTATCGGCAATGCTTCC+TGG - chr4_1:85305871-85305890 Msa0580250:intron 55.0%
!! CCTGGTATGGTTGATGGGCA+CGG - chr4_1:85305889-85305908 Msa0580250:intron 55.0%
TCAGTGGTGAGGATTGGACC+TGG - chr4_1:85306697-85306716 Msa0580250:intron 55.0%
TTCCCCCCTGCAGAAATGGA+TGG - chr4_1:85309345-85309364 Msa0580250:intron 55.0%
!! GGGAATAGTGGATTCCGAGG+TGG + chr4_1:85310817-85310836 None:intergenic 55.0%
GGGCATTTCGGCACACAGAA+AGG - chr4_1:85311375-85311394 Msa0580250:intron 55.0%
GTGTGCTAACTGAGCCCCTT+TGG - chr4_1:85311914-85311933 Msa0580250:intron 55.0%
CCCCATCCCTCCAAATAGAG+AGG - chr4_1:85313160-85313179 Msa0580250:five_prime_UTR 55.0%
! CGGGGAGAGAGAAGAGTACG+GGG + chr4_1:85300706-85300725 None:intergenic 60.0%
CTGAGCTTCTCAGCGGCCAT+CGG + chr4_1:85300831-85300850 None:intergenic 60.0%
ATCTCGCTGCTCGGCAGGTA+AGG + chr4_1:85302341-85302360 None:intergenic 60.0%
TTACCTGCCGAGCAGCGAGA+TGG - chr4_1:85302340-85302359 Msa0580250:intron 60.0%
ATTCCATCTCGCTGCTCGGC+AGG + chr4_1:85302346-85302365 None:intergenic 60.0%
TGGTGGAAGCCTGGTGCAAG+TGG + chr4_1:85303444-85303463 None:intergenic 60.0%
ACTTGCACCAGGCTTCCACC+AGG - chr4_1:85303443-85303462 Msa0580250:CDS 60.0%
! GACGCACACAGCCTTATCCC+CGG - chr4_1:85303489-85303508 Msa0580250:intron 60.0%
GTTAGTGCCTGCCGGGGATA+AGG + chr4_1:85303503-85303522 None:intergenic 60.0%
ATCTCCGTTAGTGCCTGCCG+GGG + chr4_1:85303509-85303528 None:intergenic 60.0%
CATCTCCGTTAGTGCCTGCC+GGG + chr4_1:85303510-85303529 None:intergenic 60.0%
GCATCTCCGTTAGTGCCTGC+CGG + chr4_1:85303511-85303530 None:intergenic 60.0%
GCAGGCACTAACGGAGATGC+TGG - chr4_1:85303511-85303530 Msa0580250:intron 60.0%
GCAGGTTCACATCCGCATCC+TGG - chr4_1:85304963-85304982 Msa0580250:CDS 60.0%
CCGTGCCCATCAACCATACC+AGG + chr4_1:85305892-85305911 None:intergenic 60.0%
TCGATAGGGGCAATCAGCCC+TGG + chr4_1:85312617-85312636 None:intergenic 60.0%
! GCGACGGTGGCGTCGAGTAA+CGG + chr4_1:85300879-85300898 None:intergenic 65.0%
AGTGCCGTAGAAGGCGGCGA+CGG + chr4_1:85300895-85300914 None:intergenic 65.0%
TGCACCAGGCTTCCACCAGG+TGG - chr4_1:85303446-85303465 Msa0580250:CDS 65.0%
GCACCAGGCTTCCACCAGGT+GGG - chr4_1:85303447-85303466 Msa0580250:CDS 65.0%
CACCAGGCTTCCACCAGGTG+GGG - chr4_1:85303448-85303467 Msa0580250:CDS 65.0%
TACCAAGACCGCACCCCACC+TGG + chr4_1:85303464-85303483 None:intergenic 65.0%
AGGTGGGGTGCGGTCTTGGT+AGG - chr4_1:85303463-85303482 Msa0580250:CDS 65.0%
GGTGGGGTGCGGTCTTGGTA+GGG - chr4_1:85303464-85303483 Msa0580250:CDS 65.0%
! CACACAGCCTTATCCCCGGC+AGG - chr4_1:85303493-85303512 Msa0580250:intron 65.0%
GGGGAACGCTCGCACTCGCA+CGG + chr4_1:85300563-85300582 None:intergenic 70.0%
GCCACCGTCGCCGCCTTCTA+CGG - chr4_1:85300888-85300907 Msa0580250:three_prime_UTR 70.0%
GTCGCCGCCTTCTACGGCAC+TGG - chr4_1:85300894-85300913 Msa0580250:three_prime_UTR 70.0%
CACCCCACCTGGTGGAAGCC+TGG + chr4_1:85303453-85303472 None:intergenic 70.0%
GGCTTCCACCAGGTGGGGTG+CGG - chr4_1:85303453-85303472 Msa0580250:CDS 70.0%
CAAGACCGCACCCCACCTGG+TGG + chr4_1:85303461-85303480 None:intergenic 70.0%
CACCAGGTGGGGTGCGGTCT+TGG - chr4_1:85303459-85303478 Msa0580250:CDS 70.0%
GCCGTAGAAGGCGGCGACGG+TGG + chr4_1:85300892-85300911 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 85300456 85313347 85300456 ID=Msa0580250;Name=Msa0580250
chr4_1 mRNA 85300456 85313347 85300456 ID=Msa0580250-mRNA-1;Parent=Msa0580250;Name=Msa0580250-mRNA-1;_AED=0.12;_eAED=0.13;_QI=375|0.96|0.96|1|0.93|0.93|33|494|1088
chr4_1 exon 85300456 85300949 85300456 ID=Msa0580250-mRNA-1:exon:31362;Parent=Msa0580250-mRNA-1
chr4_1 exon 85301139 85301261 85301139 ID=Msa0580250-mRNA-1:exon:31361;Parent=Msa0580250-mRNA-1
chr4_1 exon 85301584 85301688 85301584 ID=Msa0580250-mRNA-1:exon:31360;Parent=Msa0580250-mRNA-1
chr4_1 exon 85301762 85301899 85301762 ID=Msa0580250-mRNA-1:exon:31359;Parent=Msa0580250-mRNA-1
chr4_1 exon 85301986 85302123 85301986 ID=Msa0580250-mRNA-1:exon:31358;Parent=Msa0580250-mRNA-1
chr4_1 exon 85302352 85302492 85302352 ID=Msa0580250-mRNA-1:exon:31357;Parent=Msa0580250-mRNA-1
chr4_1 exon 85302598 85302708 85302598 ID=Msa0580250-mRNA-1:exon:31356;Parent=Msa0580250-mRNA-1
chr4_1 exon 85303077 85303143 85303077 ID=Msa0580250-mRNA-1:exon:31355;Parent=Msa0580250-mRNA-1
chr4_1 exon 85303307 85303489 85303307 ID=Msa0580250-mRNA-1:exon:31354;Parent=Msa0580250-mRNA-1
chr4_1 exon 85303571 85303651 85303571 ID=Msa0580250-mRNA-1:exon:31353;Parent=Msa0580250-mRNA-1
chr4_1 exon 85303781 85303866 85303781 ID=Msa0580250-mRNA-1:exon:31352;Parent=Msa0580250-mRNA-1
chr4_1 exon 85304356 85304445 85304356 ID=Msa0580250-mRNA-1:exon:31351;Parent=Msa0580250-mRNA-1
chr4_1 exon 85304574 85304654 85304574 ID=Msa0580250-mRNA-1:exon:31350;Parent=Msa0580250-mRNA-1
chr4_1 exon 85304765 85304863 85304765 ID=Msa0580250-mRNA-1:exon:31349;Parent=Msa0580250-mRNA-1
chr4_1 exon 85304952 85305017 85304952 ID=Msa0580250-mRNA-1:exon:31348;Parent=Msa0580250-mRNA-1
chr4_1 exon 85306007 85306115 85306007 ID=Msa0580250-mRNA-1:exon:31347;Parent=Msa0580250-mRNA-1
chr4_1 exon 85306201 85306298 85306201 ID=Msa0580250-mRNA-1:exon:31346;Parent=Msa0580250-mRNA-1
chr4_1 exon 85307021 85307131 85307021 ID=Msa0580250-mRNA-1:exon:31345;Parent=Msa0580250-mRNA-1
chr4_1 exon 85307493 85307552 85307493 ID=Msa0580250-mRNA-1:exon:31344;Parent=Msa0580250-mRNA-1
chr4_1 exon 85307723 85307929 85307723 ID=Msa0580250-mRNA-1:exon:31343;Parent=Msa0580250-mRNA-1
chr4_1 exon 85308545 85308643 85308545 ID=Msa0580250-mRNA-1:exon:31342;Parent=Msa0580250-mRNA-1
chr4_1 exon 85308729 85308836 85308729 ID=Msa0580250-mRNA-1:exon:31341;Parent=Msa0580250-mRNA-1
chr4_1 exon 85309062 85309106 85309062 ID=Msa0580250-mRNA-1:exon:31340;Parent=Msa0580250-mRNA-1
chr4_1 exon 85309191 85309253 85309191 ID=Msa0580250-mRNA-1:exon:31339;Parent=Msa0580250-mRNA-1
chr4_1 exon 85309367 85309444 85309367 ID=Msa0580250-mRNA-1:exon:31338;Parent=Msa0580250-mRNA-1
chr4_1 exon 85309518 85309586 85309518 ID=Msa0580250-mRNA-1:exon:31337;Parent=Msa0580250-mRNA-1
chr4_1 exon 85309670 85309808 85309670 ID=Msa0580250-mRNA-1:exon:31336;Parent=Msa0580250-mRNA-1
chr4_1 exon 85310813 85310895 85310813 ID=Msa0580250-mRNA-1:exon:31335;Parent=Msa0580250-mRNA-1
chr4_1 exon 85310967 85311074 85310967 ID=Msa0580250-mRNA-1:exon:31334;Parent=Msa0580250-mRNA-1
chr4_1 exon 85311217 85311288 85311217 ID=Msa0580250-mRNA-1:exon:31333;Parent=Msa0580250-mRNA-1
chr4_1 exon 85311407 85311499 85311407 ID=Msa0580250-mRNA-1:exon:31332;Parent=Msa0580250-mRNA-1
chr4_1 exon 85312439 85312555 85312439 ID=Msa0580250-mRNA-1:exon:31331;Parent=Msa0580250-mRNA-1
chr4_1 exon 85312874 85313347 85312874 ID=Msa0580250-mRNA-1:exon:31330;Parent=Msa0580250-mRNA-1
chr4_1 five_prime_UTR 85312973 85313347 85312973 ID=Msa0580250-mRNA-1:five_prime_utr;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85312874 85312972 85312874 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85312439 85312555 85312439 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85311407 85311499 85311407 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85311217 85311288 85311217 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85310967 85311074 85310967 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85310813 85310895 85310813 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85309670 85309808 85309670 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85309518 85309586 85309518 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85309367 85309444 85309367 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85309191 85309253 85309191 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85309062 85309106 85309062 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85308729 85308836 85308729 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85308545 85308643 85308545 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85307723 85307929 85307723 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85307493 85307552 85307493 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85307021 85307131 85307021 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85306201 85306298 85306201 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85306007 85306115 85306007 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85304952 85305017 85304952 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85304765 85304863 85304765 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85304574 85304654 85304574 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85304356 85304445 85304356 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85303781 85303866 85303781 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85303571 85303651 85303571 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85303307 85303489 85303307 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85303077 85303143 85303077 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85302598 85302708 85302598 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85302352 85302492 85302352 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85301986 85302123 85301986 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85301762 85301899 85301762 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85301584 85301688 85301584 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 CDS 85301139 85301261 85301139 ID=Msa0580250-mRNA-1:cds;Parent=Msa0580250-mRNA-1
chr4_1 three_prime_UTR 85300456 85300949 85300456 ID=Msa0580250-mRNA-1:three_prime_utr;Parent=Msa0580250-mRNA-1
Gene Sequence

>Msa0580250

ATGGCCGCTGAGAAGCTCAGAGATTTGAGCTCTCCGATCGATGTTCCGTTACTCGACGCCACCGTCGCCGCCTTCTACGGCACTGGATCTAAGCAAGAGAGAAGTGCTGCTGATTCGATTTTGCGGGACTTGCAAAACAATCCTGATATGTGGCTTCAAGTCATGCATATTTTGCAGAACACTCAAAATCTCAATACCAAGTTTTTTGCATTGCAGGTTCTTGAAGGCGTAATTAAATATAGATGGAATGCCTTACCTGCCGAGCAGCGAGATGGAATGAAAAATTTCATCTCCGACATCATTGTTCAGCTTTCTAGCAACGAGGCCTCATTTCGAACGGAAAGGTTGTATGTCAACAAGCTCAACATTATATTAGTTCAGATTTTGAAGCATGAGTGGCCAGCAAGATGGCGAAGCTTTATTCCTGATCTTGTCGCAGCGGCTAAAACTAGTGAAACGATCTGTGAGAATTGCATGGCTATATTGAAACTTTTGAGCGAAGAGGTTTTTGATTTTTCAAGAGGAGAAATGACACAGCAGAAGATAAAAGAGCTTAAACAATCATTGAACAGCGAATTTCAACTCATACATGAGTTATGCTTATATGTGCTATCGGCATCCCAAAGGGCTGAGCTGATACGTGCCACACTATCTACATTGCATGCCTTCTTATCATGGATCCCCTTGGGTTATATATTTGAATCACCGTTGCTTGAGACACTCCTAAAGTTTTTCCCAGTTCCAGCATATCGAAATCTTACGCTGCAATGTTTAACAGAGGTGGCATCCCTTCAATTTGGGAATTTTTATGATGTGCAATATGTCAAGATGTATGGTATATTCATGGGCCAATTGCAGACCATACTGCCGCCTAACACAAATATCCCCGAGGCATATGCACATGGCAATAGTGAAGAACAAGCATTTATACAGAACCTGGCGCTGTTCTTCACCTCATTTTTTAAGGTTCACATCCGCATCCTGGAATCCACTCAAGAGAATATAACAACTTTGCTTTTGGGCCTTGAATATCTTATCAGCATTTCATACGTTGACGATACTGAAGTTTTTAAGGTCTGTTTGGACTACTGGAATTCCTTGGTGTCGGAGCTGTTTGAGCCACATCGAAGTTTGGATAATCCTGCAGCTTCTGCGAACTTGATGGGACTTCAGGTATCGGCAATGCTTCCTGGTATGGTTGATGGGCACGGTTCTCAGCTTCTTCAACGTCGTCAGCTTTATGCTGGTCCCATGTCAAAGTTGAGAATGCTTATGATCTGTCGAATGGCTAAACCCGAAGAGGTTCTCATAGTTGAAGATGAAAATGGGAATATTGTCCGTGAAACCTTGAAGGACAATGATGTTCTTGTTCAATATAAGATTATGAGGGAGACTCTTATTTACTTGGCACATCTTGACCATGATGATACTGAAAAGCAGATGCTGAGGAAATTAAGTAAACAACTCAGTGGTGAGGATTGGACCTGGAACAATTTGAATACACTCTGCTGGGCAATTGGATCTATATCTGGTTCCATGATAGAAGAGCAGGAAAACAGATTTTTGGTTATGGTAATTCGTGATTTATTAAATCTATGTGAAATCACGAAGGGAAAAGATAACAAAGCAGTTATTGCAAGTAATATCATGTATGTTGTTGGCCAGTATCCCCGATTTTTAAGAGCTCATTGGAAGTTTCTTAAAACTGTTGTGAACAAGTTGTTTGAGTTTATGCATGAGACACATCCTGGAGTTCAGGATATGGCGTGTGACACTTTTTTGAAAATAGTTCAGAAGTGCAAGCGTAAGTTTGTGATCACCCAGGTTGGCGAAAACGAGCCATTTGTATCTGAACTTCTATCAGGCCTTCCAATCACTATTGCAGATCTTGAACCCCATCAGATACACTCCTTCTACGAATCTGTTGCTCATATGATTCAAGCAGAGTCTGATTCACAGAAGAGAGATGAATTTCTTCAGCGGTTGATGGAGCTCCCAAATCAGAAATGGATGGAAATTATAGGCCAGGCACATCAAAATGTTGATTTTTTGAAGGATCAAGATGTAATACGGACTGTGCTTAATATATTGCAGACGAATACAAGTGTTGCATCTTCTTTAGGGACATTTTTCCTGCCTCAAATCACAATGATCTTTTTGGACATGTTGAATGTGTACAGAATGTACAGTGAGCTTATTTCTAAAAGTATTTTAGAAGGGGGGCCTTATGCATCTAAAACATCTTATGTGAAACTTCTACGTTCGGTTAAGAGGGAGACACTTAAATTGATCGAGACATTCTTGGATAAGGCTGAAGATCAACCACAGATTGGAAAACAATTTGTGCCACCAATGATGGATCCTGTTCTGGGAGATTATGCTAGGAATGCTCCTGATGCAAGGGAATCTGAGGTTTTGTCCCTTTTTGCTACAATAGTAAACAAATATAAAGCTACAATGATTGAAGATGTGCCTCGCATATTTGAAGCCGTTTTTCAGTGCACATTAGAGATGATTACAAAAAACTTTGAAGATTACCCTGAGCACCGGCTTAAGTTCTTCTCTCTTCTCCGCGCCATAGCTACTCATTGTTTTCCTGCACTGATCTGTTTGTCAAGCCAGTCTGTGTCTGATATTTTTGGTCATCTGTTTCAGCAATTGAAGCTTGTTATGGATTCAATCATGTGGGCATTTCGGCACACAGAAAGGAATATTGCTGAAACAGGCCTGAACCTGTTGTTGGAGATGCTGAAGAAGTTTCAGGGCTCAGAGTTCTGTAATCAGTTCTACAGGACATACTTCTTGACAACTGAGAATGAGATATTTGCTGTTTTGACCGATACTTTTCATAAGCCTGGGTTCAAATTACATGTCCTGGTGCTTCAGCATTTGTTTTGTCTGCTGGAAACTGGTGTGCTAACTGAGCCCCTTTGGGATGTTGCTACAAGTCCACAGTCATACCCAAGTAATGCAGTTTTTGTTCGTGAGTATACTATAAAGCTTCTAAGTGCTTCTTTTCCGAACATGACAACAGCTGAGGTTACCCAATTTGTTAATGGACTATTTGAGTCTACAAATGATCTCTCTACATTTAAAACCCATATACGAGATTTCCTGATACAGTCAAAAGAATTTTCAGCTCAGGATAACAAAGATCTCTATGCTGAAGAGGCTGCGGCTCAGAGAGAAAGAGAACGGCAAAGAATGCTTTCTATTCCAGGGCTGATTGCCCCTATCGAGTTGCAAGATGAAATGGTGGACTCATAG
Protein sequence

>Msa0580250

MAAEKLRDLSSPIDVPLLDATVAAFYGTGSKQERSAADSILRDLQNNPDMWLQVMHILQNTQNLNTKFFALQVLEGVIKYRWNALPAEQRDGMKNFISDIIVQLSSNEASFRTERLYVNKLNIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQKIKELKQSLNSEFQLIHELCLYVLSASQRAELIRATLSTLHAFLSWIPLGYIFESPLLETLLKFFPVPAYRNLTLQCLTEVASLQFGNFYDVQYVKMYGIFMGQLQTILPPNTNIPEAYAHGNSEEQAFIQNLALFFTSFFKVHIRILESTQENITTLLLGLEYLISISYVDDTEVFKVCLDYWNSLVSELFEPHRSLDNPAASANLMGLQVSAMLPGMVDGHGSQLLQRRQLYAGPMSKLRMLMICRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLAHLDHDDTEKQMLRKLSKQLSGEDWTWNNLNTLCWAIGSISGSMIEEQENRFLVMVIRDLLNLCEITKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVITQVGENEPFVSELLSGLPITIADLEPHQIHSFYESVAHMIQAESDSQKRDEFLQRLMELPNQKWMEIIGQAHQNVDFLKDQDVIRTVLNILQTNTSVASSLGTFFLPQITMIFLDMLNVYRMYSELISKSILEGGPYASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNAPDARESEVLSLFATIVNKYKATMIEDVPRIFEAVFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALICLSSQSVSDIFGHLFQQLKLVMDSIMWAFRHTERNIAETGLNLLLEMLKKFQGSEFCNQFYRTYFLTTENEIFAVLTDTFHKPGFKLHVLVLQHLFCLLETGVLTEPLWDVATSPQSYPSNAVFVREYTIKLLSASFPNMTTAEVTQFVNGLFESTNDLSTFKTHIRDFLIQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPIELQDEMVDS*