Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0099420 | sp|Q9SMY8|FBL15_ARATH | 65.423 | 911 | 290 | 8 | 80 | 980 | 89 | 984 | 0.0 | 1123 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0099420 | A0A396JIU4 | 98.278 | 987 | 15 | 2 | 1 | 986 | 1 | 986 | 0.0 | 1958 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0099340 | Msa0099420 | 0.987618 | 6.495956e-171 | -8.615850e-47 |
Msa0099420 | Msa0611220 | 0.802605 | 5.181771e-49 | -8.615850e-47 |
Msa0099420 | Msa1114680 | 0.809838 | 1.552127e-50 | -8.615850e-47 |
Msa0099420 | Msa1268230 | 0.823434 | 1.387925e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0099420 | MtrunA17_Chr1g0150971 | 98.278 | 987 | 15 | 2 | 1 | 986 | 1 | 986 | 0.0 | 1958 |
Msa0099420 | MtrunA17_Chr1g0150991 | 84.347 | 658 | 75 | 2 | 193 | 850 | 11 | 640 | 0.0 | 1097 |
Msa0099420 | MtrunA17_Chr7g0272131 | 27.021 | 470 | 279 | 15 | 343 | 770 | 142 | 589 | 6.51e-20 | 95.5 |
Msa0099420 | MtrunA17_Chr4g0004901 | 26.847 | 555 | 315 | 21 | 301 | 811 | 140 | 647 | 1.13e-17 | 88.2 |
Msa0099420 | MtrunA17_Chr1g0149351 | 25.366 | 410 | 242 | 15 | 339 | 699 | 188 | 582 | 1.70e-16 | 84.3 |
Msa0099420 | MtrunA17_Chr1g0149351 | 26.154 | 455 | 255 | 17 | 377 | 774 | 180 | 610 | 1.84e-13 | 74.7 |
Msa0099420 | MtrunA17_Chr2g0286991 | 25.048 | 523 | 306 | 18 | 471 | 977 | 132 | 584 | 1.19e-14 | 78.2 |
Msa0099420 | MtrunA17_Chr2g0286991 | 26.464 | 427 | 256 | 18 | 338 | 722 | 164 | 574 | 2.06e-14 | 77.4 |
Msa0099420 | MtrunA17_Chr2g0286991 | 26.013 | 469 | 278 | 22 | 398 | 807 | 126 | 584 | 8.69e-13 | 72.4 |
Msa0099420 | MtrunA17_Chr3g0137771 | 23.820 | 445 | 229 | 15 | 327 | 699 | 174 | 580 | 1.47e-13 | 75.1 |
Msa0099420 | MtrunA17_Chr1g0151001 | 84.615 | 39 | 6 | 0 | 947 | 985 | 1 | 39 | 2.43e-13 | 65.1 |
Msa0099420 | MtrunA17_Chr4g0063841 | 24.074 | 378 | 228 | 13 | 339 | 672 | 179 | 541 | 1.48e-11 | 68.6 |
Msa0099420 | MtrunA17_Chr1g0159531 | 24.910 | 277 | 165 | 10 | 169 | 426 | 9 | 261 | 4.96e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0099420 | AT4G33210.1 | 65.423 | 911 | 290 | 8 | 80 | 980 | 89 | 984 | 0.0 | 1123 |
Msa0099420 | AT4G15475.1 | 24.486 | 486 | 284 | 17 | 551 | 977 | 123 | 584 | 1.09e-16 | 85.5 |
Msa0099420 | AT4G15475.1 | 22.710 | 524 | 305 | 20 | 229 | 722 | 121 | 574 | 4.90e-14 | 76.6 |
Msa0099420 | AT4G15475.1 | 23.885 | 381 | 217 | 12 | 274 | 620 | 246 | 587 | 9.23e-12 | 69.3 |
Msa0099420 | AT2G25490.1 | 24.124 | 485 | 288 | 19 | 335 | 772 | 172 | 623 | 2.25e-14 | 77.8 |
Msa0099420 | AT2G25490.1 | 26.392 | 485 | 267 | 18 | 342 | 775 | 151 | 596 | 4.87e-13 | 73.6 |
Msa0099420 | AT5G25350.1 | 25.635 | 394 | 231 | 13 | 339 | 683 | 166 | 546 | 1.61e-12 | 72.0 |
Msa0099420 | AT5G25350.1 | 23.849 | 478 | 282 | 13 | 372 | 817 | 153 | 580 | 1.35e-11 | 68.9 |
Msa0099420 | AT5G27920.1 | 23.950 | 476 | 295 | 12 | 342 | 770 | 97 | 552 | 1.65e-11 | 68.9 |
Msa0099420 | AT5G01720.1 | 24.000 | 425 | 263 | 13 | 364 | 736 | 154 | 570 | 3.77e-11 | 67.8 |
Find 220 sgRNAs with CRISPR-Local
Find 473 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAACACATCTTCGAAAATT+AGG | 0.085012 | 1_3:-5577712 | Msa0099420:five_prime_UTR |
AATTTAGGTCTTCTCATTTC+TGG | 0.102063 | 1_3:-5576474 | Msa0099420:intron |
ATGCGGAGTATGTTTAATTT+TGG | 0.107392 | 1_3:+5573183 | None:intergenic |
ATGAAAACCTTCCTAATATT+TGG | 0.132121 | 1_3:+5571907 | None:intergenic |
GGTCTTCGGTCTCTCAATTT+AGG | 0.148162 | 1_3:-5573213 | Msa0099420:CDS |
TGAATCTCTGGTGCTGTTTA+TGG | 0.211607 | 1_3:-5577652 | Msa0099420:CDS |
CAGGAGTTGGATTTGTCTTA+TGG | 0.225295 | 1_3:-5572162 | Msa0099420:CDS |
TGATTGATGGGTTTGATTCC+TGG | 0.254850 | 1_3:-5577460 | Msa0099420:CDS |
CAACACATCTTCGAAAATTA+GGG | 0.266130 | 1_3:-5577711 | Msa0099420:five_prime_UTR |
AAATCAAGCAGAGCTAAATT+TGG | 0.267048 | 1_3:+5572860 | None:intergenic |
GCAGATAAGCTCAGCGAGTA+TGG | 0.274859 | 1_3:-5570652 | Msa0099420:intron |
AGAGAGAAAGTGAGGGGAAA+TGG | 0.287044 | 1_3:+5577776 | None:intergenic |
CTTGAAGGTACTAAAGTTGC+AGG | 0.289199 | 1_3:-5572250 | Msa0099420:intron |
GTCTTCGGTCTCTCAATTTA+GGG | 0.300756 | 1_3:-5573212 | Msa0099420:CDS |
CCGCATTGAAGCGATGTTAA+TGG | 0.303108 | 1_3:-5573166 | Msa0099420:CDS |
TGAGCTAACATGCCCTTATC+TGG | 0.308157 | 1_3:-5573876 | Msa0099420:CDS |
GCGTGGGTTGTCCAAATATT+AGG | 0.308828 | 1_3:-5571918 | Msa0099420:CDS |
TGGTGCTTTACCAGCTCTTC+AGG | 0.309631 | 1_3:-5572181 | Msa0099420:CDS |
ATGTCAAGAGAGGACAATTA+AGG | 0.315111 | 1_3:+5573100 | None:intergenic |
GACTTTCCGGACCGGAATTC+GGG | 0.321991 | 1_3:+5577384 | None:intergenic |
AAATTTCGTGCAGCATGTTC+TGG | 0.324114 | 1_3:-5570627 | Msa0099420:CDS |
TCATCAGCAACAGGACTTTC+CGG | 0.325567 | 1_3:+5577371 | None:intergenic |
ATCTATGCTGGCTTAATCTA+AGG | 0.328261 | 1_3:-5571798 | Msa0099420:intron |
AGGACCTTCTATTTATTTGC+TGG | 0.329200 | 1_3:-5576098 | Msa0099420:CDS |
TTGAAGACCATGAGATTGTT+AGG | 0.337302 | 1_3:-5576646 | Msa0099420:CDS |
TTTATATTGTTGTGTTTGTT+TGG | 0.344802 | 1_3:-5570463 | Msa0099420:three_prime_UTR |
CTTCTGCTTGAACTTGATAT+AGG | 0.345354 | 1_3:-5575629 | Msa0099420:CDS |
ATTGACCAATCTATTCCTTC+AGG | 0.349829 | 1_3:-5571655 | Msa0099420:intron |
TGATTTATCATACACTTTCC+TGG | 0.349909 | 1_3:-5572843 | Msa0099420:CDS |
ATTGGATGGTTGTGATCATT+TGG | 0.352347 | 1_3:-5573843 | Msa0099420:CDS |
TGGAAAATTGAAGGGTGAAT+TGG | 0.352998 | 1_3:+5577737 | None:intergenic |
GATCCACTTCTTGTAAAGAT+TGG | 0.357169 | 1_3:+5574665 | None:intergenic |
ATAACAATTTACAATACATT+AGG | 0.357522 | 1_3:+5570488 | None:intergenic |
TGAATATGCATGATTTAAAC+TGG | 0.360921 | 1_3:-5572062 | Msa0099420:CDS |
CTTACACGTGTGAGTTTAAA+CGG | 0.367445 | 1_3:-5572090 | Msa0099420:CDS |
CTTCAGCAACTGTTCCTCAT+TGG | 0.371781 | 1_3:-5571703 | Msa0099420:intron |
ACAAGAAAGAAGCTCTTCTA+TGG | 0.373730 | 1_3:+5572122 | None:intergenic |
GCTACAGCATTGAGCATATC+AGG | 0.374719 | 1_3:-5576118 | Msa0099420:CDS |
GGACTTTCCGGACCGGAATT+CGG | 0.376593 | 1_3:+5577383 | None:intergenic |
ATACTGCCCAAACATATCTT+TGG | 0.381624 | 1_3:-5575450 | Msa0099420:CDS |
AGTAATAATAATAATTGTTA+TGG | 0.383288 | 1_3:-5576749 | Msa0099420:CDS |
CACACCTCCAAAGATATGTT+TGG | 0.388572 | 1_3:+5575443 | None:intergenic |
GGGGAAATGGAAGGTGGAAA+TGG | 0.391981 | 1_3:+5577789 | None:intergenic |
AATATTAATGACTCAATTAG+TGG | 0.392177 | 1_3:+5572935 | None:intergenic |
GCACAACATTGTCCTAATCT+TGG | 0.392387 | 1_3:-5575488 | Msa0099420:CDS |
TCAAATTAGCTGACAGAGAA+AGG | 0.397336 | 1_3:+5571845 | None:intergenic |
ACATTGGGAAGAGGACAGAT+AGG | 0.397458 | 1_3:-5575961 | Msa0099420:CDS |
GTCTTAGAATTGTCAACATT+GGG | 0.400988 | 1_3:+5575315 | None:intergenic |
ATGGACTCTGTTCCCTGCAT+TGG | 0.402487 | 1_3:-5572886 | Msa0099420:CDS |
AGGCACACTTGGCAATAAAT+CGG | 0.403187 | 1_3:-5570517 | Msa0099420:three_prime_UTR |
TGACTCTTGTAAACAACTAA+AGG | 0.404503 | 1_3:-5572801 | Msa0099420:intron |
AGTTGAGGTTCTGAAGTAAT+CGG | 0.409969 | 1_3:+5571941 | None:intergenic |
CTAAATTTGGGAGCCAATGC+AGG | 0.411003 | 1_3:+5572873 | None:intergenic |
GAGCAAAGTGAACTACTCTA+TGG | 0.414803 | 1_3:-5576804 | Msa0099420:CDS |
AGGGTGAATTGGAGAGAGAA+AGG | 0.416071 | 1_3:+5577748 | None:intergenic |
GTCACTCACGCATGAATCTC+TGG | 0.418205 | 1_3:-5577664 | Msa0099420:exon |
TTCTCTGTCAGCTAATTTGA+AGG | 0.430609 | 1_3:-5571842 | Msa0099420:CDS |
AATCAAGCAGAGCTAAATTT+GGG | 0.435350 | 1_3:+5572861 | None:intergenic |
CTACTTCTCAGGTTGGTCTT+CGG | 0.438635 | 1_3:-5573227 | Msa0099420:intron |
TGAAGGCAATCTCTTTGTTA+AGG | 0.438710 | 1_3:-5576072 | Msa0099420:intron |
TTATCTGGAGAAGGTCATAT+TGG | 0.439926 | 1_3:-5573861 | Msa0099420:CDS |
TGCCCATCGATTGGGTTAGA+TGG | 0.440347 | 1_3:-5572905 | Msa0099420:CDS |
GCCGCTGTAATCCCGAATTC+CGG | 0.444840 | 1_3:-5577395 | Msa0099420:CDS |
TATTTATTTGCTGGTCATGA+AGG | 0.444953 | 1_3:-5576089 | Msa0099420:CDS |
CGAGCGCCGTACAGCAGGCC+AGG | 0.450701 | 1_3:+5577442 | None:intergenic |
ATGCCAATCTTTACAAGAAG+TGG | 0.451112 | 1_3:-5574668 | Msa0099420:CDS |
TGGGAACAGTGTGCTGTTGA+TGG | 0.451344 | 1_3:+5571883 | None:intergenic |
GGGTGAATTGGAGAGAGAAA+GGG | 0.452060 | 1_3:+5577749 | None:intergenic |
ATGCTCAATGCTGTAGCATT+CGG | 0.453434 | 1_3:+5576124 | None:intergenic |
GAAGATGAAGAAATTGAAGC+TGG | 0.454897 | 1_3:-5577515 | Msa0099420:CDS |
TACAGATGATCTCTTGCATA+TGG | 0.458184 | 1_3:-5576615 | Msa0099420:intron |
GGATGGATCTGATCGGATCT+TGG | 0.461453 | 1_3:+5577810 | None:intergenic |
AATATCAACGATTCCACACT+TGG | 0.462162 | 1_3:-5575889 | Msa0099420:CDS |
TAATGTCCTGCCCATCGATT+GGG | 0.464085 | 1_3:-5572913 | Msa0099420:CDS |
ACGTTTGCAGAATATTAGAT+TGG | 0.465159 | 1_3:-5575086 | Msa0099420:CDS |
TCTGATGTGTTCTGAAGAAT+AGG | 0.465867 | 1_3:-5570341 | Msa0099420:three_prime_UTR |
ACACCTCCAAAGATATGTTT+GGG | 0.467816 | 1_3:+5575444 | None:intergenic |
GCATCAAGAAAACCAAGATT+AGG | 0.470512 | 1_3:+5575476 | None:intergenic |
TGAGTGTAACTTTGATGATC+TGG | 0.470837 | 1_3:-5576834 | Msa0099420:CDS |
TGATGTTCGCTTCTGTCCTA+AGG | 0.472083 | 1_3:-5570795 | Msa0099420:intron |
GTCGCTTGAACCTCTTTACA+AGG | 0.475184 | 1_3:-5572205 | Msa0099420:CDS |
GGGCATCACTTCTGCGTCAA+TGG | 0.475389 | 1_3:-5575279 | Msa0099420:CDS |
TTGTCCTCTCTTGACATCAC+TGG | 0.475453 | 1_3:-5573094 | Msa0099420:CDS |
ATGACCAGCAAATAAATAGA+AGG | 0.477031 | 1_3:+5576094 | None:intergenic |
TAACAATTATTATTATTACT+AGG | 0.480221 | 1_3:+5576752 | None:intergenic |
ATATGACCTTCTCCAGATAA+GGG | 0.480400 | 1_3:+5573864 | None:intergenic |
TCTATTGACTTCGGTGTCGT+TGG | 0.480572 | 1_3:-5575116 | Msa0099420:CDS |
AGGGGTAGAGAGAGAAAGTG+AGG | 0.481356 | 1_3:+5577768 | None:intergenic |
TTTACCAGCTCTTCAGGAGT+TGG | 0.481593 | 1_3:-5572175 | Msa0099420:CDS |
TCACGGTTCTCATCAGCAAC+AGG | 0.481783 | 1_3:+5577362 | None:intergenic |
GATCGGATCTTGGAGGAAGA+TGG | 0.483471 | 1_3:+5577820 | None:intergenic |
AATATGACCTTCTCCAGATA+AGG | 0.484456 | 1_3:+5573863 | None:intergenic |
GGTGAATTGGAGAGAGAAAG+GGG | 0.484885 | 1_3:+5577750 | None:intergenic |
CTCAATTAGTGGACAGGCAC+GGG | 0.485784 | 1_3:+5572946 | None:intergenic |
CCAGAGTTTGTAAGCAGTGG+CGG | 0.486315 | 1_3:-5576427 | Msa0099420:CDS |
GCTGCACGAATAGCAGCATC+AGG | 0.490307 | 1_3:+5575590 | None:intergenic |
AATTGAAGCTGGGAATTATG+AGG | 0.491329 | 1_3:-5577504 | Msa0099420:CDS |
ATCTAACCCAATCGATGGGC+AGG | 0.494620 | 1_3:+5572907 | None:intergenic |
TCTCTCAACATATTACAATC+AGG | 0.496231 | 1_3:+5575916 | None:intergenic |
AATAACCTGAAGGAATAGAT+TGG | 0.496884 | 1_3:+5571650 | None:intergenic |
CGTTTAAACTCACACGTGTA+AGG | 0.497322 | 1_3:+5572091 | None:intergenic |
TGTCAAGAGAGGACAATTAA+GGG | 0.498049 | 1_3:+5573101 | None:intergenic |
CCGATCGAGCGCCGTACAGC+AGG | 0.498303 | 1_3:+5577437 | None:intergenic |
TGTAGAGCTTGACTTCAGTT+CGG | 0.499255 | 1_3:-5573958 | Msa0099420:intron |
TTAGTCAGTCTCTCCCTTGG+TGG | 0.499323 | 1_3:-5573920 | Msa0099420:CDS |
GAAGAGAAGAGATGTTGGTT+TGG | 0.502520 | 1_3:+5577853 | None:intergenic |
ATGCCCTCAACTAGTGAAGC+TGG | 0.504093 | 1_3:-5575558 | Msa0099420:CDS |
TAGCTTGTCTCAATCTATGC+TGG | 0.504946 | 1_3:-5571810 | Msa0099420:CDS |
GGCACACTTGGCAATAAATC+GGG | 0.505217 | 1_3:-5570516 | Msa0099420:three_prime_UTR |
CGTAGGAAGTTGCAATGGAT+AGG | 0.505696 | 1_3:+5571995 | None:intergenic |
CCTGCTGTACGGCGCTCGAT+CGG | 0.507201 | 1_3:-5577437 | Msa0099420:CDS |
TTAATGTCCTGCCCATCGAT+TGG | 0.507879 | 1_3:-5572914 | Msa0099420:CDS |
AGTCTTAGAATTGTCAACAT+TGG | 0.509202 | 1_3:+5575314 | None:intergenic |
ACAGCATAAAATGTATATCA+AGG | 0.510547 | 1_3:+5570306 | None:intergenic |
TGCTTGTTCACTTGGAGAGA+AGG | 0.511142 | 1_3:-5570537 | Msa0099420:three_prime_UTR |
ACTTGGAGAGAAGGCACACT+TGG | 0.511322 | 1_3:-5570528 | Msa0099420:three_prime_UTR |
AGCTCACAGTTCTATGTTGG+AGG | 0.512932 | 1_3:-5575249 | Msa0099420:intron |
GAAATTAGCACTGCAAAAGC+AGG | 0.514012 | 1_3:-5574716 | Msa0099420:CDS |
TCGTCGTCGTTGTTCATACC+AGG | 0.516178 | 1_3:+5577566 | None:intergenic |
AAATGGAAGGTGGAAATGGA+TGG | 0.516213 | 1_3:+5577793 | None:intergenic |
AAATCCAACTCCTGAAGAGC+TGG | 0.522527 | 1_3:+5572171 | None:intergenic |
AGACCATGAGATTGTTAGGA+TGG | 0.522538 | 1_3:-5576642 | Msa0099420:CDS |
ATGTCCAGCTTCACTAGTTG+AGG | 0.524268 | 1_3:+5575554 | None:intergenic |
TGCGTTGGTGTGTGGTGGTG+AGG | 0.525110 | 1_3:-5576720 | Msa0099420:CDS |
CATTGGGAAGAGGACAGATA+GGG | 0.526364 | 1_3:-5575960 | Msa0099420:CDS |
CACGCTTATGAGACGAATCA+CGG | 0.527076 | 1_3:+5577345 | None:intergenic |
GATAAAGCATCACCTGCAAA+AGG | 0.527185 | 1_3:+5573065 | None:intergenic |
CTGCCCAAACATATCTTTGG+AGG | 0.527460 | 1_3:-5575447 | Msa0099420:intron |
TTGGTGTGTGGTGGTGAGGA+TGG | 0.527558 | 1_3:-5576716 | Msa0099420:CDS |
AATGATGTGGAAGACGGTGG+AGG | 0.528685 | 1_3:-5576692 | Msa0099420:CDS |
TTGATTCCTGGCCTGCTGTA+CGG | 0.530063 | 1_3:-5577448 | Msa0099420:CDS |
GTTGAGGTTCTGAAGTAATC+GGG | 0.533869 | 1_3:+5571942 | None:intergenic |
ATGCTTATGCCAGGTAACTC+AGG | 0.533873 | 1_3:+5572018 | None:intergenic |
CTGGAGAAGGTCATATTGGA+TGG | 0.534634 | 1_3:-5573857 | Msa0099420:CDS |
CCGCCACTGCTTACAAACTC+TGG | 0.535912 | 1_3:+5576427 | None:intergenic |
GGGAAGTTTCCTGAGTTACC+TGG | 0.537422 | 1_3:-5572027 | Msa0099420:CDS |
CAAGATGACACAGTCTCTCA+TGG | 0.541185 | 1_3:+5575839 | None:intergenic |
AAGATGAAGAAATTGAAGCT+GGG | 0.541996 | 1_3:-5577514 | Msa0099420:CDS |
TTGTTTGGCATATAGAAATG+AGG | 0.544892 | 1_3:-5570448 | Msa0099420:three_prime_UTR |
TTGAATACTGTTGCCAAGTG+TGG | 0.547986 | 1_3:+5575876 | None:intergenic |
TAATGACTCAATTAGTGGAC+AGG | 0.549074 | 1_3:+5572940 | None:intergenic |
TATATCAAAATGTACTATGT+TGG | 0.549378 | 1_3:-5570825 | Msa0099420:CDS |
GTGTCATGCGAATACAAGTC+AGG | 0.549671 | 1_3:-5575801 | Msa0099420:intron |
AGAAAGTGAGGGGAAATGGA+AGG | 0.550153 | 1_3:+5577780 | None:intergenic |
AGGAATAGATTGGTCAATCT+CGG | 0.550623 | 1_3:+5571660 | None:intergenic |
TGTAATCCCGAATTCCGGTC+CGG | 0.553122 | 1_3:-5577390 | Msa0099420:CDS |
CAGAGTTTGTAAGCAGTGGC+GGG | 0.554404 | 1_3:-5576426 | Msa0099420:CDS |
GGGGTAGAGAGAGAAAGTGA+GGG | 0.554849 | 1_3:+5577769 | None:intergenic |
CAGATAAGCTCAGCGAGTAT+GGG | 0.555131 | 1_3:-5570651 | Msa0099420:CDS |
CTGCCAGAGTTTGTAAGCAG+TGG | 0.556788 | 1_3:-5576430 | Msa0099420:CDS |
CAATTGCAGTCTATTGACTT+CGG | 0.557565 | 1_3:-5575125 | Msa0099420:CDS |
ATGGTCTCACTTGAGTTGAA+AGG | 0.559000 | 1_3:-5573147 | Msa0099420:CDS |
TCGTTAGTCAGTCTCTCCCT+TGG | 0.560848 | 1_3:-5573923 | Msa0099420:CDS |
AACTGCTCGGCAACCACCAA+GGG | 0.561608 | 1_3:+5573907 | None:intergenic |
TGGATCTGATCGGATCTTGG+AGG | 0.563884 | 1_3:+5577813 | None:intergenic |
AAGAGGTTCAAGCGACGAGT+CGG | 0.565502 | 1_3:+5572212 | None:intergenic |
TGTCCAGCTTCACTAGTTGA+GGG | 0.565601 | 1_3:+5575555 | None:intergenic |
GTTACTGCGCTTCAATGACA+TGG | 0.565980 | 1_3:+5575679 | None:intergenic |
ACAAGCAGTCATCAGTGAGT+TGG | 0.567428 | 1_3:+5572978 | None:intergenic |
ATGATGTGGAAGACGGTGGA+GGG | 0.570065 | 1_3:-5576691 | Msa0099420:CDS |
GTCATTGAAGCGCAGTAACA+TGG | 0.570348 | 1_3:-5575675 | Msa0099420:CDS |
GGTAATGATGTGGAAGACGG+TGG | 0.571021 | 1_3:-5576695 | Msa0099420:CDS |
AGTCCATCTAACCCAATCGA+TGG | 0.572678 | 1_3:+5572902 | None:intergenic |
TCACTTGAGTTGAAAGGATG+TGG | 0.574179 | 1_3:-5573141 | Msa0099420:CDS |
TTGGACAACCCACGCAGTTG+AGG | 0.574282 | 1_3:+5571926 | None:intergenic |
AAGTGAGGGGAAATGGAAGG+TGG | 0.574361 | 1_3:+5577783 | None:intergenic |
AAAGCACCACCCTTGTAAAG+AGG | 0.574646 | 1_3:+5572195 | None:intergenic |
AGGTGTCAACTTGTTGAACC+TGG | 0.576954 | 1_3:-5577584 | Msa0099420:CDS |
ATATCAAGTTCAAGCAGAAG+AGG | 0.577593 | 1_3:+5575632 | None:intergenic |
AAGCTGTAATTCACGACGAA+AGG | 0.578285 | 1_3:-5577604 | Msa0099420:CDS |
AATAGCTCACAGTTCTATGT+TGG | 0.580737 | 1_3:-5575252 | Msa0099420:CDS |
AACATGCCCTTATCTGGAGA+AGG | 0.580884 | 1_3:-5573870 | Msa0099420:CDS |
TTGAAGTGATATTGATCCGG+TGG | 0.584608 | 1_3:+5574835 | None:intergenic |
CTAAGACTTCATAGCTGTGA+GGG | 0.585297 | 1_3:-5575299 | Msa0099420:CDS |
GATCCATCCTAACAATCTCA+TGG | 0.586694 | 1_3:+5576639 | None:intergenic |
ATGGATAGGATGCTTATGCC+AGG | 0.587259 | 1_3:+5572009 | None:intergenic |
AATTTGAAGTGATATTGATC+CGG | 0.587951 | 1_3:+5574832 | None:intergenic |
TCTGTCAGCTAATTTGAAGG+AGG | 0.588127 | 1_3:-5571839 | Msa0099420:CDS |
AAACAGGCTGCAGAGTCACC+AGG | 0.590036 | 1_3:+5572825 | None:intergenic |
CTTGAACCTCTTTACAAGGG+TGG | 0.591774 | 1_3:-5572201 | Msa0099420:CDS |
CTAACTGCTCTGTACTCCAC+CGG | 0.592910 | 1_3:-5574851 | Msa0099420:CDS |
GGGTTGTCCAAATATTAGGA+AGG | 0.595090 | 1_3:-5571914 | Msa0099420:CDS |
CTTCAGAACCTCAACTGCGT+GGG | 0.595625 | 1_3:-5571934 | Msa0099420:CDS |
GTCCATCTAACCCAATCGAT+GGG | 0.595753 | 1_3:+5572903 | None:intergenic |
AGGTTCTGAAGTAATCGGGT+GGG | 0.597859 | 1_3:+5571946 | None:intergenic |
AGCAACAGGACTTTCCGGAC+CGG | 0.600596 | 1_3:+5577376 | None:intergenic |
GTGTTGAAATGGAAAATTGA+AGG | 0.602662 | 1_3:+5577728 | None:intergenic |
ACTCAATTAGTGGACAGGCA+CGG | 0.604442 | 1_3:+5572945 | None:intergenic |
TGGGTTGCTCATTTGACACA+TGG | 0.607349 | 1_3:+5571965 | None:intergenic |
TATCAAGTTCAAGCAGAAGA+GGG | 0.608116 | 1_3:+5575633 | None:intergenic |
GTGTTGAAGAGAAGAGATGT+TGG | 0.611227 | 1_3:+5577848 | None:intergenic |
GCTCAAGAGTAGTAACTGCT+CGG | 0.614721 | 1_3:+5573894 | None:intergenic |
CTTGAGTTGAAAGGATGTGG+TGG | 0.616766 | 1_3:-5573138 | Msa0099420:CDS |
GGGTAGAGAGAGAAAGTGAG+GGG | 0.618569 | 1_3:+5577770 | None:intergenic |
GAGGTTCTGAAGTAATCGGG+TGG | 0.620687 | 1_3:+5571945 | None:intergenic |
TGGTGAGGATGGTAATGATG+TGG | 0.622988 | 1_3:-5576705 | Msa0099420:CDS |
ATTGGGAAGAGGACAGATAG+GGG | 0.626388 | 1_3:-5575959 | Msa0099420:CDS |
GATGGTAATGATGTGGAAGA+CGG | 0.631591 | 1_3:-5576698 | Msa0099420:CDS |
ACTTCAGAACCTCAACTGCG+TGG | 0.633478 | 1_3:-5571935 | Msa0099420:CDS |
TGGAAATGGATGGATCTGAT+CGG | 0.639938 | 1_3:+5577803 | None:intergenic |
GGCGTGCAATATTGACGAGG+AGG | 0.640334 | 1_3:-5570861 | Msa0099420:CDS |
GAATATGCATGATTTAAACT+GGG | 0.641737 | 1_3:-5572061 | Msa0099420:CDS |
TGTTGAAATGGAAAATTGAA+GGG | 0.641875 | 1_3:+5577729 | None:intergenic |
TAACTGCTCGGCAACCACCA+AGG | 0.642627 | 1_3:+5573906 | None:intergenic |
TAAATTTGGGAGCCAATGCA+GGG | 0.642950 | 1_3:+5572874 | None:intergenic |
AGAACTAGTGATTTCAACAT+GGG | 0.643077 | 1_3:+5574580 | None:intergenic |
AATCTAATATTCTGCAAACG+TGG | 0.648461 | 1_3:+5575088 | None:intergenic |
TCGCTTGAACCTCTTTACAA+GGG | 0.652251 | 1_3:-5572204 | Msa0099420:CDS |
TAGCTTCAAAACTTCCAATG+AGG | 0.654384 | 1_3:+5571689 | None:intergenic |
ACTAGTTCTTGATAATTGCG+AGG | 0.661698 | 1_3:-5574566 | Msa0099420:intron |
GCATCCAGTGATGTCAAGAG+AGG | 0.670741 | 1_3:+5573090 | None:intergenic |
TTACAGTCGAGGACATGTGT+AGG | 0.670828 | 1_3:-5576153 | Msa0099420:intron |
AAGAACTAGTGATTTCAACA+TGG | 0.675696 | 1_3:+5574579 | None:intergenic |
TCTAAGACTTCATAGCTGTG+AGG | 0.677515 | 1_3:-5575300 | Msa0099420:CDS |
ACCGGAATTCGGGATTACAG+CGG | 0.685212 | 1_3:+5577394 | None:intergenic |
TTAGGCGTGCAATATTGACG+AGG | 0.699170 | 1_3:-5570864 | Msa0099420:intron |
AATATGCATGATTTAAACTG+GGG | 0.702634 | 1_3:-5572060 | Msa0099420:CDS |
ATATGCATGATTTAAACTGG+GGG | 0.730286 | 1_3:-5572059 | Msa0099420:CDS |
CCATTAACATCGCTTCAATG+CGG | 0.731007 | 1_3:+5573166 | None:intergenic |
AAGGGAGAGACTGACTAACG+AGG | 0.754568 | 1_3:+5573925 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAATGCATTTTTTTTTATT+TGG | - | chr1_3:5570894-5570913 | Msa0099420:intron | 10.0% |
!!! | AAATGCATTTTTTTTTATTT+GGG | - | chr1_3:5570895-5570914 | Msa0099420:intron | 10.0% |
!! | TAACAATTATTATTATTACT+AGG | + | chr1_3:5571426-5571445 | None:intergenic | 10.0% |
!! | AGTAATAATAATAATTGTTA+TGG | - | chr1_3:5571426-5571445 | Msa0099420:intron | 10.0% |
!! | AAAATTAATCAGATAAATTA+AGG | + | chr1_3:5573234-5573253 | None:intergenic | 10.0% |
!!! | ACATTTTTTTTTTTCATATT+CGG | - | chr1_3:5574183-5574202 | Msa0099420:intron | 10.0% |
!! | AATTAAAATTACAGAATAAT+AGG | - | chr1_3:5574527-5574546 | Msa0099420:intron | 10.0% |
!! | TTTGATAAAATTTGTAAAAT+AGG | - | chr1_3:5574862-5574881 | Msa0099420:CDS | 10.0% |
!! | AAGGTTTAAAAATAATAAAT+GGG | + | chr1_3:5576314-5576333 | None:intergenic | 10.0% |
!! | AAAGGTTTAAAAATAATAAA+TGG | + | chr1_3:5576315-5576334 | None:intergenic | 10.0% |
!!! | TATCTTTTTAGAAAATTATA+CGG | - | chr1_3:5577005-5577024 | Msa0099420:intron | 10.0% |
!!! | TACATTTTTCTTAAAAATTT+AGG | - | chr1_3:5577089-5577108 | Msa0099420:intron | 10.0% |
!!! | ACATTTTTCTTAAAAATTTA+GGG | - | chr1_3:5577090-5577109 | Msa0099420:intron | 10.0% |
!! | AATGATACCAATATAAAAAA+TGG | + | chr1_3:5571604-5571623 | None:intergenic | 15.0% |
!!! | TTTCTTTATTTGTGAAATTT+AGG | - | chr1_3:5571686-5571705 | Msa0099420:CDS | 15.0% |
!!! | TATCTGATTAATTTTTTGAA+TGG | - | chr1_3:5573239-5573258 | Msa0099420:intron | 15.0% |
!!! | CATGAACATATATATTATTT+TGG | - | chr1_3:5573634-5573653 | Msa0099420:intron | 15.0% |
!!! | TATATTTTGACAATTCAAAT+GGG | - | chr1_3:5573710-5573729 | Msa0099420:intron | 15.0% |
!!! | TATAACATAAAAAAGTACAT+TGG | + | chr1_3:5573870-5573889 | None:intergenic | 15.0% |
!!! | ATGTTTTATATTCGTATTAA+TGG | - | chr1_3:5574158-5574177 | Msa0099420:intron | 15.0% |
!! | ATATACTTCAAAATTTATTG+TGG | - | chr1_3:5576623-5576642 | Msa0099420:CDS | 15.0% |
!! | ATTCTATTGTATATACTTAT+TGG | - | chr1_3:5576703-5576722 | Msa0099420:CDS | 15.0% |
!! | TTCTATTGTATATACTTATT+GGG | - | chr1_3:5576704-5576723 | Msa0099420:CDS | 15.0% |
!!! | ATATTTTGAAATGTTGATTT+CGG | - | chr1_3:5577421-5577440 | Msa0099420:CDS | 15.0% |
!! | ATAACAATTTACAATACATT+AGG | + | chr1_3:5577690-5577709 | None:intergenic | 15.0% |
!!! | GAAAGAACCATTTTTTATAT+TGG | - | chr1_3:5571594-5571613 | Msa0099420:intron | 20.0% |
!!! | TTTTTGTGTGTTATGATATT+TGG | - | chr1_3:5571642-5571661 | Msa0099420:intron | 20.0% |
!!! | TTTTGTGTGTTATGATATTT+GGG | - | chr1_3:5571643-5571662 | Msa0099420:intron | 20.0% |
!!! | AGAGTTTGAATTTTGAAAAT+CGG | - | chr1_3:5571799-5571818 | Msa0099420:CDS | 20.0% |
!! | AGTATGACAAATATCAATAA+TGG | + | chr1_3:5573172-5573191 | None:intergenic | 20.0% |
!! | TAATCAGATAAATTAAGGAT+TGG | + | chr1_3:5573229-5573248 | None:intergenic | 20.0% |
!!! | TATATTATTTTGGCATTTCT+TGG | - | chr1_3:5573644-5573663 | Msa0099420:intron | 20.0% |
!!! | CTATATTTTGACAATTCAAA+TGG | - | chr1_3:5573709-5573728 | Msa0099420:intron | 20.0% |
!! | AAATTTCAATCAGTAAGTTA+TGG | + | chr1_3:5573827-5573846 | None:intergenic | 20.0% |
!! | ATTGGTATTATAGAAACAAT+GGG | + | chr1_3:5573852-5573871 | None:intergenic | 20.0% |
!! | GGAAGAAGAAATAAAAATTT+CGG | + | chr1_3:5574473-5574492 | None:intergenic | 20.0% |
!! | AATATTAATGACTCAATTAG+TGG | + | chr1_3:5575243-5575262 | None:intergenic | 20.0% |
!! | CTGATGAAAAATCAAATAAA+TGG | + | chr1_3:5575664-5575683 | None:intergenic | 20.0% |
!! | TTCTTTAGACAAAATAATCT+TGG | + | chr1_3:5575793-5575812 | None:intergenic | 20.0% |
!!! | AAACATTATAATTTGCTATG+AGG | + | chr1_3:5576442-5576461 | None:intergenic | 20.0% |
!!! | AATTTAGAATTTACAACTGT+CGG | - | chr1_3:5576907-5576926 | Msa0099420:intron | 20.0% |
!!! | TTTCTTAAAAATTTAGGGTA+TGG | - | chr1_3:5577095-5577114 | Msa0099420:intron | 20.0% |
!!! | TTCTTAAAAATTTAGGGTAT+GGG | - | chr1_3:5577096-5577115 | Msa0099420:intron | 20.0% |
!!! | TCAAATGTCACATTTATTTT+AGG | + | chr1_3:5577140-5577159 | None:intergenic | 20.0% |
!! | TATATCAAAATGTACTATGT+TGG | - | chr1_3:5577350-5577369 | Msa0099420:CDS | 20.0% |
!! | AACAATCATATGCAAAATAA+AGG | + | chr1_3:5577457-5577476 | None:intergenic | 20.0% |
!!! | ATCATTTATGGGATATTTTA+TGG | - | chr1_3:5577494-5577513 | Msa0099420:CDS | 20.0% |
!!! | TTATAATCTATGATGTTTTG+TGG | - | chr1_3:5577615-5577634 | Msa0099420:CDS | 20.0% |
!! | TTTATATTGTTGTGTTTGTT+TGG | - | chr1_3:5577712-5577731 | Msa0099420:five_prime_UTR | 20.0% |
!! | AAAACATCAAAAACTTATTG+TGG | + | chr1_3:5577769-5577788 | None:intergenic | 20.0% |
! | TGTTGAAATGGAAAATTGAA+GGG | + | chr1_3:5570449-5570468 | None:intergenic | 25.0% |
! | TGAATTGTTGTGAAATGAAT+TGG | - | chr1_3:5570949-5570968 | Msa0099420:intron | 25.0% |
!!! | GAGTTTGAATTTTGAAAATC+GGG | - | chr1_3:5571800-5571819 | Msa0099420:CDS | 25.0% |
!!! | ACCTTTTAACATTCAAGTTT+TGG | - | chr1_3:5571902-5571921 | Msa0099420:CDS | 25.0% |
!!! | CCTTTTAACATTCAAGTTTT+GGG | - | chr1_3:5571903-5571922 | Msa0099420:CDS | 25.0% |
!!! | TGATTTGTTTCATTCTTTTC+AGG | - | chr1_3:5572176-5572195 | Msa0099420:CDS | 25.0% |
!!! | AATCTTGAGGTTTTAACATT+GGG | - | chr1_3:5572199-5572218 | Msa0099420:CDS | 25.0% |
! | ATTGATACGATAAAAAGTGA+TGG | - | chr1_3:5572439-5572458 | Msa0099420:intron | 25.0% |
!!! | GATGGTTTATTCTTTTTTTC+AGG | - | chr1_3:5572457-5572476 | Msa0099420:intron | 25.0% |
!! | ATGTTATTTGTTCCAGATAT+TGG | - | chr1_3:5572950-5572969 | Msa0099420:CDS | 25.0% |
!! | AATGGAATTTTGTGTTTTCT+GGG | + | chr1_3:5573154-5573173 | None:intergenic | 25.0% |
!! | TAATGGAATTTTGTGTTTTC+TGG | + | chr1_3:5573155-5573174 | None:intergenic | 25.0% |
!!! | AATTTTTTGAATGGTTTCCT+TGG | - | chr1_3:5573248-5573267 | Msa0099420:intron | 25.0% |
!! | AATTTGAAGTGATATTGATC+CGG | + | chr1_3:5573346-5573365 | None:intergenic | 25.0% |
! | TACTATACAATATGAGAATG+TGG | + | chr1_3:5573407-5573426 | None:intergenic | 25.0% |
! | TAAATACAGTAAGAATTGTG+TGG | + | chr1_3:5573766-5573785 | None:intergenic | 25.0% |
! | CATTGGTATTATAGAAACAA+TGG | + | chr1_3:5573853-5573872 | None:intergenic | 25.0% |
!!! | AGTTTCTGAAATGGTATTTT+TGG | - | chr1_3:5573909-5573928 | Msa0099420:CDS | 25.0% |
! | AATAAAAAATGTTTCAGCAG+TGG | - | chr1_3:5574059-5574078 | Msa0099420:intron | 25.0% |
! | ATAAAAAATGTTTCAGCAGT+GGG | - | chr1_3:5574060-5574079 | Msa0099420:intron | 25.0% |
! | ATTAGGTTTCTTTAAATTCC+TGG | - | chr1_3:5574120-5574139 | Msa0099420:intron | 25.0% |
!! | TTAAATTCCTGGTATTTTGT+CGG | - | chr1_3:5574131-5574150 | Msa0099420:intron | 25.0% |
! | ATATATCAGTATCACTTACA+GGG | + | chr1_3:5574374-5574393 | None:intergenic | 25.0% |
! | AATATATCAGTATCACTTAC+AGG | + | chr1_3:5574375-5574394 | None:intergenic | 25.0% |
!! | AATAATCGAAGTACTCAATA+GGG | + | chr1_3:5574445-5574464 | None:intergenic | 25.0% |
!! | TAATAATCGAAGTACTCAAT+AGG | + | chr1_3:5574446-5574465 | None:intergenic | 25.0% |
! | TTCATATATTTCATTCCTAG+AGG | - | chr1_3:5574603-5574622 | Msa0099420:CDS | 25.0% |
! | AGTAACGATTTGTATCTATT+GGG | + | chr1_3:5574712-5574731 | None:intergenic | 25.0% |
! | TCAAATCTTTACTAAGAAAG+TGG | + | chr1_3:5574847-5574866 | None:intergenic | 25.0% |
!! | GCTTTTATTAAAACATAACG+TGG | - | chr1_3:5575526-5575545 | Msa0099420:CDS | 25.0% |
! | AACGTGGTAATAATGTTAAT+TGG | - | chr1_3:5575542-5575561 | Msa0099420:CDS | 25.0% |
!!! | GTAACATTTTTGTTTCTTGA+AGG | - | chr1_3:5575910-5575929 | Msa0099420:CDS | 25.0% |
! | TGAATATGCATGATTTAAAC+TGG | - | chr1_3:5576113-5576132 | Msa0099420:CDS | 25.0% |
! | GAATATGCATGATTTAAACT+GGG | - | chr1_3:5576114-5576133 | Msa0099420:CDS | 25.0% |
! | AATATGCATGATTTAAACTG+GGG | - | chr1_3:5576115-5576134 | Msa0099420:CDS | 25.0% |
! | ATGAAAACCTTCCTAATATT+TGG | + | chr1_3:5576271-5576290 | None:intergenic | 25.0% |
! | AGATAAGAATAATAACCTGA+AGG | + | chr1_3:5576538-5576557 | None:intergenic | 25.0% |
!! | ACAAGTGAATTTTACCAAAT+AGG | - | chr1_3:5576820-5576839 | Msa0099420:CDS | 25.0% |
!! | TTACATTTTATAGCTGTCAT+TGG | - | chr1_3:5576975-5576994 | Msa0099420:intron | 25.0% |
!! | TCTTAAAAATTTAGGGTATG+GGG | - | chr1_3:5577097-5577116 | Msa0099420:intron | 25.0% |
! | GATATTCGTCAAATTATTTG+AGG | - | chr1_3:5577158-5577177 | Msa0099420:intron | 25.0% |
! | TTAACACAACAATGAATCAA+AGG | + | chr1_3:5577240-5577259 | None:intergenic | 25.0% |
!!! | TTGGACAATTTGGTTTTTTT+AGG | - | chr1_3:5577293-5577312 | Msa0099420:intron | 25.0% |
! | GATGTTCTTCAATCATTTAT+GGG | - | chr1_3:5577483-5577502 | Msa0099420:CDS | 25.0% |
! | ACAGCATAAAATGTATATCA+AGG | + | chr1_3:5577872-5577891 | None:intergenic | 25.0% |
TAAAAACGATGTCGTTGAAA+TGG | - | chr1_3:5570244-5570263 | Msa0099420:three_prime_UTR | 30.0% | |
TCCTCTTCTAACAAAAAAGT+AGG | - | chr1_3:5570271-5570290 | Msa0099420:three_prime_UTR | 30.0% | |
!!! | TCCTACTTTTTTGTTAGAAG+AGG | + | chr1_3:5570275-5570294 | None:intergenic | 30.0% |
GTGTTGAAATGGAAAATTGA+AGG | + | chr1_3:5570450-5570469 | None:intergenic | 30.0% | |
! | TTTTCGAAGATGTGTTGAAA+TGG | + | chr1_3:5570461-5570480 | None:intergenic | 30.0% |
TCAACACATCTTCGAAAATT+AGG | - | chr1_3:5570463-5570482 | Msa0099420:three_prime_UTR | 30.0% | |
CAACACATCTTCGAAAATTA+GGG | - | chr1_3:5570464-5570483 | Msa0099420:three_prime_UTR | 30.0% | |
AAGATGAAGAAATTGAAGCT+GGG | - | chr1_3:5570661-5570680 | Msa0099420:intron | 30.0% | |
! | GGAATTATGAGGAGAATTTT+CGG | - | chr1_3:5570682-5570701 | Msa0099420:intron | 30.0% |
TTGTGAAATGAATTGGAAAG+TGG | - | chr1_3:5570956-5570975 | Msa0099420:intron | 30.0% | |
! | ACATGCATTGTTATTAGAGA+AGG | - | chr1_3:5571185-5571204 | Msa0099420:intron | 30.0% |
TTGAGAAATGAAGTGAAAAG+TGG | - | chr1_3:5571216-5571235 | Msa0099420:intron | 30.0% | |
! | ATGAAGATGATGATGTTTGA+CGG | - | chr1_3:5571296-5571315 | Msa0099420:intron | 30.0% |
!! | ATGGATTATGCAGATTTTGA+CGG | - | chr1_3:5571390-5571409 | Msa0099420:intron | 30.0% |
AATTTAGGTCTTCTCATTTC+TGG | - | chr1_3:5571701-5571720 | Msa0099420:intron | 30.0% | |
CCCAAAACTTGAATGTTAAA+AGG | + | chr1_3:5571906-5571925 | None:intergenic | 30.0% | |
!!! | AACATTCAAGTTTTGGGTAT+TGG | - | chr1_3:5571909-5571928 | Msa0099420:CDS | 30.0% |
ATGACCAGCAAATAAATAGA+AGG | + | chr1_3:5572084-5572103 | None:intergenic | 30.0% | |
! | TATTTATTTGCTGGTCATGA+AGG | - | chr1_3:5572086-5572105 | Msa0099420:CDS | 30.0% |
AAAGAATGAAACAAATCAGC+TGG | + | chr1_3:5572174-5572193 | None:intergenic | 30.0% | |
!! | GAATCTTGAGGTTTTAACAT+TGG | - | chr1_3:5572198-5572217 | Msa0099420:CDS | 30.0% |
TCTCTCAACATATTACAATC+AGG | + | chr1_3:5572262-5572281 | None:intergenic | 30.0% | |
ATAAAATGACAGCTATGTGT+CGG | + | chr1_3:5572421-5572440 | None:intergenic | 30.0% | |
!!! | AATGACATGGTTTTAAGTTG+CGG | + | chr1_3:5572486-5572505 | None:intergenic | 30.0% |
GTCTTAGAATTGTCAACATT+GGG | + | chr1_3:5572863-5572882 | None:intergenic | 30.0% | |
AGTCTTAGAATTGTCAACAT+TGG | + | chr1_3:5572864-5572883 | None:intergenic | 30.0% | |
ACATCGTTAATACCAATATC+TGG | + | chr1_3:5572965-5572984 | None:intergenic | 30.0% | |
AATCTAATATTCTGCAAACG+TGG | + | chr1_3:5573090-5573109 | None:intergenic | 30.0% | |
ACGTTTGCAGAATATTAGAT+TGG | - | chr1_3:5573089-5573108 | Msa0099420:CDS | 30.0% | |
! | ATGGAATTTTGTGTTTTCTG+GGG | + | chr1_3:5573153-5573172 | None:intergenic | 30.0% |
TTCTTAAACATCAAGTACAC+AGG | + | chr1_3:5573201-5573220 | None:intergenic | 30.0% | |
TAATTTCTGCATAACCACAA+AGG | + | chr1_3:5573446-5573465 | None:intergenic | 30.0% | |
!!! | GTATGTGATGTTTTTAGTGA+CGG | - | chr1_3:5573562-5573581 | Msa0099420:intron | 30.0% |
AGAACTAGTGATTTCAACAT+GGG | + | chr1_3:5573598-5573617 | None:intergenic | 30.0% | |
AAGAACTAGTGATTTCAACA+TGG | + | chr1_3:5573599-5573618 | None:intergenic | 30.0% | |
TGTTGTATTTGTGACAGATT+AGG | - | chr1_3:5574103-5574122 | Msa0099420:intron | 30.0% | |
TTCACATGATCAACTCAAAA+GGG | + | chr1_3:5574494-5574513 | None:intergenic | 30.0% | |
ATATATTTCATTCCTAGAGG+AGG | - | chr1_3:5574606-5574625 | Msa0099420:CDS | 30.0% | |
ATCAGCATGTTAAGATACAT+TGG | - | chr1_3:5574665-5574684 | Msa0099420:CDS | 30.0% | |
GAGTAACGATTTGTATCTAT+TGG | + | chr1_3:5574713-5574732 | None:intergenic | 30.0% | |
TTGGTTACACAAATTTCAGT+GGG | + | chr1_3:5574796-5574815 | None:intergenic | 30.0% | |
!!! | TGTAACCAACTGCTTTTTAT+TGG | - | chr1_3:5574807-5574826 | Msa0099420:intron | 30.0% |
ATCTTTACTAAGAAAGTGGT+TGG | + | chr1_3:5574843-5574862 | None:intergenic | 30.0% | |
!! | TGCGGAGTATGTTTAATTTT+GGG | + | chr1_3:5574994-5575013 | None:intergenic | 30.0% |
!! | ATGCGGAGTATGTTTAATTT+TGG | + | chr1_3:5574995-5575014 | None:intergenic | 30.0% |
AATCAAGCAGAGCTAAATTT+GGG | + | chr1_3:5575317-5575336 | None:intergenic | 30.0% | |
AAATCAAGCAGAGCTAAATT+TGG | + | chr1_3:5575318-5575337 | None:intergenic | 30.0% | |
TGATTTATCATACACTTTCC+TGG | - | chr1_3:5575332-5575351 | Msa0099420:intron | 30.0% | |
TGTTTACAAGAGTCAAAAAC+AGG | + | chr1_3:5575369-5575388 | None:intergenic | 30.0% | |
TGACTCTTGTAAACAACTAA+AGG | - | chr1_3:5575374-5575393 | Msa0099420:intron | 30.0% | |
AAGTGAGGGTTAATGTTATT+TGG | - | chr1_3:5575504-5575523 | Msa0099420:CDS | 30.0% | |
ATACATCATTCCATAATCTG+TGG | + | chr1_3:5575855-5575874 | None:intergenic | 30.0% | |
! | TTCTCTTTTCCTTTTTCTGA+CGG | - | chr1_3:5575888-5575907 | Msa0099420:CDS | 30.0% |
AAAATGTTACCGTCAGAAAA+AGG | + | chr1_3:5575900-5575919 | None:intergenic | 30.0% | |
ATATGCATGATTTAAACTGG+GGG | - | chr1_3:5576116-5576135 | Msa0099420:CDS | 30.0% | |
AATAACCTGAAGGAATAGAT+TGG | + | chr1_3:5576528-5576547 | None:intergenic | 30.0% | |
AACAACAATTATGATGTGTG+TGG | + | chr1_3:5576576-5576595 | None:intergenic | 30.0% | |
ATCTCTATTATGTTGGAACT+GGG | + | chr1_3:5576765-5576784 | None:intergenic | 30.0% | |
AATCTCTATTATGTTGGAAC+TGG | + | chr1_3:5576766-5576785 | None:intergenic | 30.0% | |
AGTCTCAATCTCTATTATGT+TGG | + | chr1_3:5576772-5576791 | None:intergenic | 30.0% | |
TCTAAATTGTAATGCAGTGA+AGG | + | chr1_3:5576895-5576914 | None:intergenic | 30.0% | |
!!! | GTCACATTTATTTTAGGTGA+AGG | + | chr1_3:5577134-5577153 | None:intergenic | 30.0% |
ACAACAATGAATCAAAGGAT+GGG | + | chr1_3:5577235-5577254 | None:intergenic | 30.0% | |
CTTATATGTTTGTTCGTGTT+TGG | - | chr1_3:5577274-5577293 | Msa0099420:intron | 30.0% | |
! | TTTTGCATATGATTGTTGCT+TGG | - | chr1_3:5577460-5577479 | Msa0099420:CDS | 30.0% |
! | TTTGCATATGATTGTTGCTT+GGG | - | chr1_3:5577461-5577480 | Msa0099420:CDS | 30.0% |
GGATGTTCTTCAATCATTTA+TGG | - | chr1_3:5577482-5577501 | Msa0099420:CDS | 30.0% | |
TTGTTTGGCATATAGAAATG+AGG | - | chr1_3:5577727-5577746 | Msa0099420:five_prime_UTR | 30.0% | |
TGGAAAATTGAAGGGTGAAT+TGG | + | chr1_3:5570441-5570460 | None:intergenic | 35.0% | |
! | AACGACGACGAAGATATTTT+CGG | - | chr1_3:5570621-5570640 | Msa0099420:CDS | 35.0% |
GAAGATGAAGAAATTGAAGC+TGG | - | chr1_3:5570660-5570679 | Msa0099420:intron | 35.0% | |
AATTGAAGCTGGGAATTATG+AGG | - | chr1_3:5570671-5570690 | Msa0099420:intron | 35.0% | |
!! | GGAGAGAGTTTTTGATTGAT+GGG | - | chr1_3:5570703-5570722 | Msa0099420:intron | 35.0% |
! | TGAAGATGATGATGTTTGAC+GGG | - | chr1_3:5571297-5571316 | Msa0099420:intron | 35.0% |
! | TGAGTGTAACTTTGATGATC+TGG | - | chr1_3:5571341-5571360 | Msa0099420:intron | 35.0% |
TTGAAGACCATGAGATTGTT+AGG | - | chr1_3:5571529-5571548 | Msa0099420:intron | 35.0% | |
TACAGATGATCTCTTGCATA+TGG | - | chr1_3:5571560-5571579 | Msa0099420:intron | 35.0% | |
CCAAAAATCTTCATGTGTAC+TGG | + | chr1_3:5571778-5571797 | None:intergenic | 35.0% | |
! | CCAGTACACATGAAGATTTT+TGG | - | chr1_3:5571775-5571794 | Msa0099420:intron | 35.0% |
TCAATGTGTAATTACAGTCG+AGG | - | chr1_3:5572011-5572030 | Msa0099420:CDS | 35.0% | |
AGGACCTTCTATTTATTTGC+TGG | - | chr1_3:5572077-5572096 | Msa0099420:CDS | 35.0% | |
TGAAGGCAATCTCTTTGTTA+AGG | - | chr1_3:5572103-5572122 | Msa0099420:CDS | 35.0% | |
!! | CATTCTTTTCAGGAATCTTG+AGG | - | chr1_3:5572186-5572205 | Msa0099420:CDS | 35.0% |
AATATCAACGATTCCACACT+TGG | - | chr1_3:5572286-5572305 | Msa0099420:intron | 35.0% | |
!!! | ATGACATGGTTTTAAGTTGC+GGG | + | chr1_3:5572485-5572504 | None:intergenic | 35.0% |
TATCAAGTTCAAGCAGAAGA+GGG | + | chr1_3:5572545-5572564 | None:intergenic | 35.0% | |
ATATCAAGTTCAAGCAGAAG+AGG | + | chr1_3:5572546-5572565 | None:intergenic | 35.0% | |
CTTCTGCTTGAACTTGATAT+AGG | - | chr1_3:5572546-5572565 | Msa0099420:intron | 35.0% | |
GCATCAAGAAAACCAAGATT+AGG | + | chr1_3:5572702-5572721 | None:intergenic | 35.0% | |
ATACTGCCCAAACATATCTT+TGG | - | chr1_3:5572725-5572744 | Msa0099420:intron | 35.0% | |
ACACCTCCAAAGATATGTTT+GGG | + | chr1_3:5572734-5572753 | None:intergenic | 35.0% | |
CGAACAGACTTAAAAGAGAA+AGG | + | chr1_3:5572837-5572856 | None:intergenic | 35.0% | |
AATAGCTCACAGTTCTATGT+TGG | - | chr1_3:5572923-5572942 | Msa0099420:CDS | 35.0% | |
!! | CAATTGCAGTCTATTGACTT+CGG | - | chr1_3:5573050-5573069 | Msa0099420:intron | 35.0% |
! | TGGAATTTTGTGTTTTCTGG+GGG | + | chr1_3:5573152-5573171 | None:intergenic | 35.0% |
ATGCCAATCTTTACAAGAAG+TGG | - | chr1_3:5573507-5573526 | Msa0099420:intron | 35.0% | |
GATCCACTTCTTGTAAAGAT+TGG | + | chr1_3:5573513-5573532 | None:intergenic | 35.0% | |
! | ACTAGTTCTTGATAATTGCG+AGG | - | chr1_3:5573609-5573628 | Msa0099420:intron | 35.0% |
ACAGTAAGAATTGTGTGGAA+AGG | + | chr1_3:5573761-5573780 | None:intergenic | 35.0% | |
! | CTCACTTGAAGTTTCTGAAA+TGG | - | chr1_3:5573900-5573919 | Msa0099420:CDS | 35.0% |
CTGTCACAAATACAACAAAC+AGG | + | chr1_3:5574100-5574119 | None:intergenic | 35.0% | |
ATATGACCTTCTCCAGATAA+GGG | + | chr1_3:5574314-5574333 | None:intergenic | 35.0% | |
AATATGACCTTCTCCAGATA+AGG | + | chr1_3:5574315-5574334 | None:intergenic | 35.0% | |
TTATCTGGAGAAGGTCATAT+TGG | - | chr1_3:5574314-5574333 | Msa0099420:intron | 35.0% | |
ATTGGATGGTTGTGATCATT+TGG | - | chr1_3:5574332-5574351 | Msa0099420:intron | 35.0% | |
! | CACAGTTCGATTTTTATGAG+AGG | - | chr1_3:5574403-5574422 | Msa0099420:intron | 35.0% |
CTTCACATGATCAACTCAAA+AGG | + | chr1_3:5574495-5574514 | None:intergenic | 35.0% | |
TAACATGCTGATAATAACCG+TGG | + | chr1_3:5574657-5574676 | None:intergenic | 35.0% | |
GAGATTTGTGTTAAGCTTCA+AGG | + | chr1_3:5574747-5574766 | None:intergenic | 35.0% | |
ACACAAATCTCGATTCATTG+TGG | - | chr1_3:5574756-5574775 | Msa0099420:intron | 35.0% | |
GTTGGTTACACAAATTTCAG+TGG | + | chr1_3:5574797-5574816 | None:intergenic | 35.0% | |
CCTGAGAAGTAGATGAAAAA+CGG | + | chr1_3:5574940-5574959 | None:intergenic | 35.0% | |
! | TTTTCATCTACTTCTCAGGT+TGG | - | chr1_3:5574941-5574960 | Msa0099420:intron | 35.0% |
TGTCAAGAGAGGACAATTAA+GGG | + | chr1_3:5575077-5575096 | None:intergenic | 35.0% | |
ATGTCAAGAGAGGACAATTA+AGG | + | chr1_3:5575078-5575097 | None:intergenic | 35.0% | |
! | TGCTTTATCTGCTAGTTTCT+TGG | - | chr1_3:5575124-5575143 | Msa0099420:CDS | 35.0% |
TTGGTTATCCTGCTTATGTA+TGG | - | chr1_3:5575143-5575162 | Msa0099420:intron | 35.0% | |
TACATACTCCATACATAAGC+AGG | + | chr1_3:5575154-5575173 | None:intergenic | 35.0% | |
! | TAATGACTCAATTAGTGGAC+AGG | + | chr1_3:5575238-5575257 | None:intergenic | 35.0% |
!!! | CGTAGATTTGTTTTGAGGAT+GGG | + | chr1_3:5575483-5575502 | None:intergenic | 35.0% |
CCATCCTCAAAACAAATCTA+CGG | - | chr1_3:5575481-5575500 | Msa0099420:CDS | 35.0% | |
!!! | ACTTCCGTAGATTTGTTTTG+AGG | + | chr1_3:5575488-5575507 | None:intergenic | 35.0% |
AAAACAAATCTACGGAAGTG+AGG | - | chr1_3:5575489-5575508 | Msa0099420:CDS | 35.0% | |
AAACAAATCTACGGAAGTGA+GGG | - | chr1_3:5575490-5575509 | Msa0099420:CDS | 35.0% | |
TTGTGTGTCTTCATTGTTTC+AGG | + | chr1_3:5575710-5575729 | None:intergenic | 35.0% | |
ATGAAGACACACAAACTAAC+AGG | - | chr1_3:5575716-5575735 | Msa0099420:intron | 35.0% | |
CACACAAACTAACAGGAAAA+TGG | - | chr1_3:5575723-5575742 | Msa0099420:intron | 35.0% | |
AACAGGAAAATGGAGATAGA+AGG | - | chr1_3:5575733-5575752 | Msa0099420:intron | 35.0% | |
ACAGGAAAATGGAGATAGAA+GGG | - | chr1_3:5575734-5575753 | Msa0099420:intron | 35.0% | |
AAAAGAGTGAGAGGAAAAGT+GGG | - | chr1_3:5575762-5575781 | Msa0099420:intron | 35.0% | |
ACACTTGCTTACTCATTTCT+CGG | - | chr1_3:5575828-5575847 | Msa0099420:CDS | 35.0% | |
ACAAGAAAGAAGCTCTTCTA+TGG | + | chr1_3:5576056-5576075 | None:intergenic | 35.0% | |
CTTACACGTGTGAGTTTAAA+CGG | - | chr1_3:5576085-5576104 | Msa0099420:CDS | 35.0% | |
!! | AGTTGAGGTTCTGAAGTAAT+CGG | + | chr1_3:5576237-5576256 | None:intergenic | 35.0% |
TCAAATTAGCTGACAGAGAA+AGG | + | chr1_3:5576333-5576352 | None:intergenic | 35.0% | |
TTCTCTGTCAGCTAATTTGA+AGG | - | chr1_3:5576333-5576352 | Msa0099420:intron | 35.0% | |
!! | ATCTATGCTGGCTTAATCTA+AGG | - | chr1_3:5576377-5576396 | Msa0099420:CDS | 35.0% |
TAGCTTCAAAACTTCCAATG+AGG | + | chr1_3:5576489-5576508 | None:intergenic | 35.0% | |
! | AGGAATAGATTGGTCAATCT+CGG | + | chr1_3:5576518-5576537 | None:intergenic | 35.0% |
ATTGACCAATCTATTCCTTC+AGG | - | chr1_3:5576520-5576539 | Msa0099420:intron | 35.0% | |
AATAGAGATTGAGACTTGCA+TGG | - | chr1_3:5576776-5576795 | Msa0099420:CDS | 35.0% | |
!!! | ATCCGTCTGCTTTTTAAGAA+TGG | - | chr1_3:5577060-5577079 | Msa0099420:intron | 35.0% |
!!! | TCCGTCTGCTTTTTAAGAAT+GGG | - | chr1_3:5577061-5577080 | Msa0099420:intron | 35.0% |
!!! | TTATTTTAGGTGAAGGACAG+AGG | + | chr1_3:5577127-5577146 | None:intergenic | 35.0% |
CACAACAATGAATCAAAGGA+TGG | + | chr1_3:5577236-5577255 | None:intergenic | 35.0% | |
TTGTTCGTGTTTGGACAATT+TGG | - | chr1_3:5577283-5577302 | Msa0099420:intron | 35.0% | |
!! | TCTGATGTGTTCTGAAGAAT+AGG | - | chr1_3:5577834-5577853 | Msa0099420:five_prime_UTR | 35.0% |
! | GAAGAGAAGAGATGTTGGTT+TGG | + | chr1_3:5570325-5570344 | None:intergenic | 40.0% |
GTGTTGAAGAGAAGAGATGT+TGG | + | chr1_3:5570330-5570349 | None:intergenic | 40.0% | |
TGGAAATGGATGGATCTGAT+CGG | + | chr1_3:5570375-5570394 | None:intergenic | 40.0% | |
AAATGGAAGGTGGAAATGGA+TGG | + | chr1_3:5570385-5570404 | None:intergenic | 40.0% | |
GGTTTCATCCAAAAATGCGA+CGG | - | chr1_3:5570485-5570504 | Msa0099420:three_prime_UTR | 40.0% | |
!! | TGAATCTCTGGTGCTGTTTA+TGG | - | chr1_3:5570523-5570542 | Msa0099420:three_prime_UTR | 40.0% |
AAGCTGTAATTCACGACGAA+AGG | - | chr1_3:5570571-5570590 | Msa0099420:exon | 40.0% | |
!! | CGGAGAGAGTTTTTGATTGA+TGG | - | chr1_3:5570702-5570721 | Msa0099420:intron | 40.0% |
!! | TGATTGATGGGTTTGATTCC+TGG | - | chr1_3:5570715-5570734 | Msa0099420:intron | 40.0% |
CATAGCTGACACCACTTATT+GGG | - | chr1_3:5571126-5571145 | Msa0099420:intron | 40.0% | |
TGACACCACTTATTGGGATA+AGG | - | chr1_3:5571132-5571151 | Msa0099420:intron | 40.0% | |
! | TTATTGGGATAAGGCTTGGT+TGG | - | chr1_3:5571141-5571160 | Msa0099420:intron | 40.0% |
GAGCAAAGTGAACTACTCTA+TGG | - | chr1_3:5571371-5571390 | Msa0099420:intron | 40.0% | |
! | TTGTTATGGCGATTTTGCGT+TGG | - | chr1_3:5571440-5571459 | Msa0099420:intron | 40.0% |
! | GATGGTAATGATGTGGAAGA+CGG | - | chr1_3:5571477-5571496 | Msa0099420:intron | 40.0% |
AGACCATGAGATTGTTAGGA+TGG | - | chr1_3:5571533-5571552 | Msa0099420:intron | 40.0% | |
GATCCATCCTAACAATCTCA+TGG | + | chr1_3:5571539-5571558 | None:intergenic | 40.0% | |
CTCTTGCATATGGTAAGAGA+CGG | - | chr1_3:5571570-5571589 | Msa0099420:intron | 40.0% | |
!!! | GTTTTGGGTATTGGAAATCG+TGG | - | chr1_3:5571918-5571937 | Msa0099420:CDS | 40.0% |
ATGCTCAATGCTGTAGCATT+CGG | + | chr1_3:5572054-5572073 | None:intergenic | 40.0% | |
GGCAATCTCTTTGTTAAGGT+AGG | - | chr1_3:5572107-5572126 | Msa0099420:CDS | 40.0% | |
!! | CTAAGCTGGCTTGATTCAAT+GGG | + | chr1_3:5572148-5572167 | None:intergenic | 40.0% |
!! | TCTAAGCTGGCTTGATTCAA+TGG | + | chr1_3:5572149-5572168 | None:intergenic | 40.0% |
!! | GAGGTTTTAACATTGGGAAG+AGG | - | chr1_3:5572205-5572224 | Msa0099420:CDS | 40.0% |
TTGAATACTGTTGCCAAGTG+TGG | + | chr1_3:5572302-5572321 | None:intergenic | 40.0% | |
! | TATGTGTCGGTCAAAGTTTG+AGG | + | chr1_3:5572408-5572427 | None:intergenic | 40.0% |
GCACAACATTGTCCTAATCT+TGG | - | chr1_3:5572687-5572706 | Msa0099420:intron | 40.0% | |
CACACCTCCAAAGATATGTT+TGG | + | chr1_3:5572735-5572754 | None:intergenic | 40.0% | |
!! | GTTTCTAGCTTTGTCTGACA+TGG | - | chr1_3:5572808-5572827 | Msa0099420:CDS | 40.0% |
! | TCTAAGACTTCATAGCTGTG+AGG | - | chr1_3:5572875-5572894 | Msa0099420:CDS | 40.0% |
CTAAGACTTCATAGCTGTGA+GGG | - | chr1_3:5572876-5572895 | Msa0099420:CDS | 40.0% | |
TGTCTGAATTCCCGAGTATT+AGG | - | chr1_3:5572984-5573003 | Msa0099420:intron | 40.0% | |
ATGTACTCGTCCTAATACTC+GGG | + | chr1_3:5572997-5573016 | None:intergenic | 40.0% | |
CATGTACTCGTCCTAATACT+CGG | + | chr1_3:5572998-5573017 | None:intergenic | 40.0% | |
! | TTTTGAATGGTTTCCTTGGC+AGG | - | chr1_3:5573252-5573271 | Msa0099420:intron | 40.0% |
TTGAAGTGATATTGATCCGG+TGG | + | chr1_3:5573343-5573362 | None:intergenic | 40.0% | |
ACCACAAAGGTCATCATTGA+GGG | + | chr1_3:5573433-5573452 | None:intergenic | 40.0% | |
AACCACAAAGGTCATCATTG+AGG | + | chr1_3:5573434-5573453 | None:intergenic | 40.0% | |
GAAATTAGCACTGCAAAAGC+AGG | - | chr1_3:5573459-5573478 | Msa0099420:intron | 40.0% | |
!!! | TGTGATGTTTTTAGTGACGG+TGG | - | chr1_3:5573565-5573584 | Msa0099420:intron | 40.0% |
ATCAGTAAGTTATGGCAGTG+TGG | + | chr1_3:5573819-5573838 | None:intergenic | 40.0% | |
CATTTCACCGACAAAATACC+AGG | + | chr1_3:5574141-5574160 | None:intergenic | 40.0% | |
TGTAGAGCTTGACTTCAGTT+CGG | - | chr1_3:5574217-5574236 | Msa0099420:intron | 40.0% | |
! | AATCGAAGTACTCAATAGGG+AGG | + | chr1_3:5574442-5574461 | None:intergenic | 40.0% |
! | TTGTGTCAGGGCTTTGTAAT+TGG | - | chr1_3:5574629-5574648 | Msa0099420:CDS | 40.0% |
! | TGTGTCAGGGCTTTGTAATT+GGG | - | chr1_3:5574630-5574649 | Msa0099420:CDS | 40.0% |
TTACACAAATTTCAGTGGGC+AGG | + | chr1_3:5574792-5574811 | None:intergenic | 40.0% | |
CACAGCCAATAAAAAGCAGT+TGG | + | chr1_3:5574815-5574834 | None:intergenic | 40.0% | |
!! | CCGTTTTTCATCTACTTCTC+AGG | - | chr1_3:5574937-5574956 | Msa0099420:intron | 40.0% |
GTCTTCGGTCTCTCAATTTA+GGG | - | chr1_3:5574963-5574982 | Msa0099420:intron | 40.0% | |
CCATTAACATCGCTTCAATG+CGG | + | chr1_3:5575012-5575031 | None:intergenic | 40.0% | |
!! | ATGGTCTCACTTGAGTTGAA+AGG | - | chr1_3:5575028-5575047 | Msa0099420:intron | 40.0% |
!! | TCACTTGAGTTGAAAGGATG+TGG | - | chr1_3:5575034-5575053 | Msa0099420:intron | 40.0% |
! | GATAAAGCATCACCTGCAAA+AGG | + | chr1_3:5575113-5575132 | None:intergenic | 40.0% |
TAAATTTGGGAGCCAATGCA+GGG | + | chr1_3:5575304-5575323 | None:intergenic | 40.0% | |
!!! | AGATTTGTTTTGAGGATGGG+AGG | + | chr1_3:5575480-5575499 | None:intergenic | 40.0% |
!!! | CCGTAGATTTGTTTTGAGGA+TGG | + | chr1_3:5575484-5575503 | None:intergenic | 40.0% |
CAGGAAAATGGAGATAGAAG+GGG | - | chr1_3:5575735-5575754 | Msa0099420:intron | 40.0% | |
AAAATGGAGATAGAAGGGGA+TGG | - | chr1_3:5575739-5575758 | Msa0099420:intron | 40.0% | |
GAAAAGAGTGAGAGGAAAAG+TGG | - | chr1_3:5575761-5575780 | Msa0099420:intron | 40.0% | |
ATTTCTCGGTCCACAGATTA+TGG | - | chr1_3:5575842-5575861 | Msa0099420:CDS | 40.0% | |
!! | CTTGAAGGTACTAAAGTTGC+AGG | - | chr1_3:5575925-5575944 | Msa0099420:CDS | 40.0% |
TCGCTTGAACCTCTTTACAA+GGG | - | chr1_3:5575971-5575990 | Msa0099420:CDS | 40.0% | |
CAGGAGTTGGATTTGTCTTA+TGG | - | chr1_3:5576013-5576032 | Msa0099420:intron | 40.0% | |
CGTTTAAACTCACACGTGTA+AGG | + | chr1_3:5576087-5576106 | None:intergenic | 40.0% | |
! | GTTTTCGTAGGAAGTTGCAA+TGG | + | chr1_3:5576188-5576207 | None:intergenic | 40.0% |
!! | TGACACATGGTTGTTTTCGT+AGG | + | chr1_3:5576200-5576219 | None:intergenic | 40.0% |
!! | GTTGAGGTTCTGAAGTAATC+GGG | + | chr1_3:5576236-5576255 | None:intergenic | 40.0% |
GGGTTGTCCAAATATTAGGA+AGG | - | chr1_3:5576261-5576280 | Msa0099420:intron | 40.0% | |
TCTGTCAGCTAATTTGAAGG+AGG | - | chr1_3:5576336-5576355 | Msa0099420:intron | 40.0% | |
! | TAGCTTGTCTCAATCTATGC+TGG | - | chr1_3:5576365-5576384 | Msa0099420:CDS | 40.0% |
! | ACCGATCCACATTCTTTTGA+GGG | + | chr1_3:5576413-5576432 | None:intergenic | 40.0% |
! | AACCGATCCACATTCTTTTG+AGG | + | chr1_3:5576414-5576433 | None:intergenic | 40.0% |
AACACAGACACACTCCTATT+TGG | + | chr1_3:5576837-5576856 | None:intergenic | 40.0% | |
! | AAATAGGAGTGTGTCTGTGT+TGG | - | chr1_3:5576836-5576855 | Msa0099420:CDS | 40.0% |
!! | GTGTTTTTGTCCCGATCTTT+TGG | - | chr1_3:5577030-5577049 | Msa0099420:intron | 40.0% |
GATAAACCAGCCAAAAGATC+GGG | + | chr1_3:5577043-5577062 | None:intergenic | 40.0% | |
GGATAAACCAGCCAAAAGAT+CGG | + | chr1_3:5577044-5577063 | None:intergenic | 40.0% | |
GCCCATTCTTAAAAAGCAGA+CGG | + | chr1_3:5577065-5577084 | None:intergenic | 40.0% | |
TATGCATTTGCTCTCACCTT+AGG | + | chr1_3:5577399-5577418 | None:intergenic | 40.0% | |
AAATTTCGTGCAGCATGTTC+TGG | - | chr1_3:5577548-5577567 | Msa0099420:CDS | 40.0% | |
! | TTTTGTGGTGCTTGTTCACT+TGG | - | chr1_3:5577630-5577649 | Msa0099420:CDS | 40.0% |
AGGCACACTTGGCAATAAAT+CGG | - | chr1_3:5577658-5577677 | Msa0099420:exon | 40.0% | |
! | CTTGCATTTTACGATGCATG+CGG | - | chr1_3:5577934-5577953 | Msa0099420:five_prime_UTR | 40.0% |
AGAAAGTGAGGGGAAATGGA+AGG | + | chr1_3:5570398-5570417 | None:intergenic | 45.0% | |
AGAGAGAAAGTGAGGGGAAA+TGG | + | chr1_3:5570402-5570421 | None:intergenic | 45.0% | |
GGTGAATTGGAGAGAGAAAG+GGG | + | chr1_3:5570428-5570447 | None:intergenic | 45.0% | |
GGGTGAATTGGAGAGAGAAA+GGG | + | chr1_3:5570429-5570448 | None:intergenic | 45.0% | |
AGGGTGAATTGGAGAGAGAA+AGG | + | chr1_3:5570430-5570449 | None:intergenic | 45.0% | |
!! | AGGTGTCAACTTGTTGAACC+TGG | - | chr1_3:5570591-5570610 | Msa0099420:CDS | 45.0% |
TCATCAGCAACAGGACTTTC+CGG | + | chr1_3:5570807-5570826 | None:intergenic | 45.0% | |
CACGCTTATGAGACGAATCA+CGG | + | chr1_3:5570833-5570852 | None:intergenic | 45.0% | |
! | CCAATAAGTGGTGTCAGCTA+TGG | + | chr1_3:5571128-5571147 | None:intergenic | 45.0% |
CCATAGCTGACACCACTTAT+TGG | - | chr1_3:5571125-5571144 | Msa0099420:intron | 45.0% | |
! | CCAAGCCTTATCCCAATAAG+TGG | + | chr1_3:5571140-5571159 | None:intergenic | 45.0% |
CCACTTATTGGGATAAGGCT+TGG | - | chr1_3:5571137-5571156 | Msa0099420:intron | 45.0% | |
! | TGGTGAGGATGGTAATGATG+TGG | - | chr1_3:5571470-5571489 | Msa0099420:intron | 45.0% |
TTACAGTCGAGGACATGTGT+AGG | - | chr1_3:5572022-5572041 | Msa0099420:CDS | 45.0% | |
! | GCTACAGCATTGAGCATATC+AGG | - | chr1_3:5572057-5572076 | Msa0099420:CDS | 45.0% |
AAATCAGCTGGAGTCTAAGC+TGG | + | chr1_3:5572162-5572181 | None:intergenic | 45.0% | |
ACATTGGGAAGAGGACAGAT+AGG | - | chr1_3:5572214-5572233 | Msa0099420:CDS | 45.0% | |
CATTGGGAAGAGGACAGATA+GGG | - | chr1_3:5572215-5572234 | Msa0099420:CDS | 45.0% | |
ATTGGGAAGAGGACAGATAG+GGG | - | chr1_3:5572216-5572235 | Msa0099420:CDS | 45.0% | |
CAAGATGACACAGTCTCTCA+TGG | + | chr1_3:5572339-5572358 | None:intergenic | 45.0% | |
GTGTCATGCGAATACAAGTC+AGG | - | chr1_3:5572374-5572393 | Msa0099420:intron | 45.0% | |
GTTACTGCGCTTCAATGACA+TGG | + | chr1_3:5572499-5572518 | None:intergenic | 45.0% | |
GTCATTGAAGCGCAGTAACA+TGG | - | chr1_3:5572500-5572519 | Msa0099420:intron | 45.0% | |
TGTCCAGCTTCACTAGTTGA+GGG | + | chr1_3:5572623-5572642 | None:intergenic | 45.0% | |
ATGTCCAGCTTCACTAGTTG+AGG | + | chr1_3:5572624-5572643 | None:intergenic | 45.0% | |
CTGCCCAAACATATCTTTGG+AGG | - | chr1_3:5572728-5572747 | Msa0099420:intron | 45.0% | |
AGCTCACAGTTCTATGTTGG+AGG | - | chr1_3:5572926-5572945 | Msa0099420:CDS | 45.0% | |
CATGATATCACTGCCAATGC+AGG | - | chr1_3:5573014-5573033 | Msa0099420:intron | 45.0% | |
! | ATCACTGCCAATGCAGGTTT+TGG | - | chr1_3:5573020-5573039 | Msa0099420:intron | 45.0% |
TCAAGCTCCAAAACCTGCAT+TGG | + | chr1_3:5573030-5573049 | None:intergenic | 45.0% | |
!! | TCTATTGACTTCGGTGTCGT+TGG | - | chr1_3:5573059-5573078 | Msa0099420:intron | 45.0% |
TCAAATCTGCTAACCTGCCA+AGG | + | chr1_3:5573268-5573287 | None:intergenic | 45.0% | |
!!! | GATGTTTTTAGTGACGGTGG+AGG | - | chr1_3:5573568-5573587 | Msa0099420:intron | 45.0% |
GTGTGGAAAGGATCAAGAGT+AGG | + | chr1_3:5573749-5573768 | None:intergenic | 45.0% | |
GCTCAAGAGTAGTAACTGCT+CGG | + | chr1_3:5574284-5574303 | None:intergenic | 45.0% | |
TGAGCTAACATGCCCTTATC+TGG | - | chr1_3:5574299-5574318 | Msa0099420:intron | 45.0% | |
AACATGCCCTTATCTGGAGA+AGG | - | chr1_3:5574305-5574324 | Msa0099420:intron | 45.0% | |
CTGGAGAAGGTCATATTGGA+TGG | - | chr1_3:5574318-5574337 | Msa0099420:intron | 45.0% | |
CAAATTTCAGTGGGCAGGTT+GGG | + | chr1_3:5574787-5574806 | None:intergenic | 45.0% | |
ACAAATTTCAGTGGGCAGGT+TGG | + | chr1_3:5574788-5574807 | None:intergenic | 45.0% | |
!! | CTACTTCTCAGGTTGGTCTT+CGG | - | chr1_3:5574948-5574967 | Msa0099420:intron | 45.0% |
GGTCTTCGGTCTCTCAATTT+AGG | - | chr1_3:5574962-5574981 | Msa0099420:intron | 45.0% | |
CCGCATTGAAGCGATGTTAA+TGG | - | chr1_3:5575009-5575028 | Msa0099420:intron | 45.0% | |
!! | CTTGAGTTGAAAGGATGTGG+TGG | - | chr1_3:5575037-5575056 | Msa0099420:intron | 45.0% |
TTGTCCTCTCTTGACATCAC+TGG | - | chr1_3:5575081-5575100 | Msa0099420:CDS | 45.0% | |
! | ACTCAATTAGTGGACAGGCA+CGG | + | chr1_3:5575233-5575252 | None:intergenic | 45.0% |
TTAATGTCCTGCCCATCGAT+TGG | - | chr1_3:5575261-5575280 | Msa0099420:CDS | 45.0% | |
! | TAATGTCCTGCCCATCGATT+GGG | - | chr1_3:5575262-5575281 | Msa0099420:CDS | 45.0% |
GTCCATCTAACCCAATCGAT+GGG | + | chr1_3:5575275-5575294 | None:intergenic | 45.0% | |
AGTCCATCTAACCCAATCGA+TGG | + | chr1_3:5575276-5575295 | None:intergenic | 45.0% | |
CTAAATTTGGGAGCCAATGC+AGG | + | chr1_3:5575305-5575324 | None:intergenic | 45.0% | |
GTCGCTTGAACCTCTTTACA+AGG | - | chr1_3:5575970-5575989 | Msa0099420:CDS | 45.0% | |
CTTGAACCTCTTTACAAGGG+TGG | - | chr1_3:5575974-5575993 | Msa0099420:CDS | 45.0% | |
! | AAAGCACCACCCTTGTAAAG+AGG | + | chr1_3:5575983-5576002 | None:intergenic | 45.0% |
TTTACCAGCTCTTCAGGAGT+TGG | - | chr1_3:5576000-5576019 | Msa0099420:intron | 45.0% | |
AAATCCAACTCCTGAAGAGC+TGG | + | chr1_3:5576007-5576026 | None:intergenic | 45.0% | |
ATGCTTATGCCAGGTAACTC+AGG | + | chr1_3:5576160-5576179 | None:intergenic | 45.0% | |
ATGGATAGGATGCTTATGCC+AGG | + | chr1_3:5576169-5576188 | None:intergenic | 45.0% | |
CGTAGGAAGTTGCAATGGAT+AGG | + | chr1_3:5576183-5576202 | None:intergenic | 45.0% | |
TGGGTTGCTCATTTGACACA+TGG | + | chr1_3:5576213-5576232 | None:intergenic | 45.0% | |
!! | AGGTTCTGAAGTAATCGGGT+GGG | + | chr1_3:5576232-5576251 | None:intergenic | 45.0% |
! | GCGTGGGTTGTCCAAATATT+AGG | - | chr1_3:5576257-5576276 | Msa0099420:intron | 45.0% |
! | CCGATCCACATTCTTTTGAG+GGG | + | chr1_3:5576412-5576431 | None:intergenic | 45.0% |
CCCCTCAAAAGAATGTGGAT+CGG | - | chr1_3:5576409-5576428 | Msa0099420:CDS | 45.0% | |
CTTCAGCAACTGTTCCTCAT+TGG | - | chr1_3:5576472-5576491 | Msa0099420:intron | 45.0% | |
ATTCACGAGTCCTACCACTT+AGG | - | chr1_3:5576731-5576750 | Msa0099420:CDS | 45.0% | |
GAGTCCTACCACTTAGGAAA+TGG | - | chr1_3:5576737-5576756 | Msa0099420:CDS | 45.0% | |
GGAACCATTTCCTAAGTGGT+AGG | + | chr1_3:5576744-5576763 | None:intergenic | 45.0% | |
ACTGGGAACCATTTCCTAAG+TGG | + | chr1_3:5576748-5576767 | None:intergenic | 45.0% | |
! | TTTTGTCCCGATCTTTTGGC+TGG | - | chr1_3:5577034-5577053 | Msa0099420:intron | 45.0% |
TTAGGCGTGCAATATTGACG+AGG | - | chr1_3:5577311-5577330 | Msa0099420:intron | 45.0% | |
TGATGTTCGCTTCTGTCCTA+AGG | - | chr1_3:5577380-5577399 | Msa0099420:CDS | 45.0% | |
CAGATAAGCTCAGCGAGTAT+GGG | - | chr1_3:5577524-5577543 | Msa0099420:CDS | 45.0% | |
TGCTTGTTCACTTGGAGAGA+AGG | - | chr1_3:5577638-5577657 | Msa0099420:CDS | 45.0% | |
GGCACACTTGGCAATAAATC+GGG | - | chr1_3:5577659-5577678 | Msa0099420:exon | 45.0% | |
!!! | ATTTTTTTATTTTATGTTTT+TGG | - | chr1_3:5575626-5575645 | Msa0099420:CDS | 5.0% |
!!! | TTTATTTTTTTTAAATTGTA+AGG | - | chr1_3:5577185-5577204 | Msa0099420:intron | 5.0% |
GATCGGATCTTGGAGGAAGA+TGG | + | chr1_3:5570358-5570377 | None:intergenic | 50.0% | |
TGGATCTGATCGGATCTTGG+AGG | + | chr1_3:5570365-5570384 | None:intergenic | 50.0% | |
GGATGGATCTGATCGGATCT+TGG | + | chr1_3:5570368-5570387 | None:intergenic | 50.0% | |
GGGGAAATGGAAGGTGGAAA+TGG | + | chr1_3:5570389-5570408 | None:intergenic | 50.0% | |
AAGTGAGGGGAAATGGAAGG+TGG | + | chr1_3:5570395-5570414 | None:intergenic | 50.0% | |
GGGTAGAGAGAGAAAGTGAG+GGG | + | chr1_3:5570408-5570427 | None:intergenic | 50.0% | |
GGGGTAGAGAGAGAAAGTGA+GGG | + | chr1_3:5570409-5570428 | None:intergenic | 50.0% | |
AGGGGTAGAGAGAGAAAGTG+AGG | + | chr1_3:5570410-5570429 | None:intergenic | 50.0% | |
! | GTGACGATCCGTCGCATTTT+TGG | + | chr1_3:5570496-5570515 | None:intergenic | 50.0% |
GTCACTCACGCATGAATCTC+TGG | - | chr1_3:5570511-5570530 | Msa0099420:three_prime_UTR | 50.0% | |
TCGTCGTCGTTGTTCATACC+AGG | + | chr1_3:5570612-5570631 | None:intergenic | 50.0% | |
TTGATTCCTGGCCTGCTGTA+CGG | - | chr1_3:5570727-5570746 | Msa0099420:intron | 50.0% | |
ACCGGAATTCGGGATTACAG+CGG | + | chr1_3:5570784-5570803 | None:intergenic | 50.0% | |
TGTAATCCCGAATTCCGGTC+CGG | - | chr1_3:5570785-5570804 | Msa0099420:intron | 50.0% | |
TCACGGTTCTCATCAGCAAC+AGG | + | chr1_3:5570816-5570835 | None:intergenic | 50.0% | |
!! | GATTTTGCGTTGGTGTGTGG+TGG | - | chr1_3:5571450-5571469 | Msa0099420:intron | 50.0% |
GGTAATGATGTGGAAGACGG+TGG | - | chr1_3:5571480-5571499 | Msa0099420:intron | 50.0% | |
AATGATGTGGAAGACGGTGG+AGG | - | chr1_3:5571483-5571502 | Msa0099420:intron | 50.0% | |
ATGATGTGGAAGACGGTGGA+GGG | - | chr1_3:5571484-5571503 | Msa0099420:intron | 50.0% | |
CTGCCAGAGTTTGTAAGCAG+TGG | - | chr1_3:5571745-5571764 | Msa0099420:intron | 50.0% | |
CCAGAGTTTGTAAGCAGTGG+CGG | - | chr1_3:5571748-5571767 | Msa0099420:intron | 50.0% | |
CAGAGTTTGTAAGCAGTGGC+GGG | - | chr1_3:5571749-5571768 | Msa0099420:intron | 50.0% | |
ATGCCCTCAACTAGTGAAGC+TGG | - | chr1_3:5572617-5572636 | Msa0099420:intron | 50.0% | |
CTAACTGCTCTGTACTCCAC+CGG | - | chr1_3:5573324-5573343 | Msa0099420:intron | 50.0% | |
GCCCTCAATGATGACCTTTG+TGG | - | chr1_3:5573429-5573448 | Msa0099420:intron | 50.0% | |
AAGGGAGAGACTGACTAACG+AGG | + | chr1_3:5574253-5574272 | None:intergenic | 50.0% | |
TCGTTAGTCAGTCTCTCCCT+TGG | - | chr1_3:5574252-5574271 | Msa0099420:intron | 50.0% | |
TTAGTCAGTCTCTCCCTTGG+TGG | - | chr1_3:5574255-5574274 | Msa0099420:intron | 50.0% | |
TTCCTAGAGGAGGTTGTGTC+AGG | - | chr1_3:5574616-5574635 | Msa0099420:CDS | 50.0% | |
TCCTAGAGGAGGTTGTGTCA+GGG | - | chr1_3:5574617-5574636 | Msa0099420:CDS | 50.0% | |
! | GGGCTTTGTAATTGGGACCA+CGG | - | chr1_3:5574637-5574656 | Msa0099420:CDS | 50.0% |
GCATCCAGTGATGTCAAGAG+AGG | + | chr1_3:5575088-5575107 | None:intergenic | 50.0% | |
! | CACTGGATGCTTCCTTTTGC+AGG | - | chr1_3:5575098-5575117 | Msa0099420:CDS | 50.0% |
! | CTCAATTAGTGGACAGGCAC+GGG | + | chr1_3:5575232-5575251 | None:intergenic | 50.0% |
ATCTAACCCAATCGATGGGC+AGG | + | chr1_3:5575271-5575290 | None:intergenic | 50.0% | |
! | TGCCCATCGATTGGGTTAGA+TGG | - | chr1_3:5575270-5575289 | Msa0099420:CDS | 50.0% |
ATGGACTCTGTTCCCTGCAT+TGG | - | chr1_3:5575289-5575308 | Msa0099420:CDS | 50.0% | |
!!! | TGTTTTGAGGATGGGAGGAG+CGG | + | chr1_3:5575475-5575494 | None:intergenic | 50.0% |
AGGGGATGGAAAAGAGTGAG+AGG | - | chr1_3:5575753-5575772 | Msa0099420:intron | 50.0% | |
AAGAGGTTCAAGCGACGAGT+CGG | + | chr1_3:5575966-5575985 | None:intergenic | 50.0% | |
TGGTGCTTTACCAGCTCTTC+AGG | - | chr1_3:5575994-5576013 | Msa0099420:intron | 50.0% | |
! | TTAAACTGGGGGCACAGTCA+AGG | - | chr1_3:5576127-5576146 | Msa0099420:CDS | 50.0% |
! | TAAACTGGGGGCACAGTCAA+GGG | - | chr1_3:5576128-5576147 | Msa0099420:CDS | 50.0% |
GGGAAGTTTCCTGAGTTACC+TGG | - | chr1_3:5576148-5576167 | Msa0099420:CDS | 50.0% | |
!! | GAGGTTCTGAAGTAATCGGG+TGG | + | chr1_3:5576233-5576252 | None:intergenic | 50.0% |
ACTTCAGAACCTCAACTGCG+TGG | - | chr1_3:5576240-5576259 | Msa0099420:intron | 50.0% | |
CTTCAGAACCTCAACTGCGT+GGG | - | chr1_3:5576241-5576260 | Msa0099420:intron | 50.0% | |
! | TGGGAACAGTGTGCTGTTGA+TGG | + | chr1_3:5576295-5576314 | None:intergenic | 50.0% |
GTTCGCCCCTCAAAAGAATG+TGG | - | chr1_3:5576404-5576423 | Msa0099420:CDS | 50.0% | |
GCAGATAAGCTCAGCGAGTA+TGG | - | chr1_3:5577523-5577542 | Msa0099420:CDS | 50.0% | |
! | ACTTGGAGAGAAGGCACACT+TGG | - | chr1_3:5577647-5577666 | Msa0099420:CDS | 50.0% |
GCCGCTGTAATCCCGAATTC+CGG | - | chr1_3:5570780-5570799 | Msa0099420:intron | 55.0% | |
GACTTTCCGGACCGGAATTC+GGG | + | chr1_3:5570794-5570813 | None:intergenic | 55.0% | |
GGACTTTCCGGACCGGAATT+CGG | + | chr1_3:5570795-5570814 | None:intergenic | 55.0% | |
AGCAACAGGACTTTCCGGAC+CGG | + | chr1_3:5570802-5570821 | None:intergenic | 55.0% | |
!! | GGCGATTTTGCGTTGGTGTG+TGG | - | chr1_3:5571447-5571466 | Msa0099420:intron | 55.0% |
! | TTGGTGTGTGGTGGTGAGGA+TGG | - | chr1_3:5571459-5571478 | Msa0099420:intron | 55.0% |
CCGCCACTGCTTACAAACTC+TGG | + | chr1_3:5571751-5571770 | None:intergenic | 55.0% | |
GCTGCACGAATAGCAGCATC+AGG | + | chr1_3:5572588-5572607 | None:intergenic | 55.0% | |
GGGCATCACTTCTGCGTCAA+TGG | - | chr1_3:5572896-5572915 | Msa0099420:CDS | 55.0% | |
AACTGCTCGGCAACCACCAA+GGG | + | chr1_3:5574271-5574290 | None:intergenic | 55.0% | |
TAACTGCTCGGCAACCACCA+AGG | + | chr1_3:5574272-5574291 | None:intergenic | 55.0% | |
AAACAGGCTGCAGAGTCACC+AGG | + | chr1_3:5575353-5575372 | None:intergenic | 55.0% | |
TTGGACAACCCACGCAGTTG+AGG | + | chr1_3:5576252-5576271 | None:intergenic | 55.0% | |
GGCGTGCAATATTGACGAGG+AGG | - | chr1_3:5577314-5577333 | Msa0099420:intron | 55.0% | |
! | TGCGTTGGTGTGTGGTGGTG+AGG | - | chr1_3:5571455-5571474 | Msa0099420:intron | 60.0% |
GCCCTGACACAACCTCCTCT+AGG | + | chr1_3:5574621-5574640 | None:intergenic | 60.0% | |
CCTGCTGTACGGCGCTCGAT+CGG | - | chr1_3:5570738-5570757 | Msa0099420:intron | 65.0% | |
! | CCGATCGAGCGCCGTACAGC+AGG | + | chr1_3:5570741-5570760 | None:intergenic | 70.0% |
! | CGAGCGCCGTACAGCAGGCC+AGG | + | chr1_3:5570736-5570755 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 5570203 | 5577994 | 5570203 | ID=Msa0099420;Name=Msa0099420 |
chr1_3 | mRNA | 5570203 | 5577994 | 5570203 | ID=Msa0099420-mRNA-1;Parent=Msa0099420;Name=Msa0099420-mRNA-1;_AED=0.25;_eAED=0.25;_QI=319|1|1|1|1|1|17|381|986 |
chr1_3 | exon | 5570203 | 5570670 | 5570203 | ID=Msa0099420-mRNA-1:exon:2093;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5570796 | 5570882 | 5570796 | ID=Msa0099420-mRNA-1:exon:2092;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5571656 | 5571719 | 5571656 | ID=Msa0099420-mRNA-1:exon:2091;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5571799 | 5572265 | 5571799 | ID=Msa0099420-mRNA-1:exon:2090;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5572802 | 5573000 | 5572802 | ID=Msa0099420-mRNA-1:exon:2089;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5573078 | 5573238 | 5573078 | ID=Msa0099420-mRNA-1:exon:2088;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5573823 | 5573975 | 5573823 | ID=Msa0099420-mRNA-1:exon:2087;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5574567 | 5574737 | 5574567 | ID=Msa0099420-mRNA-1:exon:2086;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5574824 | 5574923 | 5574824 | ID=Msa0099420-mRNA-1:exon:2085;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5575073 | 5575161 | 5575073 | ID=Msa0099420-mRNA-1:exon:2084;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5575250 | 5575348 | 5575250 | ID=Msa0099420-mRNA-1:exon:2083;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5575448 | 5575718 | 5575448 | ID=Msa0099420-mRNA-1:exon:2082;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5575802 | 5575999 | 5575802 | ID=Msa0099420-mRNA-1:exon:2081;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5576073 | 5576169 | 5576073 | ID=Msa0099420-mRNA-1:exon:2080;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5576357 | 5576489 | 5576357 | ID=Msa0099420-mRNA-1:exon:2079;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5576616 | 5576856 | 5576616 | ID=Msa0099420-mRNA-1:exon:2078;Parent=Msa0099420-mRNA-1 |
chr1_3 | exon | 5577332 | 5577994 | 5577332 | ID=Msa0099420-mRNA-1:exon:2077;Parent=Msa0099420-mRNA-1 |
chr1_3 | five_prime_UTR | 5577676 | 5577994 | 5577676 | ID=Msa0099420-mRNA-1:five_prime_utr;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5577332 | 5577675 | 5577332 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5576616 | 5576856 | 5576616 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5576357 | 5576489 | 5576357 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5576073 | 5576169 | 5576073 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5575802 | 5575999 | 5575802 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5575448 | 5575718 | 5575448 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5575250 | 5575348 | 5575250 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5575073 | 5575161 | 5575073 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5574824 | 5574923 | 5574824 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5574567 | 5574737 | 5574567 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5573823 | 5573975 | 5573823 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5573078 | 5573238 | 5573078 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5572802 | 5573000 | 5572802 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5571799 | 5572265 | 5571799 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5571656 | 5571719 | 5571656 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5570796 | 5570882 | 5570796 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | CDS | 5570584 | 5570670 | 5570584 | ID=Msa0099420-mRNA-1:cds;Parent=Msa0099420-mRNA-1 |
chr1_3 | three_prime_UTR | 5570203 | 5570583 | 5570203 | ID=Msa0099420-mRNA-1:three_prime_utr;Parent=Msa0099420-mRNA-1 |
Gene Sequence |
Protein sequence |